RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101977

Ensembl transcript IDs: ENST00000338585.6, ENST00000370573.8, ENST00000370576.9, ENST00000414978.5, ENST00000437564.5, ENST00000446225.5, ENST00000483690.1, ENST00000519895.5, ENST00000520602.6, ENST00000536274.5

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATaGCCCGAAAAGAATTTCTGGGCTTTGTATTGTTTCACACAAGTT +
Preference number: 1 (lower is better)
Translates to: LSGHIQTVALNKIYS*PEKNFWALYCFTQV
Trigger: AACTTGTGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAACATCTGCATCATTTaGGCTCAATGTCTTTTGCGC +
Preference number: 2 (lower is better)
Translates to: LSGHIQTVALNKIYSCPENICII*AQCLLR
Trigger: GCGCAAAAGACATTGAGCTCAAATGATGCAGATGTT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGCGTGTCCATTAACCTaGAAACAACATCTGCATCAT +
Preference number: 2 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRACPLT*KQHLHH
Trigger: ATGATGCAGATGTTGTTTTCAGGTTAATGGACACGC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 2 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGAGCTCAATGTCTTTTaGGCAGTATTTTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRELNVF*AVFFQM
Trigger: CATTTGGAAAAATACTGCGCAAAAGACATTGAGCTC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGAGCTCAATGTCTTTTaGGCAGTATTTTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEELNVF*AVFFQM
Trigger: CATTTGGAAAAATACTGCGCAAAAGACATTGAGCTC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATGGGCACAAAAGCTGTaGTTTCAACAAAAGCATATT +
Preference number: 2 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRWAQKL*FQQKHI
Trigger: AATATGCTTTTGTTGAAACCACAGCTTTTGTGCCCA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATGGGCACAAAAGCTGTaGTTTCAACAAAAGCATATT +
Preference number: 2 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEWAQKL*FQQKHI
Trigger: AATATGCTTTTGTTGAAACCACAGCTTTTGTGCCCA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACACAAGTTAAAACAATaGGCACAAAAGCTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEHKLKQ*AQKLWF
Trigger: AAACCACAGCTTTTGTGCCCATTGTTTTAACTTGTG...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGCGTGTCCATTAACCTaGAAACAACATCTGCATCAT +
Preference number: 2 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVACPLT*KQHLHH
Trigger: ATGATGCAGATGTTGTTTTCAGGTTAATGGACACGC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAACATCTGCATCATTTaGGCTCAATGTCTTTTGCGC +
Preference number: 2 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKNICII*AQCLLR
Trigger: GCGCAAAAGACATTGAGCTCAAATGATGCAGATGTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGAGCTCAATGTCTTTTaGGCAGTATTTTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: YVLWFLCVSINLKTTSASELNVF*AVFFQM
Trigger: CATTTGGAAAAATACTGCGCAAAAGACATTGAGCTC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGAGCTCAATGTCTTTTaGGCAGTATTTTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAELNVF*AVFFQM
Trigger: CATTTGGAAAAATACTGCGCAAAAGACATTGAGCTC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAACATCTGCATCATTTaGGCTCAATGTCTTTTGCGC +
Preference number: 2 (lower is better)
Translates to: KLNNPRHTDCIWLQSREENICII*AQCLLR
Trigger: GCGCAAAAGACATTGAGCTCAAATGATGCAGATGTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGAGCTCAATGTCTTTTaGGCAGTATTTTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEELNVF*AVFFQM
Trigger: CATTTGGAAAAATACTGCGCAAAAGACATTGAGCTC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
3UTR TCA 72 bp TTGAGCTCAATGTCTTTTGCGCAGTATTTTTCCAAATaGGCTGAGAAGCAGGCAGGAAAGAGCTACTTGCCA +
Preference number: 3 (lower is better)
Translates to: LSSMSFAQYFSK*AEKQAGKSYLP
Trigger: TGGCAAGTAGCTCTTTCCTGCCTGCTTCTCAGCTCATTTGGAAAAATACTGCGCAAAAGACATTGAGCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
3UTR-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 3 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 3 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
3UTR-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATACAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 3 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACGCGCTGCAGGGCCATaGCCATGTCCACCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPERAAGP*PCPPAE
Trigger: CTCTGCAGGTGGACATGGCCATGGCCCTGCAGCGCG...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGCAATCCTCACGCGCTaGAGGGCCATGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEAILTR*RAMAMS
Trigger: GGACATGGCCATGGCCCTGCAGCGCGTGAGGATTGC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGCAGCTTGGGGCATGTaGCTGGCCGCCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKAAWGM*LAARLG
Trigger: GCCAAGGCGGGCGGCCAGGCACATGCCCCAAGCTGC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR CCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGGCCGAAGCGGCAGCTTaGGGCATGTGCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLAEAAA*GMCLAA
Trigger: GGCGGCCAGGCACATGCCCCAAGCTGCCGCTTCGGC...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCTGCCGCAGGACACTaGGGTCCACGGCGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPAAGH*GPRRRS
Trigger: GCTTCGGCGCCGTGGACCTCAGTGTCCTGCGGCAGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACTTGGGGCATGTGCCTaGCCGCCCGCCTTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTLGACA*PPALAN
Trigger: GTTCGCCAAGGCGGGCGGCCAGGCACATGCCCCAAG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGGCAGTACTGCAAGGTaGCGCCTAACTCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRGSTAR*RLTQGL
Trigger: TAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGCCTCTCCGGGGATTTaGTTCTGCCATTTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEASPGI*FCHFAC
Trigger: ACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGCCGCATTCCTTCTaGACCTCATCTTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRKPHSF*TSSCLS
Trigger: GGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATGCTTCTGCCTGAACTaGCGCAATTGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRCFCLN*RNCLTD
Trigger: GTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATCACTGTGGCAGTACTaGAAGGTGCCGCCTAACTCA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRSLWQY*KVPPNS
Trigger: TGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATTCTGCCACGAAGACTaGTTGCAGGAGGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRFCHED*LQEAEV
Trigger: TACCTCTGCCTCCTGCAAGCAGTCTTCGTGGCAGAA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGAGCAGATCGGTTTCTaGCACGAAGACTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEEQIGF*HEDCLQ
Trigger: CTGCAAGCAGTCTTCGTGGCAGAAACCGATCTGCTC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACTTCCATTAGCACAGTaGCAGCAATGCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRLPLAQ*QQCWGG
Trigger: TCCTCCCCAGCATTGCTGCCACTGTGCTAATGGAAG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGGCAGTACTGCAAGGTaGCGCCTAACTCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAGSTAR*RLTQGL
Trigger: TAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGGCAGTACTGCAAGGTaGCGCCTAACTCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASGSTAR*RLTQGL
Trigger: TAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGACCTCCACCACAGTaGTGGTGTGTTCCAATTCAG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPERPPPQ*WCVPIQ
Trigger: CTGAATTGGAACACACCAGCACTGTGGTGGAGGTCT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGACCTCCACCACAGTaGTGGTGTGTTCCAATTCAG +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRRPPPQ*WCVPIQ
Trigger: CTGAATTGGAACACACCAGCACTGTGGTGGAGGTCT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAATGATCCATTCACTGTaGCAGTACTGCAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEMIHSL*QYCKVP
Trigger: CGGCACCTTGCAGTACTGCCACAGTGAATGGATCAT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAAGCCGCATTCCTTCTaGACCTCATCTTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASKPHSF*TSSCLS
Trigger: GGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCCTTCATCACAGCATTaGCGAGCCTGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFPSSQH*RACCRS
Trigger: ACTCCTACAGCAGGCTCGTCAATGCTGTGATGAAGG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATATCTGCCAGGTTCCTaGAACCAGCCTGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASYLPGS*NQPAGS
Trigger: AGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATGGTGTCCCAGATGTaGCCAAATTTTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRMVSQM*PNFQVW
Trigger: CCACACCTGAAAATTTGGTCACATCTGGGACACCAT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGAACTTCTCTTCTCCTaGCAATCAGGCACCACTTCA +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEELLFS*QSGTTS
Trigger: TGAAGTGGTGCCTGATTGTCAGGAGAAGAGAAGTTC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRTLSGA*AQFSRL
Trigger: CAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGCCCTATCCAAACGCTaGATCCACCTTGCATTATCA +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEALSKR*IHLALS
Trigger: TGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTGCTTCTGCCTGAACTaGCGCAATTGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFCFCLN*RNCLTD
Trigger: GTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATGCTTCTGCCTGAACTaGCGCAATTGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSACFCLN*RNCLTD
Trigger: GTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGTATTTGCTTCTGCCTaGACTGACGCAATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEVFASA*TDAIAS
Trigger: TGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATAC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCCTGGGCTATCGGCATaGAAGTGCAGCCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLPGLSA*KCSHLG
Trigger: ACCCAGATGGCTGCACTTTCATGCCGATAGCCCAGG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACTGTGGCAGTACTaGAAGGTGCCGCCTAACTCA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSASLWQY*KVPPNS
Trigger: TGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACAGCATTGCATCGAGTaGCTTCTTCAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRQHCIE*LLQQSR
Trigger: TCTGCTCTGTTGAAGAAGGCACTCGATGCAATGCTG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATGGCCATGTCCACCTaGAGAGGGATCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEMAMST*RGIAWA
Trigger: AGCCCAGGCGATCCCTCTGCAGGTGGACATGGCCAT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATGCCATTGTCCAAACTaGAGGATGGACCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRCHCPN*RMDQNF
Trigger: GAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACCTCCACCACAGTGCTaGTGTGTTCCAATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEPPPQC*CVPIQF
Trigger: AAACTGAATTGGAACACACCAGCACTGTGGTGGAGG...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACCTCCACCACAGTGCTaGTGTGTTCCAATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRPPPQC*CVPIQF
Trigger: AAACTGAATTGGAACACACCAGCACTGTGGTGGAGG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACTTCCATTAGCACAGTaGCAGCAATGCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSALPLAQ*QQCWGG
Trigger: TCCTCCCCAGCATTGCTGCCACTGTGCTAATGGAAG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTATCTGCCAGGTTCCTaGAACCAGCCTGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVYLPGS*NQPAGS
Trigger: AGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGTGTTTAAAACTGTATaGCGGGTATCTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRVFKTV*RVSVRA
Trigger: GGCTCTGACAGATACCCGTCATACAGTTTTAAACAC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACCGACACAGGTCTCATaGGGGGCCTATTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASPTQVS*GAYFLL
Trigger: AAGAAGAAAATAGGCCCCTCATGAGACCTGTGTCGG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCCGACACAGGTCTCATaGGGGGCCTATTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFPTQVS*GAYFLL
Trigger: AAGAAGAAAATAGGCCCCTCATGAGACCTGTGTCGG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACCGACACAGGTCTCATaGGGGGCCTATTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAPTQVS*GAYFLL
Trigger: AAGAAGAAAATAGGCCCCTCATGAGACCTGTGTCGG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTCACTGTGGCAGTACTaGAAGGTGCCGCCTAACTCA +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVSLWQY*KVPPNS
Trigger: TGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAACGCTGAATCCACCTTaGATTATCATCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPETLNPP*IIILPS
Trigger: ACTGGGCAAGATGATAATGCAAGGTGGATTCAGCGT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAGACCTCCACCACAGTaGTGGTGTGTTCCAATTCAG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFRPPPQ*WCVPIQ
Trigger: CTGAATTGGAACACACCAGCACTGTGGTGGAGGTCT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTATGATCCATTCACTGTaGCAGTACTGCAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFMIHSL*QYCKVP
Trigger: CGGCACCTTGCAGTACTGCCACAGTGAATGGATCAT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGGTCCCACTCTTTCTaGAGCATGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPERSHSF*SMSTIF
