RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCC (Homo sapiens)

Ensembl gene IDs: ENSG00000171444

Ensembl transcript IDs: ENST00000302475.8, ENST00000408903.7, ENST00000502648.5, ENST00000505604.1, ENST00000506605.6, ENST00000511242.1, ENST00000511847.2, ENST00000514701.5, ENST00000515367.6, ENST00000624689.3

Found 1116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGATACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: LDTVHNVTMASRPKG*VGALHCPSADLPAS
Trigger: GCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR GCA 90 bp CAAGGGTTGAGTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTaGCAGCCTTCCCTTTCCTCCTCCTCCCAACAAGTACATGGGCCC +
Preference number: 1 (lower is better)
Translates to: QGLSWGTPLSKCRPT*QPSLSSSSQQVHGP
Trigger: GGGCCCATGTACTTGTTGGGAGGAGGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp CTTTCCTCCTCCTCCCAACAAGTACATGGGCCCTTCTGTCCCCAGTaGCCTGCTGCAGTTTACTTCCCATGGGCAGAACTCCGGTGCGTG +
Preference number: 1 (lower is better)
Translates to: LSSSSQQVHGPFCPQ*PAAVYFPWAELRCV
Trigger: CACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAGGAGGAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: YSPQCHHGQSPQGLS*GTPLSKCRPTCQPS
Trigger: GGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp GGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCCATTGTCCAA +
Preference number: 1 (lower is better)
Translates to: GGKSGHLWIQSTMSP*PVAPRVELGHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp TGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTaGATACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTT +
Preference number: 1 (lower is better)
Translates to: CLHAVVGPGGKSGHL*IQSTMSPWPVAPRV
Trigger: AACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR TCA 90 bp GGATACAATGGAAAATCTTACAGAAACAAATGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGC +
Preference number: 1 (lower is better)
Translates to: GYNGKSYRNKCLGSH*CTAARPEEEGESEC
Trigger: GCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGTAAGATTTTCCATTGTATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp GTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTaGAGTATCCTCCAGCGAACAGAAGGCTGTGGAATTTGTATCATG +
Preference number: 1 (lower is better)
Translates to: VVAFRIQLSALRTGG*SILQRTEGCGICIM
Trigger: CATGATACAAATTCCACAGCCTTCTGTTCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 90 bp CCATTCCCTCACTCTGTCCCCGTCATGACAACAGGAGCTAAGTCTTaGACTGGGGGTTACACAGCACTCTTAAGTAGGCGTGATAAGTTT +
Preference number: 1 (lower is better)
Translates to: PFPHSVPVMTTGAKS*TGGYTALLSRRDKF
Trigger: AAACTTATCACGCCTACTTAAGAGTGCTGTGTAACCCCCAGTTCAAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGTGAGGGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp CCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAACAGAAGGCTGTaGAATTTGTATCATGCTCTGAAAATAGACCTACCCGTAGCTTAT +
Preference number: 1 (lower is better)
Translates to: PPNWWLEYPPANRRL*NLYHALKIDLPVAY
Trigger: ATAAGCTACGGGTAGGTCTATTTTCAGAGCATGATACAAATTCCACAGCCTTCTGTTCGCTGGAGGATACTCCAGCCACCAGTTCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 90 bp TACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACAAATGTCTaGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: YQKEDTMENLTETNV*DPTDAQPPDQKRRG
Trigger: CCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR TCA 90 bp AAAAAGATTCCCAGCTCTAAGTCTTGGATATTAATAAGGCTCCACTaGGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGC +
Preference number: 1 (lower is better)
Translates to: KKIPSSKSWILIRLH*EGEIPESRERSLPS
Trigger: GCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAATATCCAAGACTTAGAGCTGGGAATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR GCA 90 bp GCCTCTATCTTAAAGTTGAGACCCGGGACTTGGAAACCAAAGCCTTaGTGTAGTAAACAAATCAGCAGTCCTTTTAAATGCTGGAGGCAC +
Preference number: 1 (lower is better)
Translates to: ASILKLRPGTWKPKP*CSKQISSPFKCWRH
Trigger: GTGCCTCCAGCATTTAAAAGGACTGCTGATTTGTTTACTACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp CCAAAGCCTTGCTGTAGTAAACAAATCAGCAGTCCTTTTAAATGCTaGAGGCACACACAGGTCTGTTTTCCCATGAAGCAGGAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: PKPCCSKQISSPFKC*RHTQVCFPMKQEER
Trigger: TCTTTCCTCCTGCTTCATGGGAAAACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACTGCTGATTTGTTTACTACAGCAAGGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp TCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTaGAAACCAAAGCCTTGCTGTAGTAAACAAATCAGCAGTCCTTTT +
Preference number: 1 (lower is better)
Translates to: SPLMAASILKLRPGT*KPKPCCSKQISSPF
Trigger: AAAAGGACTGCTGATTTGTTTACTACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 90 bp TTGTCCTTAGGTAGAGACAGGTCCAGAGCTACAAATGCACCCATGTaGAAGAGATTTGATTCAGCAGAACAGCAATTATGTAGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: LSLGRDRSRATNAPM*KRFDSAEQQLCSAL
Trigger: CAGGGCACTACATAATTGCTGTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGTCTCTACCTAAGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR TCA 90 bp TGGGCTCTAATTTGGACTTCCTTTTGGAGTAGAATGTCAAGGCTCTaGCTTAGAAGAGGTCCCTCTAAAATATTGCTGCAGGCTCAGAGA +
Preference number: 1 (lower is better)
Translates to: WALIWTSFWSRMSRL*LRRGPSKILLQAQR
Trigger: TCTCTGAGCCTGCAGCAATATTTTAGAGGGACCTCTTCTAAGTCAGAGCCTTGACATTCTACTCCAAAAGGAAGTCCAAATTAGAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR GCA 90 bp AAACCAAAGCCTTGCTGTAGTAAACAAATCAGCAGTCCTTTTAAATaGTGGAGGCACACACAGGTCTGTTTTCCCATGAAGCAGGAGGAA +
Preference number: 1 (lower is better)
Translates to: KPKPCCSKQISSPFK*WRHTQVCFPMKQEE
Trigger: TTCCTCCTGCTTCATGGGAAAACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACTGCTGATTTGTTTACTACAGCAAGGCTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR GCA 90 bp GTAGAATGTCAAGGCTCTGACTTAGAAGAGGTCCCTCTAAAATATTaGTGCAGGCTCAGAGAAGACTTAGTGCATGCATCTGAAAGGAGA +
Preference number: 1 (lower is better)
Translates to: VECQGSDLEEVPLKY*CRLREDLVHASERR
Trigger: TCTCCTTTCAGATGCATGCACTAAGTCTTCTCTGAGCCTGCAGCAATATTTTAGAGGGACCTCTTCTAAGTCAGAGCCTTGACATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR GCA 90 bp GATGGCACTCGCAACTACGGACAGAAGTCTCTTTTGCTTGTGATTTaGACAGTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATA +
Preference number: 1 (lower is better)
Translates to: DGTRNYGQKSLLLVI*TVGFVCLSPTMGNI
Trigger: TATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAACTGTGCAAATCACAAGCAAAAGAGACTTCTGTCCGTAGTTGCGAGTGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 90 bp CTAGTCAAGGATGTGGTTTTACATAGCAGTTGCTATTTCCGGGACTaGATGATTTCTTCCTCTTGGTCACATGCAAAATCTCACCCAGAT +
Preference number: 1 (lower is better)
Translates to: LVKDVVLHSSCYFRD*MISSSWSHAKSHPD
Trigger: ATCTGGGTGAGATTTTGCATGTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCAACTGCTATGTAAAACCACATCCTTGACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 90 bp TCGCAACTACGGACAGAAGTCTCTTTTGCTTGTGATTTGCACAGTTaGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGG +
Preference number: 1 (lower is better)
Translates to: SQLRTEVSFACDLHS*FCLPQSNNGKYIPR
Trigger: CCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAACTGTGCAAATCACAAGCAAAAGAGACTTCTGTCCGTAGTTGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 90 bp CAAAAGGGAATGGTAGAACCAGAATTACTAAGTACGGCATCAGTGTaGATGTGGGGGAAATTTGTGTATAACTTGCTTTGTTCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: QKGMVEPELLSTASV*MWGKFVYNLLCSAE
Trigger: CTCAGCAGAACAAAGCAAGTTATACACAAATTTCCCCCACATTCACACTGATGCCGTACTTAGTAATTCTGGTTCTACCATTCCCTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 90 bp CAACAATGGGAAATATATTCCAAGGGAACTGTGAAATGGGTCCTTTaGCTCTGTGCCCATTTCTTCAAAAGCCAAAGACTGAATTCTGAA +
Preference number: 1 (lower is better)
Translates to: QQWEIYSKGTVKWVL*LCAHFFKSQRLNSE
Trigger: TTCAGAATTCAGTCTTTGGCTTTTGAAGAAATGGGCACAGAGCCAAAGGACCCATTTCACAGTTCCCTTGGAATATATTTCCCATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR GCA 90 bp CAGTTGCTATTTCCGGGACTGAATGATTTCTTCCTCTTGGTCACATaGAAAATCTCACCCAGATGTAATGTGATAAACAAACAGTTTACC +
Preference number: 1 (lower is better)
Translates to: QLLFPGLNDFFLLVT*KISPRCNVINKQFT
Trigger: GGTAAACTGTTTGTTTATCACATTACATCTGGGTGAGATTTTGCATGTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 90 bp TATGCAGAAACCTCCTCAACTTTAATTTGTAGTCAGCTATGGCAATaGAACACATTTTTCATAGGGAACTTTGGATGGATTCTCTGGTGC +
Preference number: 1 (lower is better)
Translates to: YAETSSTLICSQLWQ*NTFFIGNFGWILWC
Trigger: GCACCAGAGAATCCATCCAAAGTTCCCTATGAAAAATGTGTTCCATTGCCATAGCTGACTACAAATTAAAGTTGAGGAGGTTTCTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGAAGTGCCGACCTACCTaGCAGCCTTCCCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: GPRREERAPLDTVHNVTMKCRPT*QPSLSS
Trigger: GGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGT +
Preference number: 2 (lower is better)
Translates to: HVFTRCCGPRREERAPLDSRPKG*VGALHC
Trigger: ACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCA +
Preference number: 2 (lower is better)
Translates to: APPPQPSLKTLVALWRYPCLGSH*CTAARP
Trigger: TGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGTTTACACGCTGTTGTaGGCCCAGGAGGGAAGAGCG +
Preference number: 2 (lower is better)
Translates to: EREKSQNQESAPFPALPPVYTLL*AQEGRA
Trigger: CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAAC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CAA 90 bp ATACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: IQSTMSPWPVAPRVE*GHSIVQVPTYLPAF
Trigger: GAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CAA 90 bp TCTGGATACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SGYSPQCHHGQSPQG*SWGTPLSKCRPTCQ
Trigger: CTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGAAACGAGGCTCTGCTaGGCAGGCACAGAACATGTG +
Preference number: 2 (lower is better)
Translates to: EREKSQNQESAPFPALPPETRLC*AGTEHV
Trigger: CACATGTTCTGTGCCTGCTCAGCAGAGCCTCGTTTC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCA +
Preference number: 2 (lower is better)
Translates to: REKSQNQESAPFPALPPKCLGSH*CTAARP
Trigger: TGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACTCCCAACAAGTACATaGGCCCTTCTGTCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: EREKSQNQESAPFPALPPLPTST*ALLSPV
Trigger: CACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRPQGLS*GTPLSK
Trigger: CTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGT +
Preference number: 2 (lower is better)
Translates to: FRIQLSALRTGGWSILQRSRPKG*VGALHC
Trigger: ACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAAAGTGCCGACCTACCTaGCAGCCTTCCCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: REKSQNQESAPFPALPPKKCRPT*QPSLSS
Trigger: GGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCACTCCATTGTCCAAGTaGCGACCTACCTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSTPLSK*RPTCQP
Trigger: AGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGCAGTTTACTTCCCATaGGCAGAACTCCGGTGCGTG +
Preference number: 2 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAAVYFP*AELRCV
Trigger: CACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCTCCCAACAAGTACATaGGCCCTTCTGTCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRALPTST*ALLSPV
Trigger: CACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAAGAGGAGGGGGAGAGTaGGTGCTGAAAGCAGAAACG +
Preference number: 2 (lower is better)
Translates to: REKSQNQESAPFPALPPKRGGGE*VLKAET
Trigger: CGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR GCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCTGTCCCCAGTGGCCTaGTGCAGTTTACTTCCCATG +
Preference number: 2 (lower is better)
Translates to: ASQWLLLGYSCLPSELVALSPVA*CSLLPM
Trigger: CATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAACTCCATTGTCCAAGTaGCGACCTACCTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: REKSQNQESAPFPALPPKTPLSK*RPTCQP
Trigger: AGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCCCTTCTGTCCCCAGTaGCCTGCTGCAGTTTACTTC +
Preference number: 2 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFPFCPQ*PAAVYF
Trigger: GAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: QRSPLMAASILKLRPGTWPQGLS*GTPLSK
Trigger: CTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTT +
Preference number: 2 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFSTMSP*PVAPRV
Trigger: AACCCTTGGGGCGACTGGCCATGGTGACATTGTGGA...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAACAGAAACAAATGTCTaGGATCCCACTGATGCACAG +
Preference number: 2 (lower is better)
Translates to: EREKSQNQESAPFPALPPTETNV*DPTDAQ
Trigger: CTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAGTTCAGGCACAGTCCTaGTGGTGGTCTGTTTGTAAC +
Preference number: 2 (lower is better)
Translates to: FRIQLSALRTGGWSILQRVQAQS*WWSVCN
Trigger: GTTACAAACAGACCACCACCAGGACTGTGCCTGAAC...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTAAAACTAGCTGGGTATaGTGGCGGGCACCTGTAATT +
Preference number: 2 (lower is better)
Translates to: APPPQPSLKTLVALWRYPKTSWV*WRAPVI
Trigger: AATTACAGGTGCCCGCCACCATACCCAGCTAGTTTT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTTAATAAGGCTCCACTaGGAGGGAGAAATCCCAGAA +
Preference number: 2 (lower is better)
Translates to: APPPQPSLKTLVALWRYPLIRLH*EGEIPE
Trigger: TTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAAGAGGAGGGGGAGAGTaGGTGCTGAAAGCAGAAACG +
Preference number: 2 (lower is better)
Translates to: QIFVAGKLTLMALATTDRRGGGE*VLKAET
Trigger: CGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTACAGGAGCTAAGTCTTaGACTGGGGGTTACACAGCA +
Preference number: 2 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFTGAKS*TGGYTA
Trigger: TGCTGTGTAACCCCCAGTTCAAGACTTAGCTCCTGT...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCTGTCCCCAGTGGCCTaGTGCAGTTTACTTCCCATG +
Preference number: 2 (lower is better)
Translates to: DSAEQQLCSALGREVLIMLSPVA*CSLLPM
Trigger: CATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAGTCCAGAGCTACAAATaGACCCATGTGGAAGAGATT +
Preference number: 2 (lower is better)
Translates to: FRIQLSALRTGGWSILQRVQSYK*THVEEI
Trigger: AATCTCTTCCACATGGGTGCATTTGTAGCTCTGGAC...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAACAGAAACAAATGTCTaGGATCCCACTGATGCACAG +
Preference number: 2 (lower is better)
Translates to: FRIQLSALRTGGWSILQRTETNV*DPTDAQ
Trigger: CTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAAGTCCTTTTAAATGCTaGAGGCACACACAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: REKSQNQESAPFPALPPKSPFKC*RHTQVC
Trigger: ACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CAA 90 bp GTAGAGACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTaGATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAG +
Preference number: 2 (lower is better)
Translates to: VETGPELQMHPCGRD*IQQNSNYVVPWGGK
Trigger: CTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGTCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAATGCACATCCCACTTTaGTCAGGGGAGGACGTTTCC +
Preference number: 2 (lower is better)
Translates to: QIFVAGKLTLMALATTDRMHIPL*SGEDVS
Trigger: GGAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCAT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACCTCCCAACAAGTACATaGGCCCTTCTGTCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNLPTST*ALLSPV
Trigger: CACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAG...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTT +
Preference number: 2 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNSTMSP*PVAPRV
Trigger: AACCCTTGGGGCGACTGGCCATGGTGACATTGTGGA...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAAGAGCGGGCACCTCTaGATACAGTCCACAATGTCA +
Preference number: 2 (lower is better)
Translates to: DSAEQQLCSALGREVLIMKSGHL*IQSTMS
Trigger: TGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAACAAATGCACCCATGTaGAAGAGATTTGATTCAGCA +
Preference number: 2 (lower is better)
Translates to: FRIQLSALRTGGWSILQRTNAPM*KRFDSA
Trigger: TGCTGAATCAAATCTCTTCCACATGGGTGCATTTGT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTGCGAACAGAAGGCTGTaGAATTTGTATCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFANRRL*NLYHAL
Trigger: CAGAGCATGATACAAATTCCACAGCCTTCTGTTCGC...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAGTGGAATTTGTATCATaGTCTGAAAATAGACCTACC +
Preference number: 2 (lower is better)
Translates to: FRIQLSALRTGGWSILQRVEFVS*SENRPT
Trigger: GGTAGGTCTATTTTCAGAGCATGATACAAATTCCAC...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTTTTCATAGGGAACTTTaGATGGATTCTCTGGTGCTA +
Preference number: 2 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFFHREL*MDSLVL
Trigger: TAGCACCAGAGAATCCATCCAAAGTTCCCTATGAAA...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTATTTGTAGTCAGCTATaGCAATGGAACACATTTTTC +
Preference number: 2 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAICSQL*QWNTFF
Trigger: GAAAAATGTGTTCCATTGCCATAGCTGACTACAAAT...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGCGAACAGAAGGCTGTaGAATTTGTATCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: QIFVAGKLTLMALATTDRANRRL*NLYHAL
Trigger: CAGAGCATGATACAAATTCCACAGCCTTCTGTTCGC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTTGCCCTCCGAACTGGTaGCTGGAGTATCCTCCAGCG +
Preference number: 2 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFCPPNW*LEYPPA
Trigger: CGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCA...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CAA 90 bp TATAACTCCCAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTaGAGACCCGGGACTTGGAAACCAAAGCCTTGCTGTAGTAAACAA +
Preference number: 2 (lower is better)
Translates to: YNSQRSPLMAASILK*RPGTWKPKPCCSKQ
Trigger: TTGTTTACTACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTGGGAGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCTGTCCCCAGTGGCCTaGTGCAGTTTACTTCCCATG +
Preference number: 2 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWLSPVA*CSLLPM
Trigger: CATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR GCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTATGCACATCCCACTTTaGTCAGGGGAGGACGTTTCC +
Preference number: 2 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCMHIPL*SGEDVS
Trigger: GGAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCAT...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGCAGTTTACTTCCCATaGGCAGAACTCCGGTGCGTG +
Preference number: 2 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWAVYFP*AELRCV
Trigger: CACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCCCTTCTGTCCCCAGTaGCCTGCTGCAGTTTACTTC +
Preference number: 2 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWPFCPQ*PAAVYF
Trigger: GAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAGTTTACACGCTGTTGTaGGCCCAGGAGGGAAGAGCG +
Preference number: 2 (lower is better)
Translates to: KMSPASTKKRIQWKILQKVYTLL*AQEGRA
Trigger: CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAAC...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAGAAACGAGGCTCTGCTaGGCAGGCACAGAACATGTG +
Preference number: 2 (lower is better)
Translates to: KMSPASTKKRIQWKILQKETRLC*AGTEHV
Trigger: CACATGTTCTGTGCCTGCTCAGCAGAGCCTCGTTTC...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR TCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGGGGAGAGTGAGTGCTaGAAGCAGAAACGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIGESEC*KQKRGS
Trigger: AGAGCCTCGTTTCTGCTTTCAGCACTCACTCTCCCC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAAGAGGAGGGGGAGAGTaGGTGCTGAAAGCAGAAACG +
Preference number: 2 (lower is better)
Translates to: KMSPASTKKRIQWKILQKRGGGE*VLKAET
Trigger: CGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCT...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGCAGTTTACTTCCCATaGGCAGAACTCCGGTGCGTG +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIAVYFP*AELRCV
Trigger: CACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTTGAGACCCGGGACTTaGAAACCAAAGCCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQLRPGT*KPKPCC
Trigger: ACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGAGAATGTCAAGGCTCTaGCTTAGAAGAGGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQRMSRL*LRRGPS
Trigger: AGAGGGACCTCTTCTAAGTCAGAGCCTTGACATTCT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCAGGCACAGTCCTGGTaGTGGTCTGTTTGTAACTTT +
Preference number: 2 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWQAQSW*WSVCNF
Trigger: AAAGTTACAAACAGACCACCACCAGGACTGTGCCTG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGTTCAGGCACAGTCCTaGTGGTGGTCTGTTTGTAAC +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIVQAQS*WWSVCN
Trigger: GTTACAAACAGACCACCACCAGGACTGTGCCTGAAC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCTGCTGGCCTCTCAGTaGTTGCTTTTAGGATACAGC +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYILLASQ*LLLGYS
Trigger: GCTGTATCCTAAAAGCAACCACTGAGAGGCCAGCAG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCTACCTGGAGCAAGAATaGAGACAGAAGTCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIYLEQE*RQKSVG
Trigger: GCCTACTGACTTCTGTCTCCATTCTTGCTCCAGGTA...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGTGAAATGGGTCCTTTaGCTCTGTGCCCATTTCTTC +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIVKWVL*LCAHFF
Trigger: GAAGAAATGGGCACAGAGCCAAAGGACCCATTTCAC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTATTTTAACAGCCACTaGGAGATCAGTGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQYFNSH*EISDAV
Trigger: CACAGCATCACTGATCTCTCAGTGGCTGTTAAAATA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGATGGTGATCTGCATGTaGAACTGTCTTTCTCTACAC +
Preference number: 2 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQMVICM*NCLSLH
Trigger: GTGTAGAGAAAGACAGTTTCACATGCAGATCACCAT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTTTCATAGGGAACTTTaGATGGATTCTCTGGTGCTA +
Preference number: 2 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCFHREL*MDSLVL
Trigger: TAGCACCAGAGAATCCATCCAAAGTTCCCTATGAAA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTTGGAAACCAAAGCCTTaGTGTAGTAAACAAATCAGC +
Preference number: 2 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFWKPKP*CSKQIS
Trigger: GCTGATTTGTTTACTACAGCAAGGCTTTGGTTTCCA...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGATAGGCTGTTCCCACTaGATAAGAAAATTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQIGCSH*IRKFAV
Trigger: TACAGCAAATTTTCTTATCCAGTGGGAACAGCCTAT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR GCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGACATAAAGACTCTATaGAGAAACCTCCTCAACTTT +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIDIKTL*RNLLNF
Trigger: AAAGTTGAGGAGGTTTCTGCATAGAGTCTTTATGTC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCTTGTTTAAAGCCTTATaGAGGAAAGGACACTTTCAG +
Preference number: 2 (lower is better)
Translates to: ASSVNSIRVLKGESNLYILFKAL*RKGHFQ
Trigger: CTGAAAGTGTCCTTTCCTCCATAAGGCTTTAAACAA...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 72 bp GCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTaGATACAGTCCACAATGTCACCATGGCCAGTCGCC +
Preference number: 3 (lower is better)
Translates to: AVVGPGGKSGHL*IQSTMSPWPVA
Trigger: GGCGACTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR GCA 72 bp CCCCAAGGGTTGAGTTGGGGCACTCCATTGTCCAAGTaGCGACCTACCTGCCAGCCTTCCCTTTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: PQGLSWGTPLSK*RPTCQPSLSSS
Trigger: GGAGGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 72 bp AGCGGGCACCTCTGGATACAGTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCC +
Preference number: 3 (lower is better)
Translates to: SGHLWIQSTMSP*PVAPRVELGHS
Trigger: GGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAA +
Preference number: 3 (lower is better)
Translates to: GPRREERAPLDTVHNVTMAPRVE*GHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGC...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTG +
Preference number: 3 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRQSPQG*SWGTPL
Trigger: CAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 72 bp CAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAGTGCCGACCTACCTGC +
Preference number: 3 (lower is better)
Translates to: QCHHGQSPQGLS*GTPLSKCRPTC
Trigger: GCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGAGTTGGGGCACTCCATaGTCCAAGTGCCGACCTACC +
Preference number: 3 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWSWGTP*SKCRPT
Trigger: GGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR TCA 72 bp GTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGTCCAAGTGCCGACCTA +
Preference number: 3 (lower is better)
Translates to: VHNVTMASRPKG*VGALHCPSADL
Trigger: TAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 72 bp CTGAGCAGGCACAGAACATGTGTTTACACGCTGTTGTaGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAC +
Preference number: 3 (lower is better)
Translates to: LSRHRTCVYTLL*AQEGRAGTSGY
Trigger: GTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAA +
Preference number: 3 (lower is better)
Translates to: REKSQNQESAPFPALPPKAPRVE*GHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 72 bp TCCTCCCAACAAGTACATGGGCCCTTCTGTCCCCAGTaGCCTGCTGCAGTTTACTTCCCATGGGCAGAACTC +
Preference number: 3 (lower is better)
Translates to: SSQQVHGPFCPQ*PAAVYFPWAEL
Trigger: GAGTTCTGCCCATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAA +
Preference number: 3 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGAPRVE*GHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTG +
Preference number: 3 (lower is better)
Translates to: QRSPLMAASILKLRPGTWQSPQG*SWGTPL
Trigger: CAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTG +
Preference number: 3 (lower is better)
Translates to: QIFVAGKLTLMALATTDRQSPQG*SWGTPL
Trigger: CAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGTGTGTTTACACGCTGTaGTGGGCCCAGGAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: QRSPLMAASILKLRPGTWCVYTL*WAQEGR
