RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000078070

Ensembl transcript IDs: ENST00000265594.9, ENST00000466650.5, ENST00000476176.5, ENST00000486226.1, ENST00000487634.5, ENST00000490284.5, ENST00000492597.5, ENST00000495767.5, ENST00000497830.5, ENST00000497959.5, ENST00000610757.4, ENST00000629669.2

Found 716 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATaGGGTCATAATGCACGGAAACTTCGTCTCCTTGCCGTACTCCAG +
Preference number: 1 (lower is better)
Translates to: MPPGDLLPTRPASQS*GHNARKLRLLAVLQ
Trigger: CTGGAGTACGGCAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp ACGAAGGCTGTACCTCAGTTTTGTCAATGCCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGA +
Preference number: 1 (lower is better)
Translates to: TKAVPQFCQCRLAIC*PHDQLRNHGVIMHG
Trigger: TCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp CTGACGAAGGCTGTACCTCAGTTTTGTCAATGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCAC +
Preference number: 1 (lower is better)
Translates to: LTKAVPQFCQCRLAI*CPHDQLRNHGVIMH
Trigger: GTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 90 bp GTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCTGCAGCCTTCCGACTGAGCAACAAC +
Preference number: 1 (lower is better)
Translates to: VSVMAFSLRMRPRAA*HKDSLAAAFRLSNN
Trigger: GTTGTTGCTCAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 90 bp GACAGGATAGCCAATTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGC +
Preference number: 1 (lower is better)
Translates to: DRIANSPGVFLQALV*LVLTMITLHNRYSS
Trigger: GCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp CCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACAGGCATGAAGTTATTGCTAGGATCT +
Preference number: 1 (lower is better)
Translates to: PVSILVEGSARGVER*TNGPATGMKLLLGS
Trigger: AGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 90 bp TCTTTGGCTGCAGCCTTCCGACTGAGCAACAACTGTTTGTGGTGTTaGGGGATGAAATCAGTGTGCACGTTCCCAGCTTCAAACTCTGGG +
Preference number: 1 (lower is better)
Translates to: SLAAAFRLSNNCLWC*GMKSVCTFPASNSG
Trigger: CCCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAGCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp TCCAACAATATTGTACTGACGAAGGCTGTACCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATCAT +
Preference number: 1 (lower is better)
Translates to: SNNIVLTKAVPQFCQ*RLAICCPHDQLRNH
Trigger: ATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTaGCATGGTGATCACCAAACACCTGGACTTCTACATGCCTCGGTG +
Preference number: 1 (lower is better)
Translates to: VASAHYSLFQTSTQH*HGDHQTPGLLHASV
Trigger: CACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 90 bp CAGTGTGCACGTTCCCAGCTTCAAACTCTGGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGGTGTGCAGTCCAACAATATTGTACT +
Preference number: 1 (lower is better)
Translates to: QCARSQLQTLGGQTG*VRSQCWCAVQQYCT
Trigger: AGTACAATATTGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACGTGCACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 90 bp TGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTaGTCACCAAACACCTGGACTTCTACATGCCTCGGTGTGTCTACA +
Preference number: 1 (lower is better)
Translates to: CTLQSLSNKYTALPW*SPNTWTSTCLGVST
Trigger: TGTAGACACACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 90 bp ACTTCAGATTTAATACCAGGCGCTGGGGCCTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACA +
Preference number: 1 (lower is better)
Translates to: TSDLIPGAGASSMIF*CRLCTLQSLSNKYT
Trigger: TGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAATCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp TTGCTAGGATCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGGCTCAAAGGAATCTTCTCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: LLGSSAYILASKAWP*RVISSWLKGIFSPA
Trigger: AGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 90 bp AGGGGCCGCCCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTaGGGACTGGAATGTCAATCTCAATACTTCCTTCCTTGGAAAATA +
Preference number: 1 (lower is better)
Translates to: RGRPEFLVSSQKISI*GLECQSQYFLPWKI
Trigger: TATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
3UTR CCA 90 bp AAGTTATTGCTAGGATCTTCTGCATATATTCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCTTCCTGGCTCAAAGGAATCTTCTCT +
Preference number: 1 (lower is better)
Translates to: KLLLGSSAYILASKA*PCRVISSWLKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 90 bp TTTATTGTAGTGGTCTGGAACCAAACCTGTAATAACTCCAGAGTATaGCTAGATTACATGAGTATGGAAATGGTTGATTATCCGAGGAGA +
Preference number: 1 (lower is better)
Translates to: FIVVVWNQTCNNSRV*LDYMSMEMVDYPRR
Trigger: TCTCCTCGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGAGTTATTACAGGTTTGGTTCCAGACCACTACAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
3UTR CCA 90 bp CAATCTGCATGCTATAAGACCCATCATGGTTATACGTTACAGCTATaGCTACATTTTATTGTAGTGGTCTGGAACCAAACCTGTAATAAC +
Preference number: 1 (lower is better)
Translates to: QSACYKTHHGYTLQL*LHFIVVVWNQTCNN
Trigger: GTTATTACAGGTTTGGTTCCAGACCACTACAATAAAATGTAGCCATAGCTGTAACGTATAACCATGATGGGTCTTATAGCATGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
3UTR-3UTR TCA 90 bp AAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATCTGCAGCCTTCCGACTaGGCAACAACTGTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: KVSVMAFSLRMRPRAAWHLQPSD*ATTVCG
Trigger: ACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAG...ATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp TTTGTGGTGTTGAGGGATGAAATCAGTGTGCACGTTCCCAGCTTCAAACTCTGGTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 2 (lower is better)
Translates to: FVVLRDEISVHVPSFKLWCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...CCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CAA 90 bp TGTGCAGTCCAACAATATTGTACTGACGAAGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCG +
Preference number: 2 (lower is better)
Translates to: CAVQQYCTDEGCTSV*SMPPGDLLPTRPAS
Trigger: CGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGGACTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR TCA 90 bp GGCATGGCCCTGCAGAGTTATTTCTTCCTGGCTCAAAGGAATCTTCTCTCCTGCCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 2 (lower is better)
Translates to: GMALQSYFFLAQRNLLSCLGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...GCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR TCA 90 bp GTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATAAAGACTCTACAGCATTGCCATGGTaGTCACCAAACACCTGGACT +
Preference number: 2 (lower is better)
Translates to: VMAFSLRMRPRAAWHKDSTALPW*SPNTWT
Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGT...AGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp CTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCGCTTCAAACTCTGGGTaGCCAGACAGGTTGAGTAAG +
Preference number: 2 (lower is better)
Translates to: LKSESVGHGFLLEDETQGASNSG*PDRLSK
Trigger: CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGC...GCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp TCCTGGATGGATAGCCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCT +
Preference number: 2 (lower is better)
Translates to: SWMDSLCSRGLGHLNDFLRERGR*NMLHLP
Trigger: AGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...GAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
3UTR-3UTR GCA 90 bp ATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTAGATTTGGATGTGCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 2 (lower is better)
Translates to: IGPHHDNPPQQVLQQQPLDLDVL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATC...TAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp TCTGCTCGAGGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTAGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: SARGVERCTNGPATGMKLAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...TAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp GATATTCAGTCTTCTTCCACTGCTAGACGAAAATGGAGAGAATTGATCATGTGCCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 2 (lower is better)
Translates to: DIQSSSTARRKWRELIMCRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CAA 90 bp GGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATaGCTAGGATCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: GVERCTNGPATGMKL*LGSSAYILASKAWP
Trigger: GGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp CTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 2 (lower is better)
Translates to: LKSESVGHGFLLEDETQGTGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...GCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp GAATTGATCATGTGCCTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: ELIMCLKSESVGHGFLLEPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...CTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGATCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp GGCACTGGTCTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 2 (lower is better)
Translates to: GTGLIGPHHDNPPQQVLQGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...CTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR CCA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: FMAIITMRESPAFTLSPARPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp ATCTTCTCTCCTGCTGCAATTCTAAGCTGCCACTCCACCAAGTCAGTTCCTGTGCAGCAGCAGCCATTATaGATTTGGATGTGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: IFSPAAILSCHSTKSVPVQQQPL*IWMCCA
Trigger: TGCACAGCACATCCAAATCCATAATGGCTGCTGCTG...CACAGGAACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR CCA 90 bp GTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATTGCTAGGATCTTTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 2 (lower is better)
Translates to: VERCTNGPATGMKLLLGSFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...AGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CAA 90 bp TCAGTGTGCACGTTCCCAGCTTCAAACTCTGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTGGTGTGCAGTCCAACAATATTGTAC +
Preference number: 2 (lower is better)
Translates to: SVCTFPASNSGWPDR*SKKSMLVCSPTILY
Trigger: GTACAATATTGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACGTGCACACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp AGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 2 (lower is better)
Translates to: RVKVSVMAFSLRMRPRAALWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...GGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
3UTR-3UTR CCA 90 bp GTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATAAAGACTCTCAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 2 (lower is better)
Translates to: VMAFSLRMRPRAAWHKDSQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...AGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
3UTR-3UTR CCA 90 bp CGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGAGGAGTAGAGAGGTGCAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 2 (lower is better)
Translates to: RTPVSILVEGSARGVERCRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...GCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp TTTGTGGTGTTGAGGGATGAAATCAGTGTGCACGTTCCCAGCTTCAAACTCTGGCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 2 (lower is better)
Translates to: FVVLRDEISVHVPSFKLWPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...CCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp GATATTCAGTCTTCTTCCACTGCTAGACGAAAATGGAGAGAATTGATCATGTGCTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 2 (lower is better)
Translates to: DIQSSSTARRKWRELIMCFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKRPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR TCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 2 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFSSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp GGCACTGGTCTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 2 (lower is better)
Translates to: GTGLIGPHHDNPPQQVLQLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...CTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
3UTR-3UTR GCA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 2 (lower is better)
Translates to: CSIFMAIITMRESPAFTLETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp GATATTCAGTCTTCTTCCACTGCTAGACGAAAATGGAGAGAATTGATCATGTGCCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: DIQSSSTARRKWRELIMCPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAACTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 2 (lower is better)
Translates to: PEFLVSSQKISIWGLECQLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 2 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 2 (lower is better)
Translates to: PEKLEALPLFGGERRHYLGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCAGCCATTATGGATTTaGATGTGCTGTGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNQPLWI*MCCAAE
Trigger: CTCTGCTGCACAGCACATCCAAATCCATAATGGCTG...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR TCA 90 bp ATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCTTCATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 2 (lower is better)
Translates to: ILPPQTRLKECVCWPEHLHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...AAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497830.5
ENST00000629669.2
3UTR-3UTR TCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 2 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR TCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGCCAACAATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 2 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKPTILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGG...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCAGATTTGGATGTGCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 2 (lower is better)
Translates to: NQLRFTSNSINRTFQVSADLDVL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATC...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR GCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTACAAGTACACAGCATTaGCATGGTGATCACCAAACA +
Preference number: 2 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFTSTQH*HGDHQT
Trigger: TGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 2 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: PEKLEALPLFGGERRHYLKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp TTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 2 (lower is better)
Translates to: FTVPSFGDFMVCSIFMAIGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...GATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
3UTR-3UTR CCA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAACTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 2 (lower is better)
Translates to: PEFLVSSQKISIWGLECQLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CAA 90 bp TACTTAACTGGCCATTTCCTTGCTGGAGTTTATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: YLTGHFLAGVYSDSL*SDSSSSNSTKGVCL
Trigger: CAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCAGTTAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
3UTR-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 2 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp TCGATCAGCATAGCATCATCATTGAAAGACTTCTTAGCTTCTCTCCGTGCTGACCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: SISIASSLKDFLASLRADQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...GTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490284.5
ENST00000495767.5
3UTR-3UTR GCA 90 bp ATAGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAATCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: IVFSRIISFALLATPLTESKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...TTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CCA 90 bp AATGATCTTCTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: NDLLMSPLHTTVSFKQVHQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...GTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
3UTR-3UTR TCA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAACATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 2 (lower is better)
Translates to: PEFLVSSQKISIWGLECQHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497830.5
ENST00000629669.2
3UTR-3UTR TCA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGGAGTATGGAAATGGTTaGTTATCCGAGGAGACGAAA +
Preference number: 2 (lower is better)
Translates to: SRIISFALLATPLTEHFREYGNG*LSEETK
Trigger: TTTCGTCTCCTCGGATAATCAACCATTTCCATACTC...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
3UTR-3UTR CCA 90 bp CACTTTCTTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: HFLYCAILWRLYGMLHLHKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...ATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
3UTR-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 2 (lower is better)
Translates to: FSISIQSFSKTALYETPRGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 2 (lower is better)
Translates to: SRIISFALLATPLTEHFRVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495767.5
3UTR-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: FSISIQSFSKTALYETPRKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR-3UTR CCA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATTTATTGTAGTGGTCTaGAACCAAACCTGTAATAAC +
Preference number: 2 (lower is better)
Translates to: FGDFMVCSIFMAIITMREFIVVV*NQTCNN
Trigger: GTTATTACAGGTTTGGTTCCAGACCACTACAATAAA...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
3UTR-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAACTTCCTCTTTTTGGTaGAGAGAGAAGACACTACTT +
Preference number: 2 (lower is better)
