Pregenerated sensors for MCEE (Homo sapiens)
Ensembl gene IDs: ENSG00000124370Ensembl transcript IDs: ENST00000244217.6, ENST00000413592.5, ENST00000462609.2, ENST00000486135.1, ENST00000494660.6
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTTACGGCATTCGCGGCTaGAGCCTTCAGCACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSYGIRG*SLQHPR Trigger: GCGCGGGTGCTGAAGGCTGCAGCCGCGAATGCCGTA...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTCTATGGCTACATGGTTaGGTCGACCCAGGTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSLWLHG*VDPGST Trigger: TGTGGAACCTGGGTCGACTCAACCATGTAGCCATAG...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTACCTCGATGCAGATGTaGTGCATTCCTCCAGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSTSMQM*CIPPAL Trigger: CAAGGCTGGAGGAATGCATCACATCTGCATCGAGGT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTACAGAACCTGTCACTTaGTCCAAGGGCTGTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSTEPVT*SKGCDV Trigger: CACATCACAGCCCTTGGATCAAGTGACAGGTTCTGT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR CCA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTAACTGCTATGGCTACATaGTTGAGTCGACCCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FNCELLHDGSSEGLNVIVTAMAT*LSRPRF Trigger: GAACCTGGGTCGACTCAACCATGTAGCCATAGCAGT...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTTTGATCCAAGGGCTGTaGTGTGGAAGAAGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSLIQGL*CGRSSY Trigger: GTAAGAGCTTCTTCCACATCACAGCCCTTGGATCAA...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTTCACGTCCCAATGGATaGAGCAGTTCCATCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSSRPNG*SSSILV Trigger: TACCAAGATGGAACTGCTTCATCCATTGGGACGTGA...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR CCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTACCGCTTCACTTACCTaGGCCCCCAGAATATTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSTASLT*APRIFL Trigger: TAAGAATATTCTGGGGGCCCAGGTAAGTGAAGCGGT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR CCA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACAGAAAACCTGCAATTaGACTGTCACGTCCCAATGG | + |
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Preference number: 4 (lower is better) Translates to: FNCELLHDGSSEGLNVIVQKTCN*TVTSQW Trigger: CCATTGGGACGTGACAGTCCAATTGCAGGTTTTCTG...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTCATGTGCTCCTATTTTaGCCTCTTCACTTAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSHVLLF*PLHLDC Trigger: GCAGTCTAAGTGAAGAGGTCAAAATAGGAGCACATG...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR TCA 90 bp | AATTCAGTCTTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATCATGTGCTCCTATTTTaGCCTCTTCACTTAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: NSVFNCELLHDGSSEGLNHVLLF*PLHLDC Trigger: GCAGTCTAAGTGAAGAGGTCAAAATAGGAGCACATG...ATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAAGACTGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTTTCCAAATCTGGCACTaGTATGGCTACATGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSFQIWH*YGYMVE Trigger: CTCAACCATGTAGCCATAGCAGTGCCAGATTTGGAA...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | AATTCAGTCTTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATTTCCAAATCTGGCACTaGTATGGCTACATGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: NSVFNCELLHDGSSEGLNFQIWH*YGYMVE Trigger: CTCAACCATGTAGCCATAGCAGTGCCAGATTTGGAA...ATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAAGACTGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTATTTCTGCAGAAAACCTaGAATTGGACTGTCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: FNCELLHDGSSEGLNVIVFLQKT*NWTVTS Trigger: GGACGTGACAGTCCAATTGCAGGTTTTCTGCAGAAA...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR CCA 90 bp | GAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATACTGTCACGTCCCAATaGATGAAGCAGTTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: ELLHDGSSEGLNVIVHFDTVTSQ*MKQFHL Trigger: AAGATGGAACTGCTTCATCCATTGGGACGTGACAGT...ATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR GCA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTATATTATCCACCTCGATaGAGATGTGATGCATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FNCELLHDGSSEGLNVIVYYPPR*RCDAFL Trigger: GAGGAATGCATCACATCTGCATCGAGGTGGATAATA...