Trigger: GAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAGGACTGTAACATCTaGGCCATTTCTTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEKDCNI*AISFTV
Trigger: CACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATCAGTCACAAGCTGTTaGAAATCCTGCTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPESVTSC*KSCSNF
Trigger: GAAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACCTTCATCACAGCATTaGCGAGCCTGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTPSSQH*RACCRS
Trigger: ACTCCTACAGCAGGCTCGTCAATGCTGTGATGAAGG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACCTTCATCACAGCATTaGCGAGCCTGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKPSSQH*RACCRS
Trigger: ACTCCTACAGCAGGCTCGTCAATGCTGTGATGAAGG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAATGGTGTCCCAGATGTaGCCAAATTTTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAMVSQM*PNFQVW
Trigger: CCACACCTGAAAATTTGGTCACATCTGGGACACCAT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTATGGTGTCCCAGATGTaGCCAAATTTTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFMVSQM*PNFQVW
Trigger: CCACACCTGAAAATTTGGTCACATCTGGGACACCAT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGAACTTCTCTTCTCCTaGCAATCAGGCACCACTTCA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAELLFS*QSGTTS
Trigger: TGAAGTGGTGCCTGATTGTCAGGAGAAGAGAAGTTC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSATLSGA*AQFSRL
Trigger: CAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFTLSGA*AQFSRL
Trigger: CAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGCCCTATCCAAACGCTaGATCCACCTTGCATTATCA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAALSKR*IHLALS
Trigger: TGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGCCCTATCCAAACGCTaGATCCACCTTGCATTATCA +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFALSKR*IHLALS
Trigger: TGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGTATTTGCTTCTGCCTaGACTGACGCAATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASVFASA*TDAIAS
Trigger: TGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATAC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTATTTGCTTCTGCCTaGACTGACGCAATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVFASA*TDAIAS
Trigger: TGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCCGACACAGGTCTCATaGGGGGCCTATTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVPTQVS*GAYFLL
Trigger: AAGAAGAAAATAGGCCCCTCATGAGACCTGTGTCGG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGCGTGTCCATTAACCTaGAAACAACATCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEACPLT*KQHLHH
Trigger: ATGATGCAGATGTTGTTTTCAGGTTAATGGACACGC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGGTAAACCGGGAGTCTaGTCCATTTTGCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASGKPGV*SILPCN
Trigger: ATTGCAAGGCAAAATGGATCAGACTCCCGGTTTACC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAACCAAAACCAAGTaGAAGTTCCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRKTKTK*KFPGKE
Trigger: TTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGGCAGTACTGCAAGGTaGCGCCTAACTCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEGSTAR*RLTQGL
Trigger: TAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATCACTGTGGCAGTACTaGAAGGTGCCGCCTAACTCA +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTSLWQY*KVPPNS
Trigger: TGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATGCATAATGGTGATTTaGTGCAAGCTTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRCIMVI*CKLVSM
Trigger: CATGGACACAAGCTTGCAGCAAATCACCATTATGCA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATGCATAATGGTGATTTaGTGCAAGCTTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPECIMVI*CKLVSM
Trigger: CATGGACACAAGCTTGCAGCAAATCACCATTATGCA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATGCTGTAGGAGTTTATaGATTTTGAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPECCRSL*ILKVLL
Trigger: CAGCAGGACCTTCAAAATGCATAAACTCCTACAGCA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTGGATTGGCCTCACATaGTTATCTGCCAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVWIGLT*LSARFL
Trigger: CAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCAGCATTGCATCGAGTaGCTTCTTCAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFQHCIE*LLQQSR
Trigger: TCTGCTCTGTTGAAGAAGGCACTCGATGCAATGCTG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACAGCATTGCATCGAGTaGCTTCTTCAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAQHCIE*LLQQSR
Trigger: TCTGCTCTGTTGAAGAAGGCACTCGATGCAATGCTG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAGAAAAGGTGTCGCTaGATTGGTTTGAATCTAGCC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEKKRCR*IGLNLA
Trigger: GGCTAGATTCAAACCAATGCAGCGACACCTTTTCTT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATTGTGGATTAGCTTGTaGTGGACTGCTCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPELWISL*WTAQED
Trigger: ATCTTCTTGAGCAGTCCAGCACAAGCTAATCCACAA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCCGGGGATTTGCTTCTaGCATTTCGCCTGTACGCAA +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLPGICF*HFACTQ
Trigger: TTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACCGGGGATTTGCTTCTaGCATTTCGCCTGTACGCAA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKPGICF*HFACTQ
Trigger: TTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR GCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGCCTCTCCGGGGATTTaGTTCTGCCATTTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIASPGI*FCHFAC
Trigger: ACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGCTCATTGCACCTCTaGCAGATTAAATCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPESSLHL*QIKSSA
Trigger: TGCACTTGATTTAATCTGCCAGAGGTGCAATGAGCT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATACCACAAATTGGATTaGCCTCACATGCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEYHKLD*PHMLIC
Trigger: GCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATACCACAAATTGGATTaGCCTCACATGCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRYHKLD*PHMLIC
Trigger: GCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGTCCAAACTGGAGGATaGACCAGAACTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFVQTGG*TRTSLL
Trigger: GAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGAC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAGGTGTCGCTGCATTaGTTTGAATCTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEKVSLH*FESSQI
Trigger: GATTTGGCTAGATTCAAACCAATGCAGCGACACCTT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACCTCCACCACAGTGCTaGTGTGTTCCAATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASPPPQC*CVPIQF
Trigger: AAACTGAATTGGAACACACCAGCACTGTGGTGGAGG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACCTCCACCACAGTGCTaGTGTGTTCCAATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAPPPQC*CVPIQF
Trigger: AAACTGAATTGGAACACACCAGCACTGTGGTGGAGG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATGCAGAGGGATCGCCTaGGCTATCGGCATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEICRGIA*AIGMKV
Trigger: CACTTTCATGCCGATAGCCCAGGCGATCCCTCTGCA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACAGCAAATCACTAACTaGGCTCAGCATAACAACTGG +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASQQITN*AQHNNW
Trigger: CCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFILVLN*QLLQCQ
Trigger: CTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAAT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCTTCATCACAGCATTaGCGAGCCTGCTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPSSQH*RACCRS
Trigger: ACTCCTACAGCAGGCTCGTCAATGCTGTGATGAAGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATATCTGCCAGGTTCCTaGAACCAGCCTGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIYLPGS*NQPAGS
Trigger: AGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATATCTGCCAGGTTCCTaGAACCAGCCTGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEYLPGS*NQPAGS
Trigger: AGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGCCCTATCCAAACGCTaGATCCACCTTGCATTATCA +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVALSKR*IHLALS
Trigger: TGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTGTTTAAAACTGTATaGCGGGTATCTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVFKTV*RVSVRA
Trigger: GGCTCTGACAGATACCCGTCATACAGTTTTAAACAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGTGTTTAAAACTGTATaGCGGGTATCTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFVFKTV*RVSVRA
Trigger: GGCTCTGACAGATACCCGTCATACAGTTTTAAACAC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATGCTTCTGCCTGAACTaGCGCAATTGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREECFCLN*RNCLTD
Trigger: GTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATGCTTCTGCCTGAACTaGCGCAATTGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEICFCLN*RNCLTD
Trigger: GTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGTATTTGCTTCTGCCTaGACTGACGCAATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVVFASA*TDAIAS
Trigger: TGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATAC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGATTTCTGCAGATTGTaGTGCCTCAGTCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSADFCRL*CLSPNC
Trigger: ACAGTTTGGACTGAGGCATCACAATCTGCAGAAATC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGATTTCTGCAGATTGTaGTGCCTCAGTCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFDFCRL*CLSPNC
Trigger: ACAGTTTGGACTGAGGCATCACAATCTGCAGAAATC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGTAGAAATAGTTGCTTaGCCATTCCGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASVEIVA*PFRRFF
Trigger: GAAGAACCTGCGGAATGGTCAAGCAACTATTTCTAC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTAGAAATAGTTGCTTaGCCATTCCGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVEIVA*PFRRFF
Trigger: GAAGAACCTGCGGAATGGTCAAGCAACTATTTCTAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACCGACACAGGTCTCATaGGGGGCCTATTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTPTQVS*GAYFLL
Trigger: AAGAAGAAAATAGGCCCCTCATGAGACCTGTGTCGG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGAGCTACTTGCCATTTaGCATAGTAGCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRELLAI*HSSFIN
Trigger: ATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGCATTAAGAAATGACTaGTGTCCTTTATACGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEALRND*CPLYGG
Trigger: TCCTCCGTATAAAGGACATCAGTCATTTCTTAATGC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGGTAAACCGGGAGTCTaGTCCATTTTGCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVGKPGV*SILPCN
Trigger: ATTGCAAGGCAAAATGGATCAGACTCCCGGTTTACC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATGGATTGGCCTCACATaGTTATCTGCCAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKWIGLT*LSARFL
Trigger: CAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATGGATTGGCCTCACATaGTTATCTGCCAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTWIGLT*LSARFL
Trigger: CAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCAGCATTGCATCGAGTaGCTTCTTCAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVQHCIE*LLQQSR
Trigger: TCTGCTCTGTTGAAGAAGGCACTCGATGCAATGCTG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAACGCTGAATCCACCTTaGATTATCATCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASTLNPP*IIILPS
Trigger: ACTGGGCAAGATGATAATGCAAGGTGGATTCAGCGT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTACGCTGAATCCACCTTaGATTATCATCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFTLNPP*IIILPS
Trigger: ACTGGGCAAGATGATAATGCAAGGTGGATTCAGCGT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAACGCTGAATCCACCTTaGATTATCATCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSATLNPP*IIILPS
Trigger: ACTGGGCAAGATGATAATGCAAGGTGGATTCAGCGT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFVAPFL*PIQTLN
Trigger: ATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTAC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVAPFL*PIQTLN
Trigger: ATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAGACCTCCACCACAGTaGTGGTGTGTTCCAATTCAG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKRPPPQ*WCVPIQ
Trigger: CTGAATTGGAACACACCAGCACTGTGGTGGAGGTCT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTGGGTACCACAAATTaGATTGGCCTCACATGCTTA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVGTTN*IGLTCL
Trigger: TAAGCATGTGAGGCCAATCCAATTTGTGGTACCCAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAGGTCCCACTCTTTCTaGAGCATGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSARSHSF*SMSTIF
Trigger: GAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAGGTCCCACTCTTTCTaGAGCATGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASRSHSF*SMSTIF
Trigger: GAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCCTCCACCACAGTGCTaGTGTGTTCCAATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVPPPQC*CVPIQF