Translates to: FSISIQSFSKTALYETPRTSSFW*REKTLL
Trigger: AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR GCA 72 bp GCTGTACCTCAGTTTTGTCAATGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTTCGCAATCATGGGGTC +
Preference number: 3 (lower is better)
Translates to: AVPQFCQCRLAI*CPHDQLRNHGV
Trigger: GACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp GGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATaGGGTCATAATGCACGGAAACTTCGTCTCCTTGCC +
Preference number: 3 (lower is better)
Translates to: GDLLPTRPASQS*GHNARKLRLLA
Trigger: GGCAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 72 bp GTACCTCAGTTTTGTCAATGCCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGCAATCATGGGGTCATA +
Preference number: 3 (lower is better)
Translates to: VPQFCQCRLAIC*PHDQLRNHGVI
Trigger: TATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp ATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCTGCAGCCTTCCGACTG +
Preference number: 3 (lower is better)
Translates to: MAFSLRMRPRAA*HKDSLAAAFRL
Trigger: CAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 72 bp ATCCTGGTGGAAGGGTCTGCTCGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACAGGCATGAAGTTATTG +
Preference number: 3 (lower is better)
Translates to: ILVEGSARGVER*TNGPATGMKLL
Trigger: CAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 72 bp ATTGTACTGACGAAGGCTGTACCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGCCCACACGACCAGCTT +
Preference number: 3 (lower is better)
Translates to: IVLTKAVPQFCQ*RLAICCPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp AACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATaGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: NPPQQVLQQQPL*IWMCCAAEVLA
Trigger: GGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp AACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGGCAGCCATTATGGATTaGGATGTGCTGTGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: NFVSLPYSSFNPGGRVCSAAIMD*DVLCSR
Trigger: TCTGCTGCACAGCACATCCAAATCCATAATGGCTGC...CGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
3UTR-3UTR CAA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 3 (lower is better)
Translates to: CSIFMAIITMRESPAFTLGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 72 bp GCAGCCTTCCGACTGAGCAACAACTGTTTGTGGTGTTaGGGGATGAAATCAGTGTGCACGTTCCCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: AAFRLSNNCLWC*GMKSVCTFPAS
Trigger: TGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp TCAGTTTTGTCAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAAACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 3 (lower is better)
Translates to: SVLSMPPGDLLPTRPASQTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...TTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 72 bp TTAATACCAGGCGCTGGGGCCTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTACAGTCTCTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: LIPGAGASSMIF*CRLCTLQSLSN
Trigger: GTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 72 bp CGTTCCCAGCTTCAAACTCTGGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGGTGTGCAGTCCAACAA +
Preference number: 3 (lower is better)
Translates to: RSQLQTLGGQTG*VRSQCWCAVQQ
Trigger: TTGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp ATCATGTGCCTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTG +
Preference number: 3 (lower is better)
Translates to: IMCLKSESVGHGFLLEDEGWPDR*SKKSML
Trigger: CAACATTGACTTCTTACTCAACCTGTCTGGCCACCC...CTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp GCTTCGAAGGCATGGCCCTGCAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCTCCTGCTGCAATTCTA +
Preference number: 3 (lower is better)
Translates to: ASKAWPCRVISS*LKGIFSPAAIL
Trigger: TAGAATTGCAGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp CGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGAGGAGTAGAGAGGTGCAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 3 (lower is better)
Translates to: RTPVSILVEGSARGVERCSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...GCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp TCCTGGATGGATAGCCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 3 (lower is better)
Translates to: SWMDSLCSRGLGHLNDFLRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...GAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
3UTR-3UTR CAA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 3 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
3UTR TCA 72 bp CAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTaGTCACCAAACACCTGGACTTCTACATGCCTCGGT +
Preference number: 3 (lower is better)
Translates to: QSLSNKYTALPW*SPNTWTSTCLG
Trigger: ACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp CTAGGATCTTCTGCATATATTCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCTTCCTGGCTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: LGSSAYILASKA*PCRVISSWLKG
Trigger: TCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 72 bp GCACACTACAGTCTCTTTCAAACAAGTACACAGCATTaGCATGGTGATCACCAAACACCTGGACTTCTACAT +
Preference number: 3 (lower is better)
Translates to: AHYSLFQTSTQH*HGDHQTPGLLH
Trigger: ATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR GCA 72 bp TCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGGCTCAAAGGAATCTTC +
Preference number: 3 (lower is better)
Translates to: SSAYILASKAWP*RVISSWLKGIF
Trigger: GAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp TTGATCATGTGCCTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 3 (lower is better)
Translates to: LIMCLKSESVGHGFLLEDSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...ATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp CGAGATATTCAGTCTTCTTCCACTGCTAGACGAAAATaGAGAGAATTGATCATGTGCCTGAAGAGTGAAAGT +
Preference number: 3 (lower is better)
Translates to: RDIQSSSTARRK*RELIMCLKSES
Trigger: ACTTTCACTCTTCAGGCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTaGGGACTGGAATGTCAATCTCAATACTTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: PEFLVSSQKISI*GLECQSQYFLP
Trigger: AGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
3UTR-3UTR CAA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAAACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 3 (lower is better)
Translates to: PEFLVSSQKISIWGLECQTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp TTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 3 (lower is better)
Translates to: FSRIISFALLATPLTEHFNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...GAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR-3UTR CAA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTAGTAAGAAGTCAATGTaGGTGTGCAGTCCAACAATA +
Preference number: 3 (lower is better)
Translates to: EFLVSSQKISIWGLECQSSKKSM*VCSPTI
Trigger: TATTGTTGGACTGCACACCAACATTGACTTCTTACT...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR CCA 72 bp GGATGTGCTCTTTATACCCATGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAATAATTCCTTCTTGCTT +
Preference number: 3 (lower is better)
Translates to: GCALYTHVSNCR*RRAYKNNSFLL
Trigger: AAGCAAGAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
3UTR-3UTR CAA 90 bp TTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCCGAAAATGGAGAGAATaGATCATGTGCCTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: FSRIISFALLATPLTEHFRKWRE*IMCLKS
Trigger: ACTCTTCAGGCACATGATCAATTCTCTCCATTTTCG...GAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
3UTR TCA 72 bp CAGAGTATGCCTAGATTACATGAGTATGGAAATGGTTaGTTATCCGAGGAGACGAAAACTGTTTTTACCATC +
Preference number: 3 (lower is better)
Translates to: QSMPRLHEYGNG*LSEETKTVFTI
Trigger: GATGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
3UTR GCA 72 bp GTGGTCTGGAACCAAACCTGTAATAACTCCAGAGTATaGCTAGATTACATGAGTATGGAAATGGTTGATTAT +
Preference number: 3 (lower is better)
Translates to: VVWNQTCNNSRV*LDYMSMEMVDY
Trigger: ATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGAGTTATTACAGGTTTGGTTCCAGACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GRERGRWNMLHLPSMGKMRLGRR*HRFLSA
Trigger: GGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCT...CATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR TCA 90 bp CCAGCAGCAGCCATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACAGCCCGGCCACTCCGTaGCTCCCCAGTACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAAAIMDLDVLCSRGLGHSPATP*LPSTEA
Trigger: TGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCT...GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAATGGCTGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR TCA 90 bp TGGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATAGCCCGGCCACTCCGTaGCTCCCCAGTACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WEGAGPMEYASSAFDGKDSPATP*LPSTEA
Trigger: TGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCT...ATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR GCA 90 bp CAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCCGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: QCRLAICCPHDQLRNHGVRGVER*TNGPAT
Trigger: TGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG...GACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CAATTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATAGCCCGGCCACTCCGTaGCTCCCCAGTACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QFSWRVPSGTGLIGPHHDSPATP*LPSTEA
Trigger: TGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCT...ATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCACAGCATTGCCATGGTaGTCACCAAACACCTGGACT +
Preference number: 4 (lower is better)
Translates to: QCRLAICCPHDQLRNHGVTALPW*SPNTWT
Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGT...GACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp TTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATAACAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FSWRVPSGTGLIGPHHDNRLGRR*HRFLSA
Trigger: GGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCT...GTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CGAGGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATTGCTAAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RGVERCTNGPATGMKLLLRLGRR*HRFLSA
Trigger: GGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCT...TAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACACTACGAAGCCTCGTaGCCCCCGCCGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLHYEAS*PPPATV
Trigger: GACGGTGGCCGGCGGGGGTCACGAGGCTTCGTAGTG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYRLGRR*HRFLSA
Trigger: GGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCT...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGTGGATGGATAGCCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRERGRWNMLHLPSMGKMWMDSL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCA...CATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR GCA 90 bp CTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LILPPQTRLKECVCWPEHRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...GTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGAAACTTCGTCTCCTTGTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: HDQLRNHGVIMHGNFVSLCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...CAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: PAAAIMDLDVLCSRGLGHFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAATGGCTGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR TCA 90 bp CTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTAGCCCGGCCACTCCGTaGCTCCCCAGTACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LTMITLHNRYSSSSHYGFSPATP*LPSTEA
Trigger: TGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCT...AAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGCCTGGTGGAAGGGTCTaGTCGAGGAGTAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NFVSLPYSSFNPGGRVCSPGGRV*SRSREV
Trigger: CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGG...CGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp ATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGAAACCCTGGTGGAAGGGTCTaGTCGAGGAGTAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ICCPHDQLRNHGVIMHGNPGGRV*SRSREV
Trigger: CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGG...GTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TGCTGGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAAAACCGCATCCTGGATaGATAGCCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CWEGAGPMEYASSAFDGKKPHPG*IACAAE
Trigger: CTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTT...TTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGGCGCGCTGAAGCGTaGATGTGCGGAAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLRRAEA*MCGSGE
Trigger: CTCCCCGCTTCCGCACATCCACGCTTCAGCGCGCCT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACACGGCGAGGGGAGCCTaGAGGATGGCGGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNTARGA*RMAGPV
Trigger: GACTGGGCCCGCCATCCTCCAGGCTCCCCTCGCCGT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR TCA 90 bp GGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: GDLLPTRPASQSWGHNARSSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...CCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp AGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCCTGCAGCCTTCCGACTaGGCAACAACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RVKVSVMAFSLRMRPRAALQPSD*ATTVCG
Trigger: ACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAG...GGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLRLGRR*HRFLSA
Trigger: GGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: VASAHYSLFQTSTQHCHGCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...ACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LILPPQTRLKECVCWPEHQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...GTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497830.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGATGCGGGGCCGATGGAATATaGTTCATCTGCCTTCGATGG +
Preference number: 4 (lower is better)
Translates to: GAGPMEYASSAFDGKDGCGADGI*FICLRW
Trigger: CCATCGAAGGCAGATGAAGCATATTCCATCGGCCCC...GCATCCATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CCA 90 bp TGGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGAGAAAACCGCATCCTaGATGGATAGCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WEGAGPMEYASSAFDGKDEKTAS*MDSLCS
Trigger: GCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTC...ATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CCA 90 bp AACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: NFVSLPYSSFNPGGRVCSRERGR*NMLHLP
Trigger: AGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...CGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp CAATTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATGAGAAAACCGCATCCTaGATGGATAGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QFSWRVPSGTGLIGPHHDEKTAS*MDSLGG
Trigger: GCCGCCGAGGCTATCCATCCAGGATGCGGTTTTCTC...ATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490284.5
3UTR CAA 72 bp AGGATGAGACCCAGGGCTGCCTGGCATAAAGACTCTTaGGCTGCAGCCTTCCGACTGAGCAACAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: RMRPRAAWHKDS*AAAFRLSNNCL
Trigger: CAAACAGTTGTTGCTCAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp ATTAACAGAACATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGCACTACGAAGCCTCGTaGCCCCCGCCGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: INRTFQVSAVSLAVKITKHYEAS*PPPATV
Trigger: GACGGTGGCCGGCGGGGGTCACGAGGCTTCGTAGTG...CTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAATGTTCTGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629669.2
CDS-3UTR GCA 90 bp TCAGTTTTGTCAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: SVLSMPPGDLLPTRPASQYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...TTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp GAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGATGCACTGTGCGCATCACCCTaGAGGCAATTTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ERGRWNMLHLPSMGKMDALCASP*RQFLLC
Trigger: ACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAG...TGCATCCATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LTMITLHNRYSSSSHYGFQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...AAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp ATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGAAACGAGAAAACCGCATCCTaGATGGATAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ICCPHDQLRNHGVIMHGNEKTAS*MDSLWL
Trigger: CAGCCACAGGCTATCCATCCAGGATGCGGTTTTCTC...GTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR TCA 90 bp CTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCACTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: LIGPHHDNPPQQVLQQQPLQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...TGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp GGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: GPHHDNPPQQVLQQQPLWLQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...CCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp TCTGCTCGAGGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTAACAGCATTGCCATGGTaGTCACCAAACACCTGGACT +
Preference number: 4 (lower is better)
Translates to: SARGVERCTNGPATGMKLTALPW*SPNTWT
Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGT...TAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp TCAGTTTTGTCAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAAAACTGTTTGTGGTGTTaGGGGATGAAATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SVLSMPPGDLLPTRPASQNCLWC*GMKSVC