Trigger: TCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACA...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTATCTCCTCAGTGTCTaGTCCTTAGGTAGAGACAGG +
Preference number: 3 (lower is better)
Translates to: APPPQPSLKTLVALWRYPYLLSV*SLGRDR
Trigger: CCTGTCTCTACCTAAGGACAAGACACTGAGGAGATA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCATGCACATCCCACTTaGCTCAGGGGAGGACGTTTC +
Preference number: 3 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFHAHPT*LRGGRF
Trigger: GAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCATG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 72 bp GGAAAATCTTACAGAAACAAATGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCAGAAGAGGAGGGGGAG +
Preference number: 3 (lower is better)
Translates to: GKSYRNKCLGSH*CTAARPEEEGE
Trigger: CTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGTAAGATTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 72 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTaGAGTATCCTCCAGCGAACAGAAGGCTGTGGAATT +
Preference number: 3 (lower is better)
Translates to: FRIQLSALRTGG*SILQRTEGCGI
Trigger: AATTCCACAGCCTTCTGTTCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGTTGAGACCCGGGACTaGGAAACCAAAGCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: DSAEQQLCSALGREVLIMVETRD*ETKALL
Trigger: CAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAAC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR TCA 72 bp CACTCTGTCCCCGTCATGACAACAGGAGCTAAGTCTTaGACTGGGGGTTACACAGCACTCTTAAGTAGGCGT +
Preference number: 3 (lower is better)
Translates to: HSVPVMTTGAKS*TGGYTALLSRR
Trigger: ACGCCTACTTAAGAGTGCTGTGTAACCCCCAGTTCAAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTAATGTTTCTCAGCTCTaGAAGAAACCCCTGACAGAA +
Preference number: 3 (lower is better)
Translates to: ASQWLLLGYSCLPSELVANVSQL*KKPLTE
Trigger: TTCTGTCAGGGGTTTCTTCAAGAGCTGAGAAACATT...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 72 bp AGCCTTAACTACCATTCCCTCACTCTGTCCCCGTCATaGCAACAGGAGCTAAGTCTTGAACTGGGGGTTACA +
Preference number: 3 (lower is better)
Translates to: SLNYHSLTLSPS*QQELSLELGVT
Trigger: TGTAACCCCCAGTTCAAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGTGAGGGAATGGTAGTTAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTCTTTTGCTTGTGATTaGCACAGTTGGTTTTGTTTG +
Preference number: 3 (lower is better)
Translates to: APPPQPSLKTLVALWRYPSFACD*HSWFCL
Trigger: CAAACAAAACCAACTGTGCAAATCACAAGCAAAAGA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 72 bp CCCAGCTCTAAGTCTTGGATATTAATAAGGCTCCACTaGGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCC +
Preference number: 3 (lower is better)
Translates to: PSSKSWILIRLH*EGEIPESRERS
Trigger: GGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAATATCCAAGACTTAGAGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAAGAAGGCTGTGGAATTaGTATCATGCTCTGAAAATA +
Preference number: 3 (lower is better)
Translates to: FRIQLSALRTGGWSILQRRRLWN*YHALKI
Trigger: TATTTTCAGAGCATGATACAAATTCCACAGCCTTCT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTAGTTGGGGCACTCCATaGTCCAAGTGCCGACCTACC +
Preference number: 3 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFSWGTP*SKCRPT
Trigger: GGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 72 bp CAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTaGAATGGGTCCTTTGGCTCTGTGCCCATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: QSNNGKYIPREL*NGSFGSVPISS
Trigger: TGAAGAAATGGGCACAGAGCCAAAGGACCCATTTCACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACATTGTTTACCCTCATaGGAGATGTTTGTTAGAGAA +
Preference number: 3 (lower is better)
Translates to: QIFVAGKLTLMALATTDRHCLPS*EMFVRE
Trigger: TTCTCTAACAAACATCTCCAATGAGGGTAAACAATG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 72 bp GAAATATATTCCAAGGGAACTGTGAAATGGGTCCTTTaGCTCTGTGCCCATTTCTTCAAAAGCCAAAGACTG +
Preference number: 3 (lower is better)
Translates to: EIYSKGTVKWVL*LCAHFFKSQRL
Trigger: CAGTCTTTGGCTTTTGAAGAAATGGGCACAGAGCCAAAGGACCCATTTCACAGTTCCCTTGGAATATATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 72 bp CAACAATGGGAAATATATTCCAAGGGAACTGTGAAATaGGTCCTTTGGCTCTGTGCCCATTTCTTCAAAAGC +
Preference number: 3 (lower is better)
Translates to: QQWEIYSKGTVK*VLWLCAHFFKS
Trigger: GCTTTTGAAGAAATGGGCACAGAGCCAAAGGACCCATTTCACAGTTCCCTTGGAATATATTTCCCATTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCTGGCCTCTCAGTGGTaGCTTTTAGGATACAGCTGT +
Preference number: 3 (lower is better)
Translates to: ASSVNSIRVLKGESNLYILASQW*LLGYSC
Trigger: ACAGCTGTATCCTAAAAGCAACCACTGAGAGGCCAG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTGTGAAATGGGTCCTTaGGCTCTGTGCCCATTTCTT +
Preference number: 3 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQCEMGP*ALCPFL
Trigger: AAGAAATGGGCACAGAGCCAAAGGACCCATTTCACA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 72 bp TGGTTTTACATAGCAGTTGCTATTTCCGGGACTGAATaGTTTCTTCCTCTTGGTCACATGCAAAATCTCACC +
Preference number: 3 (lower is better)
Translates to: WFYIAVAISGTE*FLPLGHMQNLT
Trigger: GGTGAGATTTTGCATGTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCAACTGCTATGTAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR GCA 72 bp TCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTaGATTTCCTATGCAAATACAAGAACTGAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: SKCHLLRYLRMA*ISYANTRTEAA
Trigger: TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
3UTR CCA 72 bp TTCTCTCAATACAAAATTGTTCAGGCACAGTCCTGGTaGTGGTCTGTTTGTAACTTTAGTGTATCTGGGACT +
Preference number: 3 (lower is better)
Translates to: FSQYKIVQAQSW*WSVCNFSVSGT
Trigger: AGTCCCAGATACACTAAAGTTACAAACAGACCACCACCAGGACTGTGCCTGAACAATTTTGTATTGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CCA 72 bp TTTGCACAGTTGGTTTTGTTTGCCTCAGTCCAACAATaGGAAATATATTCCAAGGGAACTGTGAAATGGGTC +
Preference number: 3 (lower is better)
Translates to: FAQLVLFASVQQ*EIYSKGTVKWV
Trigger: GACCCATTTCACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAACTGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 72 bp CGGACAGAAGTCTCTTTTGCTTGTGATTTGCACAGTTaGTTTTGTTTGCCTCAGTCCAACAATGGGAAATAT +
Preference number: 3 (lower is better)
Translates to: RTEVSFACDLHS*FCLPQSNNGKY
Trigger: ATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAACTGTGCAAATCACAAGCAAAAGAGACTTCTGTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTGCCTCTATCTTAAAGTaGAGACCCGGGACTTGGAAA +
Preference number: 3 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFASILK*RPGTWK
Trigger: TTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGC...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGGTTCACCTTCAAGGATaGTGTCTTGGGGAGTATTTG +
Preference number: 3 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQVHLQG*CLGEYL
Trigger: CAAATACTCCCCAAGACACAATCCTTGAAGGTGAAC...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGGTCCCTCTAAAATATaGCTGCAGGCTCAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIGPSKI*LQAQRR
Trigger: TCTTCTCTGAGCCTGCAGCAATATTTTAGAGGGACC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR TCA 72 bp GATGTGGTTTTACATAGCAGTTGCTATTTCCGGGACTaGATGATTTCTTCCTCTTGGTCACATGCAAAATCT +
Preference number: 3 (lower is better)
Translates to: DVVLHSSCYFRD*MISSSWSHAKS
Trigger: AGATTTTGCATGTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCAACTGCTATGTAAAACCACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CCA 72 bp TTATTCTCTCAATACAAAATTGTTCAGGCACAGTCCTaGTGGTGGTCTGTTTGTAACTTTAGTGTATCTGGG +
Preference number: 3 (lower is better)
Translates to: LFSQYKIVQAQS*WWSVCNFSVSG
Trigger: CCCAGATACACTAAAGTTACAAACAGACCACCACCAGGACTGTGCCTGAACAATTTTGTATTGAGAGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGAGAAGGCTGTGGAATTaGTATCATGCTCTGAAAATA +
Preference number: 3 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQRRLWN*YHALKI
Trigger: TATTTTCAGAGCATGATACAAATTCCACAGCCTTCT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACCCGCCGCTCGGAACTaGCCCAGGATGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPPAARN*PRMRLC
Trigger: GCAGAGCCTCATCCTGGGGCAGTTCCGAGCGGCGGG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCCCAGGGCTGCACGCTaGAGCCGGCCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAPRAAR*SRPRQR
Trigger: CCTTTGCCGTGGCCGGCTGCAGCGTGCAGCCCTGGG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGAGGCTCTCCCAGGGCTaGACGCTGCAGCCGGCCACG +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRARLSQG*TLQPAT
Trigger: CGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCT...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCCTGGGCCTCCCGCGTaGTCAGCTTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPPGPPA*SASAPG
Trigger: CCCTGGAGCTGAAGCTGAGCACGCGGGAGGCCCAGG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCGCTGCTGGTGGAGCTaGGGGATCGCATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPRCWWS*GIASAA
Trigger: AGCAGCGGATGCGATCCCTCAGCTCCACCAGCAGCG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCCTGGGCCTCCCGCGTaGTCAGCTTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAPGPPA*SASAPG
Trigger: CCCTGGAGCTGAAGCTGAGCACGCGGGAGGCCCAGG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAACCGCGGCCGCCATCATaGGCCCGCTCCCTACTTGGG +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKPRPPS*ARSLLG
Trigger: CCCAAGTAGGGAGCGGGCGCATGATGGCGGCCGCGG...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCGCCCGCTCCCTACTTaGGAGGAGGAGTACGCGCGA +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPRPLPT*EEEYAR
Trigger: TCGCGCGTACTCCTCCTCCCAAGTAGGGAGCGGGCG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTCGCCGTCGCACGTCTaGAAGAGGCGCCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDSPSHV*KRRRIL
Trigger: GAGGATGCGGCGCCTCTTCCAGACGTGCGACGGCGA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGTGCCGTCCAGCTTCATaGGCAGGGCCTTGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQCRPAS*AGPWQR
Trigger: ACGCTGCCAAGGCCCTGCTCATGAAGCTGGACGGCA...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGTGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCA +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMCLGSH*CTAARP
Trigger: TGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACA...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACCCAGGATGAGGCTCTaGTCACTCTCTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPPRMRL*SLSASA
Trigger: GGCGCTGGCAGAGAGTGAGCAGAGCCTCATCCTGGG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACCCAGGGCTGCACGCTaGAGCCGGCCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGPRAAR*SRPRQR
Trigger: CCTTTGCCGTGGCCGGCTGCAGCGTGCAGCCCTGGG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGATGGGCAGCCTCACTaGTGGCCTCTCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMDGQPH*WPLSGC
Trigger: GCAACCACTGAGAGGCCAGCAGTGAGGCTGCCCATC...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCTGCTGGACGTGTCGCTaGTGCTGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSCWTCR*CCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCA...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGCTGCAGGAGGCTCGGTaGCGCGGCGCGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGELQEAR*RGALAA
Trigger: AGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAG...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGGCTGGAGGGACCTGTaGCCTGCACGCTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQGWRDL*PARSVV
Trigger: GACTACAGAGCGTGCAGGCCACAGGTCCCTCCAGCC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCCTCATGCTCTCTCATaGGGTGGGACTGCTCGCACT +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMPHALS*GGTART
Trigger: AGTGCGAGCAGTCCCACCTCATGAGAGAGCATGAGG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTGCCGTCCAGCTTCATaGGCAGGGCCTTGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTCRPAS*AGPWQR
Trigger: ACGCTGCCAAGGCCCTGCTCATGAAGCTGGACGGCA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCGCTGCACGTTGTCCTaGGTTCGGCTAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQRCTLS*VRLGTE
Trigger: CTCTGTCCCTAGCCGAACTCAGGACAACGTGCAGCG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGGAGCCGGAGCGGAGCTaGACTTCACGCCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWEPERS*TSRRSF
Trigger: GAAACTTCGGCGTGAAGTGCAGCTCCGCTCCGGCTC...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCGGCCACGGAGAGGCTaGAGCTGCTCTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRARPRRG*SCSSSC
Trigger: GCAGGAAGAAGAGCAGCTGCAGCCTCTCCGTGGCCG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACACTGCTCGCTGTACTaGAAGGCCAGCCTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRHCSLY*KASLSA
Trigger: AGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGGCTCTGCTCACTCTCTaGCAGCGCCAGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWALLTL*QRQEEF
Trigger: GAACTCCTCCTGGCGCTGGCAGAGAGTGAGCAGAGC...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACCCGCCGCTCGGAACTaGCCCAGGATGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGPAARN*PRMRLC
Trigger: GCAGAGCCTCATCCTGGGGCAGTTCCGAGCGGCGGG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGATCCGCTGCTCCTTCTaGTCCTCCACCTCGGACTTC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMIRCSF*SSTSDF
Trigger: GAAGTCCGAGGTGGAGGAGCAGAAGGAGCAGCGGAT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTGCCCTCCGAACTGGTaGCTGGAGTATCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDCPPNW*LEYPPA
Trigger: CGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTGCACATCCGGGCTCTaGAGGTCCCTGGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRACTSGL*RSLAPE
Trigger: CTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
3UTR CAA 72 bp CTGCTGAGCAGGCACAGAACATGTGTTTACACGCTGTaGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLSRHRTCVYTL*WAQEGRAGTSG
Trigger: TCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCCTCATGCTCTCTCATaGGGTGGGACTGCTCGCACT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPPHALS*GGTART
Trigger: AGTGCGAGCAGTCCCACCTCATGAGAGAGCATGAGG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCGTGTTGGCTCTGGCTaGGTTCTGATCGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMRVGSG*VLIAVL
Trigger: CAGAACTGCGATCAGAACTCAGCCAGAGCCAACACG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTTTCGAGAGTCCTCGTTaGCCTCGTGTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPFESPR*PRVGSG
Trigger: GCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAA...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTGGAGCAGTCCTGAAGTaGGTGGGCCAGGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPGAVLK*VGQVFS
Trigger: GCTGAACACCTGGCCCACTCACTTCAGGACTGCTCC...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGAGCAGTCCTGAAGTaGGTGGGCCAGGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAGAVLK*VGQVFS
Trigger: GCTGAACACCTGGCCCACTCACTTCAGGACTGCTCC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACCAGCATGGTCAGCTTaGCCGCAGCCCTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRPAWSA*PQPCHS
Trigger: AGAATGACAGGGCTGCGGTCAAGCTGACCATGCTGG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGT +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWSRPKG*VGALHC
Trigger: ACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPSRPKG*VGALHC
Trigger: ACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGAGAGGAGGGGGAGAGTaGGTGCTGAAAGCAGAAACG +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMRGGGE*VLKAET
Trigger: CGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCGGAGAGGCTGCAGCTaGTCTTCTTCCTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSRRGCS*SSSCRR
Trigger: TCTGCGGCAGGAAGAAGAGCAGCTGCAGCCTCTCCG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGTGAGCTGCTCAATGTaGTTGTCCACCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRVSCSM*LSTSAT
Trigger: CGTGGCCGAGGTGGACAAGCACATTGAGCAGCTCAC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAATAGCCAGGTCACAGTaGTCGCTGGCTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPIARSQ*SLAVVS
Trigger: GCTCACCACAGCCAGCGAGCACTGTGACCTGGCTAT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCACTGCTCGCTGTACTaGAAGGCCAGCCTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSHCSLY*KASLSA
Trigger: AGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAACCCAGGATGAGGCTCTaGTCACTCTCTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKPRMRL*SLSASA
Trigger: GGCGCTGGCAGAGAGTGAGCAGAGCCTCATCCTGGG...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGATGCCAGGTTTGTCTTTaGTGCCGCTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRCQVCL*CRCWWS
Trigger: GCTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCA...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTAAGTGCCGACCTACCTaGCAGCCTTCCCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPKCRPT*QPSLSS
Trigger: GGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAAGGGCTGACTGGCTCTaGACATCCGGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKRADWL*TSGLWR
Trigger: CCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCTGGTTGTGCTGGTGTaGCTGTTGGAGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLVVLV*LLEERL
Trigger: GAGCCTTTCCTCCAACAGCCACACCAGCACAACCAG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCGCAACTACTGGCTGTaGAGCTGGTTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMRNYWL*SWLCWC
Trigger: ACACCAGCACAACCAGCTCCACAGCCAGTAGTTGCG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCTCCCAACAAGTACATaGGCCCTTCTGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLPTST*ALLSPV
Trigger: CACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGTTTACACGCTGTTGTaGGCCCAGGAGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRVYTLL*AQEGRA
Trigger: CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAAC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTGCCCTCCGAACTGGTaGCTGGAGTATCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTCPPNW*LEYPPA
Trigger: CGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGTCTGCCCTCCGAACTaGTGGCTGGAGTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPVCPPN*WLEYPP
Trigger: TGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGAC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTGGGCAGCCTCACTGCTaGCCTCTCAGTGGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPGQPHC*PLSGCF
Trigger: AAAGCAACCACTGAGAGGCCAGCAGTGAGGCTGCCC...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGTACTCGAGCAGCTTCTaGAGGGCTGACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQYSSSF*RADWLC
Trigger: GCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTA...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTTCGAGAGTCCTCGTTaGCCTCGTGTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAFESPR*PRVGSG
Trigger: GCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTTCGAGAGTCCTCGTTaGCCTCGTGTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTFESPR*PRVGSG
Trigger: GCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTGCTCGCTGGCTGTGGTaGGCTGCTCAATGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTARWLW*AAQCAC
Trigger: ACAAGCACATTGAGCAGCTCACCACAGCCAGCGAGC...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGCTCGCTGGCTGTGGTaGGCTGCTCAATGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAARWLW*AAQCAC
Trigger: ACAAGCACATTGAGCAGCTCACCACAGCCAGCGAGC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCGCTGCTGGTGGAGCTaGGGGATCGCATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWRCWWS*GIASAA
Trigger: AGCAGCGGATGCGATCCCTCAGCTCCACCAGCAGCG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGCGCTGCTGGTGGAGCTaGGGGATCGCATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRRCWWS*GIASAA
Trigger: AGCAGCGGATGCGATCCCTCAGCTCCACCAGCAGCG...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCAGAACTCCGGTGCGTaGGTGCTGATTAAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMQNSGA*VLIKAK
Trigger: CTTCGCTTTAATCAGCACTCACGCACCGGAGTTCTG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCAGTCGCCCCAAGGGTTaGGTTGGGGCACTCCATTGT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSSRPKG*VGALHC
Trigger: ACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAGAGGAGGGGGAGAGTaGGTGCTGAAAGCAGAAACG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDRGGGE*VLKAET
Trigger: CGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTGGTAAGCTCACACTaGTGGCACTCGCAACTACGG +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLVSSH*WHSQLR
Trigger: CCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACTCATGAGGTGGGACTaGTCGCACTGTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRLMRWD*SHCALA
Trigger: GGCCAAGGCACAGTGCGAGCAGTCCCACCTCATGAG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCTGGCTGTGGTGAGCTaGTCAATGTGCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLAVVS*SMCLST
Trigger: GGTGGACAAGCACATTGAGCAGCTCACCACAGCCAG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTGGCTGTGGTGAGCTaGTCAATGTGCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLAVVS*SMCLST
Trigger: GGTGGACAAGCACATTGAGCAGCTCACCACAGCCAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGATGTCATTGCTGCTGCTaGTTGTGCTCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRCHCCC*LCSAPQ
Trigger: CTGGGGAGCTGAGCACAAGCAGCAGCAGCAATGACA...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCCCAGGGCTGCACGCTaGAGCCGGCCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGPRAAR*SRPRQR
Trigger: CCTTTGCCGTGGCCGGCTGCAGCGTGCAGCCCTGGG...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGAGGCTCTCCCAGGGCTaGACGCTGCAGCCGGCCACG +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGRLSQG*TLQPAT
Trigger: CGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCT...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCTGCCAGGTTTGTCTTTaGTGCCGCTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSCQVCL*CRCWWS
Trigger: GCTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCA...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCTGTCCCCAGTGGCCTaGTGCAGTTTACTTCCCATG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWLSPVA*CSLLPM
Trigger: CATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTGTCCCCAGTGGCCTaGTGCAGTTTACTTCCCATG +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLSPVA*CSLLPM
Trigger: CATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCCCCCATTACCAGGATaGAGGGCACTTCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAPPLPG*RALPST
Trigger: CGTGCTGGGAAGTGCCCTCCATCCTGGTAATGGGGG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTTCCGCAATGACGCTGTaGAGCTCTGTGATGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPSAMTL*SSVMRS
Trigger: GGAACGCATCACAGAGCTCCACAGCGTCATTGCGGA...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGACCTCGTGTTGGCTCTaGCTGAGTTCTGATCGCAGT +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMTSCWL*LSSDRS
Trigger: ACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGGGCTGGAGGGACCTGTaGCCTGCACGCTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVGWRDL*PARSVV
Trigger: GACTACAGAGCGTGCAGGCCACAGGTCCCTCCAGCC...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTGCTGGTGTGGCTGTTaGAGGAAAGGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTCWCGC*RKGSPR
Trigger: CCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACTGGTTGTGCTGGTGTaGCTGTTGGAGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPLVVLV*LLEERL
Trigger: GAGCCTTTCCTCCAACAGCCACACCAGCACAACCAG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCGCAACTACTGGCTGTaGAGCTGGTTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDRNYWL*SWLCWC
Trigger: ACACCAGCACAACCAGCTCCACAGCCAGTAGTTGCG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCTGAGAGGATCGATGTaGATGCTTTCCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLRGSM*MLSSSS
Trigger: GCTGGAGCTGGAAAGCATCCACATCGATCCTCTCAG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATGCAGTTTACTTCCCATaGGCAGAACTCCGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDAVYFP*AELRCV
Trigger: CACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGC...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCCCTTCTGTCCCCAGTaGCCTGCTGCAGTTTACTTC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPPFCPQ*PAAVYF
Trigger: GAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDSTMSP*PVAPRV
Trigger: AACCCTTGGGGCGACTGGCCATGGTGACATTGTGGA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTCCGAACTGGTGGCTaGAGTATCCTCCAGCGAACA +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLRTGG*SILQRT
Trigger: TGTTCGCTGGAGGATACTCCAGCCACCAGTTCGGAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATGTTTCGTTTTGGAGATaGGCAGCCTCACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDVSFWR*AASLLA
Trigger: GGCCAGCAGTGAGGCTGCCCATCTCCAAAACGAAAC...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CAA 72 bp ACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAAGTGCCGACCTACCTG +
Preference number: 4 (lower is better)
Translates to: TMSPWPVAPRVE*GHSIVQVPTYL
Trigger: CAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
3UTR CAA 72 bp AGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTGTCCAAGTGCCGACCT +
Preference number: 4 (lower is better)
Translates to: SPQCHHGQSPQG*SWGTPLSKCRP
Trigger: AGGTCGGCACTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCGCTGTGGAGCTCTGTaGTGCGTTCCTCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRARCGAL*CVPHSE
Trigger: TTCGCTATGAGGAACGCATCACAGAGCTCCACAGCG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTCGCTGTGGAGCTCTGTaGTGCGTTCCTCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPRCGAL*CVPHSE
Trigger: TTCGCTATGAGGAACGCATCACAGAGCTCCACAGCG...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCGTGTTGGCTCTGGCTaGGTTCTGATCGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTRVGSG*VLIAVL
Trigger: CAGAACTGCGATCAGAACTCAGCCAGAGCCAACACG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCACCCTCTGCAGTTCTaGGTTCAGGTCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQHPLQF*VQVTAV