Trigger: AAACTGAATTGGAACACACCAGCACTGTGGTGGAGG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAATACGAGCTGCTTCTTaGGTAGTATTTAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEIRAAS*VVFKNG
Trigger: GCCGTTTTTAAATACTACCCAAGAAGCAGCTCGTAT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGCATAAAATCCTCCTaGCTAAACCAAAATCCAATG +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPESIKSS*LNQNPM
Trigger: CATTGGATTTTGGTTTAGTCAGGAGGATTTTATGCT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAAGGACTGTAACATCTaGGCCATTTCTTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAKDCNI*AISFTV
Trigger: CACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATCATTCTTCAACAGATaGTACCTTTCAGCACGAATT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRSFFNR*YLSARI
Trigger: AATTCGTGCTGAAAGGTATCATCTGTTGAAGAATGA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCCACTTATTTGCCGATaGCATTCTAGTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFPLICR*HSSLEL
Trigger: CAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGTCACAAGCTGTTaGAAATCCTGCTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSASVTSC*KSCSNF
Trigger: GAAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATGTATAGTCTTCATTTaGACCTTAAGCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPECIVFI*TLSSGD
Trigger: ATCTCCTGAGCTTAAGGTTCAAATGAAGACTATACA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAATGGTGTCCCAGATGTaGCCAAATTTTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKMVSQM*PNFQVW
Trigger: CCACACCTGAAAATTTGGTCACATCTGGGACACCAT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKTLSGA*AQFSRL
Trigger: CAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGATCTGGGCTTATTCTaGCAATATTTTGCATACATC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRDLGLF*QYFAYI
Trigger: GATGTATGCAAAATATTGTCAGAATAAGCCCAGATC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGAAAAATGCGCATTCTaGATACTTCCTCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPREKCAF*ILPPNC
Trigger: ACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATTCGTTGCACTGGTTTaGGTAAATAGGAATCCAGTC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAFVALV*VNRNPV
Trigger: GACTGGATTCCTATTTACTCAAACCAGTGCAACGAA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTCGTTGCACTGGTTTaGGTAAATAGGAATCCAGTC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASFVALV*VNRNPV
Trigger: GACTGGATTCCTATTTACTCAAACCAGTGCAACGAA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGTGTTTAAAACTGTATaGCGGGTATCTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVVFKTV*RVSVRA
Trigger: GGCTCTGACAGATACCCGTCATACAGTTTTAAACAC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGTATTTGCTTCTGCCTaGACTGACGCAATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKVFASA*TDAIAS
Trigger: TGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATAC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGTAGAAATAGTTGCTTaGCCATTCCGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVVEIVA*PFRRFF
Trigger: GAAGAACCTGCGGAATGGTCAAGCAACTATTTCTAC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAACATCTGCATCATTTaGGCTCAATGTCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASNICII*AQCLLR
Trigger: GCGCAAAAGACATTGAGCTCAAATGATGCAGATGTT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAAAACCAAAACCAAGTaGAAGTTCCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAKTKTK*KFPGKE
Trigger: TTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTGCATAATGGTGATTTaGTGCAAGCTTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFCIMVI*CKLVSM
Trigger: CATGGACACAAGCTTGCAGCAAATCACCATTATGCA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATGCATAATGGTGATTTaGTGCAAGCTTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSACIMVI*CKLVSM
Trigger: CATGGACACAAGCTTGCAGCAAATCACCATTATGCA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGGTAACGTAGCTCATTaGACCTCTGGCAGATTAAAT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAGNVAH*TSGRLN
Trigger: ATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGGTAACGTAGCTCATTaGACCTCTGGCAGATTAAAT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASGNVAH*TSGRLN
Trigger: ATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTGCTGTAGGAGTTTATaGATTTTGAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFCCRSL*ILKVLL
Trigger: CAGCAGGACCTTCAAAATGCATAAACTCCTACAGCA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATGGATTGGCCTCACATaGTTATCTGCCAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEWIGLT*LSARFL
Trigger: CAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFKHPSY*HCPNWR
Trigger: CCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAKHPSY*HCPNWR
Trigger: CCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASKHPSY*HCPNWR
Trigger: CCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRHNFPG*SRKCRY
Trigger: ATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACAGCATTGCATCGAGTaGCTTCTTCAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTQHCIE*LLQQSR
Trigger: TCTGCTCTGTTGAAGAAGGCACTCGATGCAATGCTG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACAGCATTGCATCGAGTaGCTTCTTCAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKQHCIE*LLQQSR
Trigger: TCTGCTCTGTTGAAGAAGGCACTCGATGCAATGCTG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAAGAAAAGGTGTCGCTaGATTGGTTTGAATCTAGCC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFKKRCR*IGLNLA
Trigger: GGCTAGATTCAAACCAATGCAGCGACACCTTTTCTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAAGAAAAGGTGTCGCTaGATTGGTTTGAATCTAGCC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASKKRCR*IGLNLA
Trigger: GGCTAGATTCAAACCAATGCAGCGACACCTTTTCTT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAGACCTCCACCACAGTaGTGGTGTGTTCCAATTCAG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREERPPPQ*WCVPIQ
Trigger: CTGAATTGGAACACACCAGCACTGTGGTGGAGGTCT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATGATCCATTCACTGTaGCAGTACTGCAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEMIHSL*QYCKVP
Trigger: CGGCACCTTGCAGTACTGCCACAGTGAATGGATCAT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATGTAATATCACAAACTaGGCCTTTGATAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRCNITN*AFDNSS
Trigger: GGAGCTATTATCAAAGGCCCAGTTTGTGATATTACA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAGCTCATTGCACCTCTaGCAGATTAAATCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSASSLHL*QIKSSA
Trigger: TGCACTTGATTTAATCTGCCAGAGGTGCAATGAGCT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATACCACAAATTGGATTaGCCTCACATGCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASYHKLD*PHMLIC
Trigger: GCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGTGGGTACCACAAATTaGATTGGCCTCACATGCTTA +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVVGTTN*IGLTCL
Trigger: TAAGCATGTGAGGCCAATCCAATTTGTGGTACCCAC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGTCCAAACTGGAGGATaGACCAGAACTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKVQTGG*TRTSLL
Trigger: GAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGAC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGTCCAAACTGGAGGATaGACCAGAACTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTVQTGG*TRTSLL
Trigger: GAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGAC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATGCCATTGTCCAAACTaGAGGATGGACCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTCHCPN*RMDQNF
Trigger: GAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATGCCATTGTCCAAACTaGAGGATGGACCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKCHCPN*RMDQNF
Trigger: GAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAAGGTGTCGCTGCATTaGTTTGAATCTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFKVSLH*FESSQI
Trigger: GATTTGGCTAGATTCAAACCAATGCAGCGACACCTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACAAACAAAGCTGCCGTaGCTGCTTCCATTAGCACAG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEQTKLP*LLPLAQ
Trigger: CTGTGCTAATGGAAGCAGCCACGGCAGCTTTGTTTG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACACAAGTTAAAACAATaGGCACAAAAGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRHKLKQ*AQKLWF
Trigger: AAACCACAGCTTTTGTGCCCATTGTTTTAACTTGTG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACCCGAAAAGAATTTCTaGGCTTTGTATTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEPEKNF*ALYCFT
Trigger: TGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGG...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACCCGAAAAGAATTTCTaGGCTTTGTATTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRPEKNF*ALYCFT
Trigger: TGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAAAATCCAATGTCTGTaGACGTTCGTTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASKIQCL*TFVEES
Trigger: GCTTTCTTCAACGAACGTTCACAGACATTGGATTTT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACAGCAAATCACTAACTaGGCTCAGCATAACAACTGG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKQQITN*AQHNNW
Trigger: CCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCAGCAAATCACTAACTaGGCTCAGCATAACAACTGG +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLQQITN*AQHNNW
Trigger: CCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGAAGGACTGTAACATCTaGGCCATTTCTTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVKDCNI*AISFTV
Trigger: CACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKILVLN*QLLQCQ
Trigger: CTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAAT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLILVLN*QLLQCQ
Trigger: CTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAAT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTILVLN*QLLQCQ
Trigger: CTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAAT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAATGGTGTCCCAGATGTaGCCAAATTTTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIMVSQM*PNFQVW
Trigger: CCACACCTGAAAATTTGGTCACATCTGGGACACCAT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGAACTTCTCTTCTCCTaGCAATCAGGCACCACTTCA +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEELLFS*QSGTTS
Trigger: TGAAGTGGTGCCTGATTGTCAGGAGAAGAGAAGTTC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREETLSGA*AQFSRL
Trigger: CAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEITLSGA*AQFSRL
Trigger: CAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGCCCTATCCAAACGCTaGATCCACCTTGCATTATCA +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIALSKR*IHLALS
Trigger: TGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGTGTTTAAAACTGTATaGCGGGTATCTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTVFKTV*RVSVRA
Trigger: GGCTCTGACAGATACCCGTCATACAGTTTTAAACAC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGATTTCTGCAGATTGTaGTGCCTCAGTCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKDFCRL*CLSPNC
Trigger: ACAGTTTGGACTGAGGCATCACAATCTGCAGAAATC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGATTTCTGCAGATTGTaGTGCCTCAGTCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTDFCRL*CLSPNC
Trigger: ACAGTTTGGACTGAGGCATCACAATCTGCAGAAATC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGGATTTCTGCAGATTGTaGTGCCTCAGTCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLDFCRL*CLSPNC
Trigger: ACAGTTTGGACTGAGGCATCACAATCTGCAGAAATC...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGGTAGAAATAGTTGCTTaGCCATTCCGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLVEIVA*PFRRFF
Trigger: GAAGAACCTGCGGAATGGTCAAGCAACTATTTCTAC...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGTAGAAATAGTTGCTTaGCCATTCCGCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTVEIVA*PFRRFF
Trigger: GAAGAACCTGCGGAATGGTCAAGCAACTATTTCTAC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGAGCTACTTGCCATTTaGCATAGTAGCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFELLAI*HSSFIN
Trigger: ATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGAGCTACTTGCCATTTaGCATAGTAGCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASELLAI*HSSFIN
Trigger: ATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGCATTAAGAAATGACTaGTGTCCTTTATACGGAGGA +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASALRND*CPLYGG
Trigger: TCCTCCGTATAAAGGACATCAGTCATTTCTTAATGC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGGTAAACCGGGAGTCTaGTCCATTTTGCCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIGKPGV*SILPCN
Trigger: ATTGCAAGGCAAAATGGATCAGACTCCCGGTTTACC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATCAAACTTCCATAGTTaGAGATACTGCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRSNFHS*RYCSIF
Trigger: AAAAATGGAGCAGTATCTGCAACTATGGAAGTTTGA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATCAAACTTCCATAGTTaGAGATACTGCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LSGHIQTVALNKIYSCPESNFHS*RYCSIF
Trigger: AAAAATGGAGCAGTATCTGCAACTATGGAAGTTTGA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTGCATAATGGTGATTTaGTGCAAGCTTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVCIMVI*CKLVSM