Trigger: GCACACTGATTTCATCCCTCAACACCACAAACAGTT...TTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCGAGCAAGCAGTTGCTaGAGAGCCCCCTCAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLRASSC*RAPSSR
Trigger: CCTACTTGAGGGGGCTCTTCAGCAACTGCTTGCTCG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR GCA 90 bp TGGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATTACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: WEGAGPMEYASSAFDGKDYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...ATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR GCA 90 bp GGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: GDLLPTRPASQSWGHNARKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...CCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: KVSVMAFSLRMRPRAAWHAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...ATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCCTGGTGGAAGGGTCTaGTCGAGGAGTAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLPGGRV*SRSREV
Trigger: CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGCCGCCTGGCGATCTaGTGCCCACACGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNCRLAI*CPHDQL
Trigger: AAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTGGGGCCGATGGAATATaGTTCATCTGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWIGADGI*FICLWL
Trigger: CAGCCACAGGCAGATGAAGCATATTCCATCGGCCCC...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp GGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: GPHHDNPPQQVLQQQPLWDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...CCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: KVSVMAFSLRMRPRAAWHPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...ATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATCATGTGCCTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: IMCLKSESVGHGFLLEDEFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...CTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp GGCACTGGTCTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGGCTTCAAACTCTGGGTaGCCAGACAGGTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: GTGLIGPHHDNPPQQVLQASNSG*PDRLSK
Trigger: CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGC...CTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGAAACTTCGTCTCCTTGAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HDQLRNHGVIMHGNFVSLRPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...CAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCRERGR*NMLHLP
Trigger: AGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTAAACCGCATCCTGGATaGATAGCCTCGGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LTMITLHNRYSSSSHYGFKPHPG*IASAAG
Trigger: TCCTGCCGCCGAGGCTATCCATCCAGGATGCGGTTT...AAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490284.5
CDS-3UTR CCA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAGAGAAAACCGCATCCTaGATGGATAGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGEKTAS*MDSLWL
Trigger: CAGCCACAGGCTATCCATCCAGGATGCGGTTTTCTC...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
CDS-3UTR CCA 90 bp ATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCTTAAAGGGAAGGGCTGGTaGGGATGTCTTCCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: ILPPQTRLKECVCWPEHLKGKGW*GCLPPD
Trigger: GTCGGGAGGAAGACATCCCCACCAGCCCTTCCCTTT...AAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR TCA 90 bp GGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: GRERGRWNMLHLPSMGKMEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...CATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR TCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLLGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHLGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CAATTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: QFSWRVPSGTGLIGPHHDGGQTG*VRSQCW
Trigger: CCAACATTGACTTCTTACTCAACCTGTCTGGCCACC...ATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp TTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCCATAGAGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: LDVLCSRGLGHLNDFLHRAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR TCA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTCTAAGACCTCAGCCTTaGCTGCAGAGTCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FMAIITMRESPAFTLSPALRPQP*LQSLCP
Trigger: AGGGCACAGACTCTGCAGTCAAGGCTGAGGTCTTAG...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTGGATGGATAGCCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGWMDSL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCA...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRGVER*TNGPAT
Trigger: TGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACCTGGTGGAAGGGTCTaGTCGAGGAGTAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLPGGRV*SRSREV
Trigger: CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCCCTGGTGGAAGGGTCTaGTCGAGGAGTAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLAPGGRV*SRSREV
Trigger: CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGG...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FMAIITMRESPAFTLSPAPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: FCLILPPQTRLKECVCWPQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...AGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497830.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGATTTGGATGTGCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYDLDVL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATC...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp GAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGATGCACTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: ERGRWNMLHLPSMGKMDALLCTS*FFASTP
Trigger: GGGTGTGGAGGCAAAGAACCATGAAGTACACAACAG...TGCATCCATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGRERGR*NMLHLP
Trigger: TGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATAACGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: FSWRVPSGTGLIGPHHDNDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...GTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp GTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATTGCTAGGATCTCAGTTTCAATCCTGGTaGAAGGGTCTGCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: VERCTNGPATGMKLLLGSQFQSW*KGLLEE
Trigger: CTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG...AGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
3UTR CAA 72 bp CAACAATATTGTACTGACGAAGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGATCTGCTGCCCACACGA +
Preference number: 4 (lower is better)
Translates to: QQYCTDEGCTSV*SMPPGDLLPTR
Trigger: TCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp GGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGATGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGPMEYASSAFDGKDGCKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...GCATCCATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR TCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYLQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWILQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCACCAACAATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LIGPHHDNPPQQVLQQQPPTILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGG...TGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp GTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATAAAGACTCTAACTGTTTGTGGTGTTaGGGGATGAAATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: VMAFSLRMRPRAAWHKDSNCLWC*GMKSVC
Trigger: GCACACTGATTTCATCCCTCAACACCACAAACAGTT...AGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTGCAGCCTTCCGACTaGGCAACAACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLQPSD*ATTVCG
Trigger: ACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCTGCAGCCTTCCGACTaGGCAACAACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHLQPSD*ATTVCG
Trigger: ACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp AATGCACGGAAACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGCATGTGCCTGAAGAGTaGAAGTGTCGGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: NARKLRLLAVLQFQSWWKHVPEE*KCRSWL
Trigger: AAGCCATGACCGACACTTTCACTCTTCAGGCACATG...CTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp TGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: WRLYGMLHLHGDHNHEGIAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...GATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTACAGCTATGGCTACATTTTATTGTAGTGGTCTGGAACCAAACCTGTAATAACTTCCTCCCGACGCCGTaGCTGCCGGCAGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: LQLWLHFIVVVWNQTCNNFLPTP*LPAEPL
Trigger: GAGGGGTTCTGCCGGCAGTCACGGCGTCGGGAGGAA...GTTATTACAGGTTTGGTTCCAGACCACTACAATAAAATGTAGCCATAGCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTGTGCGCATCACCCTaGAGGCAATTTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLCASP*RQFLLC
Trigger: ACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLRGVER*TNGPAT
Trigger: TGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCCTGGTGGAAGGGTCTaGTCGAGGAGTAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNPGGRV*SRSREV
Trigger: CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAGGGATGAAATCAGTGTaGACGTTCCCAGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGGMKSV*TFPASN
Trigger: GTTTGAAGCTGGGAACGTGCACACTGATTTCATCCC...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp ATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: IMDLDVLCSRGLGHLNDFQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...AAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCAGGAATATGCTTCATCTaGCTGTGGCTGTTGTGTACT +
Preference number: 4 (lower is better)
Translates to: LIGPHHDNPPQQVLQQQPGICFI*LWLLCT
Trigger: AGTACACAACAGCCACAGGCAGATGAAGCATATTCC...TGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCGGGGCCGATGGAATATaGTTCATCTGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLAGADGI*FICLWL
Trigger: CAGCCACAGGCAGATGAAGCATATTCCATCGGCCCC...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR GCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCATCCCGACGCCGTGACTaGCGGCAGAACCCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSASRRRD*RQNPSE
Trigger: TTCGGAGGGGTTCTGCCGGCAGTCACGGCGTCGGGA...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAACCGCATCCTGGATaGATAGCCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLKPHPG*IACAAE
Trigger: CTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGAAACCGCATCCTGGATaGATAGCCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CSIFMAIITMRESPAFTLKPHPG*IACAAE
Trigger: CTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTT...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGAGAAAACCGCATCCTaGATGGATAGCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHEKTAS*MDSLCS
Trigger: GCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTGAGAAAACCGCATCCTaGATGGATAGCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLEKTAS*MDSLCS
Trigger: GCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTC...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCAGTTTCAATCCTGGTaGAAGGGTCTGCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLQFQSW*KGLLEE
Trigger: CTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTCAGTTTCAATCCTGGTaGAAGGGTCTGCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: VASAHYSLFQTSTQHCHGQFQSW*KGLLEE
Trigger: CTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG...ACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp ATGGATAGCCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCCATAGAAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: MDSLCSRGLGHLNDFLHRRERGR*NMLHLP
Trigger: AGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
3UTR CAA 72 bp ACGTTCCCAGCTTCAAACTCTGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTGGTGTGCAGTCCAACA +
Preference number: 4 (lower is better)
Translates to: TFPASNSGWPDR*SKKSMLVCSPT
Trigger: TGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAGCCCGGCCACTCCGTaGCTCCCCAGTACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRSPATP*LPSTEA
Trigger: TGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCAAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LIGPHHDNPPQQVLQQQPKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...TGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: FMAIITMRESPAFTLSPALQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: FTVPSFGDFMVCSIFMAILGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...GATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGGGQTG*VRSQCW
Trigger: CCAACATTGACTTCTTACTCAACCTGTCTGGCCACC...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTGTGGTGTTGAGGGATaGAATCAGTGTGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLCGVEG*NQCARS
Trigger: GGAACGTGCACACTGATTTCATCCCTCAACACCACA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp TTTGTGGTGTTGAGGGATGAAATCAGTGTGCACGTTCCCAGCTTCAAACTCTGGTGTGGTGTTGAGGGATaGAATCAGTGTGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: FVVLRDEISVHVPSFKLWCGVEG*NQCARS
Trigger: GGAACGTGCACACTGATTTCATCCCTCAACACCACA...CCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTGCAGCCTTCCGACTaGGCAACAACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWLQPSD*ATTVCG
Trigger: ACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp TTGATCATGTGCCTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATCTGCAGCCTTCCGACTaGGCAACAACTGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LIMCLKSESVGHGFLLEDLQPSD*ATTVCG
Trigger: ACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAG...ATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCATGTGCCTGAAGAGTaGAAGTGTCGGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLHVPEE*KCRSWL
Trigger: AAGCCATGACCGACACTTTCACTCTTCAGGCACATG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp CTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCACTTTGTCTCCAGCTTTaGCAAACACCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: LIGPHHDNPPQQVLQQQPLCLQL*QTPFQW
Trigger: CCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAG...TGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CCAGCAGCAGCCATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACCATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: PAAAIMDLDVLCSRGLGHHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAATGGCTGCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR TCA 90 bp TCCAGAGTATGCCTAGATTACATGAGTATGGAAATGGTTGATTATCCGAGGAGAAAGCCAAAGGCGCGCTaGAGCGTGGATGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SRVCLDYMSMEMVDYPRRKPKAR*SVDVRK
Trigger: CTTCCGCACATCCACGCTTCAGCGCGCCTTTGGCTT...TCTCCTCGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWIYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp ATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: IGPHHDNPPQQVLQQQPLYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...TAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GRERGRWNMLHLPSMGKMNFSSV*NEDLGN
Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...CATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGATGGATAGCCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNWMDSL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTTGGATGGATAGCCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTWMDSL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCA...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATAACAGGAATCTTCTCTCCTaGTGCAATTCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FSWRVPSGTGLIGPHHDNRNLLS*CNSKLP
Trigger: TGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCT...GTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNRGVER*TNGPAT
Trigger: TGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AATAACTCCAGAGTATGCCTAGATTACATGAGTATGGAAATGGTTGATTATCCGCGCCTGGCGATCTGCTaGCCACACGACCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: NNSRVCLDYMSMEMVDYPRLAIC*PHDQLR
Trigger: GCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCG...CGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGAGTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATAACGGAATATGCTTCATCTaGCTGTGGCTGTTGTGTACT +
Preference number: 4 (lower is better)
Translates to: FSWRVPSGTGLIGPHHDNGICFI*LWLLCT
Trigger: AGTACACAACAGCCACAGGCAGATGAAGCATATTCC...GTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGGGGCCGATGGAATATaGTTCATCTGCCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNGADGI*FICLWL
Trigger: CAGCCACAGGCAGATGAAGCATATTCCATCGGCCCC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492597.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGACCTCAGCCTTGACTaGAGAGTCTGTGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLDLSLD*RVCALE
Trigger: TTCAAGGGCACAGACTCTGCAGTCAAGGCTGAGGTC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCCTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCLLCTS*FFASTP
Trigger: GGGTGTGGAGGCAAAGAACCATGAAGTACACAACAG...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAAACCGCATCCTGGATaGATAGCCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWKPHPG*IACAAE
Trigger: CTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTAAACCGCATCCTGGATaGATAGCCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFKPHPG*IACAAE