Trigger: AACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAATATTGGAGCAGTCCTaGAGTGAGTGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPILEQS*SEWARC
Trigger: ACACCTGGCCCACTCACTTCAGGACTGCTCCAATAT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCCAGCATGGTCAGCTTaGCCGCAGCCCTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAPAWSA*PQPCHS
Trigger: AGAATGACAGGGCTGCGGTCAAGCTGACCATGCTGG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGACGAATGGCGTTGGTaGACTCCGCAGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVADEWRW*TPQPAH
Trigger: ATGAGCTGGCTGCGGAGTTCACCAACGCCATTCGTC...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCAGAACTCCGGTGCGTaGGTGCTGATTAAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDQNSGA*VLIKAK
Trigger: CTTCGCTTTAATCAGCACTCACGCACCGGAGTTCTG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCAGAGGAGGGGGAGAGTaGGTGCTGAAAGCAGAAACG +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSRGGGE*VLKAET
Trigger: CGTTTCTGCTTTCAGCACTCACTCTCCCCCTCCTCT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGCLGSH*CTAARP
Trigger: TGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGGAGCCGGAGCGGAGCTaGACTTCACGCCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVEPERS*TSRRSF
Trigger: GAAACTTCGGCGTGAAGTGCAGCTCCGCTCCGGCTC...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGACGAGCCATTGCTaGAGGAGGCTCGGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGRTSHC*RRLGGA
Trigger: CGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCG...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGAGGCTCAATATCCACTaGTTGGTCCCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMRLNIH*LVPSAT
Trigger: TGTGGCAGAAGGGACCAAGCAGTGGATATTGAGCCT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACTCATGAGGTGGGACTaGTCGCACTGTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGLMRWD*SHCALA
Trigger: GGCCAAGGCACAGTGCGAGCAGTCCCACCTCATGAG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGTGGGAATGTCATTGCTaGTGCTGCTTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMWECHC*CCLCSA
Trigger: AGCTGAGCACAAGCAGCAGCAGCAATGACATTCCCA...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGCCCAGGATGAGGCTCTaGTCACTCTCTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEPRMRL*SLSASA
Trigger: GGCGCTGGCAGAGAGTGAGCAGAGCCTCATCCTGGG...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACCCGCCGCTCGGAACTaGCCCAGGATGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRPAARN*PRMRLC
Trigger: GCAGAGCCTCATCCTGGGGCAGTTCCGAGCGGCGGG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCCCGCCGCTCGGAACTaGCCCAGGATGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGPAARN*PRMRLC
Trigger: GCAGAGCCTCATCCTGGGGCAGTTCCGAGCGGCGGG...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGGAGGATCGATGTGGATaGTTTCCAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWEDRCG*FPAPAW
Trigger: CCATGCTGGAGCTGGAAAGCATCCACATCGATCCTC...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACCTGGGCCTCCCGCGTaGTCAGCTTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRPGPPA*SASAPG
Trigger: CCCTGGAGCTGAAGCTGAGCACGCGGGAGGCCCAGG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCCTGGGCCTCCCGCGTaGTCAGCTTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGPGPPA*SASAPG
Trigger: CCCTGGAGCTGAAGCTGAGCACGCGGGAGGCCCAGG...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGAGGGATCGCATCCGCTaGTCCTTCTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWRDRIR*SFCSST
Trigger: GGTGGAGGAGCAGAAGGAGCAGCGGATGCGATCCCT...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCATCAGCACACTCCTTaGCAGGTTTGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMHQHTP*QVCLCC
Trigger: GCAGCAAAGACAAACCTGGCAAGGAGTGTGCTGATG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGGCCAGGGCTGCTGAATaGAGCTCACTCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRARAAE*SSLSSA
Trigger: GGCCGAGCTGAGTGAGCTCCATTCAGCAGCCCTGGC...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAGTGTCGTTCGCTCCTaGACATCCTCATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRSVVRS*TSSCSL
Trigger: GAGAGAGCATGAGGATGTCCAGGAGCGAACGACACT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAGTGTCGTTCGCTCCTaGACATCCTCATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDSVVRS*TSSCSL
Trigger: GAGAGAGCATGAGGATGTCCAGGAGCGAACGACACT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCTCCGCAATGACGCTGTaGAGCTCTGTGATGCGTTCC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSSAMTL*SSVMRS
Trigger: GGAACGCATCACAGAGCTCCACAGCGTCATTGCGGA...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTACCTCGTGTTGGCTCTaGCTGAGTTCTGATCGCAGT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPTSCWL*LSSDRS
Trigger: ACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCAGCAATCTTGGCGATaGGAATGTCATTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMQQSWR*ECHCCC
Trigger: GCAGCAGCAATGACATTCCCATCGCCAAGATTGCTG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATGGAGCTGGTTGTGCTaGTGTGGCTGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPWSWLC*CGCWRK
Trigger: TTTCCTCCAACAGCCACACCAGCACAACCAGCTCCA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTACTGGCTGTGGAGCTaGTTGTGCTGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPYWLWS*LCWCGC
Trigger: ACAGCCACACCAGCACAACCAGCTCCACAGCCAGTA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTCGCAACTACTGGCTGTaGAGCTGGTTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPRNYWL*SWLCWC
Trigger: ACACCAGCACAACCAGCTCCACAGCCAGTAGTTGCG...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCATTGGTGTGTGGCCTaGAGTTCTCCTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPHWCVA*SSPPLA
Trigger: TGCTAGAGGAGGAGAACTCCAGGCCACACACCAATG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCATTGGTGTGTGGCCTaGAGTTCTCCTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDHWCVA*SSPPLA
Trigger: TGCTAGAGGAGGAGAACTCCAGGCCACACACCAATG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPSTMSP*PVAPRV
Trigger: AACCCTTGGGGCGACTGGCCATGGTGACATTGTGGA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGTCTGCCCTCCGAACTaGTGGCTGGAGTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAVCPPN*WLEYPP
Trigger: TGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGAC...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCTGCTGGCCTCTCAGTaGTTGCTTTTAGGATACAGC +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLLASQ*LLLGYS
Trigger: GCTGTATCCTAAAAGCAACCACTGAGAGGCCAGCAG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTGTTTCGTTTTGGAGATaGGCAGCCTCACTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPVSFWR*AASLLA
Trigger: GGCCAGCAGTGAGGCTGCCCATCTCCAAAACGAAAC...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAACTCATCTTCCTCCCTaGTGGTGGTGCCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRTHLPP*WWCLAD
Trigger: GTCTGCAAGGCACCACCATCAGGGAGGAAGATGAGT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAACTCATCTTCCTCCCTaGTGGTGGTGCCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKTHLPP*WWCLAD
Trigger: GTCTGCAAGGCACCACCATCAGGGAGGAAGATGAGT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCACCCTCTGCAGTTCTaGGTTCAGGTCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAHPLQF*VQVTAV
Trigger: AACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGATACCCCTATGCTACTaGTTTCTGAGCCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQIPLCY*FLSPGL
Trigger: CAGTCCTGGGCTCAGAAATCAGTAGCATAGGGGTAT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATATACCCCTATGCTACTaGTTTCTGAGCCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDIPLCY*FLSPGL
Trigger: CAGTCCTGGGCTCAGAAATCAGTAGCATAGGGGTAT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAATACCCCTATGCTACTaGTTTCTGAGCCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPIPLCY*FLSPGL
Trigger: CAGTCCTGGGCTCAGAAATCAGTAGCATAGGGGTAT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGATATTGGAGCAGTCCTaGAGTGAGTGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAILEQS*SEWARC
Trigger: ACACCTGGCCCACTCACTTCAGGACTGCTCCAATAT...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTGGAACTGCCCCAGGATaGGGCTCTGCTCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFGTAPG*GSAHSL
Trigger: CAGAGAGTGAGCAGAGCCTCATCCTGGGGCAGTTCC...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGGAACTGCCCCAGGATaGGGCTCTGCTCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEGTAPG*GSAHSL
Trigger: CAGAGAGTGAGCAGAGCCTCATCCTGGGGCAGTTCC...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGCTCGCTTGAGCATCTaGGTGATGTTTTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAARLSI*VMFSSP
Trigger: GGGGGATGAAAACATCACTCAGATGCTCAAGCGAGC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCAGCCCTGTCATTCTTaGGCTGCTGGATATAATCCT +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMQPCHS*AAGYNP
Trigger: AGGATTATATCCAGCAGCTCAAGAATGACAGGGCTG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACGCTGCTGGTGGAGCTaGGGGATCGCATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRRCWWS*GIASAA
Trigger: AGCAGCGGATGCGATCCCTCAGCTCCACCAGCAGCG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATTTCACTGCTCTTGGTaGGTCTCTCCAAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPFHCSW*VSPRHS
Trigger: TGAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGAAACGAGGCTCTGCTaGGCAGGCACAGAACATGTG +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAETRLC*AGTEHV
Trigger: CACATGTTCTGTGCCTGCTCAGCAGAGCCTCGTTTC...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTACTCTGTCCCCGTCATaGCAACAGGAGCTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPTLSPS*QQELSL
Trigger: AAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGAAGGGGAGGTTCTCTaGTTTTACCTGGAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMEGEVL*FYLEQE
Trigger: TTCTTGCTCCAGGTAAAATCAGAGAACCTCCCCTTC...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCTGTTCCCCAGTCCATaGCAGATTTTTGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLFPSP*QIFVAG
Trigger: ACCAGCTACAAAAATCTGTCATGGACTGGGGAACAG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAACAGGAGATGCTTCTaGAGGCCACAAGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDNRRCF*RPQVWS
Trigger: GCTCCAAACTTGTGGCCTTCAGAAGCATCTCCTGTT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGGACTGCTCGCACTGTaGCTTGGCCAATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPGLLAL*LGQFLF
Trigger: GAAAAGAAATTGGCCAAGGCACAGTGCGAGCAGTCC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGCTCATGAGGTGGGACTaGTCGCACTGTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRLMRWD*SHCALA
Trigger: GGCCAAGGCACAGTGCGAGCAGTCCCACCTCATGAG...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCTGATGGTGGTGCCTTaGAGACGGTCTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLMVVP*RRSIFL
Trigger: CAAGAAGATAGACCGTCTGCAAGGCACCACCATCAG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCTGATGGTGGTGCCTTaGAGACGGTCTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWLMVVP*RRSIFL
Trigger: CAAGAAGATAGACCGTCTGCAAGGCACCACCATCAG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACTGATGGTGGTGCCTTaGAGACGGTCTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRLMVVP*RRSIFL
Trigger: CAAGAAGATAGACCGTCTGCAAGGCACCACCATCAG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCTGAGTTCAGGTCACTaGAGTTGTCCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWLSSGH*SCPCQQ
Trigger: CTGCTGACATGGACAACTGCAGTGACCTGAACTCAG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTGAGTTCAGGTCACTaGAGTTGTCCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLSSGH*SCPCQQ
Trigger: CTGCTGACATGGACAACTGCAGTGACCTGAACTCAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAPVSTL*SSEFRS
Trigger: TGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGCGGAGAGGCTGCAGCTaGTCTTCTTCCTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRRRGCS*SSSCRR
Trigger: TCTGCGGCAGGAAGAAGAGCAGCTGCAGCCTCTCCG...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGTGAGCTGCTCAATGTaGTTGTCCACCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGVSCSM*LSTSAT
Trigger: CGTGGCCGAGGTGGACAAGCACATTGAGCAGCTCAC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAATAGCCAGGTCACAGTaGTCGCTGGCTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGIARSQ*SLAVVS
Trigger: GCTCACCACAGCCAGCGAGCACTGTGACCTGGCTAT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGTTCTTCCTCTTTGCTaGACAGCATGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAVLPLC*TAWQSG
Trigger: GCCTGACTGCCATGCTGTGCAGCAAAGAGGAAGAAC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATGTCATTGCTGCTGCTaGTTGTGCTCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKCHCCC*LCSAPQ
Trigger: CTGGGGAGCTGAGCACAAGCAGCAGCAGCAATGACA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTGAATGTCATTGCTGCTaGTGCTTGTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTECHCC*CLCSAP
Trigger: GGGAGCTGAGCACAAGCAGCAGCAGCAATGACATTC...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGTGTTCAGCCACACTaGTGGATACCCCTATGCTAC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSGVQPH*WIPLCY
Trigger: GTAGCATAGGGGTATCCAGCAGTGTGGCTGAACACC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTGGTGTTCAGCCACACTaGTGGATACCCCTATGCTAC +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTGVQPH*WIPLCY
Trigger: GTAGCATAGGGGTATCCAGCAGTGTGGCTGAACACC...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCTCCTGCATAAGCACTaGGTTTTCCAGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWLLHKH*VFQIQP
Trigger: AGGCTGGATCTGGAAAACGCAGTGCTTATGCAGGAG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAATGGCCATGAGCTCCTaGATAAGCACTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRMAMSS*ISTAFS
Trigger: GGAAAACGCAGTGCTTATGCAGGAGCTCATGGCCAT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTAGGGATCGCATCCGCTaGTCCTTCTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFRDRIR*SFCSST
Trigger: GGTGGAGGAGCAGAAGGAGCAGCGGATGCGATCCCT...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCATCAGCACACTCCTTaGCAGGTTTGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQHQHTP*QVCLCC
Trigger: GCAGCAAAGACAAACCTGGCAAGGAGTGTGCTGATG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAACTCCATTGTCCAAGTaGCGACCTACCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRTPLSK*RPTCQP
Trigger: AGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTATGCACATCCCACTTTaGTCAGGGGAGGACGTTTCC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPMHIPL*SGEDVS
Trigger: GGAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCAT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCCAAACTGTTGTCACTaGTCGTGGGCCAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSPNCCH*SWARKQ
Trigger: TTGCTTCCTGGCCCACGAGCAGTGACAACAGTTTGG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGCCCCCATTACCAGGATaGAGGGCACTTCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEPPLPG*RALPST
Trigger: CGTGCTGGGAAGTGCCCTCCATCCTGGTAATGGGGG...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTACAGAGGTCTGGTCTTaGTCCATGCTTCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTTEVWS*SMLRES
Trigger: GGACTCTCGAAGCATGGACCAAGACCAGACCTCTGT...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCTTTGCTGCACAGCATaGCAGTCAGGCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLCCTA*QSGSHS
Trigger: AGAATGAGAGCCTGACTGCCATGCTGTGCAGCAAAG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCAGCAATCTTGGCGATaGGAATGTCATTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQQQSWR*ECHCCC
Trigger: GCAGCAGCAATGACATTCCCATCGCCAAGATTGCTG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCCACCAGGTTGCTGTTaGCCCGCTTTAGATCATTCA +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPPPGCC*PALDHS
Trigger: TGAATGATCTAAAGCGGGCCAACAGCAACCTGGTGG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGTTGAGCATCCTCACTTaGGTCTCATGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWLSILT*VSCLST
Trigger: GGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAA...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTTTGAGCATCCTCACTTaGGTCTCATGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLSILT*VSCLST
Trigger: GGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAA...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAGTTTCATTGGTGTGTaGCCTGGAGTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRSFIGV*PGVLLL
Trigger: GAGGAGGAGAACTCCAGGCCACACACCAATGAAACT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGTTCAGGCACAGTCCTaGTGGTGGTCTGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQVQAQS*WWSVCN
Trigger: GTTACAAACAGACCACCACCAGGACTGTGCCTGAAC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGTTCAGGCACAGTCCTaGTGGTGGTCTGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRVQAQS*WWSVCN
Trigger: GTTACAAACAGACCACCACCAGGACTGTGCCTGAAC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGAAGGGAACTGTGAAATaGGTCCTTTGGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQKGTVK*VLWLCA
Trigger: GGCACAGAGCCAAAGGACCCATTTCACAGTTCCCTT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTGGCTCTGGAGGTCCCTaGCACCAGAGTCGTATTCCC +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFGSGGP*HQSRIP
Trigger: GGGAATACGACTCTGGTGCCAGGGACCTCCAGAGCC...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGGTGAGGTGTGGCCAGTaGTCACTGGGCAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRVRCGQ*SLGSHW
Trigger: CCAGTGACTGCCCAGTGACCACTGGCCACACCTCAC...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCAACTCCGGAATTCATaGTGCACTTTTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWQLRNS*CTFQSW
Trigger: CCAGCTCTGAAAAGTGCATCATGAATTCCGGAGTTG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR TCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCGCTGTGGAGCTCTGTaGTGCGTTCCTCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWRCGAL*CVPHSE
Trigger: TTCGCTATGAGGAACGCATCACAGAGCTCCACAGCG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACGCTGTGGAGCTCTGTaGTGCGTTCCTCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGRCGAL*CVPHSE
Trigger: TTCGCTATGAGGAACGCATCACAGAGCTCCACAGCG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCGTGTTGGCTCTGGCTaGGTTCTGATCGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWRVGSG*VLIAVL
Trigger: CAGAACTGCGATCAGAACTCAGCCAGAGCCAACACG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACGTGTTGGCTCTGGCTaGGTTCTGATCGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGRVGSG*VLIAVL
Trigger: CAGAACTGCGATCAGAACTCAGCCAGAGCCAACACG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGCTCGCTGGCTGTGGTaGGCTGCTCAATGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWARWLW*AAQCAC
Trigger: ACAAGCACATTGAGCAGCTCACCACAGCCAGCGAGC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAACTCTGTAGTCGAGTTTaGAGCTCTCTGACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKLCSRV*SSLTLL
Trigger: GAGGAGGGTCAGAGAGCTTCAAACTCGACTACAGAG...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGATATGCTACTGATTTCTaGGCCCAGGACTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRYATDF*AQDWPI
Trigger: GATCGGCCAGTCCTGGGCTCAGAAATCAGTAGCATA...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAATATTGGAGCAGTCCTaGAGTGAGTGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRILEQS*SEWARC
Trigger: ACACCTGGCCCACTCACTTCAGGACTGCTCCAATAT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATGGTCATTTTGGGATTTaGGGTGCTCAATCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDGHFGI*GAQSGY
Trigger: ATAGCCGGATTGAGCACCTCAAATCCCAAAATGACC...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGCTCGCTTGAGCATCTaGGTGATGTTTTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKARLSI*VMFSSP
Trigger: GGGGGATGAAAACATCACTCAGATGCTCAAGCGAGC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACAGCCCTGTCATTCTTaGGCTGCTGGATATAATCCT +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRQPCHS*AAGYNP
Trigger: AGGATTATATCCAGCAGCTCAAGAATGACAGGGCTG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAACTCTGCAGATTGCTaGTGTCGGATTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPNSADC*CRISLL
Trigger: GAGCAGTGAAATCCGACATCAGCAATCTGCAGAGTT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAACTCTGCAGATTGCTaGTGTCGGATTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDNSADC*CRISLL
Trigger: GAGCAGTGAAATCCGACATCAGCAATCTGCAGAGTT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTGAGCTATTCTTTGCTTaGGCATCCTCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPELFFA*ASSLGS
Trigger: AGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTC...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGGAGCTATTCTTTGCTTaGGCATCCTCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWELFFA*ASSLGS
Trigger: AGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTC...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACAGAACTCCGGTGCGTaGGTGCTGATTAAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRQNSGA*VLIKAK
Trigger: CTTCGCTTTAATCAGCACTCACGCACCGGAGTTCTG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGGGGAGAGTGAGTGCTaGAAGCAGAAACGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGGESEC*KQKRGS
Trigger: AGAGCCTCGTTTCTGCTTTCAGCACTCACTCTCCCC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTACTCTGTCCCCGTCATaGCAACAGGAGCTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPTLSPS*QQELSL
Trigger: AAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACTGGTAAGCTCACACTaGTGGCACTCGCAACTACGG +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGLVSSH*WHSQLR
Trigger: CCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAGAATGTCAAGGCTCTaGCTTAGAAGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRRMSRL*LRRGPS
Trigger: AGAGGGACCTCTTCTAAGTCAGAGCCTTGACATTCT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTAACAGGAGATGCTTCTaGAGGCCACAAGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPNRRCF*RPQVWS
Trigger: GCTCCAAACTTGTGGCCTTCAGAAGCATCTCCTGTT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCAGCTTCTGGAGGGCTaGCTGGCTCTGCACATCCGG +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMQLLEG*LALHIR
Trigger: CCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR TCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTTGGAGAGCAGCCTGCTaGTGCAAAGAGCTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFWRAAC*CKELPP
Trigger: TGGCGGAAGCTCTTTGCATCAGCAGGCTGCTCTCCA...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR GCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTGGACTGCTCGCACTGTaGCTTGGCCAATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTGLLAL*LGQFLF
Trigger: GAAAAGAAATTGGCCAAGGCACAGTGCGAGCAGTCC...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCTGAGTTCAGGTCACTaGAGTTGTCCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSLSSGH*SCPCQQ
Trigger: CTGCTGACATGGACAACTGCAGTGACCTGAACTCAG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGGTGAGCTGCTCAATGTaGTTGTCCACCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRVSCSM*LSTSAT
Trigger: CGTGGCCGAGGTGGACAAGCACATTGAGCAGCTCAC...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACTGGCTGTGGTGAGCTaGTCAATGTGCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGLAVVS*SMCLST
Trigger: GGTGGACAAGCACATTGAGCAGCTCACCACAGCCAG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGTTCTTCCTCTTTGCTaGACAGCATGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKVLPLC*TAWQSG
Trigger: GCCTGACTGCCATGCTGTGCAGCAAAGAGGAAGAAC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCTGGGAATGTCATTGCTaGTGCTGCTTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSWECHC*CCLCSA
Trigger: AGCTGAGCACAAGCAGCAGCAGCAATGACATTCCCA...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGGTGTTCAGCCACACTaGTGGATACCCCTATGCTAC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKGVQPH*WIPLCY
Trigger: GTAGCATAGGGGTATCCAGCAGTGTGGCTGAACACC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTATTTTCCCACCAGCATaGTCATCCTCTCGGCATTGC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPIFPPA*SSSRHC
Trigger: GCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAAT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAGTTCGTAGGCTTCGATaGACTGCTCGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRVRRLR*TARCTA
Trigger: TGCAGTACAGCGAGCAGTGCATCGAAGCCTACGAAC...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGAGGATCGATGTGGATaGTTTCCAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKEDRCG*FPAPAW
Trigger: CCATGCTGGAGCTGGAAAGCATCCACATCGATCCTC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCTCCTGCATAAGCACTaGGTTTTCCAGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRALLHKH*VFQIQP
Trigger: AGGCTGGATCTGGAAAACGCAGTGCTTATGCAGGAG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTATGGCCATGAGCTCCTaGATAAGCACTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPMAMSS*ISTAFS
Trigger: GGAAAACGCAGTGCTTATGCAGGAGCTCATGGCCAT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGAAGTGCCGACCTACCTaGCAGCCTTCCCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWKCRPT*QPSLSS
Trigger: GGAGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTT...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGAGGTTCTTTAATTCATaGCAGGGACACAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQRFFNS*QGHRQS
Trigger: GGACTGCCTGTGTCCCTGGCATGAATTAAAGAACCT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTCTGCAGGAGGCTCGGTaGCGCGGCGCGCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCLQEAR*RGALAA
Trigger: AGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAG...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATCCGCAATGACGCTGTaGAGCTCTGTGATGCGTTCC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGSAMTL*SSVMRS
Trigger: GGAACGCATCACAGAGCTCCACAGCGTCATTGCGGA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGGCTGGAGGGACCTGTaGCCTGCACGCTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMGWRDL*PARSVV