Trigger: CATGGACACAAGCTTGCAGCAAATCACCATTATGCA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGGTAACGTAGCTCATTaGACCTCTGGCAGATTAAAT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVGNVAH*TSGRLN
Trigger: ATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATTCCTGAAACCAGCCTaGTGGTTCTCAAATATACTT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAFLKPA*WFSNIL
Trigger: AAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTCCTGAAACCAGCCTaGTGGTTCTCAAATATACTT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASFLKPA*WFSNIL
Trigger: AAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGACGCTGAATCCACCTTaGATTATCATCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLTLNPP*IIILPS
Trigger: ACTGGGCAAGATGATAATGCAAGGTGGATTCAGCGT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKVAPFL*PIQTLN
Trigger: ATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTAC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACCAGATTTCAAACTTaGGGTTATCACCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRTRFQT*GYHLLH
Trigger: ATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGTGGGTACCACAAATTaGATTGGCCTCACATGCTTA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKVGTTN*IGLTCL
Trigger: TAAGCATGTGAGGCCAATCCAATTTGTGGTACCCAC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGTGGGTACCACAAATTaGATTGGCCTCACATGCTTA +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTVGTTN*IGLTCL
Trigger: TAAGCATGTGAGGCCAATCCAATTTGTGGTACCCAC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGGTGGGTACCACAAATTaGATTGGCCTCACATGCTTA +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLVGTTN*IGLTCL
Trigger: TAAGCATGTGAGGCCAATCCAATTTGTGGTACCCAC...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCCAAATTTTCAGGTGTaGGTACCACAAATTGGATTG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFPNFQV*VPQIGL
Trigger: CAATCCAATTTGTGGTACCCACACCTGAAAATTTGG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACCAAATTTTCAGGTGTaGGTACCACAAATTGGATTG +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASPNFQV*VPQIGL
Trigger: CAATCCAATTTGTGGTACCCACACCTGAAAATTTGG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGTCCAAACTGGAGGATaGACCAGAACTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEVQTGG*TRTSLL
Trigger: GAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGAC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATGCCATTGTCCAAACTaGAGGATGGACCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREECHCPN*RMDQNF
Trigger: GAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAAGATCAAACATCTCTaGATTATCCATCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFKIKHL*IIHLRS
Trigger: AGAGCGGAGATGGATAATCCAGAGATGTTTGATCTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAAGATCAAACATCTCTaGATTATCCATCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASKIKHL*IIHLRS
Trigger: AGAGCGGAGATGGATAATCCAGAGATGTTTGATCTT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAGGTCCCACTCTTTCTaGAGCATGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTRSHSF*SMSTIF
Trigger: GAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCTCCACCACAGTGCTaGTGTGTTCCAATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPPPQC*CVPIQF
Trigger: AAACTGAATTGGAACACACCAGCACTGTGGTGGAGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
CDS-3UTR CCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGATTAGCTTGTGCTaGACTGCTCAAGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLWISLC*TAQEDQ
Trigger: CTGATCTTCTTGAGCAGTCCAGCACAAGCTAATCCA...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTATACGAGCTGCTTCTTaGGTAGTATTTAAAAACGGC +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFIRAAS*VVFKNG
Trigger: GCCGTTTTTAAATACTACCCAAGAAGCAGCTCGTAT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATACAGCAAATCACTAACTaGGCTCAGCATAACAACTGG +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIQQITN*AQHNNW
Trigger: CCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTG...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAAGGACTGTAACATCTaGGCCATTTCTTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTKDCNI*AISFTV
Trigger: CACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTCATTCTTCAACAGATaGTACCTTTCAGCACGAATT +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFSFFNR*YLSARI
Trigger: AATTCGTGCTGAAAGGTATCATCTGTTGAAGAATGA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEILVLN*QLLQCQ
Trigger: CTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAAT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACCACTTATTTGCCGATaGCATTCTAGTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTPLICR*HSSLEL
Trigger: CAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACCACTTATTTGCCGATaGCATTCTAGTCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKPLICR*HSSLEL
Trigger: CAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATCAGTCACAAGCTGTTaGAAATCCTGCTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTSVTSC*KSCSNF
Trigger: GAAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATCAGTCACAAGCTGTTaGAAATCCTGCTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKSVTSC*KSCSNF
Trigger: GAAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATGTATAGTCTTCATTTaGACCTTAAGCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASCIVFI*TLSSGD
Trigger: ATCTCCTGAGCTTAAGGTTCAAATGAAGACTATACA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATGTATAGTCTTCATTTaGACCTTAAGCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSACIVFI*TLSSGD
Trigger: ATCTCCTGAGCTTAAGGTTCAAATGAAGACTATACA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGATCTGGGCTTATTCTaGCAATATTTTGCATACATC +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASDLGLF*QYFAYI
Trigger: GATGTATGCAAAATATTGTCAGAATAAGCCCAGATC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGAAAAATGCGCATTCTaGATACTTCCTCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAEKCAF*ILPPNC
Trigger: ACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGAAAAATGCGCATTCTaGATACTTCCTCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASEKCAF*ILPPNC
Trigger: ACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATTCGTTGCACTGGTTTaGGTAAATAGGAATCCAGTC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTFVALV*VNRNPV
Trigger: GACTGGATTCCTATTTACTCAAACCAGTGCAACGAA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGTGTTTAAAACTGTATaGCGGGTATCTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIVFKTV*RVSVRA
Trigger: GGCTCTGACAGATACCCGTCATACAGTTTTAAACAC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCCCGTTCTGTTAATTaGTCCTGTTGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSASRSVN*SCCFLF
Trigger: AAAAAGAAAGCAACAGGATCAATTAACAGAACGGGA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGAGCTACTTGCCATTTaGCATAGTAGCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVELLAI*HSSFIN
Trigger: ATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAACATCTGCATCATTTaGGCTCAATGTCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTNICII*AQCLLR
Trigger: GCGCAAAAGACATTGAGCTCAAATGATGCAGATGTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGCGTGTCCATTAACCTaGAAACAACATCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKACPLT*KQHLHH
Trigger: ATGATGCAGATGTTGTTTTCAGGTTAATGGACACGC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGCGTGTCCATTAACCTaGAAACAACATCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTACPLT*KQHLHH
Trigger: ATGATGCAGATGTTGTTTTCAGGTTAATGGACACGC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGGCGTGTCCATTAACCTaGAAACAACATCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLACPLT*KQHLHH
Trigger: ATGATGCAGATGTTGTTTTCAGGTTAATGGACACGC...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCTTGCATTAAGAAATaGCTGATGTCCTTTATACGG +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSASCIKK*LMSFIR
Trigger: CCGTATAAAGGACATCAGTCATTTCTTAATGCAAGA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTCTTGCATTAAGAAATaGCTGATGTCCTTTATACGG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFSCIKK*LMSFIR
Trigger: CCGTATAAAGGACATCAGTCATTTCTTAATGCAAGA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATCTTGCATTAAGAAATaGCTGATGTCCTTTATACGG +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASSCIKK*LMSFIR
Trigger: CCGTATAAAGGACATCAGTCATTTCTTAATGCAAGA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAAAACCAAAACCAAGTaGAAGTTCCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTKTKTK*KFPGKE
Trigger: TTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAAACCAAAACCAAGTaGAAGTTCCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKTKTK*KFPGKE
Trigger: TTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAACTCAGGGGTTAATTaGTTGTCATCAATGTATGTC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSANSGVN*LSSMYV
Trigger: GACATACATTGATGACAAGCAATTAACCCCTGAGTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCTGTAGGAGTTTATaGATTTTGAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLCCRSL*ILKVLL
Trigger: CAGCAGGACCTTCAAAATGCATAAACTCCTACAGCA...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATGCTGTAGGAGTTTATaGATTTTGAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKCCRSL*ILKVLL
Trigger: CAGCAGGACCTTCAAAATGCATAAACTCCTACAGCA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTTCCTGAAACCAGCCTaGTGGTTCTCAAATATACTT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVFLKPA*WFSNIL
Trigger: AAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKHPSY*HCPNWR
Trigger: CCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLKHPSY*HCPNWR
Trigger: CCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTKHPSY*HCPNWR
Trigger: CCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASHNFPG*SRKCRY
Trigger: ATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAHNFPG*SRKCRY
Trigger: ATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIVAPFL*PIQTLN
Trigger: ATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTAC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEVAPFL*PIQTLN
Trigger: ATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTAC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAAGAAAAGGTGTCGCTaGATTGGTTTGAATCTAGCC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTKKRCR*IGLNLA
Trigger: GGCTAGATTCAAACCAATGCAGCGACACCTTTTCTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGAAGAAAAGGTGTCGCTaGATTGGTTTGAATCTAGCC +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLKKRCR*IGLNLA
Trigger: GGCTAGATTCAAACCAATGCAGCGACACCTTTTCTT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATGTAATATCACAAACTaGGCCTTTGATAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSACNITN*AFDNSS
Trigger: GGAGCTATTATCAAAGGCCCAGTTTGTGATATTACA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAGCTCATTGCACCTCTaGCAGATTAAATCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKSSLHL*QIKSSA
Trigger: TGCACTTGATTTAATCTGCCAGAGGTGCAATGAGCT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATACCACAAATTGGATTaGCCTCACATGCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTYHKLD*PHMLIC
Trigger: GCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAGGTCCCACTCTTTCTaGAGCATGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREERSHSF*SMSTIF
Trigger: GAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGAAGGTGTCGCTGCATTaGTTTGAATCTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLKVSLH*FESSQI
Trigger: GATTTGGCTAGATTCAAACCAATGCAGCGACACCTT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAGGTGTCGCTGCATTaGTTTGAATCTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKVSLH*FESSQI
Trigger: GATTTGGCTAGATTCAAACCAATGCAGCGACACCTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATGGGCACAAAAGCTGTaGTTTCAACAAAAGCATATT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASWAQKL*FQQKHI
Trigger: AATATGCTTTTGTTGAAACCACAGCTTTTGTGCCCA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATGGGCACAAAAGCTGTaGTTTCAACAAAAGCATATT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAWAQKL*FQQKHI
Trigger: AATATGCTTTTGTTGAAACCACAGCTTTTGTGCCCA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATCAGTCACAAGCTGTTaGAAATCCTGCTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEISVTSC*KSCSNF
Trigger: GAAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGATCTGGGCTTATTCTaGCAATATTTTGCATACATC +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVDLGLF*QYFAYI
Trigger: GATGTATGCAAAATATTGTCAGAATAAGCCCAGATC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATTCGTTGCACTGGTTTaGGTAAATAGGAATCCAGTC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEFVALV*VNRNPV
Trigger: GACTGGATTCCTATTTACTCAAACCAGTGCAACGAA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTCCCGTTCTGTTAATTaGTCCTGTTGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVSRSVN*SCCFLF