Trigger: CTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTT...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LKSESVGHGFLLEDETQGQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...GCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: CSIFMAIITMRESPAFTLDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCTTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CGCCCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RPEFLVSSQKISIWGLECLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...ACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: FGDFMVCSIFMAIITMREFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGCTTCATCTGCCTGTaGCTGTTGTGTACTTCATGG +
Preference number: 4 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWICFICL*LLCTSW
Trigger: CCATGAAGTACACAACAGCCACAGGCAGATGAAGCA...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTCAGCCATTATGGATTTaGATGTGCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWIQPLWI*MCCAAE
Trigger: CTCTGCTGCACAGCACATCCAAATCCATAATGGCTG...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATTGGATGGATAGCCTGTaGCTGTTGTGTACTTCATGG +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYWMDSL*LLCTSW
Trigger: CCATGAAGTACACAACAGCCACAGGCTATCCATCCA...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
CDS-3UTR CCA 90 bp CACTCCACCAAGTCAGTTCCTGTGATCATCTCAGTAACAGGATGTTCCACTTGCAAACCGCATCCTGGATaGATAGCCTGTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HSTKSVPVIISVTGCSTCKPHPG*IACGCC
Trigger: ACAACAGCCACAGGCTATCCATCCAGGATGCGGTTT...GCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGACTTGGTGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR CCA 90 bp TACATGAGTATGGAAATGGTTGATTATCCGAGGAGACGAAAACTGTTTTTACCAGGGGAGCCTGGAGGATaGCGGGCCCAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: YMSMEMVDYPRRRKLFLPGEPGG*RAQSSE
Trigger: TTCTGAGGACTGGGCCCGCCATCCTCCAGGCTCCCC...TGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGCAGCCATTATGGATTaGATGTGCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHAAIMD*MCCAAE
Trigger: CTCTGCTGCACAGCACATCCAATCCATAATGGCTGC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610757.4
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLLQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGACAGCATTGCCATGGTaGTCACCAAACACCTGGACT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWTALPW*SPNTWT
Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHSSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLSSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp GTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: VCSIFMAIITMRESPAFTSSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAACTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PEFLVSSQKISIWGLECQLGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWGGQTG*VRSQCW
Trigger: CCAACATTGACTTCTTACTCAACCTGTCTGGCCACC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTGTGGTGTTGAGGGATaGAATCAGTGTGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWCGVEG*NQCARS
Trigger: GGAACGTGCACACTGATTTCATCCCTCAACACCACA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACATGTGCCTGAAGAGTaGAAGTGTCGGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLHVPEE*KCRSWL
Trigger: AAGCCATGACCGACACTTTCACTCTTCAGGCACATG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp GATATTCAGTCTTCTTCCACTGCTAGACGAAAATGGAGAGAATTGATCATGTGCGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: DIQSSSTARRKWRELIMCAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGCCACCGTCGGAGCCTaGGCCTACCTTTGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRATVGA*AYLWAD
Trigger: ATCAGCCCAAAGGTAGGCTCAGGCTCCGACGGTGGC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp ATTTGGGGACTGGAATGTCAATCTCAATACTTCCTTCCTTGGAAAATAGGTAAAGCCACCGTCGGAGCCTaGGCCTACCTTTGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IWGLECQSQYFLPWKIGKATVGA*AYLWAD
Trigger: ATCAGCCCAAAGGTAGGCTCAGGCTCCGACGGTGGC...TTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCTGTGCGCATCACCCTaGAGGCAATTTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNLCASP*RQFLLC
Trigger: ACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATGGATGGATAGCCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FGDFMVCSIFMAIITMREWMDSL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCA...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AATGCACGGAAACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGAATCTTCTCTCCTGCTaGAATTCTAAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: NARKLRLLAVLQFQSWWKNLLSC*NSKLPL
Trigger: GAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATT...CTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGGGATGAAATCAGTGTaGACGTTCCCAGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGGMKSV*TFPASN
Trigger: GTTTGAAGCTGGGAACGTGCACACTGATTTCATCCC...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp TCTGCTCGAGGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTAAGAGAATTGATCATGTaGCTGAAGAGTGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SARGVERCTNGPATGMKLRELIM*LKSESV
Trigger: GACACTTTCACTCTTCAGGCACATGATCAATTCTCT...TAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATGCTGAAGCGTGGATGTaGGGAAGCGGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VFSRIISFALLATPLTEHAEAWM*GSGEKG
Trigger: CCCTTTCTCCCCGCTTCCGCACATCCACGCTTCAGC...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHLLCTS*FFASTP
Trigger: GGGTGTGGAGGCAAAGAACCATGAAGTACACAACAG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGAGAAAACCGCATCCTaGATGGATAGCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNEKTAS*MDSLCS
Trigger: GCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GGCACTGGTCTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: GTGLIGPHHDNPPQQVLQQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...CTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR CCA 90 bp CTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCACAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: LIGPHHDNPPQQVLQQQPQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...TGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR CCA 90 bp CAATTCTCCTGGCGTGTTCCTTCAGGCACTGGTCTGATTGGTCCTCACCATGATCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QFSWRVPSGTGLIGPHHDQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...ATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCCCAGCTTCAAACTCTGGGTGGCCAGACAGGTTGAGTAAGAAGTCAATGTTGCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: FPASNSGWPDRLSKKSMLLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...CAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: VCSIFMAIITMRESPAFTLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCAGTTTCAATCCTGGTaGAAGGGTCTGCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTQFQSW*KGLLEE
Trigger: CTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGCTTCAAACTCTGGGTaGCCAGACAGGTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLASNSG*PDRLSK
Trigger: CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNRPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp AACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGACTTCCTCTTTTTGGTaGAGAGAGAAGACACTACTT +
Preference number: 4 (lower is better)
Translates to: NFVSLPYSSFNPGGRVCSTSSFW*REKTLL
Trigger: AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGT...CGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp ATCATGTGCCTGAAGAGTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGCAGCAGCAGCCATTATaGATTTGGATGTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IMCLKSESVGHGFLLEDEQQQPL*IWMCCA
Trigger: TGCACAGCACATCCAAATCCATAATGGCTGCTGCTG...CTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp GGGTGGCCAGACAGGTTGAGTAAGAAGTCAATGTTGGTGTGCAGTCCAACAATATGGATGGATAGCCTGTaGCTGTTGTGTACTTCATGG +
Preference number: 4 (lower is better)
Translates to: GWPDRLSKKSMLVCSPTIWMDSL*LLCTSW
Trigger: CCATGAAGTACACAACAGCCACAGGCTATCCATCCA...TATTGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACAGCAGCAGCCATTATaGATTGGATGTGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLQQQPL*IGCAVQ
Trigger: CTGCACAGCACATCCAATCCATAATGGCTGCTGCTG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610757.4
CDS-3UTR TCA 90 bp ATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTAGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: IGPHHDNPPQQVLQQQPLEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...TAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR TCA 90 bp CTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: LILPPQTRLKECVCWPEHEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...GTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR TCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCTTCAGGCACTGGTCTaGTTGGTCCTCACCATGATA +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTLQALV*LVLTMI
Trigger: TATCATGGTGAGGACCAATCAGACCAGTGCCTGAAG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLSSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGCTGGGGCCTCCTCAATaGTCTTCTGATGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SRIISFALLATPLTEHFRLGPPQ*SSDVAS
Trigger: AGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCCAACAATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHPTILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTGGQTG*VRSQCW
Trigger: CCAACATTGACTTCTTACTCAACCTGTCTGGCCACC...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp AAACAAGTACACAGCATTGCCATGGTGATCACCAAACACCTGGACTTCTACATGGGTGGCCAGACAGGTTaGGTAAGAAGTCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: KQVHSIAMVITKHLDFYMGGQTG*VRSQCW
Trigger: CCAACATTGACTTCTTACTCAACCTGTCTGGCCACC...CATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGCATGTGCCTGAAGAGTaGAAGTGTCGGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKHVPEE*KCRSWL
Trigger: AAGCCATGACCGACACTTTCACTCTTCAGGCACATG...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCATGTGCCTGAAGAGTaGAAGTGTCGGTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNHVPEE*KCRSWL
Trigger: AAGCCATGACCGACACTTTCACTCTTCAGGCACATG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACAGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCGATTCCCTTTTGTCTaGTTCTTCCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGRFPFV*FFLLKL
Trigger: GAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCGATTCCCTTTTGTCTaGTTCTTCCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRFPFV*FFLLKL
Trigger: GAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTGGGGCCGATGGAATATaGTTCATCTGCCATATCTAC +
Preference number: 4 (lower is better)
Translates to: SIFMAIITMRESPAFTLSGADGI*FICHIY
Trigger: GTAGATATGGCAGATGAAGCATATTCCATCGGCCCC...AGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGGGGCCGATGGAATATaGTTCATCTGCCATATCTAC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLGADGI*FICHIY
Trigger: GTAGATATGGCAGATGAAGCATATTCCATCGGCCCC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: FMAIITMRESPAFTLSPATGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp ATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCTTACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ILPPQTRLKECVCWPEHLTGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...AAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAATCTTCTCTCCTGCTaGAATTCTAAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGNLLSC*NSKLPL
Trigger: GAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAGGAATCTTCTCTCCTaGTGCAATTCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRNLLS*CNSKLP
Trigger: TGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGAGGAATCTTCTCTCCTaGTGCAATTCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CSIFMAIITMRESPAFTLRNLLS*CNSKLP
Trigger: TGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCT...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GTGCTCTTTATACCCATGTCTCTAATTGCAGATGGAGGAGGGCCTATAAAAATACGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: VLFIPMSLIADGGGPIKIRGVER*TNGPAT
Trigger: TGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG...TATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGAAGTCAATGTTGGTGTaGAGTCCAACAATATTGTAC +
Preference number: 4 (lower is better)
Translates to: NFVSLPYSSFNPGGRVCSKSMLV*SPTILY
Trigger: GTACAATATTGTTGGACTGCACACCAACATTGACTT...CGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp ATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCATAATGCACGGAAACACACTTTCTTTACTGTaGCATCCTTTGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: ICCPHDQLRNHGVIMHGNTLSLL*HPLETL
Trigger: TAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGT...GTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR GCA 90 bp ATTTGGGGACTGGAATGTCAATCTCAATACTTCCTTCCTTGGAAAATAGGTAAACAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: IWGLECQSQYFLPWKIGKQYRGS*VPHAKP
Trigger: GGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTG...TTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000629669.2
CDS-3UTR GCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTTACTTCATGGTTCTTTaGCTCCACACCCATGTCCCA +
Preference number: 4 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFYFMVL*LHTHVP
Trigger: TGGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp TTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCCATAGACTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: LDVLCSRGLGHLNDFLHRLLCTS*FFASTP
Trigger: GGGTGTGGAGGCAAAGAACCATGAAGTACACAACAG...TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLLLCTS*FFASTP
Trigger: GGGTGTGGAGGCAAAGAACCATGAAGTACACAACAG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR CCA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWIQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CTAGGATCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCCTGCAGAGTTATTGCTTCAAACTCTGGGTaGCCAGACAGGTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LGSSAYILASKAWPCRVIASNSG*PDRLSK
Trigger: CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGC...AATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGCTTCAAACTCTGGGTaGCCAGACAGGTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNASNSG*PDRLSK
Trigger: CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp CGAGGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATTGCTAACTGCTAGACGAAAATaGAGAGAATTGATCATGTGC +
Preference number: 4 (lower is better)
Translates to: RGVERCTNGPATGMKLLLTARRK*RELIMC
Trigger: GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGT...TAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATTGGCCATTTCCTTGCTaGAGTTTATTCCGATTCCCT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHWPFPC*SLFRFP
Trigger: AGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCA...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTTGGCCATTTCCTTGCTaGAGTTTATTCCGATTCCCT +
Preference number: 4 (lower is better)
Translates to: VASAHYSLFQTSTQHCHGWPFPC*SLFRFP
Trigger: AGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCA...ACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp ATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTAAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: IGPHHDNPPQQVLQQQPLKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...TAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCTTGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: ILPPQTRLKECVCWPEHLGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...AAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCCCAGCTTCAAACTCTGGGTGGCCAGACAGGTTGAGTAAGAAGTCAATGTTGAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: FPASNSGWPDRLSKKSMLKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...CAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCAACAATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWPTILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACCAACAATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLPTILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp ATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTTGTGGTGTTGAGGGATaGAATCAGTGTGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: IMDLDVLCSRGLGHLNDFCGVEG*NQCARS
Trigger: GGAACGTGCACACTGATTTCATCCCTCAACACCACA...AAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAACTGTTTGTGGTGTTaGGGGATGAAATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWNCLWC*GMKSVC
Trigger: GCACACTGATTTCATCCCTCAACACCACAAACAGTT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGCTAAGGGGCCGCCCTaGGTTTCTTGTGAGCTCACA +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRAKGPP*VSCELT
Trigger: TGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCTTTGTCTCCAGCTTTaGCAAACACCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLLCLQL*QTPFQW
Trigger: CCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCTTTGTCTCCAGCTTTaGCAAACACCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHLCLQL*QTPFQW
Trigger: CCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACGATTCCCTTTTGTCTaGTTCTTCCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLRFPFV*FFLLKL
Trigger: GAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCCGATTCCCTTTTGTCTaGTTCTTCCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLARFPFV*FFLLKL
Trigger: GAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCG...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGGTGGGTGGATCATCTaGGGTCAGGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRGGWII*GQELET
Trigger: GGTCTCCAACTCCTGACCTCAGATGATCCACCCACC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR GCA 90 bp AAACAAGTACACAGCATTGCCATGGTGATCACCAAACACCTGGACTTCTACATGTACTTCATGGTTCTTTaGCTCCACACCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KQVHSIAMVITKHLDFYMYFMVL*LHTHVL