Trigger: GACTACAGAGCGTGCAGGCCACAGGTCCCTCCAGCC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCCCTCTCAGCAATCTTaGCGATGGGAATGTCATTGC +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTPSQQS*RWECHC
Trigger: GCAATGACATTCCCATCGCCAAGATTGCTGAGAGGG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCCAGCCTCAGCGCTGTaGCATTGGATTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSPASAL*HWIRIF
Trigger: GAAAATACGAATCCAATGCCACAGCGCTGAGGCTGG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGTGCTGGTGTGGCTGTTaGAGGAAAGGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGECWCGC*RKGSPR
Trigger: CCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCA...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCGCAACTACTGGCTGTaGAGCTGGTTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWRNYWL*SWLCWC
Trigger: ACACCAGCACAACCAGCTCCACAGCCAGTAGTTGCG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACTGAGAGGATCGATGTaGATGCTTTCCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRLRGSM*MLSSSS
Trigger: GCTGGAGCTGGAAAGCATCCACATCGATCCTCTCAG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCCACCAGGTTGCTGTTaGCCCGCTTTAGATCATTCA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAPPGCC*PALDHS
Trigger: TGAATGATCTAAAGCGGGCCAACAGCAACCTGGTGG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTTGAGCATCCTCACTTaGGTCTCATGTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPLSILT*VSCLST
Trigger: GGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTAGTTTCATTGGTGTGTaGCCTGGAGTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPSFIGV*PGVLLL
Trigger: GAGGAGGAGAACTCCAGGCCACACACCAATGAAACT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGAAGAGCGGGCACCTCTaGATACAGTCCACAATGTCA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAKSGHL*IQSTMS
Trigger: TGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTT...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGTTCAGGCACAGTCCTaGTGGTGGTCTGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAVQAQS*WWSVCN
Trigger: GTTACAAACAGACCACCACCAGGACTGTGCCTGAAC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATCTGTTGTTTCGTTTTaGAGATGGGCAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPSVVSF*RWAASL
Trigger: CAGTGAGGCTGCCCATCTCCAAAACGAAACAACAGA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGTGAAATGGGTCCTTTaGCTCTGTGCCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPVKWVL*LCAHFF
Trigger: GAAGAAATGGGCACAGAGCCAAAGGACCCATTTCAC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGCACCCTCTGCAGTTCTaGGTTCAGGTCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVHPLQF*VQVTAV
Trigger: AACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTG...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCTCTGTAGTCGAGTTTaGAGCTCTCTGACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWLCSRV*SSLTLL
Trigger: GAGGAGGGTCAGAGAGCTTCAAACTCGACTACAGAG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGATGGCAGATCCGTGTaGGTAGAGTGTTTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQDGRSV*VECLEN
Trigger: ATTTTCCAAACACTCTACTCACACGGATCTGCCATC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGGAACTGCCCCAGGATaGGGCTCTGCTCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMGTAPG*GSAHSL
Trigger: CAGAGAGTGAGCAGAGCCTCATCCTGGGGCAGTTCC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACTGCCGTCCAGCTTCATaGGCAGGGCCTTGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNCRPAS*AGPWQR
Trigger: ACGCTGCCAAGGCCCTGCTCATGAAGCTGGACGGCA...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCAGCCCTGTCATTCTTaGGCTGCTGGATATAATCCT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAQPCHS*AAGYNP
Trigger: AGGATTATATCCAGCAGCTCAAGAATGACAGGGCTG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGCACTCACCAGCTCTTaGACTCTGGCCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGALTSS*TLAFNF
Trigger: GAAGTTGAAGGCCAGAGTTCAAGAGCTGGTGAGTGC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTCCGGTGCGTGAGTGCTaGTTAAAGCGAAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPPVREC*LKRSFI
Trigger: AATGAAACTTCGCTTTAATCAGCACTCACGCACCGG...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCCGGTGCGTGAGTGCTaGTTAAAGCGAAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTPVREC*LKRSFI
Trigger: AATGAAACTTCGCTTTAATCAGCACTCACGCACCGG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGAAACGAGGCTCTGCTaGGCAGGCACAGAACATGTG +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWETRLC*AGTEHV
Trigger: CACATGTTCTGTGCCTGCTCAGCAGAGCCTCGTTTC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTGTCTGGGATCCCACTaGTGCACAGCCGCCAGACCA +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMCLGSH*CTAARP
Trigger: TGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCGAGATTCTAGAAGATaGGCCCAGCATCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWRDSRR*AQHLPK
Trigger: TTTTGGTAGATGCTGGGCTCATCTTCTAGAATCTCG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACGAGATTCTAGAAGATaGGCCCAGCATCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPRDSRR*AQHLPK
Trigger: TTTTGGTAGATGCTGGGCTCATCTTCTAGAATCTCG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGATTAATAAGGCTCCACTaGGAGGGAGAAATCCCAGAA +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRLIRLH*EGEIPE
Trigger: TTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAA...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAACAGGAGCTAAGTCTTaGACTGGGGGTTACACAGCA +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRTGAKS*TGGYTA
Trigger: TGCTGTGTAACCCCCAGTTCAAGACTTAGCTCCTGT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAACAGGAGCTAAGTCTTaGACTGGGGGTTACACAGCA +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKTGAKS*TGGYTA
Trigger: TGCTGTGTAACCCCCAGTTCAAGACTTAGCTCCTGT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATAACAGAGATGGTTACTaGCTAAAAGGGGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDNRDGY*LKGGNH
Trigger: GTGGTTACCCCCTTTTAGTCAGTAACCATCTCTGTT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGAGAATGTCAAGGCTCTaGCTTAGAAGAGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRARMSRL*LRRGPS
Trigger: AGAGGGACCTCTTCTAAGTCAGAGCCTTGACATTCT...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACAGGCAGTCCAATCTTaGTCGGGTAACTACGGTGCA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGQAVQS*SGNYGA
Trigger: TGCACCGTAGTTACCCGATCAAGATTGGACTGCCTG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTATTTCCGGGACTGAATaGTTTCTTCCTCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPISGTE*FLPLGH
Trigger: GTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAAT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTGCTATTTCCGGGACTaGATGATTTCTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDCYFRD*MISSSW
Trigger: CCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTAGTACGGCATCAGTGTaGATGTGGGGGAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPSTASV*MWGKFV
Trigger: CACAAATTTCCCCCACATTCACACTGATGCCGTACT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACGGAGAGGCTGCAGCTaGTCTTCTTCCTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRRRGCS*SSSCRR
Trigger: TCTGCGGCAGGAAGAAGAGCAGCTGCAGCCTCTCCG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGGAATGTCATTGCTGCTaGTGCTTGTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWECHCC*CLCSAP
Trigger: GGGAGCTGAGCACAAGCAGCAGCAGCAATGACATTC...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATGGGAATGTCATTGCTaGTGCTGCTTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKWECHC*CCLCSA
Trigger: AGCTGAGCACAAGCAGCAGCAGCAATGACATTCCCA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGATTTTGGGATTTGAGGTaGTCAATCCGGCTATTCAGC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRFWDLR*SIRLFS
Trigger: GCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAA...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTTTTTGGGATTTGAGGTaGTCAATCCGGCTATTCAGC +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPFWDLR*SIRLFS
Trigger: GCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAA...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATCATCCTCTCGGCATTaGTTTTACATTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPSSSRH*FYIPPR
Trigger: CCTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAATTTTCCCACCAGCATaGTCATCCTCTCGGCATTGC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRIFPPA*SSSRHC
Trigger: GCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAAT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGCTCTGCTCACTCTCTaGCAGCGCCAGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRALLTL*QRQEEF
Trigger: GAACTCCTCCTGGCGCTGGCAGAGAGTGAGCAGAGC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAGGGATCGCATCCGCTaGTCCTTCTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMRDRIR*SFCSST
Trigger: GGTGGAGGAGCAGAAGGAGCAGCGGATGCGATCCCT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACATCAGCACACTCCTTaGCAGGTTTGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRHQHTP*QVCLCC
Trigger: GCAGCAAAGACAAACCTGGCAAGGAGTGTGCTGATG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAGCAGAGCTATTCTTTaGTTGAGCATCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRSRAIL*LSILTW
Trigger: CCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGGTCCAGAGCTACAAATaGACCCATGTGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWVQSYK*THVEEI
Trigger: AATCTCTTCCACATGGGTGCATTTGTAGCTCTGGAC...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGTCCAGAGCTACAAATaGACCCATGTGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRVQSYK*THVEEI
Trigger: AATCTCTTCCACATGGGTGCATTTGTAGCTCTGGAC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGATTTCTCGAACAAGCTaGATGCGGCATCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMISRTS*MRHLVK
Trigger: TTTCACAAGATGCCGCATGCAGCTTGTTCGAGAAAT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCAGTAGAGGAGCACACTaGAGCATCTTCCTATGCTTC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSSRGAH*SIFLCF
Trigger: GAAGCATAGGAAGATGCTGCAGTGTGCTCCTCTACT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515367.6
CDS-3UTR CCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTTCGTTGACCTCGTGTTaGCTCTGGCTGAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVASLTSC*LWLSSD
Trigger: ATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGA...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAACAGAGGTCTGGTCTTaGTCCATGCTTCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGTEVWS*SMLRES
Trigger: GGACTCTCGAAGCATGGACCAAGACCAGACCTCTGT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGACAGAGGTCTGGTCTTaGTCCATGCTTCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVTEVWS*SMLRES
Trigger: GGACTCTCGAAGCATGGACCAAGACCAGACCTCTGT...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGTCTCTTCAGCCAGGTTaGGATACAGGTCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWSLQPG*DTGPGQ
Trigger: TTGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGA...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTTCTCTTCAGCCAGGTTaGGATACAGGTCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFSLQPG*DTGPGQ
Trigger: TTGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGA...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAACTTTGCTGCACAGCATaGCAGTCAGGCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKLCCTA*QSGSHS
Trigger: AGAATGAGAGCCTGACTGCCATGCTGTGCAGCAAAG...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACTTTGCTGCACAGCATaGCAGTCAGGCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRLCCTA*QSGSHS
Trigger: AGAATGAGAGCCTGACTGCCATGCTGTGCAGCAAAG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATATTCCTCCAAGGTTATaGTCAGGAGGTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDIPPRL*SGGHFG
Trigger: CCCAAAATGACCTCCTGACCATAACCTTGGAGGAAT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTCCTCCAAGGTTATaGTCAGGAGGTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWIPPRL*SGGHFG
Trigger: CCCAAAATGACCTCCTGACCATAACCTTGGAGGAAT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAATTCCTCCAAGGTTATaGTCAGGAGGTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRIPPRL*SGGHFG
Trigger: CCCAAAATGACCTCCTGACCATAACCTTGGAGGAAT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCTCAGCGCTGTGGCATTaGATTCGTATTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSSALWH*IRIFPP
Trigger: TGGTGGGAAAATACGAATCCAATGCCACAGCGCTGA...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTCAGCGCTGTGGCATTaGATTCGTATTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRASALWH*IRIFPP
Trigger: TGGTGGGAAAATACGAATCCAATGCCACAGCGCTGA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGCTGGTTGTGCTGGTGTaGCTGTTGGAGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRLVVLV*LLEERL
Trigger: GAGCCTTTCCTCCAACAGCCACACCAGCACAACCAG...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATGGAGCTGGTTGTGCTaGTGTGGCTGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGWSWLC*CGCWRK
Trigger: TTTCCTCCAACAGCCACACCAGCACAACCAGCTCCA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAAAGCGAAGTTTCATTaGTGTGTGGCCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRKAKFH*CVAWSS
Trigger: AGAACTCCAGGCCACACACCAATGAAACTTCGCTTT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFPQGLS*GTPLSK
Trigger: CTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGAAACAAATGTCTaGGATCCCACTGATGCACAG +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDTETNV*DPTDAQ
Trigger: CTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATTGAGACCCGGGACTTaGAAACCAAAGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKLRPGT*KPKPCC
Trigger: ACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAACTGCTGGCCTCTCAGTaGTTGCTTTTAGGATACAGC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKLLASQ*LLLGYS
Trigger: GCTGTATCCTAAAAGCAACCACTGAGAGGCCAGCAG...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTGAAATGGGTCCTTTaGCTCTGTGCCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSVKWVL*LCAHFF
Trigger: GAAGAAATGGGCACAGAGCCAAAGGACCCATTTCAC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGATCTTCCATATTCAGCTaGCGACAGACCATTAGCAAG +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRSSIFS*RQTISK
Trigger: CTTGCTAATGGTCTGTCGCCAGCTGAATATGGAAGA...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCTGTTGTCACTGCTCGTaGGCCAGGAAGCAATTCTAT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSCCHCS*ARKQFY
Trigger: ATAGAATTGCTTCCTGGCCCACGAGCAGTGACAACA...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACACATTCTTCCTTTGTaGAGTGTGACTAGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRHILPL*SVTRSG
Trigger: GCCACTTCTAGTCACACTCCACAAAGGAAGAATGTG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515367.6
CDS-3UTR TCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGTTCGAGAGTCCTCGTTaGCCTCGTGTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGFESPR*PRVGSG
Trigger: GCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAA...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCTCTGTAGTCGAGTTTaGAGCTCTCTGACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWLCSRV*SSLTLL
Trigger: GAGGAGGGTCAGAGAGCTTCAAACTCGACTACAGAG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAATACCCCTATGCTACTaGTTTCTGAGCCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPIPLCY*FLSPGL
Trigger: CAGTCCTGGGCTCAGAAATCAGTAGCATAGGGGTAT...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGCTCGCTTGAGCATCTaGGTGATGTTTTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWARLSI*VMFSSP
Trigger: GGGGGATGAAAACATCACTCAGATGCTCAAGCGAGC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAAACTCTGCAGATTGCTaGTGTCGGATTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKNSADC*CRISLL
Trigger: GAGCAGTGAAATCCGACATCAGCAATCTGCAGAGTT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTTAATAAGGCTCCACTaGGAGGGAGAAATCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRALIRLH*EGEIPE
Trigger: TTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAACAGGAGCTAAGTCTTaGACTGGGGGTTACACAGCA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGTGAKS*TGGYTA
Trigger: TGCTGTGTAACCCCCAGTTCAAGACTTAGCTCCTGT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCTGGTCCTTCTAGACTaGTACCAGTTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSLVLLD*YQLICC
Trigger: ACAACAGATCAACTGGTATCAGTCTAGAAGGACCAG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTAACAGAGATGGTTACTaGCTAAAAGGGGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: APPPQPSLKTLVALWRYPNRDGY*LKGGNH
Trigger: GTGGTTACCCCCTTTTAGTCAGTAACCATCTCTGTT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCTGTTCCCCAGTCCATaGCAGATTTTTGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVALFPSP*QIFVAG
Trigger: ACCAGCTACAAAAATCTGTCATGGACTGGGGAACAG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAATGGTGATCTGCATGTaGAACTGTCTTTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPMVICM*NCLSLH
Trigger: GTGTAGAGAAAGACAGTTTCACATGCAGATCACCAT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATTCCTTTGTGGAGTGTaGCTAGAAGTGGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKFLCGV*LEVATL
Trigger: CAGAGTTGCCACTTCTAGTCACACTCCACAAAGGAA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515367.6
CDS-3UTR GCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGAGGCTCAATATCCACTaGTTGGTCCCTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWRLNIH*LVPSAT
Trigger: TGTGGCAGAAGGGACCAAGCAGTGGATATTGAGCCT...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCGTTCCCTCTCTGTTTaGTGGAGACGTTTATTAAGT +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDRSLSV*WRRLLS
Trigger: ACTTAATAAACGTCTCCAGCAAACAGAGAGGGAACG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGGACTGCTCGCACTGTaGCTTGGCCAATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPGLLAL*LGQFLF
Trigger: GAAAAGAAATTGGCCAAGGCACAGTGCGAGCAGTCC...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCTGAGTTCAGGTCACTaGAGTTGTCCATGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWLSSGH*SCPCQQ
Trigger: CTGCTGACATGGACAACTGCAGTGACCTGAACTCAG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWPVSTL*SSEFRS
Trigger: TGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGATAGCCAGGTCACAGTaGTCGCTGGCTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMIARSQ*SLAVVS
Trigger: GCTCACCACAGCCAGCGAGCACTGTGACCTGGCTAT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGATAGCCAGGTCACAGTaGTCGCTGGCTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGIARSQ*SLAVVS
Trigger: GCTCACCACAGCCAGCGAGCACTGTGACCTGGCTAT...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCATGGGAATGTCATTGCTaGTGCTGCTTGTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPWECHC*CCLCSA
Trigger: AGCTGAGCACAAGCAGCAGCAGCAATGACATTCCCA...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGGTGTTCAGCCACACTaGTGGATACCCCTATGCTAC +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEGVQPH*WIPLCY
Trigger: GTAGCATAGGGGTATCCAGCAGTGTGGCTGAACACC...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGGTTCGTAGGCTTCGATaGACTGCTCGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRVRRLR*TARCTA
Trigger: TGCAGTACAGCGAGCAGTGCATCGAAGCCTACGAAC...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGTTCGTAGGCTTCGATaGACTGCTCGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWVRRLR*TARCTA
Trigger: TGCAGTACAGCGAGCAGTGCATCGAAGCCTACGAAC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAATGGCCATGAGCTCCTaGATAAGCACTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPMAMSS*ISTAFS
Trigger: GGAAAACGCAGTGCTTATGCAGGAGCTCATGGCCAT...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGATCCGCTGCTCCTTCTaGTCCTCCACCTCGGACTTC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMIRCSF*SSTSDF
Trigger: GAAGTCCGAGGTGGAGGAGCAGAAGGAGCAGCGGAT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGATCATTCACGAACTCTaGAGATTGCTGATGTCGGAT +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQIIHEL*RLLMSD
Trigger: ATCCGACATCAGCAATCTGCAGAGTTCGTGAATGAT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGCAGGATTTTATTCCTaGTTCAGCCACATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQAGFYS*FSHMFL
Trigger: CAGAAACATGTGGCTGAAGCAGGAATAAAATCCTGC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGTCCCTCTCTGTTTGCTaGAGACGTTTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQSLSVC*RRLLSS
Trigger: GGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGA...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTGTAACCATGGTAGACTaGTTTTCGGGGATAGAGACA +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTVTMVD*FSGIET
Trigger: TGTCTCTATCCCCGAAAACCAGTCTACCATGGTTAC...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACCCTCTCAGCAATCTTaGCGATGGGAATGTCATTGC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGPSQQS*RWECHC
Trigger: GCAATGACATTCCCATCGCCAAGATTGCTGAGAGGG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGTCAGGAGGTCATTTTaGGATTTGAGGTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAVRRSF*DLRCSI
Trigger: GATTGAGCACCTCAAATCCCAAAATGACCTCCTGAC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACCAGCCTCAGCGCTGTaGCATTGGATTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGPASAL*HWIRIF
Trigger: GAAAATACGAATCCAATGCCACAGCGCTGAGGCTGG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCAAAGCGAAGTTTCATTaGTGTGTGGCCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSKAKFH*CVAWSS
Trigger: AGAACTCCAGGCCACACACCAATGAAACTTCGCTTT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGTTTACACGCTGTTGTaGGCCCAGGAGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRVYTLL*AQEGRA
Trigger: CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAAC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTAGTCCTTTTAAATGCTaGAGGCACACACAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTSPFKC*RHTQVC
Trigger: ACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACT...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCACAGTCCTGGTGGTaGTCTGTTTGTAACTTTAGT +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSAQSWW*SVCNFS
Trigger: ACTAAAGTTACAAACAGACCACCACCAGGACTGTGC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCGAACAGAAGGCTGTaGAATTTGTATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSANRRL*NLYHAL
Trigger: CAGAGCATGATACAAATTCCACAGCCTTCTGTTCGC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAAAAACTAGCTGGGTATaGTGGCGGGCACCTGTAATT +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRKTSWV*WRAPVI
Trigger: AATTACAGGTGCCCGCCACCATACCCAGCTAGTTTT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTAAAACTAGCTGGGTATaGTGGCGGGCACCTGTAATT +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAKTSWV*WRAPVI
Trigger: AATTACAGGTGCCCGCCACCATACCCAGCTAGTTTT...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATACCTGGAGCAAGAATaGAGACAGAAGTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKYLEQE*RQKSVG
Trigger: GCCTACTGACTTCTGTCTCCATTCTTGCTCCAGGTA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGCCTCAGTCCAACAATaGGAAATATATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRASVQQ*EIYSKG
Trigger: TCCCTTGGAATATATTTCCCATTGTTGGACTGAGGC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACTTCTGGAGGGCTGACTaGCTCTGCACATCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNFWRAD*LCTSGL
Trigger: GAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAA...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACTGAATGGAGTGTGTTaGCCAGCTCTAGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRLNGVC*PALDSF
Trigger: GAAGCTATCTAGAGCTGGCCAACACACTCCATTCAG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR TCA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCACAACTCCGGAATTCATaGTGCACTTTTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPQLRNS*CTFQSW
Trigger: CCAGCTCTGAAAAGTGCATCATGAATTCCGGAGTTG...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGGGTCATTTTGGGATTTaGGGTGCTCAATCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVGHFGI*GAQSGY
Trigger: ATAGCCGGATTGAGCACCTCAAATCCCAAAATGACC...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACCCAGCATGGTCAGCTTaGCCGCAGCCCTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNPAWSA*PQPCHS
Trigger: AGAATGACAGGGCTGCGGTCAAGCTGACCATGCTGG...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACGACGAATGGCGTTGGTaGACTCCGCAGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNDEWRW*TPQPAH
Trigger: ATGAGCTGGCTGCGGAGTTCACCAACGCCATTCGTC...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGGGGAGAGTGAGTGCTaGAAGCAGAAACGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMGESEC*KQKRGS
Trigger: AGAGCCTCGTTTCTGCTTTCAGCACTCACTCTCCCC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACATGTGGAAGAGATTTaGTTCAGCAGAACAGCAATT +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPHVEEI*FSRTAI
Trigger: AATTGCTGTTCTGCTGAATCAAATCTCTTCCACATG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGAGTCTCTTTTGCTTGTaGTTTGCACAGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQSLFCL*FAQLVL
Trigger: CAAAACCAACTGTGCAAATCACAAGCAAAAGAGACT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATGCTATTTCCGGGACTaGATGATTTCTTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKCYFRD*MISSSW
Trigger: CCAAGAGGAAGAAATCATTCAGTCCCGGAAATAGCA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATGACTGTGGAAAGATaGAGTACTAGTCAAGGATGT +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWMTVER*STSQGC
Trigger: ACATCCTTGACTAGTACTTCATCTTTCCACAGTCAT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCGGACGAGCCATTGCTaGAGGAGGCTCGGTGGCGCG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWRTSHC*RRLGGA
Trigger: CGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATTTTGGGATTTGAGGTaGTCAATCCGGCTATTCAGC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKFWDLR*SIRLFS