Trigger: AAAAAGAAAGCAACAGGATCAATTAACAGAACGGGA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGCATTAAGAAATGACTaGTGTCCTTTATACGGAGGA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKALRND*CPLYGG
Trigger: TCCTCCGTATAAAGGACATCAGTCATTTCTTAATGC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATTTGGAGAGAGATTTTaGGAGAAGACCATGTATCCA +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKFGERF*EKTMYP
Trigger: TGGATACATGGTCTTCTCTCAAAATCTCTCTCCAAA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAAAACCAAAACCAAGTaGAAGTTCCCAGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEKTKTK*KFPGKE
Trigger: TTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGAACTCAGGGGTTAATTaGTTGTCATCAATGTATGTC +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVNSGVN*LSSMYV
Trigger: GACATACATTGATGACAAGCAATTAACCCCTGAGTT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATCAAACTTCCATAGTTaGAGATACTGCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASSNFHS*RYCSIF
Trigger: AAAAATGGAGCAGTATCTGCAACTATGGAAGTTTGA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGGTAACGTAGCTCATTaGACCTCTGGCAGATTAAAT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIGNVAH*TSGRLN
Trigger: ATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATTCCTGAAACCAGCCTaGTGGTTCTCAAATATACTT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTFLKPA*WFSNIL
Trigger: AAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATTCCTGAAACCAGCCTaGTGGTTCTCAAATATACTT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKFLKPA*WFSNIL
Trigger: AAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAAGAAAAGGTGTCGCTaGATTGGTTTGAATCTAGCC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIKKRCR*IGLNLA
Trigger: GGCTAGATTCAAACCAATGCAGCGACACCTTTTCTT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAACCAGATTTCAAACTTaGGGTTATCACCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: YVLWFLCVSINLKTTSASTRFQT*GYHLLH
Trigger: ATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAACCAGATTTCAAACTTaGGGTTATCACCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: KYVLWFLCVSINLKTTSATRFQT*GYHLLH
Trigger: ATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATTGTGGATTAGCTTGTaGTGGACTGCTCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEILWISL*WTAQED
Trigger: ATCTTCTTGAGCAGTCCAGCACAAGCTAATCCACAA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCAAGGCACACCGATTaGATTTGGTTACAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPRHTD*IWLQSR
Trigger: TCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAACAAAATTTACTCATaGCCCGAAAAGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLWFLCVSINLKTTSASFNKIYS*PEKNFW
Trigger: CCAGAAATTCTTTTCGGGGCATGAGTAAATTTTGTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAGCTCATTGCACCTCTaGCAGATTAAATCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEISSLHL*QIKSSA
Trigger: TGCACTTGATTTAATCTGCCAGAGGTGCAATGAGCT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATACCACAAATTGGATTaGCCTCACATGCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEYHKLD*PHMLIC
Trigger: GCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAGATCAAACATCTCTaGATTATCCATCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKIKHL*IIHLRS
Trigger: AGAGCGGAGATGGATAATCCAGAGATGTTTGATCTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAAGATCAAACATCTCTaGATTATCCATCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTKIKHL*IIHLRS
Trigger: AGAGCGGAGATGGATAATCCAGAGATGTTTGATCTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAAGGTGTCGCTGCATTaGTTTGAATCTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIKVSLH*FESSQI
Trigger: GATTTGGCTAGATTCAAACCAATGCAGCGACACCTT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAGAAGTATGTGCTGTaGTTTCTTTGCGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKKYVL*FLCVSI
Trigger: AATGGACACGCAAAGAAACCACAGCACATACTTCTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCACAAGTTAAAACAATaGGCACAAAAGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVHKLKQ*AQKLWF
Trigger: AAACCACAGCTTTTGTGCCCATTGTTTTAACTTGTG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAAAATCCAATGTCTGTaGACGTTCGTTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEKIQCL*TFVEES
Trigger: GCTTTCTTCAACGAACGTTCACAGACATTGGATTTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATCATTCTTCAACAGATaGTACCTTTCAGCACGAATT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTSFFNR*YLSARI
Trigger: AATTCGTGCTGAAAGGTATCATCTGTTGAAGAATGA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATGTATAGTCTTCATTTaGACCTTAAGCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTCIVFI*TLSSGD
Trigger: ATCTCCTGAGCTTAAGGTTCAAATGAAGACTATACA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTATAGTCTTCATTTaGACCTTAAGCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLCIVFI*TLSSGD
Trigger: ATCTCCTGAGCTTAAGGTTCAAATGAAGACTATACA...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGATCTGGGCTTATTCTaGCAATATTTTGCATACATC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTDLGLF*QYFAYI
Trigger: GATGTATGCAAAATATTGTCAGAATAAGCCCAGATC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGATCTGGGCTTATTCTaGCAATATTTTGCATACATC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKDLGLF*QYFAYI
Trigger: GATGTATGCAAAATATTGTCAGAATAAGCCCAGATC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGAAAAATGCGCATTCTaGATACTTCCTCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTEKCAF*ILPPNC
Trigger: ACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATCCCGTTCTGTTAATTaGTCCTGTTGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTSRSVN*SCCFLF
Trigger: AAAAAGAAAGCAACAGGATCAATTAACAGAACGGGA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGAGCTACTTGCCATTTaGCATAGTAGCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIELLAI*HSSFIN
Trigger: ATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGAGCTACTTGCCATTTaGCATAGTAGCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEELLAI*HSSFIN
Trigger: ATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATTTGGAGAGAGATTTTaGGAGAAGACCATGTATCCA +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIFGERF*EKTMYP
Trigger: TGGATACATGGTCTTCTCTCAAAATCTCTCTCCAAA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAACTCAGGGGTTAATTaGTTGTCATCAATGTATGTC +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKNSGVN*LSSMYV
Trigger: GACATACATTGATGACAAGCAATTAACCCCTGAGTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATTCCTGAAACCAGCCTaGTGGTTCTCAAATATACTT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEFLKPA*WFSNIL
Trigger: AAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKHNFPG*SRKCRY
Trigger: ATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLHNFPG*SRKCRY
Trigger: ATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGAGCTCAATGTCTTTTaGGCAGTATTTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTELNVF*AVFFQM
Trigger: CATTTGGAAAAATACTGCGCAAAAGACATTGAGCTC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGAACAAAATTTACTCATaGCCCGAAAAGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVNKIYS*PEKNFW
Trigger: CCAGAAATTCTTTTCGGGGCATGAGTAAATTTTGTT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATGTAATATCACAAACTaGGCCTTTGATAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTCNITN*AFDNSS
Trigger: GGAGCTATTATCAAAGGCCCAGTTTGTGATATTACA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATACCAAATTTTCAGGTGTaGGTACCACAAATTGGATTG +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIPNFQV*VPQIGL
Trigger: CAATCCAATTTGTGGTACCCACACCTGAAAATTTGG...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCAAATTTTCAGGTGTaGGTACCACAAATTGGATTG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPNFQV*VPQIGL
Trigger: CAATCCAATTTGTGGTACCCACACCTGAAAATTTGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAAGATCAAACATCTCTaGATTATCCATCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIKIKHL*IIHLRS
Trigger: AGAGCGGAGATGGATAATCCAGAGATGTTTGATCTT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAAGATCAAACATCTCTaGATTATCCATCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEKIKHL*IIHLRS
Trigger: AGAGCGGAGATGGATAATCCAGAGATGTTTGATCTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAATTTCTCAGGAGAGGTaGCATAAGATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIISQER*HKIKHL
Trigger: GAGATGTTTGATCTTATGCCACCTCTCCTGAGAAAT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATGGGCACAAAAGCTGTaGTTTCAACAAAAGCATATT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKWAQKL*FQQKHI
Trigger: AATATGCTTTTGTTGAAACCACAGCTTTTGTGCCCA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCACAAGTTAAAACAATaGGCACAAAAGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLHKLKQ*AQKLWF
Trigger: AAACCACAGCTTTTGTGCCCATTGTTTTAACTTGTG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGATCTGGGCTTATTCTaGCAATATTTTGCATACATC +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEDLGLF*QYFAYI
Trigger: GATGTATGCAAAATATTGTCAGAATAAGCCCAGATC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAGAAAAATGCGCATTCTaGATACTTCCTCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEEKCAF*ILPPNC
Trigger: ACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTC...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGAAAAATGCGCATTCTaGATACTTCCTCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIEKCAF*ILPPNC
Trigger: ACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATCCCGTTCTGTTAATTaGTCCTGTTGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREESRSVN*SCCFLF
Trigger: AAAAAGAAAGCAACAGGATCAATTAACAGAACGGGA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR TCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATCCCGTTCTGTTAATTaGTCCTGTTGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEISRSVN*SCCFLF
Trigger: AAAAAGAAAGCAACAGGATCAATTAACAGAACGGGA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAACTCAGGGGTTAATTaGTTGTCATCAATGTATGTC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEINSGVN*LSSMYV
Trigger: GACATACATTGATGACAAGCAATTAACCCCTGAGTT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATCAAACTTCCATAGTTaGAGATACTGCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKSNFHS*RYCSIF
Trigger: AAAAATGGAGCAGTATCTGCAACTATGGAAGTTTGA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEHNFPG*SRKCRY
Trigger: ATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACCAGATTTCAAACTTaGGGTTATCACCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTTRFQT*GYHLLH
Trigger: ATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGACCAGATTTCAAACTTaGGGTTATCACCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLTRFQT*GYHLLH
Trigger: ATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAACAAAATTTACTCATaGCCCGAAAAGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKNKIYS*PEKNFW
Trigger: CCAGAAATTCTTTTCGGGGCATGAGTAAATTTTGTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGCCAGTTCTGCTTGTTaGTTTAATAGAAATTCAACT +
Preference number: 4 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTASSAC*FNRNST
Trigger: AGTTGAATTTCTATTAAACCAACAAGCAGAACTGGC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATGTAATATCACAAACTaGGCCTTTGATAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEICNITN*AFDNSS
Trigger: GGAGCTATTATCAAAGGCCCAGTTTGTGATATTACA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATGGGCACAAAAGCTGTaGTTTCAACAAAAGCATATT +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEWAQKL*FQQKHI
Trigger: AATATGCTTTTGTTGAAACCACAGCTTTTGTGCCCA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATACACAAGTTAAAACAATaGGCACAAAAGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIHKLKQ*AQKLWF
Trigger: AAACCACAGCTTTTGTGCCCATTGTTTTAACTTGTG...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATACCCGAAAAGAATTTCTaGGCTTTGTATTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIPEKNF*ALYCFT
Trigger: TGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGG...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCCGAAAAGAATTTCTaGGCTTTGTATTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPEKNF*ALYCFT
Trigger: TGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR GCA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAACAAAATTTACTCATaGCCCGAAAAGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: KLNNPRHTDCIWLQSREENKIYS*PEKNFW
Trigger: CCAGAAATTCTTTTCGGGGCATGAGTAAATTTTGTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CCA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGCCAGTTCTGCTTGTTaGTTTAATAGAAATTCAACT +
Preference number: 4 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIASSAC*FNRNST
Trigger: AGTTGAATTTCTATTAAACCAACAAGCAGAACTGGC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS CCA 90 bp ACGCGCTGCAGGGCCATGGCCATGTCCACCTGCAGAGGGATCGCCTaGGCTATCGGCATGAAAGTGCAGCCATCTGGGTTCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: TRCRAMAMSTCRGIA*AIGMKVQPSGFWGR