Trigger: GAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTA...CATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: VASAHYSLFQTSTQHCHGKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...ACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLTGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLATGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWTGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CGCCCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTAATCTTCTCTCCTGCTaGAATTCTAAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: RPEFLVSSQKISIWGLECNLLSC*NSKLPL
Trigger: GAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATT...ACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAGGAATCTTCTCTCCTaGTGCAATTCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLRNLLS*CNSKLP
Trigger: TGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTAGGAATCTTCTCTCCTaGTGCAATTCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFRNLLS*CNSKLP
Trigger: TGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCT...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGGGATGAAATCAGTGTaGACGTTCCCAGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNGMKSV*TFPASN
Trigger: GTTTGAAGCTGGGAACGTGCACACTGATTTCATCCC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp GGATCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCCTGCAGAGTTATTTCTGGGATGAAATCAGTGTaGACGTTCCCAGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GSSAYILASKAWPCRVISGMKSV*TFPASN
Trigger: GTTTGAAGCTGGGAACGTGCACACTGATTTCATCCC...AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACATTTCAGGTAAGTaGAGTCTCCCTCGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLNISGK*SLPRCK
Trigger: TTTACAGCGAGGGAGACTGCACTTACCTGAAATGTT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GGGTGGCCAGACAGGTTGAGTAAGAAGTCAATGTTGGTGTGCAGTCCAACAATAAACATTTCAGGTAAGTaGAGTCTCCCTCGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GWPDRLSKKSMLVCSPTINISGK*SLPRCK
Trigger: TTTACAGCGAGGGAGACTGCACTTACCTGAAATGTT...TATTGTTGGACTGCACACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAACATTTCAGGTAAGTaGAGTCTCCCTCGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGNISGK*SLPRCK
Trigger: TTTACAGCGAGGGAGACTGCACTTACCTGAAATGTT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCACTGCCAGAGTTATTaGCACCAAAGCTTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTHCQSY*HQSLEL
Trigger: GAGCTCTAAGCTTTGGTGGCAATAACTCTGGCAGTG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAATTATGGATTGGATGTaGTGTGCAGCAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLIMDWM*CAAEVL
Trigger: CAAGACCTCTGCTGCACAGCACATCCAATCCATAAT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610757.4
CDS-3UTR CCA 90 bp ATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTAGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: IGPHHDNPPQQVLQQQPLVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...TAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTTTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp ATTAACAGAACATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGCAGTTTCAATCCTGGTaGAAGGGTCTGCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: INRTFQVSAVSLAVKITKQFQSW*KGLLEE
Trigger: CTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG...CTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAATGTTCTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTCTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGCTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SRIISFALLATPLTEHFRLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGCCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCTTTGTCAATGCCGCCTaGCGATCTGCTGCCCACACG +
Preference number: 4 (lower is better)
Translates to: FSRIISFALLATPLTEHFFVNAA*RSAAHT
Trigger: CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAA...GAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTACTGTGCCATCCTTTaGAGACTTTATGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLYCAIL*RLYGML
Trigger: GAGCATACCATAAAGTCTCCAAAGGATGGCACAGTA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGCTTCATCTGCCTGTaGCTGTTGTGTACTTCATGG +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNCFICL*LLCTSW
Trigger: CCATGAAGTACACAACAGCCACAGGCAGATGAAGCA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492597.5
ENST00000497830.5
CDS-3UTR CCA 90 bp TTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCTGCTTCATCTGCCTGTaGCTGTTGTGTACTTCATGG +
Preference number: 4 (lower is better)
Translates to: FTVPSFGDFMVCSIFMAICFICL*LLCTSW
Trigger: CCATGAAGTACACAACAGCCACAGGCAGATGAAGCA...GATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTAAAATTAGCTGGGCATaGTGTTGGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTKISWA*CWAPVI
Trigger: GATTACAGGCGCCCAACACCATGCCCAGCTAATTTT...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR CCA 90 bp ATGGATAGCCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCCATAGATTCATCTGCCTTCGATaGGAAAGATGGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: MDSLCSRGLGHLNDFLHRFICLR*ERWMQT
Trigger: TGTCTGCATCCATCTTTCCCATCGAAGGCAGATGAA...TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CCA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTAATTTCCCAGCTCTGTaGAAGGTACATTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FMAIITMRESPAFTLSPANFPAL*KVHLLF
Trigger: GAAGAGCAAATGTACCTTCCACAGAGCTGGGAAATT...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
3UTR CAA 72 bp AGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATaGCTAGGATCTTCTGCATATATTCTAGCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: RCTNGPATGMKL*LGSSAYILASK
Trigger: CTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SIFMAIITMRESPAFTLSKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...AGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp GGATCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCCTGCAGAGTTATTTCTCGATTCCCTTTTGTCTaGTTCTTCCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: GSSAYILASKAWPCRVISRFPFV*FFLLKL
Trigger: GAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCG...AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR TCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCGAGTATGGAAATGGTTaGTTATCCGAGGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLAEYGNG*LSEETK
Trigger: TTTCGTCTCCTCGGATAATCAACCATTTCCATACTC...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR TCA 90 bp TTACAGCTATGGCTACATTTTATTGTAGTGGTCTGGAACCAAACCTGTAATAACTCTGAACTGGACACCTaGTGGGGCACAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: LQLWLHFIVVVWNQTCNNSELDT*WGTAEL
Trigger: CAGTTCAGCTGTGCCCCATCAGGTGTCCAGTTCAGA...GTTATTACAGGTTTGGTTCCAGACCACTACAATAAAATGTAGCCATAGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR TCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGAATTGATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWELILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATCAATTC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCACTGTGCGCATCACCCTaGAGGCAATTTCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSALCASP*RQFLLC
Trigger: ACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAG...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNTGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp ATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: IMDLDVLCSRGLGHLNDFAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...AAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAATCTTCTCTCCTGCTaGAATTCTAAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNNLLSC*NSKLPL
Trigger: GAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCAATCTTCTCTCCTGCTaGAATTCTAAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: FTVPSFGDFMVCSIFMAINLLSC*NSKLPL
Trigger: GAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATT...GATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp ATTAACAGAACATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGTCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: INRTFQVSAVSLAVKITKSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...CTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAATGTTCTGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACGAGGAGTAGAGAGGTaGACTAATGGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRRGVER*TNGPAT
Trigger: TGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRPQFCQ*RLAICC
Trigger: GCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAGAGAATTGATCATGTaGCTGAAGAGTGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGRELIM*LKSESV
Trigger: GACACTTTCACTCTTCAGGCACATGATCAATTCTCT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAACATTTCAGGTAAGTaGAGTCTCCCTCGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLNISGK*SLPRCK
Trigger: TTTACAGCGAGGGAGACTGCACTTACCTGAAATGTT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGGAATATGCTTCATCTaGCTGTGGCTGTTGTGTACT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNGICFI*LWLLCT
Trigger: AGTACACAACAGCCACAGGCAGATGAAGCATATTCC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492597.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACAGATTTGGATGTGCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTDLDVL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGCACATCCAAATC...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGGATTGGATGTGCTGTaGAGCAGAGGTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRGLDVL*SRGLGH
Trigger: GTGGCCAAGACCTCTGCTGCACAGCACATCCAATCC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610757.4
CDS-3UTR CCA 90 bp TACATGAGTATGGAAATGGTTGATTATCCGAGGAGACGAAAACTGTTTTTACCAAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: YMSMEMVDYPRRRKLFLPRERGR*NMLHLP
Trigger: TGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...TGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp ATAGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAAAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: IVFSRIISFALLATPLTERERGR*NMLHLP
Trigger: TGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...TTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCAGAGAAAACCGCATCCTaGATGGATAGCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSAEKTAS*MDSLCS
Trigger: GCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTC...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTTGTGGTGTTGAGGGATGAAATCAGTGTGCACGTTCCCAGCTTCAAACTCTGGGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: FVVLRDEISVHVPSFKLWVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...CCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR CCA 90 bp GTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: VCSIFMAIITMRESPAFTVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTGATAGCCAATTCTCCTaGCGTGTTCCTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSDSQFS*RVPSGT
Trigger: AGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATC...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCACAGTTTCAATCCTGGTaGAAGGGTCTGCTCGAGGAG +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSAQFQSW*KGLLEE
Trigger: CTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACACTCCAGTTTCAATCCTaGTGGAAGGGTCTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTLQFQS*WKGLLE
Trigger: CTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VFSRIISFALLATPLTEHRPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCACTGCTAGACGAAAATaGAGAGAATTGATCATGTGC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGTARRK*RELIMC
Trigger: GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACTGCTAGACGAAAATaGAGAGAATTGATCATGTGC +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLTARRK*RELIMC
Trigger: GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTACTGTGCCATCCTTTaGAGACTTTATGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWYCAIL*RLYGML
Trigger: GAGCATACCATAAAGTCTCCAAAGGATGGCACAGTA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCACTTCCTCTTTTTGGTaGAGAGAGAAGACACTACTT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGTSSFW*REKTLL
Trigger: AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATACTTCCTCTTTTTGGTaGAGAGAGAAGACACTACTT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHTSSFW*REKTLL
Trigger: AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TCGATCAGCATAGCATCATCATTGAAAGACTTCTTAGCTTCTCTCCGTGCTGACGGCACTTCCTCTTTTTaGTGGAGAGAGAAGACACTA +
Preference number: 4 (lower is better)
Translates to: SISIASSLKDFLASLRADGTSSF*WREKTL
Trigger: TAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCC...GTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAGGGAGCGGGGCCGATaGAATATGCTTCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRRERGR*NMLHLP
Trigger: AGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492597.5
ENST00000497830.5
CDS-3UTR CCA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAACAGCCATTATGGATTTaGATGTGCTGTGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PEFLVSSQKISIWGLECQQPLWI*MCCAAE
Trigger: CTCTGCTGCACAGCACATCCAAATCCATAATGGCTG...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp ATTATGGATTTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCAGCAGCAGCCATTATaGATTTGGATGTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IMDLDVLCSRGLGHLNDFQQQPL*IWMCCA
Trigger: TGCACAGCACATCCAAATCCATAATGGCTGCTGCTG...AAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAAATCCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAATACAAAAATTAGCTaGGCATGGTGTTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNNTKIS*AWCWAP
Trigger: AGGCGCCCAACACCATGCCCAGCTAATTTTTGTATT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGATTCTTGCCATTTTaGGTGTGTGTTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTGFLPF*VCVVSS
Trigger: GGAAGAGACAACACACACCCAAAATGGCAAGAATCC...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR TCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp TGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: WRLYGMLHLHGDHNHEGIEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...GATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACAACAGCATTGCCATGGTaGTCACCAAACACCTGGACT +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTTALPW*SPNTWT
Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGT...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCTTTGTCTCCAGCTTTaGCAAACACCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNLCLQL*QTPFQW
Trigger: CCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp ATAGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAAGGGGCACAGCTGAACTaGAAAATGGCTTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IVFSRIISFALLATPLTEGAQLN*KMALRA
Trigger: TGCCCTCAAAGCCATTTTTCAGTTCAGCTGTGCCCC...TTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGNFSSV*NEDLGN
Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHNFSSV*NEDLGN
Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: CSIFMAIITMRESPAFTLNFSSV*NEDLGN
Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTGGGGCCGATGGAATATaGTTCATCTGCCATATCTAC +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSGADGI*FICHIY
Trigger: GTAGATATGGCAGATGAAGCATATTCCATCGGCCCC...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: LTMITLHNRYSSSSHYGFLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...AAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
CDS-3UTR GCA 90 bp CACTCCACCAAGTCAGTTCCTGTGATCATCTCAGTAACAGGATGTTCCACTTGCTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: HSTKSVPVIISVTGCSTCLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...GCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGACTTGGTGGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR GCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTACAAGTACACAGCATTaGCATGGTGATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTTSTQH*HGDHQT
Trigger: TGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACACAAGTACACAGCATTaGCATGGTGATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNTSTQH*HGDHQT
Trigger: TGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGACAAGTACACAGCATTaGCATGGTGATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKTSTQH*HGDHQT
Trigger: TGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TACATGCCTCGGTGTGTCTACAAACTTCTCGATCAGCATAGCATCATCATTGAAAGGAATCTTCTCTCCTaGTGCAATTCTAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: YMPRCVYKLLDQHSIIIERNLLS*CNSKLP
Trigger: TGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCT...TTCAATGATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TACATGCCTCGGTGTGTCTACAAACTTCTCGATCAGCATAGCATCATCATTGAAGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 4 (lower is better)
Translates to: YMPRCVYKLLDQHSIIIEETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...TTCAATGATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAGTCAATGTTGGTGTaGAGTCCAACAATATTGTAC +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLKSMLV*SPTILY
Trigger: GTACAATATTGTTGGACTGCACACCAACATTGACTT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp GTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTAAGTCAATGTTGGTGTaGAGTCCAACAATATTGTAC +
Preference number: 4 (lower is better)
Translates to: VCSIFMAIITMRESPAFTKSMLV*SPTILY
Trigger: GTACAATATTGTTGGACTGCACACCAACATTGACTT...AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAGAGAATTGATCATGTaGCTGAAGAGTGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWRELIM*LKSESV
Trigger: GACACTTTCACTCTTCAGGCACATGATCAATTCTCT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTATCTTCAATCTGCATaGTATAAGACCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLYLQSA*YKTHHG