Trigger: GCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAAGGCTCTCCCAGGGCTaGACGCTGCAGCCGGCCACG +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKRLSQG*TLQPAT
Trigger: CGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCT...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCTCCTGCATAAGCACTaGGTTTTCCAGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWLLHKH*VFQIQP
Trigger: AGGCTGGATCTGGAAAACGCAGTGCTTATGCAGGAG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTTCCTGGGCCTCCCGCGTaGTCAGCTTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EYIRVQYYLWFQASMGDFPGPPA*SASAPG
Trigger: CCCTGGAGCTGAAGCTGAGCACGCGGGAGGCCCAGG...AAAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTTGATGCTTTTTCTTTaGTTTCTCATAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLMLFL*FLIGSH
Trigger: GTGGCTGCCTATGAGAAAGCAAAGAAAAAGCATCAA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTAGCAGAGCTATTCTTTaGTTGAGCATCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVASRAIL*LSILTW
Trigger: CCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCT...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAAGGTTCTTTAATTCATaGCAGGGACACAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGRFFNS*QGHRQS
Trigger: GGACTGCCTGTGTCCCTGGCATGAATTAAAGAACCT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTTCCTCTTGGTCACATaGAAAATCTCACCCAGATGT +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTFLLVT*KISPRC
Trigger: ACATCTGGGTGAGATTTTGCATGTGACCAAGAGGAA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGCTCGCACTGTGCCTTaGCCAATTTCTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGARTVP*PISFPE
Trigger: TTCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGTCCGCAATGACGCTGTaGAGCTCTGTGATGCGTTCC +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGSAMTL*SSVMRS
Trigger: GGAACGCATCACAGAGCTCCACAGCGTCATTGCGGA...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTCTCTTCAGCCAGGTTaGGATACAGGTCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMSLQPG*DTGPGQ
Trigger: TTGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCAGCAATCTTGGCGATaGGAATGTCATTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWQQSWR*ECHCCC
Trigger: GCAGCAGCAATGACATTCCCATCGCCAAGATTGCTG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCCCTCTCAGCAATCTTaGCGATGGGAATGTCATTGC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWPSQQS*RWECHC
Trigger: GCAATGACATTCCCATCGCCAAGATTGCTGAGAGGG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGTCAGGAGGTCATTTTaGGATTTGAGGTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKVRRSF*DLRCSI
Trigger: GATTGAGCACCTCAAATCCCAAAATGACCTCCTGAC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATACTGGCTGTGGAGCTaGTTGTGCTGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRYWLWS*LCWCGC
Trigger: ACAGCCACACCAGCACAACCAGCTCCACAGCCAGTA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACCCTTCTGTCCCCAGTaGCCTGCTGCAGTTTACTTC +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRPFCPQ*PAAVYF
Trigger: GAAGTAAACTGCAGCAGGCCACTGGGGACAGAAGGG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACTCCCAACAAGTACATaGGCCCTTCTGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRLPTST*ALLSPV
Trigger: CACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAAGTCCTTTTAAATGCTaGAGGCACACACAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRSPFKC*RHTQVC
Trigger: ACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGCACAGTCCTGGTGGTaGTCTGTTTGTAACTTTAGT +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKAQSWW*SVCNFS
Trigger: ACTAAAGTTACAAACAGACCACCACCAGGACTGTGC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACAGGCACAGTCCTGGTaGTGGTCTGTTTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGQAQSW*WSVCNF
Trigger: AAAGTTACAAACAGACCACCACCAGGACTGTGCCTG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATTTCATAGGGAACTTTaGATGGATTCTCTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: EREKSQNQESAPFPALPPFHREL*MDSLVL
Trigger: TAGCACCAGAGAATCCATCCAAAGTTCCCTATGAAA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATCTGTTGTTTCGTTTTaGAGATGGGCAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGSVVSF*RWAASL
Trigger: CAGTGAGGCTGCCCATCTCCAAAACGAAACAACAGA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGAATTCTGAACAGAGATaGTTACTGACTAAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWNSEQR*LLTKRG
Trigger: CCCCCTTTTAGTCAGTAACCATCTCTGTTCAGAATT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGTTGTTTAAAGCCTTATaGAGGAAAGGACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLFKAL*RKGHFQ
Trigger: CTGAAAGTGTCCTTTCCTCCATAAGGCTTTAAACAA...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTCAGGGCGGTGAGGTGTaGCCAGTGGTCACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HLLRYLRMACISYANTRTQGGEV*PVVTGQ
Trigger: CTGCCCAGTGACCACTGGCCACACCTCACCGCCCTG...AGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCACCTCATGCTCTCTCATaGGGTGGGACTGCTCGCACT +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAAPHALS*GGTART
Trigger: AGTGCGAGCAGTCCCACCTCATGAGAGAGCATGAGG...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCACCCTCTGCAGTTCTaGGTTCAGGTCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMHPLQF*VQVTAV
Trigger: AACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCTCTGTAGTCGAGTTTaGAGCTCTCTGACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMLCSRV*SSLTLL
Trigger: GAGGAGGGTCAGAGAGCTTCAAACTCGACTACAGAG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTATGCTACTGATTTCTaGGCCCAGGACTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMYATDF*AQDWPI
Trigger: GATCGGCCAGTCCTGGGCTCAGAAATCAGTAGCATA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGATGGCAGATCCGTGTaGGTAGAGTGTTTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPDGRSV*VECLEN
Trigger: ATTTTCCAAACACTCTACTCACACGGATCTGCCATC...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGCACTCACCAGCTCTTaGACTCTGGCCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRALTSS*TLAFNF
Trigger: GAAGTTGAAGGCCAGAGTTCAAGAGCTGGTGAGTGC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGAGCTATTCTTTGCTTaGGCATCCTCACTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWELFFA*ASSLGS
Trigger: AGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATTAATAAGGCTCCACTaGGAGGGAGAAATCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGLIRLH*EGEIPE
Trigger: TTCTGGGATTTCTCCCTCTCAGTGGAGCCTTATTAA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCATGTGGAAGAGATTTaGTTCAGCAGAACAGCAATT +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTHVEEI*FSRTAI
Trigger: AATTGCTGTTCTGCTGAATCAAATCTCTTCCACATG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCTAACTTTGACCAAATaGTTGACAGAAACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQLTLTK*LTETSE
Trigger: TTCACTGGTTTCTGTCAATCATTTGGTCAAAGTTAG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTAACTTTGACCAAATaGTTGACAGAAACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPLTLTK*LTETSE
Trigger: TTCACTGGTTTCTGTCAATCATTTGGTCAAAGTTAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATGATAATCGAAACTCTTaGGAGCTATTAAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: HVFTRCCGPRREERAPLDDNRNS*ELLRLT
Trigger: AGTCAACCTTAATAGCTCTCAAGAGTTTCGATTATC...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAATTTCCGGGACTGAATaGTTTCTTCCTCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGISGTE*FLPLGH
Trigger: GTGACCAAGAGGAAGAAATCATTCAGTCCCGGAAAT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAACTTGCTTTGTTCTGCTaGGCTGATATTTCACCTGAT +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKLALFC*ADISPD
Trigger: ATCAGGTGAAATATCAGCTCAGCAGAACAAAGCAAG...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGCATGCGGCATCTTGTaGAATCCTGAAAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGACGIL*NPERKS
Trigger: AGATTTCCTTTCAGGATTTCACAAGATGCCGCATGC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR GCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTCACGGACGAGCCATTaGTGCAGGAGGCTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCSRTSH*CRRLGG
Trigger: GCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGTTCACCCAGGACAGTTaGGAAGCGCAAACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGFTQDS*EAQTED
Trigger: ATCCTCCGTTTGCGCTTCGCAACTGTCCTGGGTGAA...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACGGCCACGGAGAGGCTaGAGCTGCTCTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQERPRRG*SCSSSC
Trigger: GCAGGAAGAAGAGCAGCTGCAGCCTCTCCGTGGCCG...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGTTCTTCCTCTTTGCTaGACAGCATGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRVLPLC*TAWQSG
Trigger: GCCTGACTGCCATGCTGTGCAGCAAAGAGGAAGAAC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGGTTCTTCCTCTTTGCTaGACAGCATGGCAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGVLPLC*TAWQSG
Trigger: GCCTGACTGCCATGCTGTGCAGCAAAGAGGAAGAAC...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGAATGTCATTGCTGCTaGTGCTTGTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRECHCC*CLCSAP
Trigger: GGGAGCTGAGCACAAGCAGCAGCAGCAATGACATTC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGTTCGTAGGCTTCGATaGACTGCTCGCTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRVRRLR*TARCTA
Trigger: TGCAGTACAGCGAGCAGTGCATCGAAGCCTACGAAC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGAGGCTCTCCCAGGGCTaGACGCTGCAGCCGGCCACG +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWRLSQG*TLQPAT
Trigger: CGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCT...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCATGCCAGGTTTGTCTTTaGTGCCGCTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAACQVCL*CRCWWS
Trigger: GCTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCA...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACCTGTCCCCAGTGGCCTaGTGCAGTTTACTTCCCATG +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNLSPVA*CSLLPM
Trigger: CATGGGAAGTAAACTGCAGCAGGCCACTGGGGACAG...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACACTCCATTGTCCAAGTaGCGACCTACCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNTPLSK*RPTCQP
Trigger: AGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGACATAAAGACTCTATaGAGAAACCTCCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQDIKTL*RNLLNF
Trigger: AAAGTTGAGGAGGTTTCTGCATAGAGTCTTTATGTC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTAGCATAATCAAGTaGCACCTAGTTCACCTTCAA +
Preference number: 4 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWISIIK*HLVHLQ
Trigger: TTGAAGGTGAACTAGGTGGCACTTGATTATGCTAAT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAACAGAGTTGCCAATGTaGGGGGACTGTGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRTELPM*GDCVSS
Trigger: ACTGCTCACACAGTCCCCGCACATTGGCAACTCTGT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTGCCAGGGCTGCTGAATaGAGCTCACTCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCARAAE*SSLSSA
Trigger: GGCCGAGCTGAGTGAGCTCCATTCAGCAGCCCTGGC...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGCTCGCACTGTGCCTTaGCCAATTTCTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWARTVP*PISFPE
Trigger: TTCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGGCTCGCACTGTGCCTTaGCCAATTTCTTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRARTVP*PISFPE
Trigger: TTCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGC...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGACCTCGTGTTGGCTCTaGCTGAGTTCTGATCGCAGT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMTSCWL*LSSDRS
Trigger: ACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGTAACCATGGTAGACTaGTTTTCGGGGATAGAGACA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGVTMVD*FSGIET
Trigger: TGTCTCTATCCCCGAAAACCAGTCTACCATGGTTAC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGAAATCTCTTGGATATTaGAGCAGTCCTGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAKSLGY*SSPEVS
Trigger: ACTCACTTCAGGACTGCTCCAATATCCAAGAGATTT...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACTACTGGCTGTGGAGCTaGTTGTGCTGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNYWLWS*LCWCGC
Trigger: ACAGCCACACCAGCACAACCAGCTCCACAGCCAGTA...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCTGAGAGGATCGATGTaGATGCTTTCCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGLRGSM*MLSSSS
Trigger: GCTGGAGCTGGAAAGCATCCACATCGATCCTCTCAG...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGACAAATGCACCCATGTaGAAGAGATTTGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRATNAPM*KRFDSA
Trigger: TGCTGAATCAAATCTCTTCCACATGGGTGCATTTGT...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGCGAACAGAAGGCTGTaGAATTTGTATCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGANRRL*NLYHAL
Trigger: CAGAGCATGATACAAATTCCACAGCCTTCTGTTCGC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGATGTGATTTGCACAGTTaGTTTTGTTTGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRCDLHS*FCLPQS
Trigger: GGACTGAGGCAAACAAAACCAACTGTGCAAATCACA...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTATAGGCTGTTCCCACTaGATAAGAAAATTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VGALHCPSADLPASLPFPIGCSH*IRKFAV
Trigger: TACAGCAAATTTTCTTATCCAGTGGGAACAGCCTAT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCCTCCTCGCCGGTGCTaGACGTGTCGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIPPRRC*TCRCCC
Trigger: GCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
3UTR CAA 72 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTaGAGACCCGGGACTTGGAAACCAAAGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILK*RPGTWKPKPCC
Trigger: ACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATATGCCGTCCAGCTTCATaGGCAGGGCCTTGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQICRPAS*AGPWQR
Trigger: ACGCTGCCAAGGCCCTGCTCATGAAGCTGGACGGCA...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATTTCACTGCTCTTGGTaGGTCTCTCCAAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRFHCSW*VSPRHS
Trigger: TGAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCGAGATTCTAGAAGATaGGCCCAGCATCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFRDSRR*AQHLPK
Trigger: TTTTGGTAGATGCTGGGCTCATCTTCTAGAATCTCG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTAGTCTCTTTTGCTTGTaGTTTGCACAGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVASLFCL*FAQLVL
Trigger: CAAAACCAACTGTGCAAATCACAAGCAAAAGAGACT...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGTCAGTGATGCTGTGGTaGCAGCAGTCAGCATTATTT +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWSVMLW*QQSALF
Trigger: AAATAATGCTGACTGCTGTCACCACAGCATCACTGA...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCAAAACAAGAATACATaGACAGCTGCTATCAACTTG +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTQNKNT*TAAINL
Trigger: CAAGTTGATAGCAGCTGTTCATGTATTCTTGTTTTG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTTTTGGGATTTGAGGTaGTCAATCCGGCTATTCAGC +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRFWDLR*SIRLFS
Trigger: GCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAA...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTTCATCCTCTCGGCATTaGTTTTACATTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFSSSRH*FYIPPR
Trigger: CCTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGA...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGTCATCCTCTCGGCATTaGTTTTACATTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGESSSRH*FYIPPR
Trigger: CCTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGA...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAACACTGCTCGCTGTACTaGAAGGCCAGCCTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQHCSLY*KASLSA
Trigger: AGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTG...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTGCTCTGCTCACTCTCTaGCAGCGCCAGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCALLTL*QRQEEF
Trigger: GAACTCCTCCTGGCGCTGGCAGAGAGTGAGCAGAGC...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCTCCTGCATAAGCACTaGGTTTTCCAGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YLRMACISYANTRTEAAGLLHKH*VFQIQP
Trigger: AGGCTGGATCTGGAAAACGCAGTGCTTATGCAGGAG...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTGGAATTTGTATCATaGTCTGAAAATAGACCTACC +
Preference number: 4 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSVEFVS*SENRPT
Trigger: GGTAGGTCTATTTTCAGAGCATGATACAAATTCCAC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGTGGAATTTGTATCATaGTCTGAAAATAGACCTACC +
Preference number: 4 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAVEFVS*SENRPT
Trigger: GGTAGGTCTATTTTCAGAGCATGATACAAATTCCAC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAACAATACTGACAAATaGAAACTTAGTCACATGTGC +
Preference number: 4 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRNNTDK*KLSHMC
Trigger: GCACATGTGACTAAGTTTGCATTTGTCAGTATTGTT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATCTCCTCCTCGCCGGTaGTGGACGTGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKSPPRR*WTCRCC
Trigger: GCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGTCCCTCTCTGTTTGCTaGAGACGTTTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWSLSVC*RRLLSS
Trigger: GGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGA...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACAGTGTCGTTCGCTCCTaGACATCCTCATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNSVVRS*TSSCSL
Trigger: GAGAGAGCATGAGGATGTCCAGGAGCGAACGACACT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATCGTTGACCTCGTGTTaGCTCTGGCTGAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRSLTSC*LWLSSD
Trigger: ATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTCGTTGACCTCGTGTTaGCTCTGGCTGAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMSLTSC*LWLSSD
Trigger: ATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTAACCATGGTAGACTaGTTTTCGGGGATAGAGACA +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEVTMVD*FSGIET
Trigger: TGTCTCTATCCCCGAAAACCAGTCTACCATGGTTAC...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGGGCTGGAGGGACCTGTaGCCTGCACGCTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQGWRDL*PARSVV
Trigger: GACTACAGAGCGTGCAGGCCACAGGTCCCTCCAGCC...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTAAATCTCTTGGATATTaGAGCAGTCCTGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAKSLGY*SSPEVS
Trigger: ACTCACTTCAGGACTGCTCCAATATCCAAGAGATTT...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGTCTTGCTTTCTGAGATaGCAGATCCGTGTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWSCFLR*QIRVSR
Trigger: TCTACTCACACGGATCTGCCATCTCAGAAAGCAAGA...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTCTTGCTTTCTGAGATaGCAGATCCGTGTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRSCFLR*QIRVSR
Trigger: TCTACTCACACGGATCTGCCATCTCAGAAAGCAAGA...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGTCAGGAGGTCATTTTaGGATTTGAGGTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWVRRSF*DLRCSI
Trigger: GATTGAGCACCTCAAATCCCAAAATGACCTCCTGAC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGATTCCTCCAAGGTTATaGTCAGGAGGTCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEIPPRL*SGGHFG
Trigger: CCCAAAATGACCTCCTGACCATAACCTTGGAGGAAT...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATGCTGGTGTGGCTGTTaGAGGAAAGGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRIYKGSVLPVVSGIYGGCWCGC*RKGSPR
Trigger: CCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCA...TCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAGTTTCATTGGTGTGTaGCCTGGAGTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMSFIGV*PGVLLL
Trigger: GAGGAGGAGAACTCCAGGCCACACACCAATGAAACT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTTGTTTAAAGCCTTATaGAGGAAAGGACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTLFKAL*RKGHFQ
Trigger: CTGAAAGTGTCCTTTCCTCCATAAGGCTTTAAACAA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCATCACTGGGCAGTCACTaGGCAGTCACTGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAASLGSH*AVTEPK
Trigger: CTTAGGCTCAGTGACTGCCCAGTGACTGCCCAGTGA...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAAGTGGCCAGTGGTCACTaGGCAGTCACTGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEVASGH*AVTGQS
Trigger: TGACTGCCCAGTGACTGCCCAGTGACCACTGGCCAC...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
3UTR CAA 72 bp AAAGCTGGTCCTTCTAGACTGATACCAGTTGATCTGTaGTTTCGTTTTGGAGATGGGCAGCCTCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KAGPSRLIPVDL*FRFGDGQPHCW
Trigger: CCAGCAGTGAGGCTGCCCATCTCCAAAACGAAACAACAGATCAACTGGTATCAGTCTAGAAGGACCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAAGCTCGCTGGCTGTGGTaGGCTGCTCAATGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEARWLW*AAQCAC
Trigger: ACAAGCACATTGAGCAGCTCACCACAGCCAGCGAGC...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGGAGCAGTCCTGAAGTaGGTGGGCCAGGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWGAVLK*VGQVFS
Trigger: GCTGAACACCTGGCCCACTCACTTCAGGACTGCTCC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATAGGAGCAGTCCTGAAGTaGGTGGGCCAGGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIGAVLK*VGQVFS
Trigger: GCTGAACACCTGGCCCACTCACTTCAGGACTGCTCC...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGGTCATTTTGGGATTTaGGGTGCTCAATCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMGHFGI*GAQSGY
Trigger: ATAGCCGGATTGAGCACCTCAAATCCCAAAATGACC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGGAACTGCCCCAGGATaGGGCTCTGCTCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWGTAPG*GSAHSL
Trigger: CAGAGAGTGAGCAGAGCCTCATCCTGGGGCAGTTCC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGCTCGCTTGAGCATCTaGGTGATGTTTTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAAARLSI*VMFSSP
Trigger: GGGGGATGAAAACATCACTCAGATGCTCAAGCGAGC...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACCAGCATGGTCAGCTTaGCCGCAGCCCTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEPAWSA*PQPCHS
Trigger: AGAATGACAGGGCTGCGGTCAAGCTGACCATGCTGG...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGCGCTGCTGGTGGAGCTaGGGGATCGCATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWRCWWS*GIASAA
Trigger: AGCAGCGGATGCGATCCCTCAGCTCCACCAGCAGCG...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCGCTGCACGTTGTCCTaGGTTCGGCTAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQRCTLS*VRLGTE
Trigger: CTCTGTCCCTAGCCGAACTCAGGACAACGTGCAGCG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGACCGGTGCGTGAGTGCTaGTTAAAGCGAAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRPVREC*LKRSFI
Trigger: AATGAAACTTCGCTTTAATCAGCACTCACGCACCGG...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATCTACGCTCTTCCCATaGCCTATAACTCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRSTLFP*PITPRD
Trigger: ATCTCTGGGAGTTATAGGTCATGGGAAGAGCGTAGA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACATGTGGAAGAGATTTaGTTCAGCAGAACAGCAATT +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGHVEEI*FSRTAI
Trigger: AATTGCTGTTCTGCTGAATCAAATCTCTTCCACATG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAGATAATCGAAACTCTTaGGAGCTATTAAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRDNRNS*ELLRLT
Trigger: AGTCAACCTTAATAGCTCTCAAGAGTTTCGATTATC...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACAAAACAAGAATACATaGACAGCTGCTATCAACTTG +
Preference number: 4 (lower is better)
Translates to: FRIQLSALRTGGWSILQRQNKNT*TAAINL
Trigger: CAAGTTGATAGCAGCTGTTCATGTATTCTTGTTTTG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGCGTTCCCTCTCTGTTTaGTGGAGACGTTTATTAAGT +
Preference number: 4 (lower is better)
Translates to: LRMACISYANTRTEAAGRRSLSV*WRRLLS
Trigger: ACTTAATAAACGTCTCCAGCAAACAGAGAGGGAACG...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCTCATGAGGTGGGACTaGTCGCACTGTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQLMRWD*SHCALA
Trigger: GGCCAAGGCACAGTGCGAGCAGTCCCACCTCATGAG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCACCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAAPVSTL*SSEFRS
Trigger: TGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGG...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACAGCTGCTCTTCTTCCTaGCGCAGACAACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNSCSSS*RRQHSP
Trigger: TGGAGAATGTTGTCTGCGGCAGGAAGAAGAGCAGCT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTCGGCCACGGAGAGGCTaGAGCTGCTCTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFRPRRG*SCSSSC
Trigger: GCAGGAAGAAGAGCAGCTGCAGCCTCTCCGTGGCCG...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACGGCCACGGAGAGGCTaGAGCTGCTCTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKRPRRG*SCSSSC
Trigger: GCAGGAAGAAGAGCAGCTGCAGCCTCTCCGTGGCCG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCACTGCTCGCTGTACTaGAAGGCCAGCCTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQHCSLY*KASLSA
Trigger: AGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGCTCTGCTCACTCTCTaGCAGCGCCAGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQALLTL*QRQEEF
Trigger: GAACTCCTCCTGGCGCTGGCAGAGAGTGAGCAGAGC...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACCCAGGATGAGGCTCTaGTCACTCTCTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKPRMRL*SLSASA
Trigger: GGCGCTGGCAGAGAGTGAGCAGAGCCTCATCCTGGG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATCCGCTGCTCCTTCTaGTCCTCCACCTCGGACTTC +
Preference number: 4 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQIRCSF*SSTSDF
Trigger: GAAGTCCGAGGTGGAGGAGCAGAAGGAGCAGCGGAT...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGAGGGATCGCATCCGCTaGTCCTTCTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWRDRIR*SFCSST
Trigger: GGTGGAGGAGCAGAAGGAGCAGCGGATGCGATCCCT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAGACATAAAGACTCTATaGAGAAACCTCCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: REKSQNQESAPFPALPPKDIKTL*RNLLNF