Trigger: CCTGCCCCAGAACCCAGATGGCTGCACTTTCATGCCGATAGCCCAGGCGATCCCTCTGCAGGTGGACATGGCCATGGCCCTGCAGCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS GCA 90 bp TTCTCGGCAATCCTCACGCGCTGCAGGGCCATGGCCATGTCCACCTaGAGAGGGATCGCCTGGGCTATCGGCATGAAAGTGCAGCCATCT +
Preference number: 5 (lower is better)
Translates to: FSAILTRCRAMAMST*RGIAWAIGMKVQPS
Trigger: AGATGGCTGCACTTTCATGCCGATAGCCCAGGCGATCCCTCTGCAGGTGGACATGGCCATGGCCCTGCAGCGCGTGAGGATTGCCGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCGCCGAAGCGGCAGCTaGGGGCATGTGCCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVRRSGS*GHVPGR
Trigger: GCGGCCAGGCACATGCCCCAAGCTGCCGCTTCGGCG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS TCA 90 bp CCCGGCCACCAGACAAGAAGGCGATGTCTTGCATTAAGAAATGACTaGTGTCCTTTATACGGAGGAGCAGATCGGTTTCTGCCACGAAGA +
Preference number: 5 (lower is better)
Translates to: PGHQTRRRCLALRND*CPLYGGADRFLPRR
Trigger: TCTTCGTGGCAGAAACCGATCTGCTCCTCCGTATAAAGGACATCAGTCATTTCTTAATGCAAGACATCGCCTTCTTGTCTGGTGGCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS TCA 90 bp TTTCCCCGGCCACCAGACAAGAAGGCGATGTCTTGCATTAAGAAATaGCTGATGTCCTTTATACGGAGGAGCAGATCGGTTTCTGCCACG +
Preference number: 5 (lower is better)
Translates to: FPRPPDKKAMSCIKK*LMSFIRRSRSVSAT
Trigger: CGTGGCAGAAACCGATCTGCTCCTCCGTATAAAGGACATCAGTCATTTCTTAATGCAAGACATCGCCTTCTTGTCTGGTGGCCGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS CCA 90 bp CCCAGATGTGACCAAATTTTCAGGTGTGGGTACCACAAATTGGATTaGCCTCACATGCTTATCTGCCAGGTTCCTGAAACCAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PRCDQIFRCGYHKLD*PHMLICQVPETSLL
Trigger: CAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGTCACATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CCA 90 bp GGTGTCCCAGATGTGACCAAATTTTCAGGTGTGGGTACCACAAATTaGATTGGCCTCACATGCTTATCTGCCAGGTTCCTGAAACCAGCC +
Preference number: 5 (lower is better)
Translates to: GVPDVTKFSGVGTTN*IGLTCLSARFLKPA
Trigger: GGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGTCACATCTGGGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATGCCTCTCCGGGGATTaGCTTCTGCCATTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRCLSGD*LLPFRL
Trigger: CAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACCTGAACTGACGCAATaGCCTCACAGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEPELTQ*PHRPPP
Trigger: TGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGG...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS GCA 90 bp TTCAGGTGTGGGTACCACAAATTGGATTGGCCTCACATGCTTATCTaGCAGGTTCCTGAAACCAGCCTGCTGGTTCTCAAATATACTTCG +
Preference number: 5 (lower is better)
Translates to: FRCGYHKLDWPHMLI*QVPETSLLVLKYTS
Trigger: CGAAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 90 bp CCCGGCCACCAGACAAGAAGGCGATGTCTTGCATTAAGAAATGACTaGTGTCCTTTATACGGAGGAGCAGATCGGTTTCACAAATGTTTG +
Preference number: 5 (lower is better)
Translates to: PGHQTRRRCLALRND*CPLYGGADRFHKCL
Trigger: CAAACATTTGTGAAACCGATCTGCTCCTCCGTATAAAGGACATCAGTCATTTCTTAATGCAAGACATCGCCTTCTTGTCTGGTGGCCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000519895.5
CDS TCA 90 bp TTTCCCCGGCCACCAGACAAGAAGGCGATGTCTTGCATTAAGAAATaGCTGATGTCCTTTATACGGAGGAGCAGATCGGTTTCACAAATG +
Preference number: 5 (lower is better)
Translates to: FPRPPDKKAMSCIKK*LMSFIRRSRSVSQM
Trigger: CATTTGTGAAACCGATCTGCTCCTCCGTATAAAGGACATCAGTCATTTCTTAATGCAAGACATCGCCTTCTTGTCTGGTGGCCGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000519895.5
CDS GCA 90 bp ACCAAATTTTCAGGTGTGGGTACCACAAATTGGATTGGCCTCACATaGTTATCTGCCAGGTTCCTGAAACCAGCCTGCTGGTTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: TKFSGVGTTNWIGLT*LSARFLKPACWFSN
Trigger: ATTTGAGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCCTGAACTGACGCAATaGCCTCACAGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFPELTQ*PHRPPP
Trigger: TGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACCTGAACTGACGCAATaGCCTCACAGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAPELTQ*PHRPPP
Trigger: TGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACTTCTGAACCTCATCTaGCCTCTCCGGGGATTTGCT +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASLLNLI*PLRGFA
Trigger: AGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAACGCTGAATCCACCTaGCATTATCATCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRNAEST*HYHLAQ
Trigger: CTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEFVAPF*CPIQTL
Trigger: CAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATGCCTCTCCGGGGATTaGCTTCTGCCATTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKCLSGD*LLPFRL
Trigger: CAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS TCA 90 bp TTTGCCAGTCACCACTTATTTGCCGATGACATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAGGCACTTCCAGATTTGTTAGCAGAA +
Preference number: 5 (lower is better)
Translates to: FASHHLFADDILVLN*QLLQCQALPDLLAE
Trigger: TTCTGCTAACAAATCTGGAAGTGCCTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGGTGACTGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 90 bp TCATCCTTCCTTTCCAGGAAACAAGGTCCCACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTGCTCAAGAAAATGTCGTTATGGAAT +
Preference number: 5 (lower is better)
Translates to: SSFLSRKQGPTLSGA*AQFSRLLKKMSLWN
Trigger: ATTCCATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCTTGTTTCCTGGAAAGGAAGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGCTTCTGAACCTCATCTaGCCTCTCCGGGGATTTGCT +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVLLNLI*PLRGFA
Trigger: AGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAG...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGTCTGTGAACGTTCGTaGAAGAAAGCTGGTAGGACG +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASVCERS*KKAGRT
Trigger: CGTCCTACCAGCTTTCTTCAACGAACGTTCACAGAC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTCTGTGAACGTTCGTaGAAGAAAGCTGGTAGGACG +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVCERS*KKAGRT
Trigger: CGTCCTACCAGCTTTCTTCAACGAACGTTCACAGAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGTACCACAAATTGGATaGGCCTCACATGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEVPQIG*ASHAYL
Trigger: CAGATAAGCATGTGAGGCCAATCCAATTTGTGGTAC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACCTGAACTGACGCAATaGCCTCACAGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTPELTQ*PHRPPP
Trigger: TGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACCTGAACTGACGCAATaGCCTCACAGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKPELTQ*PHRPPP
Trigger: TGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGGTAGAAATAGTTGCTaGACCATTCCGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEGRNSC*TIPQVL
Trigger: AAGAACCTGCGGAATGGTCAAGCAACTATTTCTACC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATGCCACGAAGACTGCTaGCAGGAGGCAGAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTCHEDC*QEAEVV
Trigger: AACTACCTCTGCCTCCTGCAAGCAGTCTTCGTGGCA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS TCA 90 bp GGTAGTTCTGTCTCAGCCAGTTCAGTTCCAAAGGACTGTAACATCTaGGCCATTTCTTTCACTGTGAGGGCAAAATTTTCTATAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GSSVSASSVPKDCNI*AISFTVRAKFSIAG
Trigger: ACCAGCTATAGAAAATTTTGCCCTCACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTTTGGAACTGAACTGGCTGAGACAGAACTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536274.5
CDS GCA 90 bp TTTTCTATAGCATTTCTGAAGATGATCCATTCACTGTGGCAGTACTaGAAGGTGCCGCCTAACTCAGGGGTTAATTGCTTGTCATCAATG +
Preference number: 5 (lower is better)
Translates to: FSIAFLKMIHSLWQY*KVPPNSGVNCLSSM
Trigger: CATTGATGACAAGCAATTAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGAATGGATCATCTTCAGAAATGCTATAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS GCA 90 bp GGTTTGAATCTAGCCAAATCCTTCATTTTTGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAATCCACCTTGCATTATCATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GLNLAKSFIFVAPFL*PIQTLNPPCIIILP
Trigger: GGGCAAGATGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAAAATGAAGGATTTGGCTAGATTCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAATCAGGGGTTAATTGCTaGTCATCAATGTATGTCAGC +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPESGVNC*SSMYVS
Trigger: GCTGACATACATTGATGACAAGCAATTAACCCCTGA...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAGAAGGTCCTGCTGAGTaGTATCCGTTTTGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPREGPAE*YPFCFY
Trigger: ATAAAAGCAAAACGGATACAACTCAGCAGGACCTTC...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAGGAGTTTATGCATTTaGAAGGTCCTGCTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPERSLCI*KVLLSC
Trigger: ACAACTCAGCAGGACCTTCAAAATGCATAAACTCCT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTGTGGGTACCACAAATaGGATTGGCCTCACATGCTT +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFCGYHK*DWPHML
Trigger: AAGCATGTGAGGCCAATCCAATTTGTGGTACCCACA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATGTGGGTACCACAAATaGGATTGGCCTCACATGCTT +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASCGYHK*DWPHML
Trigger: AAGCATGTGAGGCCAATCCAATTTGTGGTACCCACA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEKTSKL*PLSKLE
Trigger: CTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTT...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRKTSKL*PLSKLE
Trigger: CTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAACGCTGAATCCACCTaGCATTATCATCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFNAEST*HYHLAQ
Trigger: CTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFFVAPF*CPIQTL
Trigger: CAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAFVAPF*CPIQTL
Trigger: CAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCTGAACTGACGCAATaGCCTCACAGACCTCCACCA +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPELTQ*PHRPPP
Trigger: TGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCAGTCCAAACTGTATTaGCTTCTGCCTGAACTGACG +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFQSKLY*LLPELT
Trigger: CGTCAGTTCAGGCAGAAGCAAATACAGTTTGGACTG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACAGTCCAAACTGTATTaGCTTCTGCCTGAACTGACG +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAQSKLY*LLPELT
Trigger: CGTCAGTTCAGGCAGAAGCAAATACAGTTTGGACTG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAACAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAGGAAGCCGAGATTTTTaGGAGAGAGATTTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: LSGHIQTVALNKIYSCPEGSRDF*ERDFER
Trigger: TCTCTCAAAATCTCTCTCCAAAAAATCTCGGCTTCC...TTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS CCA 90 bp ATTGGCCTCACATGCTTATCTGCCAGGTTCCTGAAACCAGCCTGCTaGTTCTCAAATATACTTCGAATGTTTTCAAGCTTGAGTTGTATA +
Preference number: 5 (lower is better)
Translates to: IGLTCLSARFLKPAC*FSNILRMFSSLSCI
Trigger: TATACAACTCAAGCTTGAAAACATTCGAAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGTCTGTGAACGTTCGTaGAAGAAAGCTGGTAGGACG +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTVCERS*KKAGRT
Trigger: CGTCCTACCAGCTTTCTTCAACGAACGTTCACAGAC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGTGCATAATGGTGATTaGCTGCAAGCTTGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAVHNGD*LQACVH
Trigger: ATGGACACAAGCTTGCAGCAAATCACCATTATGCAC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGTACCACAAATTGGATaGGCCTCACATGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFVPQIG*ASHAYL
Trigger: CAGATAAGCATGTGAGGCCAATCCAATTTGTGGTAC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGTACCACAAATTGGATaGGCCTCACATGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASVPQIG*ASHAYL
Trigger: CAGATAAGCATGTGAGGCCAATCCAATTTGTGGTAC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTGTGGGTACCACAAATaGGATTGGCCTCACATGCTT +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVCGYHK*DWPHML
Trigger: AAGCATGTGAGGCCAATCCAATTTGTGGTACCCACA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGAACGCTGAATCCACCTaGCATTATCATCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVNAEST*HYHLAQ
Trigger: CTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTTGTCGCTGCATTGGTTaGAATCTAGCCAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFCRCIG*NLAKSF
Trigger: GAAGGATTTGGCTAGATTCAAACCAATGCAGCGACA...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTGGTAGAAATAGTTGCTaGACCATTCCGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFGRNSC*TIPQVL
Trigger: AAGAACCTGCGGAATGGTCAAGCAACTATTTCTACC...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAGGTAGAAATAGTTGCTaGACCATTCCGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAGRNSC*TIPQVL
Trigger: AAGAACCTGCGGAATGGTCAAGCAACTATTTCTACC...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS TCA 90 bp GGTAGTTCTGTCTCAGCCAGTTCAGTTCCAAAGGACTGTAACATCTaGGCCATTTCTTTCACTGTGAGGGCAAAATTTTCTATAGCATTT +
Preference number: 5 (lower is better)
Translates to: GSSVSASSVPKDCNI*AISFTVRAKFSIAF