Trigger: ACCATGATGGGTCTTATAGCATGCAGATTGAAGATA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATTATCTTCAATCTGCATaGTATAAGACCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHYLQSA*YKTHHG
Trigger: ACCATGATGGGTCTTATAGCATGCAGATTGAAGATA...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACAACATTTCAGGTAAGTaGAGTCTCCCTCGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNNISGK*SLPRCK
Trigger: TTTACAGCGAGGGAGACTGCACTTACCTGAAATGTT...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAACATTTCAGGTAAGTaGAGTCTCCCTCGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNNISGK*SLPRCK
Trigger: TTTACAGCGAGGGAGACTGCACTTACCTGAAATGTT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATACACTTTCTTTACTGTaGCATCCTTTGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHTLSLL*HPLETL
Trigger: TAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACACTTTCTTTACTGTaGCATCCTTTGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLTLSLL*HPLETL
Trigger: TAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GATATTCAGTCTTCTTCCACTGCTAGACGAAAATGGAGAGAATTGATCATGTGCTTTAATACCAGGCGCTaGGGCCTCCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: DIQSSSTARRKWRELIMCFNTRR*GLLNDL
Trigger: AAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAA...GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTCTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAGACCCAGGGCTGCCTaGCATAAAGACTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRRPRAA*HKDSLA
Trigger: AGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGCTAGACGAAAATaGAGAGAATTGATCATGTGC +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLTARRK*RELIMC
Trigger: GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: CSIFMAIITMRESPAFTLQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: LEALPLFGGERRHYLTGHQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: KLEALPLFGGERRHYLTGQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTACTGTGCCATCCTTTaGAGACTTTATGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNYCAIL*RLYGML
Trigger: GAGCATACCATAAAGTCTCCAAAGGATGGCACAGTA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTTACTGTGCCATCCTTTaGAGACTTTATGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: FCLILPPQTRLKECVCWPYCAIL*RLYGML
Trigger: GAGCATACCATAAAGTCTCCAAAGGATGGCACAGTA...AGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACAAGACACTACTTAACTaGCCATTTCCTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNKTLLN*PFPCWS
Trigger: ACTCCAGCAAGGAAATGGCCAGTTAAGTAGTGTCTT...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCACTTCCTCTTTTTGGTaGAGAGAGAAGACACTACTT +
Preference number: 4 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLATSSFW*REKTLL
Trigger: AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGT...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TATACCCATGTCTCTAATTGCAGATGGAGGAGGGCCTATAAAAATAATTCCTTCAAACCGCATCCTGGATaGATAGCCTGTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YTHVSNCRWRRAYKNNSFKPHPG*IACGCC
Trigger: ACAACAGCCACAGGCTATCCATCCAGGATGCGGTTT...GAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
CDS-3UTR CCA 90 bp ATGGATAGCCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCCATAGAAGTCAGCAGATTCTGTaGCAGGAACCTCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: MDSLCSRGLGHLNDFLHRSQQIL*QEPQFY
Trigger: ATAAAATTGAGGTTCCTGCCACAGAATCTGCTGACT...TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAACAGCATTGCCATGGTaGTCACCAAACACCTGGACT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRTALPW*SPNTWT
Trigger: AGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCATCCTCAATGATCTTCTaGTGTCGCCTCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSASSMIF*CRLCTL
Trigger: TAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGA...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAATTTCTCCTCTGTTTaGAATGAGGACCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWNFSSV*NEDLGN
Trigger: ATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CGCCCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTTTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: RPEFLVSSQKISIWGLECLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...ACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AATGATCTTCTGATGTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACACAAGTACACAGCATTaGCATGGTGATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: NDLLMSPLHTTVSFKQVHTSTQH*HGDHQT
Trigger: TGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT...GTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR GCA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATGCTGCAATTCTAAGCTaGCACTCCACCAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: VFSRIISFALLATPLTEHAAILS*HSTKSV
Trigger: AACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AATAACTCCAGAGTATGCCTAGATTACATGAGTATGGAAATGGTTGATTATCCGTCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NNSRVCLDYMSMEMVDYPSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...CGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGAGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp ATTTGGGGACTGGAATGTCAATCTCAATACTTCCTTCCTTGGAAAATAGGTAAATCGAAGGCATGGCCCTaGAGAGTTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IWGLECQSQYFLPWKIGKSKAWP*RVISSW
Trigger: CCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGA...TTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GTGCTCTTTATACCCATGTCTCTAATTGCAGATGGAGGAGGGCCTATAAAAATAGAAACTTCGTCTCCTTaGCGTACTCCAGTTTCAATC +
Preference number: 4 (lower is better)
Translates to: VLFIPMSLIADGGGPIKIETSSP*RTPVSI
Trigger: GATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTC...TATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR GCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACAGAGAATTGATCATGTaGCTGAAGAGTGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNRELIM*LKSESV
Trigger: GACACTTTCACTCTTCAGGCACATGATCAATTCTCT...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR GCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACACTTTCTTTACTGTaGCATCCTTTGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLTLSLL*HPLETL
Trigger: TAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACGTCTCTAATTGCAGATaGAGGAGGGCCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNVSNCR*RRAYKN
Trigger: ATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGAC...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTCAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCACCAGCTTCGCAATCATaGGGTCATAATGCACGGAAA +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSAPASQS*GHNARK
Trigger: TTTCCGTGCATTATGACCCCATGATTGCGAAGCTGG...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGTAAGAAGTCAATGTTaGTGTGCAGTCCAACAATAT +
Preference number: 4 (lower is better)
Translates to: PEKLEALPLFGGERRHYLVRSQC*CAVQQY
Trigger: ATATTGTTGGACTGCACACCAACATTGACTTCTTAC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGTAAGAAGTCAATGTTaGTGTGCAGTCCAACAATAT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWVRSQC*CAVQQY
Trigger: ATATTGTTGGACTGCACACCAACATTGACTTCTTAC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGCTTCAAACTCTGGGTaGCCAGACAGGTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRASNSG*PDRLSK
Trigger: CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp CGCCCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: RPEFLVSSQKISIWGLECQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...ACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAGTCTTTCTCTGAACTaGACACCTGATGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRSLSLN*TPDGAQ
Trigger: CTGTGCCCCATCAGGTGTCCAGTTCAGAGAAAGACT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR TCA 90 bp CACTTTCTTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGAGGTCTTGGCCACTTaGATGATTTTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: HFLYCAILWRLYGMLHLHEVLAT*MIFSID
Trigger: ATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTC...ATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGGGGCCGATGGAATATaGTTCATCTGCCATATCTAC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRGADGI*FICHIY
Trigger: GTAGATATGGCAGATGAAGCATATTCCATCGGCCCC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp CACTTTCTTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: HFLYCAILWRLYGMLHLHKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...ATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATAATCTTCTCTCCTGCTaGAATTCTAAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: VFSRIISFALLATPLTEHNLLSC*NSKLPL
Trigger: GAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATT...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAAGTCAATGTTGGTGTaGAGTCCAACAATATTGTAC +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNKSMLV*SPTILY
Trigger: GTACAATATTGTTGGACTGCACACCAACATTGACTT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTATCTTCAATCTGCATaGTATAAGACCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNYLQSA*YKTHHG
Trigger: ACCATGATGGGTCTTATAGCATGCAGATTGAAGATA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACTATCTTCAATCTGCATaGTATAAGACCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNYLQSA*YKTHHG
Trigger: ACCATGATGGGTCTTATAGCATGCAGATTGAAGATA...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TACATGCCTCGGTGTGTCTACAAACTTCTCGATCAGCATAGCATCATCATTGAACAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: YMPRCVYKLLDQHSIIIEQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...TTCAATGATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS-3UTR CCA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKLEALPLFGGERRHYLTRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACTAGCTTCGAAGGCATaGCCCTGCAGAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRLASKA*PCRVIS
Trigger: AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp ATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGGACTTGGAAAGGTAAGAAGTCAATGTTaGTGTGCAGTCCAACAATAT +
Preference number: 4 (lower is better)
Translates to: ISGKCSLPRCKDYQGLGKVRSQC*CAVQQY
Trigger: ATATTGTTGGACTGCACACCAACATTGACTTCTTAC...CTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAAACTGCTAGACGAAAATaGAGAGAATTGATCATGTGC +
Preference number: 4 (lower is better)
Translates to: FGDFMVCSIFMAIITMRETARRK*RELIMC
Trigger: GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGT...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CCA 90 bp ATTAACAGAACATTTCAGGTAAGTGCAGTCTCCCTCGCTGTAAAGATTACCAAGTACTGTGCCATCCTTTaGAGACTTTATGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: INRTFQVSAVSLAVKITKYCAIL*RLYGML
Trigger: GAGCATACCATAAAGTCTCCAAAGGATGGCACAGTA...CTTGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAATGTTCTGTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCATGGCCATTTCCTTGCTaGAGTTTATTCCGATTCCCT +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSAWPFPC*SLFRFP
Trigger: AGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCA...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGACTGCTAGACGAAAATaGAGAGAATTGATATTGTAC +
Preference number: 4 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWTARRK*RELILY
Trigger: GTACAATATCAATTCTCTCCATTTTCGTCTAGCAGT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACCAACAATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRPTILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR TCA 90 bp TTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGCTTTGTCTCCAGCTTTaGCAAACACCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: FQDNQLRFTSNSINRTFQLCLQL*QTPFQW
Trigger: CCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAG...CTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACGATTCCCTTTTGTCTaGTTCTTCCTCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRRFPFV*FFLLKL
Trigger: GAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCAACAAGTACACAGCATTaGCATGGTGATCACCAAACA +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSATSTQH*HGDHQT
Trigger: TGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACAAAACTCCACAGTCCCTaGTCCAACATAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTKLHSP*SNIIYS
Trigger: GCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTT...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAACAGGATGTTCCACTTaGAGCCTTGTATTCATCTCC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRTGCST*SLVFIS
Trigger: GGAGATGAATACAAGGCTGCAAGTGGAACATCCTGT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATCAGCAGCAGCCATTATaGATTTGGATGTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VFSRIISFALLATPLTEHQQQPL*IWMCSL
Trigger: TAAAGAGCACATCCAAATCCATAATGGCTGCTGCTG...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp CCTGAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAAAGAGTTATTTCTTCCTaGCTCAAAGGAATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PEFLVSSQKISIWGLECQRVISS*LKGIFS
Trigger: AGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCT...TTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGATGGCCATTTCCTTGCTaGAGTTTATTCCGATTCCCT +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRWPFPC*SLFRFP
Trigger: AGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCA...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CCA 90 bp TTACAGCTATGGCTACATTTTATTGTAGTGGTCTGGAACCAAACCTGTAATAACTGGCCATTTCCTTGCTaGAGTTTATTCCGATTCCCT +
Preference number: 4 (lower is better)
Translates to: LQLWLHFIVVVWNQTCNNWPFPC*SLFRFP
Trigger: AGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCA...GTTATTACAGGTTTGGTTCCAGACCACTACAATAAAATGTAGCCATAGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRKFHVF*EKTASW
Trigger: CCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACTTTGTCTCCAGCTTTaGCAAACACCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRLCLQL*QTPFQW
Trigger: CCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp TTACAGCTATGGCTACATTTTATTGTAGTGGTCTGGAACCAAACCTGTAATAACGAATTGATATTGTACTaGCGAAGGCTGTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LQLWLHFIVVVWNQTCNNELILY*RRLYLS
Trigger: ACTGAGGTACAGCCTTCGTCAGTACAATATCAATTC...GTTATTACAGGTTTGGTTCCAGACCACTACAATAAAATGTAGCCATAGCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTTATCTTCAATCTGCATaGTATAAGACCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSYLQSA*YKTHHG
Trigger: ACCATGATGGGTCTTATAGCATGCAGATTGAAGATA...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp CACTTTCTTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATACACTTTCTTTACTGTaGCATCCTTTGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: HFLYCAILWRLYGMLHLHTLSLL*HPLETL
Trigger: TAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGT...ATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACACAGCCATTATGGATTTaGATGTGCTCTTTATACCCA +
Preference number: 4 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTQPLWI*MCSLYP
Trigger: TGGGTATAAAGAGCACATCCAAATCCATAATGGCTG...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGCAGAAGATAAGTATTTaGGGACTGGAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: SRIISFALLATPLTEHFRQKISI*GLECQS
Trigger: AGATTGACATTCCAGTCCCCAAATACTTATCTTCTG...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGATACTGTGCCATCCTTTaGAGACTTTATGGTATGCTC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRYCAIL*RLYGML
Trigger: GAGCATACCATAAAGTCTCCAAAGGATGGCACAGTA...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR TCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGACATGATTCTCCAATATaGAAGGTGTTCAGCATAAGC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRHDSPI*KVFSIS
Trigger: GCTTATGCTGAACACCTTTCATATTGGAGAATCATG...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAGAGAATTGATCATGTaGCTGAAGAGTGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRRELIM*LKSESV
Trigger: GACACTTTCACTCTTCAGGCACATGATCAATTCTCT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTATCTTCAATCTGCATaGTATAAGACCCATCATGGT +
Preference number: 4 (lower is better)
Translates to: VFSRIISFALLATPLTEHYLQSA*YKTHHG
Trigger: ACCATGATGGGTCTTATAGCATGCAGATTGAAGATA...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CCA 90 bp AATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTAAGTGCAGTAAGAAGTCAATGTTaGTGTGCAGTCCAACAATAT +
Preference number: 4 (lower is better)
Translates to: NQLRFTSNSINRTFQVSAVRSQC*CAVQQY
Trigger: ATATTGTTGGACTGCACACCAACATTGACTTCTTAC...TGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CCA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTTTTATTGTAGTGGTCTaGAACCAAACCTGTAATAAC +
Preference number: 4 (lower is better)
Translates to: EFLVSSQKISIWGLECQSFIVVV*NQTCNN
Trigger: GTTATTACAGGTTTGGTTCCAGACCACTACAATAAA...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR GCA 90 bp ATTTGGGGACTGGAATGTCAATCTCAATACTTCCTTCCTTGGAAAATAGGTAAATTATGGATTTGGATGTaGTCTTTATACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: IWGLECQSQYFLPWKIGKLWIWM*SLYPCL
Trigger: GAGACATGGGTATAAAGAGCACATCCAAATCCATAA...TTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495767.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR GCA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAAGTCAATGTTGGTGTaGAGTCCAACAATATTGTAC +
Preference number: 4 (lower is better)
Translates to: FSISIQSFSKTALYETPRKSMLV*SPTILY
Trigger: GTACAATATTGTTGGACTGCACACCAACATTGACTT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR GCA 90 bp AATAACTCCAGAGTATGCCTAGATTACATGAGTATGGAAATGGTTGATTATCCGACACTTTCTTTACTGTaGCATCCTTTGGAGACTTTA +
Preference number: 4 (lower is better)
Translates to: NNSRVCLDYMSMEMVDYPTLSLL*HPLETL