Trigger: AAAGTTGAGGAGGTTTCTGCATAGAGTCTTTATGTC...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGATGGGCAGCCTCACTaGTGGCCTCTCAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWDGQPH*WPLSGC
Trigger: GCAACCACTGAGAGGCCAGCAGTGAGGCTGCCCATC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACCTCTAAAATATTGCTaGAGGCTCAGAGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGPLKYC*RLREDL
Trigger: TAAGTCTTCTCTGAGCCTGCAGCAATATTTTAGAGG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCTTCCCATTTTCATCTaGTCCCAACTGGTTCATGAT +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFLPIFI*SQLVHD
Trigger: ATCATGAACCAGTTGGGAGCAGATGAAAATGGGAAG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAAGTGTCGTTCGCTCCTaGACATCCTCATGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAASVVRS*TSSCSL
Trigger: GAGAGAGCATGAGGATGTCCAGGAGCGAACGACACT...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGACTGGTTGTGCTGGTGTaGCTGTTGGAGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRIYKGSVLPVVSGIYGGLVVLV*LLEERL
Trigger: GAGCCTTTCCTCCAACAGCCACACCAGCACAACCAG...TCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp CGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGACGCAACTACTGGCTGTaGAGCTGGTTGTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RRIYKGSVLPVVSGIYGGRNYWL*SWLCWC
Trigger: ACACCAGCACAACCAGCTCCACAGCCAGTAGTTGCG...TCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCAGGCACAGTCCTGGTaGTGGTCTGTTTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMQAQSW*WSVCNF
Trigger: AAAGTTACAAACAGACCACCACCAGGACTGTGCCTG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAACAAATGCACCCATGTaGAAGAGATTTGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGTNAPM*KRFDSA
Trigger: TGCTGAATCAAATCTCTTCCACATGGGTGCATTTGT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGTGTGATTTGCACAGTTaGTTTTGTTTGCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QRSPLMAASILKLRPGTWCDLHS*FCLPQS
Trigger: GGACTGAGGCAAACAAAACCAACTGTGCAAATCACA...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAAACTCATCTTCCTCCCTaGTGGTGGTGCCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQETHLPP*WWCLAD
Trigger: GTCTGCAAGGCACCACCATCAGGGAGGAAGATGAGT...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAGATGGCAGATCCGTGTaGGTAGAGTGTTTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRDGRSV*VECLEN
Trigger: ATTTTCCAAACACTCTACTCACACGGATCTGCCATC...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGATGGCAGATCCGTGTaGGTAGAGTGTTTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMDGRSV*VECLEN
Trigger: ATTTTCCAAACACTCTACTCACACGGATCTGCCATC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAATGCAAATACAAGAACTaGGGCAGCAGGGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQCKYKN*GSRAVR
Trigger: CCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCA...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACGGAGAGGCTGCAGCTaGTCTTCTTCCTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKRRGCS*SSSCRR
Trigger: TCTGCGGCAGGAAGAAGAGCAGCTGCAGCCTCTCCG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTTGTCATTGCTGCTGCTaGTTGTGCTCAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HLLRYLRMACISYANTRTCHCCC*LCSAPQ
Trigger: CTGGGGAGCTGAGCACAAGCAGCAGCAGCAATGACA...AGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTCATCCTCTCGGCATTaGTTTTACATTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMSSSRH*FYIPPR
Trigger: CCTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAATTTTCCCACCAGCATaGTCATCCTCTCGGCATTGC +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAAIFPPA*SSSRHC
Trigger: GCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAAT...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp CGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGAGAGGATCGATGTGGATaGTTTCCAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: RRIYKGSVLPVVSGIYGGEDRCG*FPAPAW
Trigger: CCATGCTGGAGCTGGAAAGCATCCACATCGATCCTC...TCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTGCCAGGTTTGTCTTTaGTGCCGCTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQCQVCL*CRCWWS
Trigger: GCTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGTCCAGAGCTACAAATaGACCCATGTGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMVQSYK*THVEEI
Trigger: AATCTCTTCCACATGGGTGCATTTGTAGCTCTGGAC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCCTCTAAAATATTGCTaGAGGCTCAGAGAAGACTTA +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFPLKYC*RLREDL
Trigger: TAAGTCTTCTCTGAGCCTGCAGCAATATTTTAGAGG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAACTCCGGCCCTACCTTaGCAGGTTTGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQTPALP*QVCLCC
Trigger: GCAGCAAAGACAAACCTGGCAAGGTAGGGCCGGAGT...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGTAACCATGGTAGACTaGTTTTCGGGGATAGAGACA +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMVTMVD*FSGIET
Trigger: TGTCTCTATCCCCGAAAACCAGTCTACCATGGTTAC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCACTTTGCTGCACAGCATaGCAGTCAGGCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAALCCTA*QSGSHS
Trigger: AGAATGAGAGCCTGACTGCCATGCTGTGCAGCAAAG...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTGCTGGTGTGGCTGTTaGAGGAAAGGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQCWCGC*RKGSPR
Trigger: CCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTGCTGGTGTGGCTGTTaGAGGAAAGGCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWCWCGC*RKGSPR
Trigger: CCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAATACTGGCTGTGGAGCTaGTTGTGCTGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEYWLWS*LCWCGC
Trigger: ACAGCCACACCAGCACAACCAGCTCCACAGCCAGTA...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGACAGAAACAAATGTCTaGGATCCCACTGATGCACAG +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMTETNV*DPTDAQ
Trigger: CTGTGCATCAGTGGGATCCCAGACATTTGTTTCTGT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGCACAGTCCTGGTGGTaGTCTGTTTGTAACTTTAGT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMAQSWW*SVCNFS
Trigger: ACTAAAGTTACAAACAGACCACCACCAGGACTGTGC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTCTCCGAACTGGTGGCTaGAGTATCCTCCAGCGAACA +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCLRTGG*SILQRT
Trigger: TGTTCGCTGGAGGATACTCCAGCCACCAGTTCGGAG...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGGGCAGCCTCACTGCTaGCCTCTCAGTGGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWGQPHC*PLSGCF
Trigger: AAAGCAACCACTGAGAGGCCAGCAGTGAGGCTGCCC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAATGATTTCTTCCTCTTaGTCACATGCAAAATCTCAC +
Preference number: 4 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGMISSS*SHAKSH
Trigger: GTGAGATTTTGCATGTGACCAAGAGGAAGAAATCAT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CAA 72 bp GGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTaGATTCAGCAGAACAGCAATTATGTAGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GPELQMHPCGRD*IQQNSNYVVPW
Trigger: CCAGGGCACTACATAATTGCTGTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGACTCATCTTCCTCCCTaGTGGTGGTGCCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQTHLPP*WWCLAD
Trigger: GTCTGCAAGGCACCACCATCAGGGAGGAAGATGAGT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGACGAATGGCGTTGGTaGACTCCGCAGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIDEWRW*TPQPAH
Trigger: ATGAGCTGGCTGCGGAGTTCACCAACGCCATTCGTC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGGGGGAGAGTGAGTGCTaGAAGCAGAAACGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQGESEC*KQKRGS
Trigger: AGAGCCTCGTTTCTGCTTTCAGCACTCACTCTCCCC...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGCAAGTCATTTCTGCTaGTGTATCCGTCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWASHFC*CIRPRR
Trigger: GCGACGGGGACGGATACATCAGCAGAAATGACTTGC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR GCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTTCACCCAGGACAGTTaGGAAGCGCAAACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCFTQDS*EAQTED
Trigger: ATCCTCCGTTTGCGCTTCGCAACTGTCCTGGGTGAA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCGTTCCCTCTCTGTTTaGTGGAGACGTTTATTAAGT +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMRSLSV*WRRLLS
Trigger: ACTTAATAAACGTCTCCAGCAAACAGAGAGGGAACG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGTGAGCTGCTCAATGTaGTTGTCCACCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIVSCSM*LSTSAT
Trigger: CGTGGCCGAGGTGGACAAGCACATTGAGCAGCTCAC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACTGGCTGTGGTGAGCTaGTCAATGTGCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQILAVVS*SMCLST
Trigger: GGTGGACAAGCACATTGAGCAGCTCACCACAGCCAG...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCATCCGCTGCTCCTTCTaGTCCTCCACCTCGGACTTC +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIIRCSF*SSTSDF
Trigger: GAAGTCCGAGGTGGAGGAGCAGAAGGAGCAGCGGAT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGAGGGATCGCATCCGCTaGTCCTTCTGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWRDRIR*SFCSST
Trigger: GGTGGAGGAGCAGAAGGAGCAGCGGATGCGATCCCT...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp GGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATTGCCAGGTTTGTCTTTaGTGCCGCTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GKRRIYKGSVLPVVSGIYCQVCL*CRCWWS
Trigger: GCTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCA...ATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGCAGGATTTTATTCCTaGTTCAGCCACATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMAGFYS*FSHMFL
Trigger: CAGAAACATGTGGCTGAAGCAGGAATAAAATCCTGC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTTCCTCCTACAGAGTTaGCAATGTGCGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCFLLQS*QCAGTV
Trigger: CACAGTCCCCGCACATTGGCAACTCTGTAGGAGGAA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATCGGAGCTTAAGAGTTaGACTTCACAGGCTCAATAT +
Preference number: 4 (lower is better)
Translates to: QIFVAGKLTLMALATTDRSELKS*TSQAQY
Trigger: ATATTGAGCCTGTGAAGTCCAACTCTTAAGCTCCGA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CCA 90 bp CACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTACCTCGTGTTGGCTCTaGCTGAGTTCTGATCGCAGT +
Preference number: 4 (lower is better)
Translates to: HLLRYLRMACISYANTRTTSCWL*LSSDRS
Trigger: ACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGT...AGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAATCTCTTCAGCCAGGTTaGGATACAGGTCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQSLQPG*DTGPGQ
Trigger: TTGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGA...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACTCTTGCTTTCTGAGATaGCAGATCCGTGTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNSCFLR*QIRVSR
Trigger: TCTACTCACACGGATCTGCCATCTCAGAAAGCAAGA...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTTACTGGCTGTGGAGCTaGTTGTGCTGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RIYKGSVLPVVSGIYGGFYWLWS*LCWCGC
Trigger: ACAGCCACACCAGCACAACCAGCTCCACAGCCAGTA...AAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTCATTGGTGTGTGGCCTaGAGTTCTCCTCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCHWCVA*SSPPLA
Trigger: TGCTAGAGGAGGAGAACTCCAGGCCACACACCAATG...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCTCCCAACAAGTACATaGGCCCTTCTGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWLPTST*ALLSPV
Trigger: CACTGGGGACAGAAGGGCCCATGTACTTGTTGGGAG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWPQGLS*GTPLSK
Trigger: CTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTCCACAATGTCACCATaGCCAGTCGCCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQSTMSP*PVAPRV
Trigger: AACCCTTGGGGCGACTGGCCATGGTGACATTGTGGA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGAGGTGGGTGGATCAGTaGTCAGGAGTTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWRWVDQ*SGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCACTGATCCACCCACCT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTATAGGCTGTTCCCACTaGATAAGAAAATTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFIGCSH*IRKFAV
Trigger: TACAGCAAATTTTCTTATCCAGTGGGAACAGCCTAT...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATATATGCTACTGATTTCTaGGCCCAGGACTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIYATDF*AQDWPI
Trigger: GATCGGCCAGTCCTGGGCTCAGAAATCAGTAGCATA...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTATGCTACTGATTTCTaGGCCCAGGACTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWYATDF*AQDWPI
Trigger: GATCGGCCAGTCCTGGGCTCAGAAATCAGTAGCATA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAATATTGGAGCAGTCCTaGAGTGAGTGGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQILEQS*SEWARC
Trigger: ACACCTGGCCCACTCACTTCAGGACTGCTCCAATAT...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGCCAGCATGGTCAGCTTaGCCGCAGCCCTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWPAWSA*PQPCHS
Trigger: AGAATGACAGGGCTGCGGTCAAGCTGACCATGCTGG...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR TCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAGCAAAAATGTATGGTaGTCTGCATGTGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMSKNVW*SACETV
Trigger: GACAGTTTCACATGCAGATCACCATACATTTTTGCT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAAAGCTGCTCTTCTTCCTaGCGCAGACAACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQESCSSS*RRQHSP
Trigger: TGGAGAATGTTGTCTGCGGCAGGAAGAAGAGCAGCT...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAGGATCGATGTGGATaGTTTCCAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQEDRCG*FPAPAW
Trigger: CCATGCTGGAGCTGGAAAGCATCCACATCGATCCTC...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGATCCGCTGCTCCTTCTaGTCCTCCACCTCGGACTTC +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWIRCSF*SSTSDF
Trigger: GAAGTCCGAGGTGGAGGAGCAGAAGGAGCAGCGGAT...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTTGATGCTTTTTCTTTaGTTTCTCATAGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMLMLFL*FLIGSH
Trigger: GTGGCTGCCTATGAGAAAGCAAAGAAAAAGCATCAA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTGGAAACCAAAGCCTTaGTGTAGTAAACAAATCAGC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMWKPKP*CSKQIS
Trigger: GCTGATTTGTTTACTACAGCAAGGCTTTGGTTTCCA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGATGCACATCCCACTTTaGTCAGGGGAGGACGTTTCC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWMHIPL*SGEDVS
Trigger: GGAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCAT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAATCGTTGACCTCGTGTTaGCTCTGGCTGAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQSLTSC*LWLSSD
Trigger: ATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGA...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACAGCAATCTTGGCGATaGGAATGTCATTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEQQSWR*ECHCCC
Trigger: GCAGCAGCAATGACATTCCCATCGCCAAGATTGCTG...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCTGGTTGTGCTGGTGTaGCTGTTGGAGGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYILVVLV*LLEERL
Trigger: GAGCCTTTCCTCCAACAGCCACACCAGCACAACCAG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATATGGAGCTGGTTGTGCTaGTGTGGCTGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIWSWLC*CGCWRK
Trigger: TTTCCTCCAACAGCCACACCAGCACAACCAGCTCCA...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp AGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTTGGAGCTGGTTGTGCTaGTGTGGCTGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RIYKGSVLPVVSGIYGGFWSWLC*CGCWRK
Trigger: TTTCCTCCAACAGCCACACCAGCACAACCAGCTCCA...AAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTGCAGTTTACTTCCCATaGGCAGAACTCCGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFAVYFP*AELRCV
Trigger: CACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGC...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACCCCAAGGGTTGAGTTaGGGCACTCCATTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKPQGLS*GTPLSK
Trigger: CTTGGACAATGGAGTGCCCCAACTCAACCCTTGGGG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTTGAGACCCGGGACTTaGAAACCAAAGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCLRPGT*KPKPCC
Trigger: ACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTATTTGTAGTCAGCTATaGCAATGGAACACATTTTTC +
Preference number: 4 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFICSQL*QWNTFF
Trigger: GAAAAATGTGTTCCATTGCCATAGCTGACTACAAAT...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAAGGTGGGTGGATCAGTaGTCAGGAGTTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKRWVDQ*SGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCACTGATCCACCCACCT...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAATTCTGAACAGAGATaGTTACTGACTAAAAGGGGG +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMNSEQR*LLTKRG
Trigger: CCCCCTTTTAGTCAGTAACCATCTCTGTTCAGAATT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTATTCCCAGCTCTCCCTaGCTGCTGATAAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFIPSSP*LLIRHP
Trigger: TGGGTGCCTTATCAGCAGCCAGGGAGAGCTGGGAAT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCAGGCAGTCCAATCTTaGTCGGGTAACTACGGTGCA +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIQAVQS*SGNYGA
Trigger: TGCACCGTAGTTACCCGATCAAGATTGGACTGCCTG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGGACTGCTCGCACTGTaGCTTGGCCAATTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWGLLAL*LGQFLF
Trigger: GAAAAGAAATTGGCCAAGGCACAGTGCGAGCAGTCC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAACTGATGGTGGTGCCTTaGAGACGGTCTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQLMVVP*RRSIFL
Trigger: CAAGAAGATAGACCGTCTGCAAGGCACCACCATCAG...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKPVSTL*SSEFRS
Trigger: TGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGAGCTGCTCTTCTTCCTaGCGCAGACAACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQSCSSS*RRQHSP
Trigger: TGGAGAATGTTGTCTGCGGCAGGAAGAAGAGCAGCT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAGAATGTCATTGCTGCTaGTGCTTGTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKECHCC*CLCSAP
Trigger: GGGAGCTGAGCACAAGCAGCAGCAGCAATGACATTC...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCGAGGATCGATGTGGATaGTTTCCAGCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIEDRCG*FPAPAW
Trigger: CCATGCTGGAGCTGGAAAGCATCCACATCGATCCTC...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATGGATCATATCACCTTaGCAGGTTTGTCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRIYKGSVLPVVSGIYGGWIISP*QVCLCC
Trigger: GCAGCAAAGACAAACCTGGCAAGGTGATATGATCCA...TCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCATCGGAGCTTAAGAGTTaGACTTCACAGGCTCAATAT +
Preference number: 4 (lower is better)
Translates to: RYLRMACISYANTRTEAASELKS*TSQAQY
Trigger: ATATTGAGCCTGTGAAGTCCAACTCTTAAGCTCCGA...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTACAGAGGTCTGGTCTTaGTCCATGCTTCGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFTEVWS*SMLRES
Trigger: GGACTCTCGAAGCATGGACCAAGACCAGACCTCTGT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACCCTCTCAGCAATCTTaGCGATGGGAATGTCATTGC +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIPSQQS*RWECHC
Trigger: GCAATGACATTCCCATCGCCAAGATTGCTGAGAGGG...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTTCAGCGCTGTGGCATTaGATTCGTATTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: HLLRYLRMACISYANTRTSALWH*IRIFPP
Trigger: TGGTGGGAAAATACGAATCCAATGCCACAGCGCTGA...AGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAACCAGCCTCAGCGCTGTaGCATTGGATTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQPASAL*HWIRIF
Trigger: GAAAATACGAATCCAATGCCACAGCGCTGAGGCTGG...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATGGAGCTGGTTGTGCTaGTGTGGCTGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKWSWLC*CGCWRK
Trigger: TTTCCTCCAACAGCCACACCAGCACAACCAGCTCCA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACTGAGAGGATCGATGTaGATGCTTTCCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKLRGSM*MLSSSS
Trigger: GCTGGAGCTGGAAAGCATCCACATCGATCCTCTCAG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp TGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGCTGAGAGGATCGATGTaGATGCTTTCCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CIGENVEYIRVQYYLWFQLRGSM*MLSSSS
Trigger: GCTGGAGCTGGAAAGCATCCACATCGATCCTCTCAG...CTGAAACCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGAAGAGCGGGCACCTCTaGATACAGTCCACAATGTCA +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWKSGHL*IQSTMS
Trigger: TGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTTGAGACCCGGGACTTaGAAACCAAAGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWLRPGT*KPKPCC
Trigger: ACAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGATGATTTCTTCCTCTTaGTCACATGCAAAATCTCAC +
Preference number: 4 (lower is better)
Translates to: DSAEQQLCSALGREVLIMMISSS*SHAKSH
Trigger: GTGAGATTTTGCATGTGACCAAGAGGAAGAAATCAT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
3UTR CAA 72 bp GGAAATATATTCCAAGGGAACTGTGAAATGGGTCCTTaGGCTCTGTGCCCATTTCTTCAAAAGCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: GNIFQGNCEMGP*ALCPFLQKPKT
Trigger: AGTCTTTGGCTTTTGAAGAAATGGGCACAGAGCCAAAGGACCCATTTCACAGTTCCCTTGGAATATATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGGTCATTTTGGGATTTaGGGTGCTCAATCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWGHFGI*GAQSGY
Trigger: ATAGCCGGATTGAGCACCTCAAATCCCAAAATGACC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAACAGCCCTGTCATTCTTaGGCTGCTGGATATAATCCT +
Preference number: 4 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQQPCHS*AAGYNP
Trigger: AGGATTATATCCAGCAGCTCAAGAATGACAGGGCTG...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTCTACGCTCTTCCCATaGCCTATAACTCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQSTLFP*PITPRD
Trigger: ATCTCTGGGAGTTATAGGTCATGGGAAGAGCGTAGA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAACTCTGTCCCCGTCATaGCAACAGGAGCTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKTLSPS*QQELSL
Trigger: AAGACTTAGCTCCTGTTGTCATGACGGGGACAGAGT...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTCAGTGATGCTGTGGTaGCAGCAGTCAGCATTATTT +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCSVMLW*QQSALF
Trigger: AAATAATGCTGACTGCTGTCACCACAGCATCACTGA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGAGTACGGCATCAGTGTaGATGTGGGGGAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQSTASV*MWGKFV
Trigger: CACAAATTTCCCCCACATTCACACTGATGCCGTACT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAAATTTTCCCACCAGCATaGTCATCCTCTCGGCATTGC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKIFPPA*SSSRHC
Trigger: GCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAAT...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATCTCCTGCATAAGCACTaGGTTTTCCAGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GKRRIYKGSVLPVVSGIYLLHKH*VFQIQP
Trigger: AGGCTGGATCTGGAAAACGCAGTGCTTATGCAGGAG...ATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR GCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTATGGCCATGAGCTCCTaGATAAGCACTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFMAMSS*ISTAFS
Trigger: GGAAAACGCAGTGCTTATGCAGGAGCTCATGGCCAT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAAGTCAGGAGGTCATTTTaGGATTTGAGGTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEVRRSF*DLRCSI
Trigger: GATTGAGCACCTCAAATCCCAAAATGACCTCCTGAC...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTCAGCGCTGTGGCATTaGATTCGTATTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWSALWH*IRIFPP
Trigger: TGGTGGGAAAATACGAATCCAATGCCACAGCGCTGA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTCCAGCCTCAGCGCTGTaGCATTGGATTCGTATTTTC +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFPASAL*HWIRIF
Trigger: GAAAATACGAATCCAATGCCACAGCGCTGAGGCTGG...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACCACCAGGTTGCTGTTaGCCCGCTTTAGATCATTCA +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKPPGCC*PALDHS
Trigger: TGAATGATCTAAAGCGGGCCAACAGCAACCTGGTGG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCAAGAGCGGGCACCTCTaGATACAGTCCACAATGTCA +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIKSGHL*IQSTMS
Trigger: TGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTACCTGGAGCAAGAATaGAGACAGAAGTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWYLEQE*RQKSVG
Trigger: GCCTACTGACTTCTGTCTCCATTCTTGCTCCAGGTA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATCTACGCTCTTCCCATaGCCTATAACTCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKSTLFP*PITPRD
Trigger: ATCTCTGGGAGTTATAGGTCATGGGAAGAGCGTAGA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCTGGTCCTTCTAGACTaGTACCAGTTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWLVLLD*YQLICC
Trigger: ACAACAGATCAACTGGTATCAGTCTAGAAGGACCAG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGATGGCCATGAGCTCCTaGATAAGCACTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWMAMSS*ISTAFS
Trigger: GGAAAACGCAGTGCTTATGCAGGAGCTCATGGCCAT...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACAGGCACAGTCCTGGTaGTGGTCTGTTTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKQAQSW*WSVCNF
Trigger: AAAGTTACAAACAGACCACCACCAGGACTGTGCCTG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATCATCTGCTCCCAACTaGTTCATGATCTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKSSAPN*FMISAT
Trigger: TGTGGCTGAGATCATGAACCAGTTGGGAGCAGATGA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CCA 90 bp AGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTGTTCAGTATTACCTGTaGTTTCAGGCATCTATGGGG +
Preference number: 4 (lower is better)
Translates to: RIYKGSVLPVVSGIYGGFVQYYL*FQASMG
Trigger: CCCCATAGATGCCTGAAACCACAGGTAATACTGAAC...AAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR TCA 90 bp TATGTATGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGCAGCCCTGTCATTCTTaGGCTGCTGGATATAATCCT +