Trigger: AAATGCTATAGAAAATTTTGCCCTCACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTTTGGAACTGAACTGGCTGAGACAGAACTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS GCA 90 bp GTATCAGTTCATTTAGTACGTGGTTCTTTAAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGGATGGACCAGAACTTCTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VSVHLVRGSLKHPSY*HCPNWRMDQNFSSP
Trigger: AGGAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCACGTACTAAATGAACTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGGGGTTAATTGCTaGTCATCAATGTATGTCAGC +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSASGVNC*SSMYVS
Trigger: GCTGACATACATTGATGACAAGCAATTAACCCCTGA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGACCAGAATTTCTTCTATaGAGGGAATATCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRPEFLL*REYHLV
Trigger: TACCAGATGATATTCCCTCAATAGAAGAAATTCTGG...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGTGCATAATGGTGATTaGCTGCAAGCTTGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVVHNGD*LQACVH
Trigger: ATGGACACAAGCTTGCAGCAAATCACCATTATGCAC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAGAAGGTCCTGCTGAGTaGTATCCGTTTTGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASEGPAE*YPFCFY
Trigger: ATAAAAGCAAAACGGATACAACTCAGCAGGACCTTC...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCAAGGAGTTTATGCATTTaGAAGGTCCTGCTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASRSLCI*KVLLSC
Trigger: ACAACTCAGCAGGACCTTCAAAATGCATAAACTCCT...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGAAAAATTTTCAATGTCTaGGAGAGCTTTCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRKIFNV*ESFLSI
Trigger: GATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTT...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTTATCTGGGCACATACAGACAGTAGCCCTGAACAAAATTTACTCATGCCCCGATTGTATAGTCTTCATTaGAACCTTAAGCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FIWAHTDSSPEQNLLMPRLYSLH*NLKLRR
Trigger: TCTCCTGAGCTTAAGGTTCAAATGAAGACTATACAA...TCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTATGTGCCCAGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATGTGGGTACCACAAATaGGATTGGCCTCACATGCTT +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTCGYHK*DWPHML
Trigger: AAGCATGTGAGGCCAATCCAATTTGTGGTACCCACA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAKTSKL*PLSKLE
Trigger: CTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFKTSKL*PLSKLE
Trigger: CTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTT...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAAACGCTGAATCCACCTaGCATTATCATCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTNAEST*HYHLAQ
Trigger: CTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLFVAPF*CPIQTL
Trigger: CAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAA...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTG +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTFVAPF*CPIQTL
Trigger: CAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCAGTCCAAACTGTATTaGCTTCTGCCTGAACTGACG +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLQSKLY*LLPELT
Trigger: CGTCAGTTCAGGCAGAAGCAAATACAGTTTGGACTG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAACAGTCCAAACTGTATTaGCTTCTGCCTGAACTGACG +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKQSKLY*LLPELT
Trigger: CGTCAGTTCAGGCAGAAGCAAATACAGTTTGGACTG...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCACAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp GTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTTCAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: VLWFLCVSINLKTTSASFQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...AAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATTCAGTCACAAGCTGTaGAAAATCCTGCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAFSHKL*KILLKL
Trigger: AAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGAA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGTGCATAATGGTGATTaGCTGCAAGCTTGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTVHNGD*LQACVH
Trigger: ATGGACACAAGCTTGCAGCAAATCACCATTATGCAC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGGAAGGTCCTGCTGAGTaGTATCCGTTTTGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVEGPAE*YPFCFY
Trigger: ATAAAAGCAAAACGGATACAACTCAGCAGGACCTTC...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGAGGAGTTTATGCATTTaGAAGGTCCTGCTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVRSLCI*KVLLSC
Trigger: ACAACTCAGCAGGACCTTCAAAATGCATAAACTCCT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGTACCACAAATTGGATaGGCCTCACATGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKVPQIG*ASHAYL
Trigger: CAGATAAGCATGTGAGGCCAATCCAATTTGTGGTAC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAAACGCTGAATCCACCTaGCATTATCATCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEINAEST*HYHLAQ
Trigger: CTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAACGCTGAATCCACCTaGCATTATCATCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREENAEST*HYHLAQ
Trigger: CTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATGTCGCTGCATTGGTTaGAATCTAGCCAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKCRCIG*NLAKSF
Trigger: GAAGGATTTGGCTAGATTCAAACCAATGCAGCGACA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGGTAGAAATAGTTGCTaGACCATTCCGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTGRNSC*TIPQVL
Trigger: AAGAACCTGCGGAATGGTCAAGCAACTATTTCTACC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAGGTAGAAATAGTTGCTaGACCATTCCGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKGRNSC*TIPQVL
Trigger: AAGAACCTGCGGAATGGTCAAGCAACTATTTCTACC...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAACCTTGTGGATTAGCTaGTGCTGGACTGCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEITLWIS*CWTAQE
Trigger: TTCTTGAGCAGTCCAGCACAAGCTAATCCACAAGGT...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACACGGTTTCACAAATGTTaGTCCTTAAGACTGTCGCAG +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTRFHKC*SLRLSQ
Trigger: CTGCGACAGTCTTAAGGACAAACATTTGTGAAACCG...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000519895.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCACCAGAATTTCTTCTATaGAGGGAATATCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASPEFLL*REYHLV
Trigger: TACCAGATGATATTCCCTCAATAGAAGAAATTCTGG...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGAGGAGTTTATGCATTTaGAAGGTCCTGCTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLRSLCI*KVLLSC
Trigger: ACAACTCAGCAGGACCTTCAAAATGCATAAACTCCT...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCAAAAATTTTCAATGTCTaGGAGAGCTTTCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAKIFNV*ESFLSI
Trigger: GATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTT...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATTGTATAGTCTTCATTaGAACCTTAAGCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSALYSLH*NLKLRR
Trigger: TCTCCTGAGCTTAAGGTTCAAATGAAGACTATACAA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATCATTGTATAGTCTTCATTaGAACCTTAAGCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: YVLWFLCVSINLKTTSASLYSLH*NLKLRR
Trigger: TCTCCTGAGCTTAAGGTTCAAATGAAGACTATACAA...TGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKTSKL*PLSKLE
Trigger: CTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATGTCGCTGCATTGGTTaGAATCTAGCCAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEICRCIG*NLAKSF
Trigger: GAAGGATTTGGCTAGATTCAAACCAATGCAGCGACA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAACATCTGCATACCAGATTTCAAACTaGCGGTTATCACCTTTTACA +
Preference number: 5 (lower is better)
Translates to: KYVLWFLCVSINLKTTSAYQISN*RLSPFT
Trigger: TGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTA...TGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAATTGTCAACGCAACGTaGATGAAATACGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTIVNAT*MKYELL
Trigger: AAGCAGCTCGTATTTCATCAACGTTGCGTTGACAAT...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACGGTTTCACAAATGTTaGTCCTTAAGACTGTCGCAG +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREERFHKC*SLRLSQ
Trigger: CTGCGACAGTCTTAAGGACAAACATTTGTGAAACCG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414978.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACAGGAAGCCGAGATTTTTaGGAGAGAGATTTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTGSRDF*ERDFER
Trigger: TCTCTCAAAATCTCTCTCCAAAAAATCTCGGCTTCC...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATCAGGGGTTAATTGCTaGTCATCAATGTATGTCAGC +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEISGVNC*SSMYVS
Trigger: GCTGACATACATTGATGACAAGCAATTAACCCCTGA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTTCAGTCACAAGCTGTaGAAAATCCTGCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLFSHKL*KILLKL
Trigger: AAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGAA...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAACATTCAGTCACAAGCTGTaGAAAATCCTGCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: KEKKYVLWFLCVSINLKTFSHKL*KILLKL
Trigger: AAGTTTGAGCAGGATTTTCAACAGCTTGTGACTGAA...TGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATAGAAGGTCCTGCTGAGTaGTATCCGTTTTGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIEGPAE*YPFCFY
Trigger: ATAAAAGCAAAACGGATACAACTCAGCAGGACCTTC...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGAAAATTTTCAATGTCTaGGAGAGCTTTCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVKIFNV*ESFLSI
Trigger: GATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTT...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp TTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTGTACCAGATTTCAAACTaGCGGTTATCACCTTTTACA +
Preference number: 5 (lower is better)
Translates to: FWALYCFTQVKTMGTKAVYQISN*RLSPFT
Trigger: TGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTA...CACAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACAACATCTGCATCATTaGAGCTCAATGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEQHLHH*SSMSFA
Trigger: CGCAAAAGACATTGAGCTCAAATGATGCAGATGTTG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGTTTTGGAGAGAGATTTaGAGAGAAGACCATGTATCC +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLFWREI*REDHVS
Trigger: GGATACATGGTCTTCTCTCAAAATCTCTCTCCAAAA...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATTTTGGAGAGAGATTTaGAGAGAAGACCATGTATCC +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKFWREI*REDHVS
Trigger: GGATACATGGTCTTCTCTCAAAATCTCTCTCCAAAA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS-3UTR CAA 90 bp ATTTCTGGGCTTTGTATTGTTTCACACAAGTTAAAACAATGGGCACAAAAGCTGCCAGAATTTCTTCTATaGAGGGAATATCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: ISGLCIVSHKLKQWAQKLPEFLL*REYHLV
Trigger: TACCAGATGATATTCCCTCAATAGAAGAAATTCTGG...CAGCTTTTGTGCCCATTGTTTTAACTTGTGTGAAACAATACAAAGCCCAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAAAAAATTTTCAATGTCTaGGAGAGCTTTCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKKIFNV*ESFLSI
Trigger: GATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTT...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp ATGAAAGAAAAGAAGTATGTGCTGTGGTTTCTTTGCGTGTCCATTAACCTGAAATACCAGATTTCAAACTaGCGGTTATCACCTTTTACA +
Preference number: 5 (lower is better)
Translates to: MKEKKYVLWFLCVSINLKYQISN*RLSPFT
Trigger: TGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTA...TTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATTTTGGAGAGAGATTTaGAGAGAAGACCATGTATCC +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEFWREI*REDHVS
Trigger: GGATACATGGTCTTCTCTCAAAATCTCTCTCCAAAA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414978.5
ENST00000520602.6
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAACCAGAATTTCTTCTATaGAGGGAATATCATCTGGTA +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEPEFLL*REYHLV
Trigger: TACCAGATGATATTCCCTCAATAGAAGAAATTCTGG...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAAAAATTTTCAATGTCTaGGAGAGCTTTCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEKIFNV*ESFLSI
Trigger: GATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTT...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATTGTATAGTCTTCATTaGAACCTTAAGCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEILYSLH*NLKLRR
Trigger: TCTCCTGAGCTTAAGGTTCAAATGAAGACTATACAA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATTGTATAGTCTTCATTaGAACCTTAAGCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREELYSLH*NLKLRR
Trigger: TCTCCTGAGCTTAAGGTTCAAATGAAGACTATACAA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp CTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAAATATACCAGATTTCAAACTaGCGGTTATCACCTTTTACA +
Preference number: 5 (lower is better)
Translates to: LNNPRHTDCIWLQSREEIYQISN*RLSPFT
Trigger: TGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTA...TATTTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS-3UTR CAA 90 bp AAACTAAATAATCCAAGGCACACCGATTGCATTTGGTTACAAAGTAGAGAAGAATACCAGATTTCAAACTaGCGGTTATCACCTTTTACA +