Trigger: TAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGT...CGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGAGTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CCA 90 bp ATAGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAAACTGCTAGACGAAAATaGAGAGAATTGATATTGTAC +
Preference number: 4 (lower is better)
Translates to: IVFSRIISFALLATPLTETARRK*RELILY
Trigger: GTACAATATCAATTCTCTCCATTTTCGTCTAGCAGT...TTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS TCA 90 bp ACACCGCAGAGGCCGCCGCCATGTCCCTGGAGCCCGGCCACTCCGTaGCTCCCCAGTACAGAGGCAGCTGCGTCCCACACGCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: TPQRPPPCPWSPATP*LPSTEAAASHTPNP
Trigger: CGGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCTCCAGGGACATGGCGGCGGCCTCTGCGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000466650.5
ENST00000476176.5
ENST00000487634.5
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS GCA 90 bp CTCCACACCCATGTCCTCGGCGGCAGGAGCAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCCGCCACCAGCAGCACCGACACCGCA +
Preference number: 5 (lower is better)
Translates to: LHTHVLGGRSRLGRR*HRFLSAATSSTDTA
Trigger: TGCGGTGTCGGTGCTGCTGGTGGCGGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGACATGGGTGTGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265594.9
ENST00000466650.5
ENST00000476176.5
ENST00000486226.1
ENST00000487634.5
ENST00000495767.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS GCA 90 bp TCCTGGATGGATAGCCTCGGCGGCAGGAGCAGGCTCGGGAGACGATaGCACCGGTTCCTCTCCGCCGCCACCAGCAGCACCGACACCGCA +
Preference number: 5 (lower is better)
Translates to: SWMDSLGGRSRLGRR*HRFLSAATSSTDTA
Trigger: TGCGGTGTCGGTGCTGCTGGTGGCGGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGCTATCCATCCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490284.5
CDS CCA 90 bp GCTGAAGCGTGGATGTGCGGAAGCGGGGAGAAAGGGAAGGGCTGGTaGGGATGTCTTCCTCCCGACGCCGTGACTGCCGGCAGAACCCCT +
Preference number: 5 (lower is better)
Translates to: AEAWMCGSGEKGKGW*GCLPPDAVTAGRTP
Trigger: AGGGGTTCTGCCGGCAGTCACGGCGTCGGGAGGAAGACATCCCCACCAGCCCTTCCCTTTCTCCCCGCTTCCGCACATCCACGCTTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS CCA 90 bp GACGGCGAGGGGAGCCTGGAGGATGGCGGGCCCAGTCCTCAGAAATaGAAAAACAGAAGCCAAAGGCGCGCTGAAGCGTGGATGTGCGGA +
Preference number: 5 (lower is better)
Translates to: DGEGSLEDGGPSPQK*KNRSQRRAEAWMCG
Trigger: TCCGCACATCCACGCTTCAGCGCGCCTTTGGCTTCTGTTTTTCCATTTCTGAGGACTGGGCCCGCCATCCTCCAGGCTCCCCTCGCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS CCA 90 bp GCCCGATGTAAACGGCTACGAGCTGCAGCGACGGCGAGGGGAGCCTaGAGGATGGCGGGCCCAGTCCTCAGAAATGGAAAAACAGAAGCC +
Preference number: 5 (lower is better)
Translates to: ARCKRLRAAATARGA*RMAGPVLRNGKTEA
Trigger: GGCTTCTGTTTTTCCATTTCTGAGGACTGGGCCCGCCATCCTCCAGGCTCCCCTCGCCGTCGCTGCAGCTCGTAGCCGTTTACATCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS TCA 90 bp CGGGCCCAGTCCTCAGAAATGGAAAAACAGAAGCCAAAGGCGCGCTaGAGCGTGGATGTGCGGAAGCGGGGAGAAAGGGAAGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RAQSSEMEKQKPKAR*SVDVRKRGEREGLV
Trigger: CACCAGCCCTTCCCTTTCTCCCCGCTTCCGCACATCCACGCTTCAGCGCGCCTTTGGCTTCTGTTTTTCCATTTCTGAGGACTGGGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp CTCTGCTGGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGTGTACACCCAGTTTTTaGGCTGTGCGCATCACCCTG +
Preference number: 5 (lower is better)
Translates to: LCWEGAGPMEYASSAFDGCTPSF*AVRITL
Trigger: CAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACA...CCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CAA 90 bp CAATGCCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATCATGGGGTCAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: QCRLAICCPHDQLRNHGVNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...GACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp GGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: GRERGRWNMLHLPSMGKMVLHGS*PPHPCP
Trigger: AGGACATGGGTGTGGAGGCAAAGAACCATGAAGTAC...CATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTGGCTCGAGCAAGCAGTaGCTGAAGAGCCCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLGSSKQ*LKSPLK
Trigger: CTTGAGGGGGCTCTTCAGCAACTGCTTGCTCGAGCC...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR CAA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCGTCATGGCTTTCTCCTaGAGGATGAGACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCVMAFS*RMRPRA
Trigger: AGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGVLHGS*PPHPCP
Trigger: AGGACATGGGTGTGGAGGCAAAGAACCATGAAGTAC...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp GGGAGGGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: GRERGRWNMLHLPSMGKMRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...CATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: VCSIFMAIITMRESPAFTGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATGTCATGGCTTTCTCCTaGAGGATGAGACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHVMAFS*RMRPRA
Trigger: AGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp GTGAAAGTGTCGGTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCGAAAATGGAGAGAATaGATCATGTGCCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: VKVSVMAFSLRMRPRAAWRKWRE*IMCLKS
Trigger: ACTCTTCAGGCACATGATCAATTCTCTCCATTTTCG...CCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS GCA 90 bp AGAATTGATATTGTACTGACGAAGGCTGTACCTCAGTTTTGTCAATaGCGCCTGGCGATCTGCTGCCCACACGACCAGCTTCGCAATCAT +
Preference number: 5 (lower is better)
Translates to: RIDIVLTKAVPQFCQ*RLAICCPHDQLRNH
Trigger: ATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATCAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCVLHGS*PPHPCP
Trigger: AGGACATGGGTGTGGAGGCAAAGAACCATGAAGTAC...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466650.5
ENST00000487634.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp GGAGCGGGGCCGATGGAATATGCTTCATCTGCCTTCGATGGGAAAGATGGATGCTTTGCAATGAGGACCTaGGTAATGTTTCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GAGPMEYASSAFDGKDGCFAMRT*VMFLPV
Trigger: CACAGGAAGAAACATTACCAAGGTCCTCATTGCAAA...GCATCCATCTTTCCCATCGAAGGCAGATGAAGCATATTCCATCGGCCCCGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486226.1
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTGTACACCCAGTTTTTaGGCTGTGCGCATCACCCTG +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLCTPSF*AVRITL
Trigger: CAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYGWPDR*SKKSML
Trigger: CAACATTGACTTCTTACTCAACCTGTCTGGCCACCC...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp TGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTGGCATAAAGACTCTTaGGCTGCAGCCTTCCGACTG +
Preference number: 5 (lower is better)
Translates to: CSIFMAIITMRESPAFTLWHKDS*AAAFRL
Trigger: CAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCA...CAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp ATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCATGGCTTTCTCCTaGAGGATGAGACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: MLHLHGDHNHEGISRFHFVMAFS*RMRPRA
Trigger: AGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC...AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGGTCATGGCTTTCTCCTaGAGGATGAGACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWVMAFS*RMRPRA
Trigger: AGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp AACTTCGTCTCCTTGCCGTACTCCAGTTTCAATCCTGGTGGAAGGGTCTGCTCGATCTGCCTGTGGCTGTaGTGTACTTCATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: NFVSLPYSSFNPGGRVCSICLWL*CTSWFF
Trigger: AAAGAACCATGAAGTACACAACAGCCACAGGCAGAT...CGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CAA 90 bp CCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTGCAGCCATTATGGATTaGGATGTGCTGTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PHHDNPPQQVLQQQPLWIAAIMD*DVLCSR
Trigger: TCTGCTGCACAGCACATCCAAATCCATAATGGCTGC...AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGVLHGS*PPHPCP
Trigger: AGGACATGGGTGTGGAGGCAAAGAACCATGAAGTAC...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTGTACACCCAGTTTTTaGGCTGTGCGCATCACCCTG +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWCTPSF*AVRITL
Trigger: CAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GGCACTGGTCTGATTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: GTGLIGPHHDNPPQQVLQRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...CTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGGWPDR*SKKSML
Trigger: CAACATTGACTTCTTACTCAACCTGTCTGGCCACCC...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGTGGCATAAAGACTCTTaGGCTGCAGCCTTCCGACTG +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWWHKDS*AAAFRL
Trigger: CAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCA...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATGGCATAAAGACTCTTaGGCTGCAGCCTTCCGACTG +
Preference number: 5 (lower is better)
Translates to: PEKLEALPLFGGERRHYLWHKDS*AAAFRL
Trigger: CAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGTCATGGCTTTCTCCTaGAGGATGAGACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNVMAFS*RMRPRA
Trigger: AGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp TCTGCTCGAGGAGTAGAGAGGTGCACTAATGGGCCTGCCACAGGCATGAAGTTATATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SARGVERCTNGPATGMKLYSDSL*SDSSSS
Trigger: TGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATA...TAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp ATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACCTTGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: ILPPQTRLKECVCWPEHLGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...AAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACTGGCATAAAGACTCTTaGGCTGCAGCCTTCCGACTG +
Preference number: 5 (lower is better)
Translates to: CAILWRLYGMLHLHGDHNWHKDS*AAAFRL
Trigger: CAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCA...GTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CAA 90 bp GTCATGGCTTTCTCCTTGAGGATGAGACCCAGGGCTGCCTGGCATAAAGACTCTACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: VMAFSLRMRPRAAWHKDSTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...AGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATCGGATTCTTGCCATTTaGGGTGTGTGTTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRILAI*GVCCLF
Trigger: GAAGAGACAACACACACCCAAAATGGCAAGAATCCG...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCGTGCCAGCGGATTCTaGCCATTTTGGGTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNRASGF*PFWVCV
Trigger: AACACACACCCAAAATGGCAAGAATCCGCTGGCACG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR CAA 90 bp GATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGATTTGGATGTGCGATAGCCTGTGGCTGTaGTGTACTTCATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: DNPPQQVLQQQPLWIWMCDSLWL*CTSWFF
Trigger: AAAGAACCATGAAGTACACAACAGCCACAGGCTATC...GCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTACTAGCTGTGTTTCGTaGAGGAAGTCGTTGATCCCT +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLTSCVS*RKSLIP
Trigger: AGGGATCAACGACTTCCTCAACGAAACACAGCTAGT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAAGCAGCCATTATGGATaGGATGTGCTGTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PEKLEALPLFGGERRHYLSSHYG*DVLCSR
Trigger: TCTGCTGCACAGCACATCCAATCCATAATGGCTGCT...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610757.4
CDS-3UTR CAA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: EKLEALPLFGGERRHYLTVLHGS*PPHPCP
Trigger: AGGACATGGGTGTGGAGGCAAAGAACCATGAAGTAC...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATGTACACCCAGTTTTTaGGCTGTGCGCATCACCCTG +
Preference number: 5 (lower is better)
Translates to: FGDFMVCSIFMAIITMRECTPSF*AVRITL
Trigger: CAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACA...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TTGGTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: LVLTMITLHNRYSSSSHYRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...ATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: VASAHYSLFQTSTQHCHGNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...ACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: PEKLEALPLFGGERRHYLGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: SRIISFALLATPLTEHFRGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNGWPDR*SKKSML
Trigger: CAACATTGACTTCTTACTCAACCTGTCTGGCCACCC...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATCTGCCTGTGGCTGTaGTGTACTTCATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLICLWL*CTSWFF
Trigger: AAAGAACCATGAAGTACACAACAGCCACAGGCAGAT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492597.5
ENST00000497830.5
CDS-3UTR CAA 90 bp GTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTGATAGCCTGTGGCTGTaGTGTACTTCATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: VCSIFMAIITMRESPAFTDSLWL*CTSWFF
Trigger: AAAGAACCATGAAGTACACAACAGCCACAGGCTATC...AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495767.5
CDS TCA 90 bp AATAATTCCTTCTTGCTTACAAAGTTCAGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGGATGGATAGCCTCGGCGGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: NNSFLLTKFSKFHVF*EKTASWMDSLGGRS
Trigger: GCTCCTGCCGCCGAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490284.5
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCTTTGCAATGAGGACCTaGGTAATGTTTCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGFAMRT*VMFLPV
Trigger: CACAGGAAGAAACATTACCAAGGTCCTCATTGCAAA...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATTTTGCAATGAGGACCTaGGTAATGTTTCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHFAMRT*VMFLPV
Trigger: CACAGGAAGAAACATTACCAAGGTCCTCATTGCAAA...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGTGTACACCCAGTTTTTaGGCTGTGCGCATCACCCTG +
Preference number: 5 (lower is better)
Translates to: SRIISFALLATPLTEHFRCTPSF*AVRITL
Trigger: CAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACA...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GTCCTCACCATGATAACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATGGAAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: VLTMITLHNRYSSSSHYGSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...TCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490284.5
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp CTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTGAGCACACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: LILPPQTRLKECVCWPEHTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...GTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TCGATCAGCATAGCATCATCATTGAAAGACTTCTTAGCTTCTCTCCGTGCTGACGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SISIASSLKDFLASLRADGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...GTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACAGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: SVFQDNQLRFTSNSINRTGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...TGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGGCTGTACCTCAGTTTaGTCAATGCCGCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: FQDNQLRFTSNSINRTFQGCTSV*SMPPGD
Trigger: ATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCC...CTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCGAAAATGGAGAGAATaGATCATGTGCCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGRKWRE*IMCLKS
Trigger: ACTCTTCAGGCACATGATCAATTCTCTCCATTTTCG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTTTACTGTGCCATCCTTaGGAGACTTTATGGTATGCT +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLLLCHP*ETLWYA
Trigger: AGCATACCATAAAGTCTCCAAAGGATGGCACAGTAA...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATTATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHYSDSL*SDSSSS
Trigger: TGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATA...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTGGATGTGCTGTGCAGCAGAGGTCTTGGCCACTTGAATGATTTTCTCCATAGAATCTGCCTGTGGCTGTaGTGTACTTCATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LDVLCSRGLGHLNDFLHRICLWL*CTSWFF
Trigger: AAAGAACCATGAAGTACACAACAGCCACAGGCAGAT...TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGCACATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS-3UTR CAA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAAGCAGCCATTATGGATTaGGATGTGCTGTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: FGDFMVCSIFMAIITMREAAIMD*DVLCSR
Trigger: TCTGCTGCACAGCACATCCAAATCCATAATGGCTGC...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497830.5
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCATTTTGGGTGTGTGTaGTCTCTTCCCCTACTTATG +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWHFGCV*SLPLLM
Trigger: CATAAGTAGGGGAAGAGACAACACACACCCAAAATG...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCTGTGGAAGGTACATTaGCTCTTCTTGACAACTTCA +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGLWKVH*LFLTTS
Trigger: TGAAGTTGTCAAGAAGAGCAAATGTACCTTCCACAG...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAGTCATCTGATAGCGTaGTTCAAACTTGGGTACAAG +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHSHLIA*FKLGYK
Trigger: CTTGTACCCAAGTTTGAACAACGCTATCAGATGACT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: EKLEALPLFGGERRHYLTNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GTCGCCTCTGCACACTACAGTCTCTTTCAAACAAGTACACAGCATTGCCATGGTACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: VASAHYSLFQTSTQHCHGTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...ACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp AAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCAGTAAGAAGTCAATGTaGGTGTGCAGTCCAACAATA +