Preference number: 4 (lower is better)
Translates to: YVCIGENVEYIRVQYYLWQPCHS*AAGYNP
Trigger: AGGATTATATCCAGCAGCTCAAGAATGACAGGGCTG...CCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACATACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCCAAAGACTGAATTCTaGACAGAGATGGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWPKTEF*TEMVTD
Trigger: GTCAGTAACCATCTCTGTTCAGAATTCAGTCTTTGG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTATTTTAACAGCCACTaGGAGATCAGTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWYFNSH*EISDAV
Trigger: CACAGCATCACTGATCTCTCAGTGGCTGTTAAAATA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTATGACTGTGGAAAGATaGAGTACTAGTCAAGGATGT +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCMTVER*STSQGC
Trigger: ACATCCTTGACTAGTACTTCATCTTTCCACAGTCAT...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGATCATTCACGAACTCTaGAGATTGCTGATGTCGGAT +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWIIHEL*RLLMSD
Trigger: ATCCGACATCAGCAATCTGCAGAGTTCGTGAATGAT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR GCA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTGGAAACCAAAGCCTTaGTGTAGTAAACAAATCAGC +
Preference number: 4 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCWKPKP*CSKQIS
Trigger: GCTGATTTGTTTACTACAGCAAGGCTTTGGTTTCCA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAATACCTACGAATGGCCTaGATTTCCTATGCAAATACA +
Preference number: 4 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEYLRMA*ISYANT
Trigger: TGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTCAATATCCACTGCTTaGTCCCTTCTGCCACATTTT +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWSISTA*SLLPHF
Trigger: AAAATGTGGCAGAAGGGACCAAGCAGTGGATATTGA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CCA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTCCCTCTCTGTTTGCTaGAGACGTTTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWSLSVC*RRLLSS
Trigger: GGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAAAATCTCTTGGATATTaGAGCAGTCCTGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQKSLGY*SSPEVS
Trigger: ACTCACTTCAGGACTGCTCCAATATCCAAGAGATTT...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATCTTGCTTTCTGAGATaGCAGATCCGTGTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKSCFLR*QIRVSR
Trigger: TCTACTCACACGGATCTGCCATCTCAGAAAGCAAGA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCAGTCCTTTTAAATGCTaGAGGCACACACAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYISPFKC*RHTQVC
Trigger: ACAGACCTGTGTGTGCCTCCAGCATTTAAAAGGACT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGGCCTCAGTCCAACAATaGGAAATATATTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQASVQQ*EIYSKG
Trigger: TCCCTTGGAATATATTTCCCATTGTTGGACTGAGGC...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTCCAAAGACTGAATTCTaGACAGAGATGGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFPKTEF*TEMVTD
Trigger: GTCAGTAACCATCTCTGTTCAGAATTCAGTCTTTGG...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCTATTTTAACAGCCACTaGGAGATCAGTGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIYFNSH*EISDAV
Trigger: CACAGCATCACTGATCTCTCAGTGGCTGTTAAAATA...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTATGGTGATCTGCATGTaGAACTGTCTTTCTCTACAC +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFMVICM*NCLSLH
Trigger: GTGTAGAGAAAGACAGTTTCACATGCAGATCACCAT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGAGCAAAAATGTATGGTaGTCTGCATGTGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQSKNVW*SACETV
Trigger: GACAGTTTCACATGCAGATCACCATACATTTTTGCT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR TCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCTTGCTTTGTTCTGCTaGGCTGATATTTCACCTGAT +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYILALFC*ADISPD
Trigger: ATCAGGTGAAATATCAGCTCAGCAGAACAAAGCAAG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCATCATTCACGAACTCTaGAGATTGCTGATGTCGGAT +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIIIHEL*RLLMSD
Trigger: ATCCGACATCAGCAATCTGCAGAGTTCGTGAATGAT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCACAGTTGGTTTTGTTTaGCTCAGTCCAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: ASSVNSIRVLKGESNLYITVGFV*LSPTMG
Trigger: TCCCATTGTTGGACTGAGGCAAACAAAACCAACTGT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTACAGTTGGTTTTGTTTaGCTCAGTCCAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFTVGFV*LSPTMG
Trigger: TCCCATTGTTGGACTGAGGCAAACAAAACCAACTGT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATCCCTCTCTGTTTGCTaGAGACGTTTATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKSLSVC*RRLLSS
Trigger: GGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGACAAATGCACCCATGTaGAAGAGATTTGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQTNAPM*KRFDSA
Trigger: TGCTGAATCAAATCTCTTCCACATGGGTGCATTTGT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTTGTTTCAGGCAGCATaGATATTAACTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQLFQAA*ILTSER
Trigger: GCGTTCTGAAGTTAATATCCATGCTGCCTGAAACAA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATATTAGATACCTACGAATaGCCTGCATTTCCTATGCAA +
Preference number: 4 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQILDTYE*PAFPMQ
Trigger: TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAA...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CCA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTTTTCATAGGGAACTTTaGATGGATTCTCTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFFHREL*MDSLVL
Trigger: TAGCACCAGAGAATCCATCCAAAGTTCCCTATGAAA...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CCA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATTGTTTCAGGCAGCATaGATATTAACTTCAGAACGC +
Preference number: 4 (lower is better)
Translates to: KMSPASTKKRIQWKILQKLFQAA*ILTSER
Trigger: GCGTTCTGAAGTTAATATCCATGCTGCCTGAAACAA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR GCA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGAACAATACTGACAAATaGAAACTTAGTCACATGTGC +
Preference number: 4 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQNNTDK*KLSHMC
Trigger: GCACATGTGACTAAGTTTGCATTTGTCAGTATTGTT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS GCA 90 bp GCTGCCGCCGCCGCCGCCGCCGCTGCTGGAGCTCCCCGCAGCCGCTaGCGCCGCGGCCGCCATCATGCGCCCGCTCCCTACTTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAAGAPRSR*RRGRHHAPAPYLGG
Trigger: TCCTCCCAAGTAGGGAGCGGGCGCATGATGGCGGCCGCGGCGGCAGCGGCTGCGGGGAGCTCCAGCAGCGGCGGCGGCGGCGGCGGCAGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp CCTCGCCGGTGCTGGACGTGTCGCTGCTGCTGCTGCTGCTGCCGCTaGCGCCGCCGCCGCCGCCGCTGCTGGAGCTCCCCGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PRRCWTCRCCCCCCR*RRRRRRCWSSPQPL
Trigger: CAGCGGCTGCGGGGAGCTCCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp GGCGCCGCATCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTaGTGCTGCTGCTGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAASSPPRRCWTCRC*CCCCRCRRRRRRCW
Trigger: CCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCC
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp TCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTGCTGCTGCTGCTaGCGCTGCCGCCGCCGCCGCCGCCGCTGCTGGAGCTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: SPPRRCWTCRCCCCC*RCRRRRRRCWSSPQ
Trigger: CTGCGGGGAGCTCCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp TCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTGCTGCTGCTaGTGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTGGAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSPPRRCWTCRCCCC*CRCRRRRRRCWSSP
Trigger: CGGGGAGCTCCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp GCCGCATCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTGCTaGTGCTGCTGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: AASSPPRRCWTCRCC*CCCRCRRRRRRCWS
Trigger: GCTCCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGC
77% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp AGAGGCGCCGCATCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTaGTGCTGCTGCTGCTGCCGCTGCCGCCGCCGCCGCCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RGAASSPPRRCWTCR*CCCCCRCRRRRRRC
Trigger: GCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCT
77% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS CCA 90 bp CGTGGCTCGCGTTTCACGGACGAGCCATTGCTGCAGGAGGCTCGGTaGCGCGGCGCGCTCGCAGCTGCGGCAGCGGCGGAGCCCGCGCGG +
Preference number: 5 (lower is better)
Translates to: RGSRFTDEPLLQEAR*RGALAAAAAAEPAR
Trigger: CCGCGCGGGCTCCGCCGCTGCCGCAGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS GCA 90 bp GCATCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTGCTGCTaGTGCTGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ASSPPRRCWTCRCCC*CCRCRRRRRRCWSS
Trigger: GGAGCTCCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGC
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp CAGCTGGAATCCGCGCGGCGCGCAAGCTGCCTGCAGCCCCGAACTTaGCTGACAACGGAGCATGCCCAGTGGCCGCCGGGGCGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: QLESARRASCLQPRT*LTTEHAQWPPGRSG
Trigger: CCCGGAGCGCCCCGGCGGCCACTGGGCATGCTCCGTTGTCAGGCAAGTTCGGGGCTGCAGGCAGCTTGCGCGCCGCGCGGATTCCAGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CCA 90 bp CGCACGTCTGGAAGAGGCGCCGCATCCTCTCCTCCTCGCCGGTGCTaGACGTGTCGCTGCTGCTGCTGCTGCTGCCGCTGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RTSGRGAASSPPRRC*TCRCCCCCCRCRRR
Trigger: GCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCTTCCAGACGTGCG
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp CGTCGCACGTCTGGAAGAGGCGCCGCATCCTCTCCTCCTCGCCGGTaGTGGACGTGTCGCTGCTGCTGCTGCTGCTGCCGCTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RRTSGRGAASSPPRR*WTCRCCCCCCRCRR
Trigger: GCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCTTCCAGACGTGCGACG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 90 bp GGCCGCCGGGGCGCTCCGGGCGAGGGATTCCACCTCTCCGGGTTTTaGCCGGACTGGGAAGATGGGCGCTCTGGAATCGCCCGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GRRGAPGEGFHLSGF*PDWEDGRSGIARGG
Trigger: GCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCCCGGAGCGCCCCGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 90 bp CCCGACTGGTCTCCAGGGGAGGACCCCACGCCCGCCGCTCGGAACTaGCCCAGGATGAGGCTCTGCTCACTCTCTGCCAGCGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PDWSPGEDPTPAARN*PRMRLCSLSASARR
Trigger: CCTCCTGGCGCTGGCAGAGAGTGAGCAGAGCCTCATCCTGGGGCAGTTCCGAGCGGCGGGCGTGGGGTCCTCCCCTGGAGACCAGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CCA 90 bp TGCGCCCGCTCCCTACTTGGGAGGAGGAGTACGCGCGACCGCAGCTaGAATCCGCGCGGCGCGCAAGCTGCCTGCAGCCCCGAACTTGCC +
Preference number: 5 (lower is better)
Translates to: CARSLLGRRSTRDRS*NPRGAQAACSPELA
Trigger: GGCAAGTTCGGGGCTGCAGGCAGCTTGCGCGCCGCGCGGATTCCAGCTGCGGTCGCGCGTACTCCTCCTCCCAAGTAGGGAGCGGGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CCA 90 bp GGCGCTCCGGGCGAGGGATTCCACCTCTCCGGGTTTTGCCCGGACTaGGAAGATGGGCGCTCTGGAATCGCCCGAGGAGGCACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GAPGEGFHLSGFCPD*EDGRSGIARGGTSG
Trigger: CCCTGAGGTGCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCCCGGAGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 90 bp TTAAAAAGAGCAGCCGTGGCTCGCGTTTCACGGACGAGCCATTGCTaGAGGAGGCTCGGTGGCGCGGCGCGCTCGCAGCTGCGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: LKRAAVARVSRTSHC*RRLGGAARSQLRQR
Trigger: CCGCTGCCGCAGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACGGCTGCTCTTTTTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS GCA 90 bp TGCTGGTGTGGCTGTTGGAGGAAAGGCTCTCCCAGGGCTGCACGCTaGAGCCGGCCACGGCAAAGGCTCCCCCACAGCTGCCGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CWCGCWRKGSPRAAR*SRPRQRLPHSCRPA
Trigger: AGCTGGACGGCAGCTGTGGGGGAGCCTTTGCCGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS GCA 90 bp CTGGTTGTGCTGGTGTGGCTGTTGGAGGAAAGGCTCTCCCAGGGCTaGACGCTGCAGCCGGCCACGGCAAAGGCTCCCCCACAGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LVVLVWLLEERLSQG*TLQPATAKAPPQLP
Trigger: CGGCAGCTGTGGGGGAGCCTTTGCCGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCACAACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS GCA 90 bp CTCTTAAAAAGAGCAGCCGTGGCTCGCGTTTCACGGACGAGCCATTaGTGCAGGAGGCTCGGTGGCGCGGCGCGCTCGCAGCTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: LLKRAAVARVSRTSH*CRRLGGAARSQLRQ
Trigger: CTGCCGCAGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACGGCTGCTCTTTTTAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS GCA 90 bp AGCCTCTCTCAGCCCCATGCCCAGGAAGGGCCTGACCATTATGGATaGAGCATGCTCACCCTCCTCCGGAGCCGGTCCCGCTCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: SLSQPHAQEGPDHYG*SMLTLLRSRSRSSR
Trigger: CCGGGAAGAGCGGGACCGGCTCCGGAGGAGGGTGAGCATGCTGCATCCATAATGGTCAGGCCCTTCCTGGGCATGGGGCTGAGAGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502648.5
ENST00000505604.1
CDS CCA 90 bp GGGCGAGGGATTCCACCTCTCCGGGTTTTGCCCGGACTGGGAAGATaGGCGCTCTGGAATCGCCCGAGGAGGCACCTCAGGGAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: GRGIPPLRVLPGLGR*ALWNRPRRHLREEG
Trigger: TCCCTCTTCCCTGAGGTGCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CCA 90 bp GTGCATAACCTGCTGATGTATCCGTCCCCGTCGCCGTCGCACGTCTaGAAGAGGCGCCGCATCCTCTCCTCCTCGCCGGTGCTGGACGTG +
Preference number: 5 (lower is better)
Translates to: VHNLLMYPSPSPSHV*KRRRILSSSPVLDV
Trigger: CACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCTTCCAGACGTGCGACGGCGACGGGGACGGATACATCAGCAGGTTATGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 90 bp CTCAGCCCCATGCCCAGGAAGGGCCTGACCATTATGGATGCAGCATaGTCACCCTCCTCCGGAGCCGGTCCCGCTCTTCCCGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: LSPMPRKGLTIMDAA*SPSSGAGPALPGWH
Trigger: ATGCCATCCGGGAAGAGCGGGACCGGCTCCGGAGGAGGGTGAGCATGCTGCATCCATAATGGTCAGGCCCTTCCTGGGCATGGGGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502648.5
ENST00000505604.1
CDS GCA 90 bp GGAGGCAGAATACACTGGAAGCCCCCGGGAAGGGTGTCAGCATTGTaGATCCGGCAACGACGCGGGCCCGGGACACTTGGGGACGCTTCA +
Preference number: 5 (lower is better)
Translates to: GGRIHWKPPGRVSAL*IRQRRGPGTLGDAS
Trigger: TGAAGCGTCCCCAAGTGTCCCGGGCCCGCGTCGTTGCCGGATGCACAATGCTGACACCCTTCCCGGGGGCTTCCAGTGTATTCTGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTGCGCCCGCTCCCTACTaGGGAGGAGGAGTACGCGCG +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPAPAPY*GGGVRA
Trigger: CGCGCGTACTCCTCCTCCCAAGTAGGGAGCGGGCGC...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp AAGTCATTTCTGCTGATGTATCCGTCCCCGTCGCCGTCGCACGTCTaGAAGAGGCGCCGCATCCTCTCCTCCTCGCCGGTGCTGGACGTG +
Preference number: 5 (lower is better)
Translates to: KSFLLMYPSPSPSHV*KRRRILSSSPVLDV
Trigger: CACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCTTCCAGACGTGCGACGGCGACGGGGACGGATACATCAGCAGAAATGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp TCGAGCAGCTTCTGGAGGGCTGACTGGCTCTGCACATCCGGGCTCTaGAGGTCCCTGGCACCAGAGTCGTATTCCCAGCTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SSSFWRADWLCTSGL*RSLAPESYSQLSLA
Trigger: AGCCAGGGAGAGCTGGGAATACGACTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp ATTCCACCTCTCCGGGTTTTGCCCGGACTGGGAAGATGGGCGCTCTaGAATCGCCCGAGGAGGCACCTCAGGGAAGAGGGAGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: IPPLRVLPGLGRWAL*NRPRRHLREEGGGE
Trigger: TTCCCCTCCTCCCTCTTCCCTGAGGTGCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 90 bp GAGCTTCCGCCATACTCGAGCAGCTTCTGGAGGGCTGACTGGCTCTaGACATCCGGGCTCTGGAGGTCCCTGGCACCAGAGTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: ELPPYSSSFWRADWL*TSGLWRSLAPESYS
Trigger: GGAATACGACTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTATGGCGGAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp TCTGGAGGGCTGACTGGCTCTGCACATCCGGGCTCTGGAGGTCCCTaGCACCAGAGTCGTATTCCCAGCTCTCCCTGGCTGCTGATAAGG +
Preference number: 5 (lower is better)
Translates to: SGGLTGSAHPGSGGP*HQSRIPSSPWLLIR
Trigger: CCTTATCAGCAGCCAGGGAGAGCTGGGAATACGACTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp TGCAAAGAGCTTCCGCCATACTCGAGCAGCTTCTGGAGGGCTGACTaGCTCTGCACATCCGGGCTCTGGAGGTCCCTGGCACCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: CKELPPYSSSFWRAD*LCTSGLWRSLAPES
Trigger: CGACTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTATGGCGGAAGCTCTTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS TCA 90 bp CTGATGCAAAGAGCTTCCGCCATACTCGAGCAGCTTCTGGAGGGCTaGCTGGCTCTGCACATCCGGGCTCTGGAGGTCCCTGGCACCAGA +
Preference number: 5 (lower is better)
Translates to: LMQRASAILEQLLEG*LALHIRALEVPGTR
Trigger: TCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTATGGCGGAAGCTCTTTGCATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTGGGTTAATCGGGCGGTaGGTGGAAGTGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPGLIGR*VEVRRP
Trigger: TGGCCGCCTCACTTCCACCAACCGCCCGATTAACCC...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTTCACGGACGAGCCATaGCTGCAGGAGGCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAFTDEP*LQEARW
Trigger: CCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CAA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGAGCTGCTCAATGTGCTaGTCCACCTCGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWSCSMC*STSATE
Trigger: CTCCGTGGCCGAGGTGGACAAGCACATTGAGCAGCT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTCTCTTCAGCCAGGTaGGGATACAGGTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPLSSAR*GYRSRP
Trigger: TGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGTTAATCGGGCGGTaGGTGGAAGTGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSGLIGR*VEVRRP
Trigger: TGGCCGCCTCACTTCCACCAACCGCCCGATTAACCC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGGTTAATCGGGCGGTaGGTGGAAGTGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAGLIGR*VEVRRP
Trigger: TGGCCGCCTCACTTCCACCAACCGCCCGATTAACCC...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CCA 90 bp GGAGCTAAGGGTGGCAACGGGAACACAAGAGGAGGCAGAATACACTaGAAGCCCCCGGGAAGGGTGTCAGCATTGTGCATCCGGCAACGA +
Preference number: 5 (lower is better)
Translates to: GAKGGNGNTRGGRIH*KPPGRVSALCIRQR
Trigger: TCGTTGCCGGATGCACAATGCTGACACCCTTCCCGGGGGCTTCCAGTGTATTCTGCCTCCTCTTGTGTTCCCGTTGCCACCCTTAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCTTCGAGAGTCCTCGTaGACCTCGTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLRESS*TSCWLW
Trigger: CCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTGTGCTGGTGTGGCTGTaGGAGGAAAGGCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: APPPQPSLKTLVALWRYPVLVWL*EERLSQ
Trigger: CTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCAC...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTTGGCTGTGGAGCTGGTaGTGCTGGTGTGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTWLWSW*CWCGCW
Trigger: CCAACAGCCACACCAGCACAACCAGCTCCACAGCCA...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTCCAGCATGGTCAGCTaGACCGCAGCCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDSSMVS*TAALSF
Trigger: GAATGACAGGGCTGCGGTCAAGCTGACCATGCTGGA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATCCAGCATGGTCAGCTaGACCGCAGCCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: EREKSQNQESAPFPALPPSSMVS*TAALSF
Trigger: GAATGACAGGGCTGCGGTCAAGCTGACCATGCTGGA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCACTCCTTGCCAGGTTaGTCTTTGCTGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDHSLPG*SLLPLL
Trigger: CAGCAGCGGCAGCAAAGACAAACCTGGCAAGGAGTG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAA +
Preference number: 5 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRAPRVE*GHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGTTCACGGACGAGCCATaGCTGCAGGAGGCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWFTDEP*LQEARW
Trigger: CCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAA...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGGACAGAGGTCTGGTCTaGGTCCATGCTTCGAGAGTC +
Preference number: 5 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWDRGLV*VHASRV
Trigger: GACTCTCGAAGCATGGACCAAGACCAGACCTCTGTC...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGAAGCTGCTCAATGTGCTaGTCCACCTCGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: FRIQLSALRTGGWSILQRSCSMC*STSATE
Trigger: CTCCGTGGCCGAGGTGGACAAGCACATTGAGCAGCT...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGCGATGGGAATGTCATaGCTGCTGCTGCTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: EREKSQNQESAPFPALPPAMGMS*LLLLVL
Trigger: GAGCACAAGCAGCAGCAGCAATGACATTCCCATCGC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGCTCAGCGCTGTGGCATaGGATTCGTATTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: GPRREERAPLDTVHNVTMLSAVA*DSYFPT
Trigger: GGTGGGAAAATACGAATCCAATGCCACAGCGCTGAG...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTTGCCAGGTTTGTCTTaGCTGCCGCTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRALPGLS*LPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCACTCCTTGCCAGGTTaGTCTTTGCTGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAHSLPG*SLLPLL
Trigger: CAGCAGCGGCAGCAAAGACAAACCTGGCAAGGAGTG...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGATCTCGACGAATGGCGTaGGTGAACTCCGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FRIQLSALRTGGWSILQRSRRMA*VNSAAS
Trigger: GCTGGCTGCGGAGTTCACCAACGCCATTCGTCGAGA...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAGCCACCAGGTTGCTGTaGGCCCGCTTTAGATCATTC +
Preference number: 5 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRATRLL*ARFRSF
Trigger: GAATGATCTAAAGCGGGCCAACAGCAACCTGGTGGC...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTG +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAQSPQG*SWGTPL
Trigger: CAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGATGTGTTTACACGCTGTaGTGGGCCCAGGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRCVYTL*WAQEGR
Trigger: TCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACA...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCATGCACATCCCACTTaGCTCAGGGGAGGACGTTTC +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQHAHPT*LRGGRF
Trigger: GAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCATG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACATGCACATCCCACTTaGCTCAGGGGAGGACGTTTC +
Preference number: 5 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRHAHPT*LRGGRF
Trigger: GAAACGTCCTCCCCTGAGCAAAGTGGGATGTGCATG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS CCA 90 bp TGCACTGCTCGCTGTACTGCAAGGCCAGCCTCAGCGCTGTGGCATTaGATTCGTATTTTCCCACCAGCATGCTCATCCTCTCGGCATTGC +
Preference number: 5 (lower is better)
Translates to: CTARCTARPASALWH*IRIFPPACSSSRHC
Trigger: GCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CCA 90 bp CTTCGATGCACTGCTCGCTGTACTGCAAGGCCAGCCTCAGCGCTGTaGCATTGGATTCGTATTTTCCCACCAGCATGCTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: LRCTARCTARPASAL*HWIRIFPPACSSSR
Trigger: CCGAGAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTGCATCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS-3UTR CAA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTTTTCACCCAGGACAGTaGCGAAGCGCAAACGGAGGA +
Preference number: 5 (lower is better)
Translates to: APPPQPSLKTLVALWRYPFHPGQ*RSANGG
Trigger: TCCTCCGTTTGCGCTTCGCAACTGTCCTGGGTGAAA...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CAA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACTTCGAGAGTCCTCGTaGACCTCGTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FRIQLSALRTGGWSILQRLRESS*TSCWLW
Trigger: CCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGAGCTGCTCAATGTGCTaGTCCACCTCGGCCACGGAG +
Preference number: 5 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVSCSMC*STSATE
Trigger: CTCCGTGGCCGAGGTGGACAAGCACATTGAGCAGCT...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGCGATGGGAATGTCATaGCTGCTGCTGCTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSAMGMS*LLLLVL
Trigger: GAGCACAAGCAGCAGCAGCAATGACATTCCCATCGC...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCTCAGCGCTGTGGCATaGGATTCGTATTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLSAVA*DSYFPT
Trigger: GGTGGGAAAATACGAATCCAATGCCACAGCGCTGAG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTCTCAGCGCTGTGGCATaGGATTCGTATTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPLSAVA*DSYFPT
Trigger: GGTGGGAAAATACGAATCCAATGCCACAGCGCTGAG...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATTCATGAGCAGGGCCTaGGCAGCGTTCTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: REKSQNQESAPFPALPPKFMSRA*AAFSAV
Trigger: GACAGCTGAGAACGCTGCCAAGGCCCTGCTCATGAA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATGGCTGTGGAGCTGGTaGTGCTGGTGTGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGWLWSW*CWCGCW
Trigger: CCAACAGCCACACCAGCACAACCAGCTCCACAGCCA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATCCAGCATGGTCAGCTaGACCGCAGCCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: REKSQNQESAPFPALPPKSSMVS*TAALSF
Trigger: GAATGACAGGGCTGCGGTCAAGCTGACCATGCTGGA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGCATCAGCACACTCCTaGCCAGGTTTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQASAHS*PGLSLL
Trigger: CAGCAAAGACAAACCTGGCAAGGAGTGTGCTGATGC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTGCATCAGCACACTCCTaGCCAGGTTTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPASAHS*PGLSLL
Trigger: CAGCAAAGACAAACCTGGCAAGGAGTGTGCTGATGC...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGATCTCGACGAATGGCGTaGGTGAACTCCGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGSRRMA*VNSAAS
Trigger: GCTGGCTGCGGAGTTCACCAACGCCATTCGTCGAGA...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCGGATTTCACTGCTCTaGGTGAGTCTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQRISLL*VSLSKA
Trigger: TGCCTTGGAGAGACTCACCAAGAGCAGTGAAATCCG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCGGATTTCACTGCTCTaGGTGAGTCTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDRISLL*VSLSKA