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR GCA 90 bp | GAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATCACTGGTTTTCCATGTaGTCCTATTTTGACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ELLHDGSSEGLNVIVHFDHWFSM*SYFDLF Trigger: GAAGAGGTCAAAATAGGAGCACATGGAAAACCAGTG...ATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACACTGGTTTTCCATGTaGTCCTATTTTGACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FNCELLHDGSSEGLNVIVHWFSM*SYFDLF Trigger: GAAGAGGTCAAAATAGGAGCACATGGAAAACCAGTG...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR CCA 90 bp | GAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGAAGCTCTTACTGTTaGAATGGGAGCTTGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ELLHDGSSEGLNVIVHFDRSSYC*NGSLKS Trigger: AGACTTCAAGCTCCCATTCCAACAGTAAGAGCTTCT...ATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR TCA 90 bp | GAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATTGGTATTTCCCAGGTTaGCAAAAACAACAGATACTC | + |
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Preference number: 4 (lower is better) Translates to: ELLHDGSSEGLNVIVHFDWYFPG*QKQQIL Trigger: GAGTATCTGTTGTTTTTGTCAACCTGGGAAATACCA...ATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR GCA 90 bp | AATTCAGTCTTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATCAAATCCATCACAGCTaGATTAATATTATCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: NSVFNCELLHDGSSEGLNQIHHS*INIIHL Trigger: GAGGTGGATAATATTAATGCAGCTGTGATGGATTTG...ATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAAGACTGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR GCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTAATATAAATCAAGCTTaGTCCAGTTCCACAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSNINQA*SSSTRT Trigger: AGTCCTTGTGGAACTGGAGCAAGCTTGATTTATATT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTAAATATAAATCAAGCTTaGTCCAGTTCCACAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: FNCELLHDGSSEGLNVIVNINQA*SSSTRT Trigger: AGTCCTTGTGGAACTGGAGCAAGCTTGATTTATATT...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | AATTCAGTCTTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATCAAATCCATCACAGCTaGATTAATATTATCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: NSVFNCELLHDGSSEGLNQIHHS*INIIHL Trigger: CAGGTGGATAATATTAATGCAGCTGTGATGGATTTG...ATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAAGACTGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413592.5 |
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| CDS-3UTR CCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTTTAATATTATCCACCTaGGCCCCCAGAATATTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSLILST*APRIFL Trigger: TAAGAATATTCTGGGGGCCCAGGTGGATAATATTAA...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | AATTCAGTCTTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATATTCTTATAAAATGCTaGAGCCTTTTCCAAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: NSVFNCELLHDGSSEGLNILIKC*SLFQIW Trigger: CCAGATTTGGAAAAGGCTGCAGCATTTTATAAGAAT...ATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAAGACTGAATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR GCA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTATTCTTATAAAATGCTaGAGCCTTTTCCAAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSILIKC*SLFQIW Trigger: CCAGATTTGGAAAAGGCTGCAGCATTTTATAAGAAT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS GCA 90 bp | ACGCTTGGAGTTCGGCCGACTAGTAGTTGTTGTTTTTACGGAACGTaGTCTCCTTTCTGGTTTCTCCCCAGTCTACGGCATTCGCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TLGVRPTSSCCFYGT*SPFWFLPSLRHSRL Trigger: CAGCCGCGAATGCCGTAGACTGGGGAGAAACCAGAAAGGAGAGCACGTTCCGTAAAAACAACAACTACTAGTCGGCCGAACTCCAAGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486135.1 |
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| CDS TCA 90 bp | TCGACCCAGGTTCCACACAGAACCTGTCACTTGATCCAAGGGCTGTaGTGTGGAAGAAGCTCTTACTGTTGGAATGGGAGCTTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: STQVPHRTCHLIQGL*CGRSSYCWNGSLKS Trigger: AGACTTCAAGCTCCCATTCCAACAGTAAGAGCTTCTTCCACATCACAGCCCTTGGATCAAGTGACAGGTTCTGTGTGGAACCTGGGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS TCA 90 bp | CACTCTAGGAGGAGCAGATGTGTCTCTCTATACTTGACGGAGAAATaGTCTGCCTCTATCTTGGAAAGTCACCCACTTAGACTGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: HSRRSRCVSLYLTEK*SASILESHPLRLGT Trigger: GGTTCCCAGTCTAAGTGGGTGACTTTCCAAGATAGAGGCAGATCATTTCTCCGTCAAGTATAGAGAGACACATCTGCTCCTCCTAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462609.2 |