Preference number: 5 (lower is better)
Translates to: KLEALPLFGGERRHYLTGSKKSM*VCSPTI
Trigger: TATTGTTGGACTGCACACCAACATTGACTTCTTACT...GCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAGTAAGAAGTCAATGTaGGTGTGCAGTCCAACAATA +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHSKKSM*VCSPTI
Trigger: TATTGTTGGACTGCACACCAACATTGACTTCTTACT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp GATATTCAGTCTTCTTCCACTGCTAGACGAAAATGGAGAGAATTGATCATGTGCGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: DIQSSSTARRKWRELIMCGWPDR*SKKSML
Trigger: CAACATTGACTTCTTACTCAACCTGTCTGGCCACCC...GCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATTACTGTGCCATCCTTaGGAGACTTTATGGTATGCT +
Preference number: 5 (lower is better)
Translates to: PEKLEALPLFGGERRHYLLLCHP*ETLWYA
Trigger: AGCATACCATAAAGTCTCCAAAGGATGGCACAGTAA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTATATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PEKLEALPLFGGERRHYLYSDSL*SDSSSS
Trigger: TGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATA...TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAAGCAGAGTCTGTGCCCTaGAACACTAAACTGTCAATC +
Preference number: 5 (lower is better)
Translates to: FGDFMVCSIFMAIITMREAESVP*NTKLSI
Trigger: GATTGACAGTTTAGTGTTCAAGGGCACAGACTCTGC...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTTTGCAATGAGGACCTaGGTAATGTTTCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNFAMRT*VMFLPV
Trigger: CACAGGAAGAAACATTACCAAGGTCCTCATTGCAAA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CCCAGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: PRKAGGTSSFWWREKTLLSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...AAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTCCAGCTAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FMAIITMRESPAFTLSPASIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...AGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp CTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGCCATAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LEALPLFGGERRHYLTGHSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...ATGGCCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWTGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp CTTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCACAGGCATGAAGTTATaGCTAGGATCTTCTGCATAT +
Preference number: 5 (lower is better)
Translates to: LLSDSSSSNSTKGVCLLATGMKL*LGSSAY
Trigger: ATATGCAGAAGATCCTAGCAATAACTTCATGCCTGT...GGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGAGTAAGAAGTCAATGTaGGTGTGCAGTCCAACAATA +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWSKKSM*VCSPTI
Trigger: TATTGTTGGACTGCACACCAACATTGACTTCTTACT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp TCCATCTTCATGGCGATCATAACCATGAGGGAATCTCCCGCTTTCACTTTGTCTAGTAAGAAGTCAATGTaGGTGTGCAGTCCAACAATA +
Preference number: 5 (lower is better)
Translates to: SIFMAIITMRESPAFTLSSKKSM*VCSPTI
Trigger: TATTGTTGGACTGCACACCAACATTGACTTCTTACT...AGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGATGGCATAAAGACTCTTaGGCTGCAGCCTTCCGACTG +
Preference number: 5 (lower is better)
Translates to: FSISIQSFSKTALYETPRWHKDS*AAAFRL
Trigger: CAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCA...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACCGAAAATGGAGAGAATaGATCATGTGCCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNRKWRE*IMCLKS
Trigger: ACTCTTCAGGCACATGATCAATTCTCTCCATTTTCG...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp AAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTGGACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: KAGGTSSFWWREKTLLNWTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...CCAGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTTTACTGTGCCATCCTTaGGAGACTTTATGGTATGCT +
Preference number: 5 (lower is better)
Translates to: EKLEALPLFGGERRHYLTLLCHP*ETLWYA
Trigger: AGCATACCATAAAGTCTCCAAAGGATGGCACAGTAA...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNYSDSL*SDSSSS
Trigger: TGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATA...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTTATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EKLEALPLFGGERRHYLTYSDSL*SDSSSS
Trigger: TGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATA...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCC +
Preference number: 5 (lower is better)
Translates to: FSRIISFALLATPLTEHFVLHGS*PPHPCP
Trigger: GGGACATGGGTGTGGAGGCAAAGAACCATGAAGTAC...GAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS TCA 90 bp AATAATTCCTTCTTGCTTACAAAGTTCAGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGGATGGATAGCCTGTGCAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: NNSFLLTKFSKFHVF*EKTASWMDSLCSRG
Trigger: ACCTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000476176.5
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGGGTGGCCAGACAGGTaGAGTAAGAAGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: FSISIQSFSKTALYETPRGWPDR*SKKSML
Trigger: CAACATTGACTTCTTACTCAACCTGTCTGGCCACCC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000610757.4
CDS-3UTR CAA 90 bp GGATCTTCTGCATATATTCTAGCTTCGAAGGCATGGCCCTGCAGAGTTATTTCTACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: GSSAYILASKAWPCRVISTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...AGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp GAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACTACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: EKLEALPLFGGERRHYLTTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...AGTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTTTGTCTGATTCTTCCTCCTCAAACTCGACTAAAGGAGTGTGTCTGTTGGCCTACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: FCLILPPQTRLKECVCWPTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...AGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TTTGGAGACTTTATGGTATGCTCCATCTTCATGGCGATCATAACCATGAGGGAATTACTGTGCCATCCTTaGGAGACTTTATGGTATGCT +
Preference number: 5 (lower is better)
Translates to: FGDFMVCSIFMAIITMRELLCHP*ETLWYA
Trigger: AGCATACCATAAAGTCTCCAAAGGATGGCACAGTAA...TTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp GTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTCACTGCCAGAGTTATaGCCACCAAAGCTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: VFSRIISFALLATPLTEHSLPEL*PPKLRA
Trigger: AGCTCTAAGCTTTGGTGGCAATAACTCTGGCAGTGA...ATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS TCA 90 bp AATAATTCCTTCTTGCTTACAAAGTTCAGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGGATGGATAGCCTGTGGCTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: NNSFLLTKFSKFHVF*EKTASWMDSLWLLC
Trigger: ACACAACAGCCACAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
CDS TCA 90 bp GACAAAATAATTTCCCAGCTCTGTGGAAGGTACATTTGCTCTTCTTaGCAACTTCACTCTTCTAACAATGAGAAGGAACTCCAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: DKIISQLCGRYICSS*QLHSSNNEKELQES
Trigger: AGACTCCTGGAGTTCCTTCTCATTGTTAGAAGAGTGAAGTTGTCAAGAAGAGCAAATGTACCTTCCACAGAGCTGGGAAATTATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp CACTTTCTTTACTGTGCCATCCTTTGGAGACTTTATGGTATGCTCCATCTTCATTTTGCAATGAGGACCTaGGTAATGTTTCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: HFLYCAILWRLYGMLHLHFAMRT*VMFLPV
Trigger: CACAGGAAGAAACATTACCAAGGTCCTCATTGCAAA...ATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp AGAAAAGCTGGAGGCACTTCCTCTTTTTGGTGGAGAGAGAAGACACTACTTAACAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RKAGGTSSFWWREKTLLNSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...GTTAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: FQDNQLRFTSNSINRTFQNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...CTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: FSISIQSFSKTALYETPRGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp ATAGTGTTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAAGGAAACTTCGTCTCCTaGCCGTACTCCAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: IVFSRIISFALLATPLTEGNFVS*PYSSFN
Trigger: ATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCC...TTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp GAGTTTCTTGTGAGCTCACAGAAGATAAGTATTTGGGGACTGGAATGTCAATCTTATTCCGATTCCCTTTaGTCTGATTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EFLVSSQKISIWGLECQSYSDSL*SDSSSS
Trigger: TGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATA...AGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCACAAGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS TCA 90 bp CTGAGTCATCTGATAGCGTTGTTCAAACTTGGGTACAAGAGTTTTTaGCAAAATAATTTCCCAGCTCTGTGGAAGGTACATTTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSHLIALFKLGYKSF*QNNFPALWKVHLLF
Trigger: GAAGAGCAAATGTACCTTCCACAGAGCTGGGAAATTATTTTGTCAAAAACTCTTGTACCCAAGTTTGAACAACGCTATCAGATGACTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp TTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: FQDNQLRFTSNSINRTFQRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...CTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAACAGGATGTTCCACTaGCAGCCTTGTATTCATCTC +
Preference number: 5 (lower is better)
Translates to: FSISIQSFSKTALYETPRNRMFH*QPCIHL
Trigger: GAGATGAATACAAGGCTGCAAGTGGAACATCCTGTT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGCGAAAATGGAGAGAATaGATCATGTGCCTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: FQDNQLRFTSNSINRTFQRKWRE*IMCLKS
Trigger: ACTCTTCAGGCACATGATCAATTCTCTCCATTTTCG...CTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp AATAACTCCAGAGTATGCCTAGATTACATGAGTATGGAAATGGTTGATTATCCGAGAGGTCTTGGCCACTaGAATGATTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: NNSRVCLDYMSMEMVDYPRGLGH*NDFLHR
Trigger: TCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCT...CGGATAATCAACCATTTCCATACTCATGTAATCTAGGCATACTCTGGAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp TCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGGAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SRIISFALLATPLTEHFRSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...CCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495767.5
ENST00000497830.5
ENST00000497959.5
ENST00000629669.2
CDS-3UTR CAA 90 bp TACATGAGTATGGAAATGGTTGATTATCCGAGGAGACGAAAACTGTTTTTACCATTACTGTGCCATCCTTaGGAGACTTTATGGTATGCT +
Preference number: 5 (lower is better)
Translates to: YMSMEMVDYPRRRKLFLPLLCHP*ETLWYA
Trigger: AGCATACCATAAAGTCTCCAAAGGATGGCACAGTAA...TGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp TACATGAGTATGGAAATGGTTGATTATCCGAGGAGACGAAAACTGTTTTTACCACTTAGAGCTCAAAATTaGAAACAGAGCTGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: YMSMEMVDYPRRRKLFLPLRAQN*KQSWSQ
Trigger: CTGACTCCAGCTCTGTTTCAAATTTTGAGCTCTAAG...TGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp TTTTCCAGGATAATCAGCTTCGCTTTACTAGCAACTCCATTAACAGAACATTTCAGTAAGAAGTCAATGTaGGTGTGCAGTCCAACAATA +
Preference number: 5 (lower is better)
Translates to: FSRIISFALLATPLTEHFSKKSM*VCSPTI
Trigger: TATTGTTGGACTGCACACCAACATTGACTTCTTACT...GAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495767.5
ENST00000497830.5
CDS-3UTR CAA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: FSISIQSFSKTALYETPRTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS-3UTR CAA 90 bp TACATGAGTATGGAAATGGTTGATTATCCGAGGAGACGAAAACTGTTTTTACCAACTTTGTCTCCAGCTTaGACAAACACCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: YMSMEMVDYPRRRKLFLPTLSPA*TNTFSM
Trigger: CATTGAAAAGGTGTTTGTCAAAGCTGGAGACAAAGT...TGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS-3UTR CAA 90 bp TTCAGCATAAGCATACAATCATTTAGTAAAACTGCTCTTTATGAGACCCCCAGAAGCATAGCATCATCATaGAAAGACTTCTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FSISIQSFSKTALYETPRSIASS*KDFLAS
Trigger: AGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCT...TCTGGGGGTCTCATAAAGAGCAGTTTTACTAAATGATTGTATGCTTATGCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265594.9
ENST00000492597.5
ENST00000497830.5
ENST00000497959.5
ENST00000610757.4
ENST00000629669.2
CDS CCA 72 bp TGGATGTGCGGAAGCGGGGAGAAAGGGAAGGGCTGGTaGGGATGTCTTCCTCCCGACGCCGTGACTGCCGGC +
Preference number: 6 (lower is better)
Translates to: WMCGSGEKGKGW*GCLPPDAVTAG
Trigger: GCCGGCAGTCACGGCGTCGGGAGGAAGACATCCCCACCAGCCCTTCCCTTTCTCCCCGCTTCCGCACATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS GCA 72 bp CCCGGCCACTCCGTGACTCCCCAGTACAGAGGCAGCTaGGTCCCACACGCCAAACCCGTTCCTCCACTACGA +
Preference number: 6 (lower is better)
Translates to: PGHSVTPQYRGS*VPHAKPVPPLR
Trigger: TCGTAGTGGAGGAACGGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000466650.5
ENST00000476176.5
ENST00000490284.5
ENST00000497830.5
ENST00000610757.4
ENST00000629669.2
CDS GCA 72 bp TGCCTCCACACCCATGTCCTGGGTCCAGCCTGTCCGTaGCAGCGGATTCTTGCCATTTTGGGTGTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: CLHTHVLGPACP*QRILAILGVCC
Trigger: ACAACACACACCCAAAATGGCAAGAATCCGCTGGCACGGACAGGCTGGACCCAGGACATGGGTGTGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS CCA 72 bp TGTACTTCATGGTTCTTTGCCTCCACACCCATGTCCTaGGTCCAGCCTGTCCGTGCCAGCGGATTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: CTSWFFASTPMS*VQPVRASGFLP
Trigger: TGGCAAGAATCCGCTGGCACGGACAGGCTGGACCCAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS CCA 72 bp AAATGGAAAAACAGAAGCCAAAGGCGCGCTGAAGCGTaGATGTGCGGAAGCGGGGAGAAAGGGAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: KWKNRSQRRAEA*MCGSGEKGKGW
Trigger: CCAGCCCTTCCCTTTCTCCCCGCTTCCGCACATCCACGCTTCAGCGCGCCTTTGGCTTCTGTTTTTCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS CAA 90 bp GAATATGCTTCATCTGCCTGTGGCTGTTGTGTACTTCATGGTTCTTaGCCTCCACACCCATGTCCTGGGTCCAGCCTGTCCGTGCCAGCG +
Preference number: 6 (lower is better)
Translates to: EYASSACGCCVLHGS*PPHPCPGSSLSVPA
Trigger: CGCTGGCACGGACAGGCTGGACCCAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGCAGATGAAGCATATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS CCA 72 bp TCCTGGATGGATAGCCTGTGGCTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCCATGTCCTCGGCGGCA +
Preference number: 6 (lower is better)
Translates to: SWMDSLWLLCTS*FFASTPMSSAA
Trigger: TGCCGCCGAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGCTATCCATCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5
CDS CAA 72 bp GGCATCCCGGCCCCATTTCTTACTAGCTGTGTTTCGTaGAGGAAGTCGTTGATCCCTTTGGGCTTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: GIPAPFLTSCVS*RKSLIPLGFPG
Trigger: TCCGGGGAAGCCCAAAGGGATCAACGACTTCCTCAACGAAACACAGCTAGTAAGAAATGGGGCCGGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS TCA 72 bp TCCTCAGAAATGGAAAAACAGAAGCCAAAGGCGCGCTaGAGCGTGGATGTGCGGAAGCGGGGAGAAAGGGAA +
Preference number: 6 (lower is better)
Translates to: SSEMEKQKPKAR*SVDVRKRGERE
Trigger: TTCCCTTTCTCCCCGCTTCCGCACATCCACGCTTCAGCGCGCCTTTGGCTTCTGTTTTTCCATTTCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS CCA 72 bp AACCCTCCACAACAGGTACTCCAGCAGCAGCCATTATaGATTGGATGTGCTGTGCAGCAGAGGTCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: NPPQQVLQQQPL*IGCAVQQRSWP
Trigger: TGGCCAAGACCTCTGCTGCACAGCACATCCAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610757.4
CDS CCA 72 bp ATATGCTTCATCTGCCTGTGGCTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCCATGTCCTCGGCGGCA +
Preference number: 6 (lower is better)
Translates to: ICFICLWLLCTS*FFASTPMSSAA
Trigger: TGCCGCCGAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGCAGATGAAGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466650.5
ENST00000497830.5
CDS CAA 72 bp GGTCCAGCCTGTCCGTGCCAGCGGATTCTTGCCATTTaGGGTGTGTGTTGTCTCTTCCCCTACTTATGTTAC +
Preference number: 6 (lower is better)
Translates to: GPACPCQRILAI*GVCCLFPYLCY
Trigger: GTAACATAAGTAGGGGAAGAGACAACACACACCCAAAATGGCAAGAATCCGCTGGCACGGACAGGCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS CCA 72 bp ATATGCTTCATCTGCCTGTGGCTGTTGTGTACTTCATaGTTCTTTGCCTCCACACCCATGTCCTGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: ICFICLWLLCTS*FFASTPMSWVQ
Trigger: CTGGACCCAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGCAGATGAAGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS CAA 72 bp TCCGTGCCAGCGGATTCTTGCCATTTTGGGTGTGTGTaGTCTCTTCCCCTACTTATGTTACCAGAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: SVPADSCHFGCV*SLPLLMLPERR
Trigger: CCTTCTCTCTGGTAACATAAGTAGGGGAAGAGACAACACACACCCAAAATGGCAAGAATCCGCTGGCACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492597.5
CDS TCA 72 bp AAGGAACTCCAGGAGTCTTTCTCTGAACTGGACACCTaGTGGGGCACAGCTGAACTGAAAAATGGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: KELQESFSELDT*WGTAELKNGFE
Trigger: CTCAAAGCCATTTTTCAGTTCAGCTGTGCCCCATCAGGTGTCCAGTTCAGAGAAAGACTCCTGGAGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497959.5
CDS TCA 72 bp TTCTTGCTTACAAAGTTCAGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGGATGGATAGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: FLLTKFSKFHVF*EKTASWMDSLG
Trigger: GCCGAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490284.5
CDS TCA 72 bp TTCTTGCTTACAAAGTTCAGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGGATGGATAGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: FLLTKFSKFHVF*EKTASWMDSLC
Trigger: GCACAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265594.9
ENST00000476176.5
ENST00000492597.5
ENST00000497959.5
ENST00000629669.2
CDS TCA 72 bp TTCTTGCTTACAAAGTTCAGCAAATTCCATGTTTTCTaGGAGAAAACCGCATCCTGGATGGATAGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: FLLTKFSKFHVF*EKTASWMDSLW
Trigger: CCACAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487634.5
ENST00000495767.5