Preference number: 5 (lower is better)
Translates to: KLNNPRHTDCIWLQSREEYQISN*RLSPFT
Trigger: TGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTA...TTCTTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000520602.6
ENST00000536274.5
CDS CCA 72 bp CAGGACACTGAGGTCCACGGCGCCGAAGCGGCAGCTTaGGGCATGTGCCTGGCCGCCCGCCTTGGCGAACCC +
Preference number: 6 (lower is better)
Translates to: QDTEVHGAEAAA*GMCLAARLGEP
Trigger: GGGTTCGCCAAGGCGGGCGGCCAGGCACATGCCCCAAGCTGCCGCTTCGGCGCCGTGGACCTCAGTGTCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS CCA 72 bp CGTACTTCTCGGCAATCCTCACGCGCTGCAGGGCCATaGCCATGTCCACCTGCAGAGGGATCGCCTGGGCTA +
Preference number: 6 (lower is better)
Translates to: RTSRQSSRAAGP*PCPPAEGSPGL
Trigger: TAGCCCAGGCGATCCCTCTGCAGGTGGACATGGCCATGGCCCTGCAGCGCGTGAGGATTGCCGAGAAGTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS CCA 72 bp AGGGCCATGGCCATGTCCACCTGCAGAGGGATCGCCTaGGCTATCGGCATGAAAGTGCAGCCATCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: RAMAMSTCRGIA*AIGMKVQPSGF
Trigger: GAACCCAGATGGCTGCACTTTCATGCCGATAGCCCAGGCGATCCCTCTGCAGGTGGACATGGCCATGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520602.6
CDS CAA 72 bp CCAGGGAAGGAAGCCGCATTCCTTCTGAACCTCATCTaGCCTCTCCGGGGATTTGCTTCTGCCATTTCGCCT +
Preference number: 6 (lower is better)
Translates to: PGKEAAFLLNLI*PLRGFASAISP
Trigger: AGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTTCCTTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS CAA 90 bp TGCAAGTTCCCAGGGAAGGAAGCCGCATTCCTTCTGAACCTCATCTaGCCTCTCCGGGGATTTGCTTCTGCCATTTCGCCTGTACGCAAT +
Preference number: 6 (lower is better)
Translates to: CKFPGKEAAFLLNLI*PLRGFASAISPVRN
Trigger: ATTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTTCCTTCCCTGGGAACTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS GCA 72 bp TCAGGTGTGGGTACCACAAATTGGATTGGCCTCACATaGTTATCTGCCAGGTTCCTGAAACCAGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SGVGTTNWIGLT*LSARFLKPACW
Trigger: CCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CCA 72 bp ACGGCAGCCAAAAATCTCTATCAAACAAAGCTGCCGTaGCTGCTTCCATTAGCACAGTGGCAGCAATGCTGG +
Preference number: 6 (lower is better)
Translates to: TAAKNLYQTKLP*LLPLAQWQQCW
Trigger: CCAGCATTGCTGCCACTGTGCTAATGGAAGCAGCCACGGCAGCTTTGTTTGATAGAGATTTTTGGCTGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS CAA 90 bp ATGCCTCAGTCCAAACTGTATTTGCTTCTGCCTGAACTGACGCAATaGCCTCACAGACCTCCACCACAGTGCTGGTGTGTTCCAATTCAG +
Preference number: 6 (lower is better)
Translates to: MPQSKLYLLLPELTQ*PHRPPPQCWCVPIQ
Trigger: CTGAATTGGAACACACCAGCACTGTGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATACAGTTTGGACTGAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS TCA 72 bp TGTGATGCCTCAGTCCAAACTGTATTTGCTTCTGCCTaGACTGACGCAATTGCCTCACAGACCTCCACCACA +
Preference number: 6 (lower is better)
Translates to: CDASVQTVFASA*TDAIASQTSTT
Trigger: TGTGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATACAGTTTGGACTGAGGCATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS CAA 72 bp TCCAAACTGTATTTGCTTCTGCCTGAACTGACGCAATaGCCTCACAGACCTCCACCACAGTGCTGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: SKLYLLLPELTQ*PHRPPPQCWCV
Trigger: AACACACCAGCACTGTGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTCAGGCAGAAGCAAATACAGTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS CAA 90 bp TGGTGTCCCAGATGTGACCAAATTTTCAGGTGTGGGTACCACAAATaGGATTGGCCTCACATGCTTATCTGCCAGGTTCCTGAAACCAGC +
Preference number: 6 (lower is better)
Translates to: WCPRCDQIFRCGYHK*DWPHMLICQVPETS
Trigger: GCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGTCACATCTGGGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS GCA 72 bp GCATTTCTGAAGATGATCCATTCACTGTGGCAGTACTaGAAGGTGCCGCCTAACTCAGGGGTTAATTGCTTG +
Preference number: 6 (lower is better)
Translates to: AFLKMIHSLWQY*KVPPNSGVNCL
Trigger: CAAGCAATTAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGAATGGATCATCTTCAGAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS GCA 72 bp GAACTGACGCAATTGCCTCACAGACCTCCACCACAGTaGTGGTGTGTTCCAATTCAGTTTCCTCAGTACTTA +
Preference number: 6 (lower is better)
Translates to: ELTQLPHRPPPQ*WCVPIQFPQYL
Trigger: TAAGTACTGAGGAAACTGAATTGGAACACACCAGCACTGTGGTGGAGGTCTGTGAGGCAATTGCGTCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS TCA 72 bp CTTTCCAGGAAACAAGGTCCCACTCTTTCTGGAGCATaGGCACAATTTTCCAGGCTGCTCAAGAAAATGTCG +
Preference number: 6 (lower is better)
Translates to: LSRKQGPTLSGA*AQFSRLLKKMS
Trigger: CGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGTGGGACCTTGTTTCCTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 72 bp CCATTCCGCAGGTTCTTCAGAGATTTCTGCAGATTGTaGTGCCTCAGTCCAAACTGTATTTGCTTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PFRRFFRDFCRL*CLSPNCICFCL
Trigger: CAGGCAGAAGCAAATACAGTTTGGACTGAGGCATCACAATCTGCAGAAATCTCTGAAGAACCTGCGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
CDS GCA 72 bp ATTCCTTCTGAACCTCATCTTGCCTCTCCGGGGATTTaGTTCTGCCATTTCGCCTGTACGCAATTACACTTT +
Preference number: 6 (lower is better)
Translates to: IPSEPHLASPGI*FCHFACTQLHF
Trigger: AAAGTGTAATTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS CCA 72 bp GACCAAATTTTCAGGTGTGGGTACCACAAATTGGATTaGCCTCACATGCTTATCTGCCAGGTTCCTGAAACC +
Preference number: 6 (lower is better)
Translates to: DQIFRCGYHKLD*PHMLICQVPET
Trigger: GGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CCA 72 bp GATGTGACCAAATTTTCAGGTGTGGGTACCACAAATTaGATTGGCCTCACATGCTTATCTGCCAGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: DVTKFSGVGTTN*IGLTCLSARFL
Trigger: CAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 72 bp CACCACTTATTTGCCGATGACATTCTAGTCTTGAACTaGCAGCTCCTTCAGTGTCAGGCACTTCCAGATTTG +
Preference number: 6 (lower is better)
Translates to: HHLFADDILVLN*QLLQCQALPDL
Trigger: CAAATCTGGAAGTGCCTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 72 bp ATTGGATTGGCCTCACATGCTTATCTGCCAGGTTCCTaGAACCAGCCTGCTGGTTCTCAAATATACTTCGAA +
Preference number: 6 (lower is better)
Translates to: IGLASHAYLPGS*NQPAGSQIYFE
Trigger: TTCGAAGTATATTTGAGAACCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS GCA 72 bp TCTGAACCTCATCTTGCCTCTCCGGGGATTTGCTTCTaGCATTTCGCCTGTACGCAATTACACTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SEPHLASPGICF*HFACTQLHFSF
Trigger: AAAAGAAAAGTGTAATTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS CCA 72 bp TTTTCTATAGCATTTCTGAAGATGATCCATTCACTGTaGCAGTACTGCAAGGTGCCGCCTAACTCAGGGGTT +
Preference number: 6 (lower is better)
Translates to: FSIAFLKMIHSL*QYCKVPPNSGV
Trigger: AACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGAATGGATCATCTTCAGAAATGCTATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS CAA 72 bp AGATGTGACCAAATTTTCAGGTGTGGGTACCACAAATaGGATTGGCCTCACATGCTTATCTGCCAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: RCDQIFRCGYHK*DWPHMLICQVP
Trigger: AGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATTTGGTCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 72 bp AAATTACAGTTTTCTGGAAACGTAATGATCCAAGCATaGTCCTTTCCCCGGCCACCAGACAAGAAGGCGATG +
Preference number: 6 (lower is better)
Translates to: KLQFSGNVMIQA*SFPRPPDKKAM
Trigger: CATCGCCTTCTTGTCTGGTGGCCGGGGAAAGGACAATGCTTGGATCATTACGTTTCCAGAAAACTGTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS TCA 72 bp TCCAAACTGGAGGATGGACCAGAACTTCTCTTCTCCTaGCAATCAGGCACCACTTCAATTTTTAAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SKLEDGPELLFS*QSGTTSIFKLL
Trigger: GAGCAACTTAAAAATTGAAGTGGTGCCTGATTGTCAGGAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000483690.1
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 90 bp GCTCATTGCACCTCTGGCAGATTAAATCAAGTGCATAATGGTGATTaGCTGCAAGCTTGTGTCCATGTAATATCACAAACTGGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: AHCTSGRLNQVHNGD*LQACVHVISQTGPL
Trigger: CAAAGGCCCAGTTTGTGATATTACATGGACACAAGCTTGCAGCAAATCACCATTATGCACTTGATTTAATCTGCCAGAGGTGCAATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS GCA 72 bp CTAGCCAAATCCTTCATTTTTGTAGCACCTTTCTTGTaGCCTATCCAAACGCTGAATCCACCTTGCATTATC +
Preference number: 6 (lower is better)
Translates to: LAKSFIFVAPFL*PIQTLNPPCII
Trigger: GATAATGCAAGGTGGATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAAAATGAAGGATTTGGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 72 bp CAATCTTCGATCCAGAATAATGGTAAACCGGGAGTCTaGTCCATTTTGCCTTGCAATAGATGTCAGGTAAGT +
Preference number: 6 (lower is better)
Translates to: QSSIQNNGKPGV*SILPCNRCQVS
Trigger: ACTTACCTGACATCTATTGCAAGGCAAAATGGATCAGACTCCCGGTTTACCATTATTCTGGATCGAAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
CDS GCA 72 bp CATTTAGTACGTGGTTCTTTAAAACATCCAAGCTATTaGCATTGTCCAAACTGGAGGATGGACCAGAACTTC +
Preference number: 6 (lower is better)
Translates to: HLVRGSLKHPSY*HCPNWRMDQNF
Trigger: GAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCACGTACTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 72 bp GATACCTTTCAGCACGAATTGCCAGAATTTCTTCTATaGAGGGAATATCATCTGGTAGTTCTGTCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: DTFQHELPEFLL*REYHLVVLSQP
Trigger: TGGCTGAGACAGAACTACCAGATGATATTCCCTCAATAGAAGAAATTCTGGCAATTCGTGCTGAAAGGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 72 bp AATCTAGCCAAATCCTTCATTTTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTGAATCCACCTTGCATT +
Preference number: 6 (lower is better)
Translates to: NLAKSFIFVAPF*CPIQTLNPPCI
Trigger: AATGCAAGGTGGATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAAAATGAAGGATTTGGCTAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 90 bp TCAACAGATGATACCTTTCAGCACGAATTGCCAGAATTTCTTCTATaGAGGGAATATCATCTGGTAGTTCTGTCTCAGCCAGTTCAGTTC +
Preference number: 6 (lower is better)
Translates to: STDDTFQHELPEFLL*REYHLVVLSQPVQF
Trigger: GAACTGAACTGGCTGAGACAGAACTACCAGATGATATTCCCTCAATAGAAGAAATTCTGGCAATTCGTGCTGAAAGGTATCATCTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 90 bp TGTATCAGTTCATTTAGTACGTGGTTCTTTAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAGGATGGACCAGAACTTCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CISSFSTWFFKTSKL*PLSKLEDGPELLFS
Trigger: GGAGAAGAGAAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCACGTACTAAATGAACTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 90 bp ATTGGTTTGAATCTAGCCAAATCCTTCATTTTTGTAGCACCTTTCTaGTGCCCTATCCAAACGCTGAATCCACCTTGCATTATCATCTTG +
Preference number: 6 (lower is better)
Translates to: IGLNLAKSFIFVAPF*CPIQTLNPPCIIIL
Trigger: CAAGATGATAATGCAAGGTGGATTCAGCGTTTGGATAGGGCACAAGAAAGGTGCTACAAAAATGAAGGATTTGGCTAGATTCAAACCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS TCA 72 bp TTATTAATAGTTTGCCAGTCACCACTTATTTGCCGATaGCATTCTAGTCTTGAACTGACAGCTCCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: LLIVCQSPLICR*HSSLELTAPSV
Trigger: CACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGGTGACTGGCAAACTATTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CCA 72 bp TGTCAACGCAACGTTGATGAAATACGAGCTGCTTCTTaGGTAGTATTTAAAAACGGCAGCCAAAAATCTCTA +
Preference number: 6 (lower is better)
Translates to: CQRNVDEIRAAS*VVFKNGSQKSL
Trigger: TAGAGATTTTTGGCTGCCGTTTTTAAATACTACCCAAGAAGCAGCTCGTATTTCATCAACGTTGCGTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370576.9
ENST00000536274.5
CDS CAA 72 bp TCATTTAGTACGTGGTTCTTTAAAACATCCAAGCTATaGCCATTGTCCAAACTGGAGGATGGACCAGAACTT +
Preference number: 6 (lower is better)
Translates to: SFSTWFFKTSKL*PLSKLEDGPEL
Trigger: AAGTTCTGGTCCATCCTCCAGTTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCACGTACTAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS GCA 72 bp CCACTCTTTCTGGAGCATGAGCACAATTTTCCAGGCTaGTCAAGAAAATGTCGTTATGGAATTCATATATTT +
Preference number: 6 (lower is better)
Translates to: PLFLEHEHNFPG*SRKCRYGIHIF
Trigger: AAATATATGAATTCCATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 72 bp ACCTCTGGCAGATTAAATCAAGTGCATAATGGTGATTaGCTGCAAGCTTGTGTCCATGTAATATCACAAACT +
Preference number: 6 (lower is better)
Translates to: TSGRLNQVHNGD*LQACVHVISQT
Trigger: AGTTTGTGATATTACATGGACACAAGCTTGCAGCAAATCACCATTATGCACTTGATTTAATCTGCCAGAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 72 bp CCTGGAAAAATGCGCATTCTGAATACTTCCTCCAAATaGTTTCTGATCTGGGCTTATTCTGACAATATTTTG +
Preference number: 6 (lower is better)
Translates to: PGKMRILNTSSK*FLIWAYSDNIL
Trigger: CAAAATATTGTCAGAATAAGCCCAGATCAGAAACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTCCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000437564.5
ENST00000446225.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5
CDS CAA 72 bp GTTCTCAAATATACTTCGAATGTTTTCAAGCTTGAGTaGTATAGTCTTCATTTGAACCTTAAGCTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: VLKYTSNVFKLE*YSLHLNLKLRR
Trigger: TCTCCTGAGCTTAAGGTTCAAATGAAGACTATACAACTCAAGCTTGAAAACATTCGAAGTATATTTGAGAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338585.6
ENST00000370573.8
ENST00000370576.9
ENST00000414978.5
ENST00000519895.5
ENST00000520602.6
ENST00000536274.5