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| CDS TCA 90 bp | CACGTCCCAATGGATGAAGCAGTTCCATCTTGGTATTTCCCAGGTTaGCAAAAACAACAGATACTCCATGTTCAGGAAGAGGGACCGCTT | + |
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Preference number: 5 (lower is better) Translates to: HVPMDEAVPSWYFPG*QKQQILHVQEEGPL Trigger: AAGCGGTCCCTCTTCCTGAACATGGAGTATCTGTTGTTTTTGTCAACCTGGGAAATACCAAGATGGAACTGCTTCATCCATTGGGACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS TCA 90 bp | CCACTTATGGACACTCTAGGAGGAGCAGATGTGTCTCTCTATACTTaGCGGAGAAATGATCTGCCTCTATCTTGGAAAGTCACCCACTTA | + |
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Preference number: 5 (lower is better) Translates to: PLMDTLGGADVSLYT*RRNDLPLSWKVTHL Trigger: TAAGTGGGTGACTTTCCAAGATAGAGGCAGATCATTTCTCCGTCAAGTATAGAGAGACACATCTGCTCCTCCTAGAGTGTCCATAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462609.2 |
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| CDS GCA 90 bp | CAGAATATTCTTATAAAATGCTGCAGCCTTTTCCAAATCTGGCACTaGTATGGCTACATGGTTGAGTCGACCCAGGTTCCACACAGAACC | + |
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Preference number: 5 (lower is better) Translates to: QNILIKCCSLFQIWH*YGYMVESTQVPHRT Trigger: GGTTCTGTGTGGAACCTGGGTCGACTCAACCATGTAGCCATAGCAGTGCCAGATTTGGAAAAGGCTGCAGCATTTTATAAGAATATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS-3UTR CAA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTGCAGAAAACCTGCAATaGGACTGTCACGTCCCAATG | + |
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Preference number: 5 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSAENLQ*DCHVPM Trigger: CATTGGGACGTGACAGTCCAATTGCAGGTTTTCTGC...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR CAA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTAAGAAGCTCTTACTGTaGGAATGGGAGCTTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSKKLLL*EWELEV Trigger: GACTTCAAGCTCCCATTCCAACAGTAAGAGCTTCTT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000244217.6 |
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| CDS-3UTR CAA 90 bp | TTTAACTGTGAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACCATGTGCTCCTATTTaGACCTCTTCACTTAGACTG | + |
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Preference number: 5 (lower is better) Translates to: FNCELLHDGSSEGLNVIVPCAPI*TSSLRL Trigger: CAGTCTAAGTGAAGAGGTCAAAATAGGAGCACATGG...TACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTCACAGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR CAA 90 bp | GAACTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAAATATAAATCAAGCTaGCTCCAGTTCCACAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: ELLHDGSSEGLNVIVHFDKYKSS*LQFHKD Trigger: GTCCTTGTGGAACTGGAGCAAGCTTGATTTATATTT...ATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS-3UTR CAA 90 bp | CTTTTACATGATGGAAGCAGTGAAGGACTCAATGTCATAGTACATTTTGATAGTAAATATAAATCAAGCTaGCTCCAGTTCCACAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LLHDGSSEGLNVIVHFDSKYKSS*LQFHKD Trigger: GTCCTTGTGGAACTGGAGCAAGCTTGATTTATATTT...ACTATCAAAATGTACTATGACATTGAGTCCTTCACTGCTTCCATCATGTAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000244217.6 ENST00000413592.5 |
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| CDS CCA 72 bp | CCGCCCCCGACCGCCGTTCCCACGCTCCCTGTCCCATaGCGAAGGTCGCCGGTGCCCGGTATTCACCTACGG | + |
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Preference number: 6 (lower is better) Translates to: PPPTAVPTLPVP*RRSPVPGIHLR Trigger: CCGTAGGTGAATACCGGGCACCGGCGACCTTCGCCATGGGACAGGGAGCGTGGGAACGGCGGTCGGGGGCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494660.6 |
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| CDS GCA 72 bp | TTCCCACGCTCCCTGTCCCATGGCGAAGGTCGCCGGTaGCCGGTATTCACCTACGGCATTCGCGGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FPRSLSHGEGRR*PVFTYGIRGCS Trigger: GCTGCAGCCGCGAATGCCGTAGGTGAATACCGGGCACCGGCGACCTTCGCCATGGGACAGGGAGCGTGGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494660.6 |
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| CDS TCA 72 bp | CGATCCGCTTCTATTTACTTCTGTCCCTGCCCTGCCTaGCCTGCCGGGCAAGTTCCCTCGACTCTCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSASIYFCPCPA*PAGQVPSTLPP Trigger: GGGCGGGAGAGTCGAGGGAACTTGCCCGGCAGGTCAGGCAGGGCAGGGACAGAAGTAAATAGAAGCGGATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494660.6 |
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| CDS CCA 72 bp | GTGCAGAGCCCAAGGCGCACAGCTCTCGGATGGAAATaGGACTCATGCACAAGGCAATCCCCGCTACTAAGC | + |
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Preference number: 6 (lower is better) Translates to: VQSPRRTALGWK*DSCTRQSPLLS Trigger: GCTTAGTAGCGGGGATTGCCTTGTGCATGAGTCCCATTTCCATCCGAGAGCTGTGCGCCTTGGGCTCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494660.6 |
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| CDS GCA 72 bp | CTTTCTGGTTTCTCCCCAGTCTACGGCATTCGCGGCTaGAGCCTTCAGCACCCGCGCCATTTTGGAAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSGFSPVYGIRG*SLQHPRHFGKQ Trigger: TTGCTTTCCAAAATGGCGCGGGTGCTGAAGGCTGCAGCCGCGAATGCCGTAGACTGGGGAGAAACCAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486135.1 |
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| CDS CCA 72 bp | AGTAGTTGTTGTTTTTACGGAACGTGCTCTCCTTTCTaGTTTCTCCCCAGTCTACGGCATTCGCGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSCCFYGTCSPF*FLPSLRHSRLQ Trigger: CTGCAGCCGCGAATGCCGTAGACTGGGGAGAAACCAGAAAGGAGAGCACGTTCCGTAAAAACAACAACTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486135.1 |
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| CDS TCA 72 bp | GTTCCACACAGAACCTGTCACTTGATCCAAGGGCTGTaGTGTGGAAGAAGCTCTTACTGTTGGAATGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VPHRTCHLIQGL*CGRSSYCWNGS Trigger: GCTCCCATTCCAACAGTAAGAGCTTCTTCCACATCACAGCCCTTGGATCAAGTGACAGGTTCTGTGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS TCA 72 bp | TTGAGTCGACCCAGGTTCCACACAGAACCTGTCACTTaGTCCAAGGGCTGTGATGTGGAAGAAGCTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: LSRPRFHTEPVT*SKGCDVEEALT Trigger: AGTAAGAGCTTCTTCCACATCACAGCCCTTGGATCAAGTGACAGGTTCTGTGTGGAACCTGGGTCGACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS CAA 90 bp | CACCCGGCCAGAATTCACAATCTTCAGGTACATCTCATAACCTCTTaGGTCCTCAGCTTCCCCATCTCACTAGCCTGTTACTTTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: HPARIHNLQVHLITS*VLSFPISLACYFEV Trigger: AACTTCAAAGTAACAGGCTAGTGAGATGGGGAAGCTGAGGACCAAAGAGGTTATGAGATGTACCTGAAGATTGTGAATTCTGGCCGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462609.2 |
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| CDS GCA 72 bp | CTTATAAAATGCTGCAGCCTTTTCCAAATCTGGCACTaGTATGGCTACATGGTTGAGTCGACCCAGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LIKCCSLFQIWH*YGYMVESTQVP Trigger: TGGAACCTGGGTCGACTCAACCATGTAGCCATAGCAGTGCCAGATTTGGAAAAGGCTGCAGCATTTTATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS CCA 72 bp | CTGCAGAAAACCTGCAATTGGACTGTCACGTCCCAATaGATGAAGCAGTTCCATCTTGGTATTTCCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LQKTCNWTVTSQ*MKQFHLGISQV Trigger: AACCTGGGAAATACCAAGATGGAACTGCTTCATCCATTGGGACGTGACAGTCCAATTGCAGGTTTTCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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| CDS TCA 72 bp | GACACTCTAGGAGGAGCAGATGTGTCTCTCTATACTTaGCGGAGAAATGATCTGCCTCTATCTTGGAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: DTLGGADVSLYT*RRNDLPLSWKV Trigger: GACTTTCCAAGATAGAGGCAGATCATTTCTCCGTCAAGTATAGAGAGACACATCTGCTCCTCCTAGAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462609.2 |
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| CDS TCA 72 bp | AGGAGCAGATGTGTCTCTCTATACTTGACGGAGAAATaGTCTGCCTCTATCTTGGAAAGTCACCCACTTAGA | + |
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Preference number: 6 (lower is better) Translates to: RSRCVSLYLTEK*SASILESHPLR Trigger: TCTAAGTGGGTGACTTTCCAAGATAGAGGCAGATCATTTCTCCGTCAAGTATAGAGAGACACATCTGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462609.2 |
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| CDS CAA 72 bp | AGAATTCACAATCTTCAGGTACATCTCATAACCTCTTaGGTCCTCAGCTTCCCCATCTCACTAGCCTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: RIHNLQVHLITS*VLSFPISLACY Trigger: GTAACAGGCTAGTGAGATGGGGAAGCTGAGGACCAAAGAGGTTATGAGATGTACCTGAAGATTGTGAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462609.2 |
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| CDS TCA 72 bp | ATGGATGAAGCAGTTCCATCTTGGTATTTCCCAGGTTaGCAAAAACAACAGATACTCCATGTTCAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: MDEAVPSWYFPG*QKQQILHVQEE Trigger: CTCTTCCTGAACATGGAGTATCTGTTGTTTTTGTCAACCTGGGAAATACCAAGATGGAACTGCTTCATCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000244217.6 ENST00000486135.1 ENST00000494660.6 |
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