Trigger: TGCCTTGGAGAGACTCACCAAGAGCAGTGAAATCCG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CCA 90 bp TTCAGAGCTGGGCTCTCAGTCCCCCAGGTCTCGGAGCTTAAGAGTTaGACTTCACAGGCTCAATATCCACTGCTTGGTCCCTTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: FRAGLSVPQVSELKS*TSQAQYPLLGPFCH
Trigger: GTGGCAGAAGGGACCAAGCAGTGGATATTGAGCCTGTGAAGTCCAACTCTTAAGCTCCGAGACCTGGGGGACTGAGAGCCCAGCTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCGGTCTATCTTCTTGTaGAGCTCCGCAATGACGCTG +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSRSIFL*SSAMTL
Trigger: CAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGAGACGGTCTATCTTCTaGTTGAGCTCCGCAATGACG +
Preference number: 5 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWRRSIF*LSSAMT
Trigger: CGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCT...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGAGACGGTCTATCTTCTaGTTGAGCTCCGCAATGACG +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQRRSIF*LSSAMT
Trigger: CGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCCTGATGGTGGTGCCTaGCAGACGGTCTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTPDGGA*QTVYLL
Trigger: AAGAAGATAGACCGTCTGCAAGGCACCACCATCAGG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCCTGATGGTGGTGCCTaGCAGACGGTCTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSPDGGA*QTVYLL
Trigger: AAGAAGATAGACCGTCTGCAAGGCACCACCATCAGG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCTTCGAGAGTCCTCGTaGACCTCGTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWLRESS*TSCWLW
Trigger: CCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGACAGAGGTCTGGTCTaGGTCCATGCTTCGAGAGTC +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVADRGLV*VHASRV
Trigger: GACTCTCGAAGCATGGACCAAGACCAGACCTCTGTC...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGCTCTCTTCAGCCAGGTaGGGATACAGGTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: QRSPLMAASILKLRPGTWLSSAR*GYRSRP
Trigger: TGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGAG...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTACCCTCTCAGCAATCTaGGCGATGGGAATGTCATTG +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPTLSAI*AMGMSL
Trigger: CAATGACATTCCCATCGCCAAGATTGCTGAGAGGGT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCATTCATGAGCAGGGCCTaGGCAGCGTTCTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPFMSRA*AAFSAV
Trigger: GACAGCTGAGAACGCTGCCAAGGCCCTGCTCATGAA...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGACTGGCCTCTCAGTGGTaGCTTTTAGGATACAGCTGT +
Preference number: 5 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRLASQW*LLGYSC
Trigger: ACAGCTGTATCCTAAAAGCAACCACTGAGAGGCCAG...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATCTGGCCTCTCAGTGGTaGCTTTTAGGATACAGCTGT +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDLASQW*LLGYSC
Trigger: ACAGCTGTATCCTAAAAGCAACCACTGAGAGGCCAG...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCTACCTTGCCAGGTTaGTCTTTGCTGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAFPMQIQELRQQGGEVWPTLPG*SLLPLL
Trigger: CAGCAGCGGCAGCAAAGACAAACCTGGCAAGGTAGG...CCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS TCA 90 bp CGGCCGAGGAGTCGTTTCCATATTTCATGGCAACTCCGGAATTCATaGTGCACTTTTCAGAGCTGGGCTCTCAGTCCCCCAGGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: RPRSRFHISWQLRNS*CTFQSWALSPPGLG
Trigger: TCCGAGACCTGGGGGACTGAGAGCCCAGCTCTGAAAAGTGCATCATGAATTCCGGAGTTGCCATGAAATATGGAAACGACTCCTCGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS TCA 90 bp CTAGATAGCTTCCTCCTACAGAGTTGCCAATGTGCGGGGACTGTGTaGGCAGTTTGTGGAGAGCAGCCTGCTGATGCAAAGAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: LDSFLLQSCQCAGTV*AVCGEQPADAKSFR
Trigger: GCGGAAGCTCTTTGCATCAGCAGGCTGCTCTCCACAAACTGCTCACACAGTCCCCGCACATTGGCAACTCTGTAGGAGGAAGCTATCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp ACCATGGTAGACTGGTTTTCGGGGATAGAGACAGAGGTCTGGTCTTaGTCCATGCTTCGAGAGTCCTCGTTGACCTCGTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: TMVDWFSGIETEVWS*SMLRESSLTSCWLW
Trigger: CCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGACCTCTGTCTCTATCCCCGAAAACCAGTCTACCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS-3UTR CAA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCTCAATATCCACTGCTaGGTCCCTTCTGCCACATTT +
Preference number: 5 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWLNIHC*VPSATF
Trigger: AAATGTGGCAGAAGGGACCAAGCAGTGGATATTGAG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302475.8
CDS-3UTR CAA 90 bp AACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGCCGTTCCCTCTCTGTTaGCTGGAGACGTTTATTAAG +
Preference number: 5 (lower is better)
Translates to: NMCLHAVVGPGGKSGHLWPFPLC*LETFIK
Trigger: CTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGG...CCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCACCGTTCCCTCTCTGTTaGCTGGAGACGTTTATTAAG +
Preference number: 5 (lower is better)
Translates to: EREKSQNQESAPFPALPPPFPLC*LETFIK
Trigger: CTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGG...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCTTCGAGAGTCCTCGTaGACCTCGTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFLRESS*TSCWLW
Trigger: CCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGATTCGGACCTTGTCTTaGATAGCTTCACCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQIRTLS*IASPSQ
Trigger: CTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAAT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATATGACGATTCGGACCTaGTCTTTGATAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDMTIRT*SLIASP
Trigger: GGGTGAAGCTATCAAAGACAAGGTCCGAATCGTCAT...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGAGGTCATTTTGGGATTaGAGGTGCTCAATCCGGCTA +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQRSFWD*RCSIRL
Trigger: TAGCCGGATTGAGCACCTCAAATCCCAAAATGACCT...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCGGATTTCACTGCTCTaGGTGAGTCTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVARISLL*VSLSKA
Trigger: TGCCTTGGAGAGACTCACCAAGAGCAGTGAAATCCG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGCCACCAGGTTGCTGTaGGCCCGCTTTAGATCATTC +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGATRLL*ARFRSF
Trigger: GAATGATCTAAAGCGGGCCAACAGCAACCTGGTGGC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCTTGAGCATCCTCACTaGGGTCTCATGTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVALEHPH*GLMSLH
Trigger: GTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTAGAGCTATTCTTTGCTaGAGCATCCTCACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPRAILC*SILTWV
Trigger: GACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAGAGCTATTCTTTGCTaGAGCATCCTCACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: EREKSQNQESAPFPALPPRAILC*SILTWV
Trigger: GACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCT...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGCCTCTATCTTAAAGTaGAGACCCGGGACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQASILK*RPGTWK
Trigger: TTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS GCA 90 bp TTCTTCCTGCCGCAGACAACATTCTCCAGCCCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCACTGCAGTTGTCCATGTCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: FFLPQTTFSSPVSTL*SSEFRSLQLSMSAV
Trigger: TACTGCTGACATGGACAACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGGGCTGGAGAATGTTGTCTGCGGCAGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS GCA 90 bp TTGGTGTGTGGCCTGGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTaGTTGAGCATCCTCACTTGGGTCTCATGTCTCTCCACCATGGCC +
Preference number: 5 (lower is better)
Translates to: LVCGLEFSSSSRAIL*LSILTWVSCLSTMA
Trigger: GGCCATGGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCAGGCCACACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CCA 90 bp GTCTGGTCTTGGTCCATGCTTCGAGAGTCCTCGTTGACCTCGTGTTaGCTCTGGCTGAGTTCTGATCGCAGTTCTGAGTACTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: VWSWSMLRESSLTSC*LWLSSDRSSEYSSS
Trigger: GGAAGATGAGTACTCAGAACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS-3UTR CAA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCCGTTCCCTCTCTGTTaGCTGGAGACGTTTATTAAG +
Preference number: 5 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTPFPLC*LETFIK
Trigger: CTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTTGCTCGCACTGTGCCTaGGCCAATTTCTTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVACSHCA*ANFFSR
Trigger: TCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGCA...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACGGTCTATCTTCTTGTaGAGCTCCGCAATGACGCTG +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGRSIFL*SSAMTL
Trigger: CAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCCTCATCCTCTCGGCATaGCTTTTACATTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSLILSA*LLHSSK
Trigger: CTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGAG...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGTGCTGGTGTGGCTGTaGGAGGAAAGGCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMVLVWL*EERLSQ
Trigger: CTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCAC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTCACGAACTCTGCAGATaGCTGATGTCGGATTTCACT +
Preference number: 5 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTHELCR*LMSDFT
Trigger: AGTGAAATCCGACATCAGCAATCTGCAGAGTTCGTG...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGACTTGAGCATCCTCACTaGGGTCTCATGTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGLEHPH*GLMSLH
Trigger: GTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAG...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGTTGAGACCCGGGACTaGGAAACCAAAGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QRSPLMAASILKLRPGTWVETRD*ETKALL
Trigger: CAGCAAGGCTTTGGTTTCCAAGTCCCGGGTCTCAAC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TACAGTCCACAATGTCACCATGGCCAGTCGCCCCAAGGGTTGAGTTGGGGCACTGCCTCTATCTTAAAGTaGAGACCCGGGACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: YSPQCHHGQSPQGLSWGTASILK*RPGTWK
Trigger: TTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGC...AGTGCCCCAACTCAACCCTTGGGGCGACTGGCCATGGTGACATTGTGGACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGTATCTCCTCAGTGTCTaGTCCTTAGGTAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: SRHRTCVYTLLWAQEGRAYLLSV*SLGRDR
Trigger: CCTGTCTCTACCTAAGGACAAGACACTGAGGAGATA...CGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGGTTCACCTTCAAGGATaGTGTCTTGGGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQVHLQG*CLGEYL
Trigger: CAAATACTCCCCAAGACACAATCCTTGAAGGTGAAC...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGTTTGCACAGTTGGTTTaGTTTGCCTCAGTCCAACAA +
Preference number: 5 (lower is better)
Translates to: GPRREERAPLDTVHNVTMFAQLV*FASVQQ
Trigger: TTGTTGGACTGAGGCAAACAAAACCAACTGTGCAAA...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTCCCTCACTAAAAACTTaGGTAGCCCTATGGCGGTAC +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAPSLKT*VALWRY
Trigger: GTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGG...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCATATCCCTCAGCTTCTTaGTACAGGAGTTGTCTGACT +
Preference number: 5 (lower is better)
Translates to: EREKSQNQESAPFPALPPYPSAS*YRSCLT
Trigger: AGTCAGACAACTCCTGTACAAAGAAGCTGAGGGATA...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CAA 90 bp GAGAGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAGAGCACATTCTTCCTTaGTGGAGTGTGACTAGAAGT +
Preference number: 5 (lower is better)
Translates to: EREKSQNQESAPFPALPPEHILP*WSVTRS
Trigger: ACTTCTAGTCACACTCCACAAAGGAAGAATGTGCTC...TGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515367.6
CDS TCA 90 bp TGTGTGGCCTGGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTGCTTaGGCATCCTCACTTGGGTCTCATGTCTCTCCACCATGGCCATCA +
Preference number: 5 (lower is better)
Translates to: CVAWSSPPLAELFFA*ASSLGSHVSPPWPS
Trigger: TGATGGCCATGGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCAGGCCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 90 bp TGCTGCAGTTTACTTCCCATGGGCAGAACTCCGGTGCGTGAGTGCTaGTTAAAGCGAAGTTTCATTGGTGTGTGGCCTGGAGTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: CCSLLPMGRTPVREC*LKRSFIGVWPGVLL
Trigger: GAGGAGAACTCCAGGCCACACACCAATGAAACTTCGCTTTAATCAGCACTCACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAGTGTGCTCGCACTGTGCCTaGGCCAATTTCTTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: FPMQIQELRQQGGEVWPVCSHCA*ANFFSR
Trigger: TCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGCA...CACTGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGGTGTGGCCAAGACGGTCTATCTTCTaGTTGAGCTCCGCAATGACG +
Preference number: 5 (lower is better)
Translates to: AFPMQIQELRQQGGEVWPRRSIF*LSSAMT
Trigger: CGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCT...TGGCCACACCTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTCCTGATGGTGGTGCCTaGCAGACGGTCTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFPDGGA*QTVYLL
Trigger: AAGAAGATAGACCGTCTGCAAGGCACCACCATCAGG...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTTCATGAGCAGGGCCTaGGCAGCGTTCTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMFMSRA*AAFSAV
Trigger: GACAGCTGAGAACGCTGCCAAGGCCCTGCTCATGAA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATTGCCAGGTTTGTCTTaGCTGCCGCTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QIFVAGKLTLMALATTDRLPGLS*LPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTTGCCAGGTTTGTCTTaGCTGCCGCTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMLPGLS*LPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAAGTTGGGGCACTCCATaGTCCAAGTGCCGACCTACC +
Preference number: 5 (lower is better)
Translates to: QIFVAGKLTLMALATTDRSWGTP*SKCRPT
Trigger: GGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAGTTGGGGCACTCCATaGTCCAAGTGCCGACCTACC +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMSWGTP*SKCRPT
Trigger: GGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAA +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMAPRVE*GHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATTCTCTCAATACAAAATaGTTCAGGCACAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: HVFTRCCGPRREERAPLDSLNTK*FRHSPG
Trigger: ACCAGGACTGTGCCTGAACAATTTTGTATTGAGAGA...ATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GATGCACAGCCGCCAGACCAGAAGAGGAGGGGGAGAGTGAGTGCTGAAAGCAGAAATGTTTCTCAGCTCTaGAAGAAACCCCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: DAQPPDQKRRGRVSAESRNVSQL*KKPLTE
Trigger: TTCTGTCAGGGGTTTCTTCAAGAGCTGAGAAACATT...TCTGCTTTCAGCACTCACTCTCCCCCTCCTCTTCTGGTCTGGCGGCTGTGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATGTGAAATGGGTCCTTaGGCTCTGTGCCCATTTCTT +
Preference number: 5 (lower is better)
Translates to: REKSQNQESAPFPALPPKCEMGP*ALCPFL
Trigger: AAGAAATGGGCACAGAGCCAAAGGACCCATTTCACA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCCTCTCAGTGGTTGCTTTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGTCCCTCTAAAATATaGCTGCAGGCTCAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: ASQWLLLGYSCLPSELVAGPSKI*LQAQRR
Trigger: TCTTCTCTGAGCCTGCAGCAATATTTTAGAGGGACC...AGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAAAGCAACCACTGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAAAGGCACCCAAACTGTaGTCACTGCTCGTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: QIFVAGKLTLMALATTDRKAPKL*SLLVGQ
Trigger: CTGGCCCACGAGCAGTGACAACAGTTTGGGTGCCTT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS TCA 90 bp TCACGAACTCTGCAGATTGCTGATGTCGGATTTCACTGCTCTTGGTaGGTCTCTCCAAGGCACTCACCAGCTCTTGAACTCTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SRTLQIADVGFHCSW*VSPRHSPALELWPS
Trigger: TGAAGGCCAGAGTTCAAGAGCTGGTGAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAATCCGACATCAGCAATCTGCAGAGTTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS GCA 90 bp CCAGCCTCAGCGCTGTGGCATTGGATTCGTATTTTCCCACCAGCATaGTCATCCTCTCGGCATTGCTTTTACATTCCTCCAAGGTTATGG +
Preference number: 5 (lower is better)
Translates to: PASALWHWIRIFPPA*SSSRHCFYIPPRLW
Trigger: CCATAACCTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CCA 90 bp TGGCAGATCCGTGTGAGTAGAGTGTTTGGAAAATCTCTTGGATATTaGAGCAGTCCTGAAGTGAGTGGGCCAGGTGTTCAGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: WQIRVSRVFGKSLGY*SSPEVSGPGVQPHC
Trigger: GCAGTGTGGCTGAACACCTGGCCCACTCACTTCAGGACTGCTCCAATATCCAAGAGATTTTCCAAACACTCTACTCACACGGATCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAAGGTCATTTTGGGATTaGAGGTGCTCAATCCGGCTA +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGRSFWD*RCSIRL
Trigger: TAGCCGGATTGAGCACCTCAAATCCCAAAATGACCT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGGCCACCAGGTTGCTGTaGGCCCGCTTTAGATCATTC +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMATRLL*ARFRSF
Trigger: GAATGATCTAAAGCGGGCCAACAGCAACCTGGTGGC...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACAGTTGGGGCACTCCATaGTCCAAGTGCCGACCTACC +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNSWGTP*SKCRPT
Trigger: GGTAGGTCGGCACTTGGACAATGGAGTGCCCCAACT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACGCCCCAAGGGTTGAGTaGGGGCACTCCATTGTCCAA +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNAPRVE*GHSIVQ
Trigger: TTGGACAATGGAGTGCCCCAACTCAACCCTTGGGGC...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCAATGTTTCTCAGCTCTaGAAGAAACCCCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSNVSQL*KKPLTE
Trigger: TTCTGTCAGGGGTTTCTTCAAGAGCTGAGAAACATT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTAATAATTCAGTTACTTaGGTACTGCCTAGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPNNSVT*VLPSPV
Trigger: TACAGGGCTAGGCAGTACCAAAGTAACTGAATTATT...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAGGTCCCTCTAAAATATaGCTGCAGGCTCAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGGPSKI*LQAQRR
Trigger: TCTTCTCTGAGCCTGCAGCAATATTTTAGAGGGACC...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GGGCCCAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGAAATTTGTGTATAACTaGCTTTGTTCTGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GPRREERAPLDTVHNVTMKFVYN*LCSAEL
Trigger: CAGCTCAGCAGAACAAAGCAAGTTATACACAAATTT...CATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGGAGGGAAGAGCGGGCACCTCTGGATACAGTCCACAATGTCACCATGGCCAGCCACATGAATTTGACTaGCAAAAAGTGCAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: QEGRAGTSGYSPQCHHGQPHEFD*QKVQKG
Trigger: TCCCTTTTGCACTTTTTGCAAGTCAAATTCATGTGG...CTGGCCATGGTGACATTGTGGACTGTATCCAGAGGTGCCCGCTCTTCCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGCTTCCTCCTACAGAGTaGCCAATGTGCGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMLPPTE*PMCGDC
Trigger: ACAGTCCCCGCACATTGGCAACTCTGTAGGAGGAAG...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS TCA 90 bp ATTTCACTGCTCTTGGTGAGTCTCTCCAAGGCACTCACCAGCTCTTaGACTCTGGCCTTCAACTTCTTTTCTCGACGAATGGCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ISLLLVSLSKALTSS*TLAFNFFSRRMALV
Trigger: CACCAACGCCATTCGTCGAGAAAAGAAGTTGAAGGCCAGAGTTCAAGAGCTGGTGAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 90 bp TTGCTGTTGGCCCGCTTTAGATCATTCACGAACTCTGCAGATTGCTaGTGTCGGATTTCACTGCTCTTGGTGAGTCTCTCCAAGGCACTC +
Preference number: 5 (lower is better)
Translates to: LLLARFRSFTNSADC*CRISLLLVSLSKAL
Trigger: GAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAATCCGACATCAGCAATCTGCAGAGTTCGTGAATGATCTAAAGCGGGCCAACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CCA 90 bp TTCAGGTCACTGCAGTTGTCCATGTCAGCAGTAACCATGGTAGACTaGTTTTCGGGGATAGAGACAGAGGTCTGGTCTTGGTCCATGCTT +
Preference number: 5 (lower is better)
Translates to: FRSLQLSMSAVTMVD*FSGIETEVWSWSML
Trigger: AAGCATGGACCAAGACCAGACCTCTGTCTCTATCCCCGAAAACCAGTCTACCATGGTTACTGCTGACATGGACAACTGCAGTGACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 90 bp TTCTCCTCCTCTAGCAGAGCTATTCTTTGCTTGAGCATCCTCACTTaGGTCTCATGTCTCTCCACCATGGCCATCATCTGCGACTCTAAC +
Preference number: 5 (lower is better)
Translates to: FSSSSRAILCLSILT*VSCLSTMAIICDSN
Trigger: GTTAGAGTCGCAGATGATGGCCATGGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGTGAGCCGTTCCCTCTCTGTTaGCTGGAGACGTTTATTAAG +
Preference number: 5 (lower is better)
Translates to: EWPAFPMQIQELRQQGGEPFPLC*LETFIK
Trigger: CTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGG...CTCACCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGGGTTAATCGGGCGGTaGGTGGAAGTGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: HLLRYLRMACISYANTRTGLIGR*VEVRRP
Trigger: TGGCCGCCTCACTTCCACCAACCGCCCGATTAACCC...AGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGCGGATGACGATTCGGACCTaGTCTTTGATAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: LRMACISYANTRTEAAGRMTIRT*SLIASP
Trigger: GGGTGAAGCTATCAAAGACAAGGTCCGAATCGTCAT...CCGCCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAATGTTTGGAAAATCTCTaGGATATTGGAGCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: REKSQNQESAPFPALPPKCLENL*DIGAVL
Trigger: CAGGACTGCTCCAATATCCAAGAGATTTTCCAAACA...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACTGTGTTTACACGCTGTaGTGGGCCCAGGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNCVYTL*WAQEGR
Trigger: TCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACA...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGCCTCTATCTTAAAGTaGAGACCCGGGACTTGGAAA +
Preference number: 5 (lower is better)
Translates to: QRSPLMAASILKLRPGTWASILK*RPGTWK
Trigger: TTTCCAAGTCCCGGGTCTCAACTTTAAGATAGAGGC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AGGGAGAAATCCCAGAATCAAGAGAGCGCTCCCTTCCCAGCCCTGCCTCCAAAAATACCAGTTGATCTGTaGTTTCGTTTTGGAGATGGG +
Preference number: 5 (lower is better)
Translates to: REKSQNQESAPFPALPPKIPVDL*FRFGDG
Trigger: CCCATCTCCAAAACGAAACAACAGATCAACTGGTAT...TTTTGGAGGCAGGGCTGGGAAGGGAGCGCTCTCTTGATTCTGGGATTTCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GTTGGGGCACTCCATTGTCCAAGTGCCGACCTACCTGCCAGCCTTCCCTTTCCTTCTTTTGCTTGTGATTaGCACAGTTGGTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VGALHCPSADLPASLPFPSFACD*HSWFCL
Trigger: CAAACAAAACCAACTGTGCAAATCACAAGCAAAAGA...AGGAAAGGGAAGGCTGGCAGGTAGGTCGGCACTTGGACAATGGAGTGCCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTCCACATGAATTTGACTaGCAAAAAGTGCAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: APPPQPSLKTLVALWRYPPHEFD*QKVQKG
Trigger: TCCCTTTTGCACTTTTTGCAAGTCAAATTCATGTGG...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS CCA 90 bp CCCAACTGGTTCATGATCTCAGCCACAGACTCTTCCATATTCAGCTaGCGACAGACCATTAGCAAGTCATTTCTGCTGATGTATCCGTCC +
Preference number: 5 (lower is better)
Translates to: PNWFMISATDSSIFS*RQTISKSFLLMYPS
Trigger: GGACGGATACATCAGCAGAAATGACTTGCTAATGGTCTGTCGCCAGCTGAATATGGAAGAGTCTGTGGCTGAGATCATGAACCAGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 90 bp TTTTTCAAAAGATGGAGGATCCACAGGATGGGCAGGCACCATGAGTaGGGTCAATCAGTCTTTGCCTCTCCATTCTTCTCCTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: FFKRWRIHRMGRHHE*GQSVFASPFFSFLV
Trigger: CACCAGAAAGGAGAAGAATGGAGAGGCAAAGACTGATTGACCCCACTCATGGTGCCTGCCCATCCTGTGGATCCTCCATCTTTTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CCA 90 bp AAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTTaGATCATATCACCTTGCCAGGTTTGTCTTTGCTGCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KGSVLPVVSGIYGGF*IISPCQVCLCCRCW
Trigger: CCAGCAGCGGCAGCAAAGACAAACCTGGCAAGGTGATATGATCCAAAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGATGCTCGCACTGTGCCTaGGCCAATTTCTTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: QIFVAGKLTLMALATTDRCSHCA*ANFFSR
Trigger: TCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGCA...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGTGCTCGCACTGTGCCTaGGCCAATTTCTTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMCSHCA*ANFFSR
Trigger: TCTGGAAAAGAAATTGGCCAAGGCACAGTGCGAGCA...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTCTCTCTTCAGCCAGGTaGGGATACAGGTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCLSSAR*GYRSRP
Trigger: TGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGAG...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAACTCTCTTCAGCCAGGTaGGGATACAGGTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQLSSAR*GYRSRP
Trigger: TGGCCGGGACCTGTATCCCAACCTGGCTGAAGAGAG...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAAGTGCTGGTGTGGCTGTaGGAGGAAAGGCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQEVLVWL*EERLSQ
Trigger: CTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCAC...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTGGCTGTGGAGCTGGTaGTGCTGGTGTGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCWLWSW*CWCGCW
Trigger: CCAACAGCCACACCAGCACAACCAGCTCCACAGCCA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTGCCAGGTTTGTCTTaGCTGCCGCTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RRIYKGSVLPVVSGIYGGLPGLS*LPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAA...TCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAAATGTTTCTCAGCTCTaGAAGAAACCCCTGACAGAA +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGNVSQL*KKPLTE
Trigger: TTCTGTCAGGGGTTTCTTCAAGAGCTGAGAAACATT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GAGCAGGCACAGAACATGTGTTTACACGCTGTTGTGGGCCCAGGAGGGAAGAGCAGAAGGCTGTGGAATTaGTATCATGCTCTGAAAATA +
Preference number: 5 (lower is better)
Translates to: EQAQNMCLHAVVGPGGKSRRLWN*YHALKI
Trigger: TATTTTCAGAGCATGATACAAATTCCACAGCCTTCT...GCTCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACATGTTCTGTGCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGGTTCACCTTCAAGGATaGTGTCTTGGGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: QRSPLMAASILKLRPGTWVHLQG*CLGEYL
Trigger: CAAATACTCCCCAAGACACAATCCTTGAAGGTGAAC...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp TTTAGGATACAGCTGTCTGCCCTCCGAACTGGTGGCTGGAGTATCCTCCAGCGACTTGTATATCATTCCTaGTCAAATAGGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: FRIQLSALRTGGWSILQRLVYHS*SNRLFP
Trigger: TGGGAACAGCCTATTTGACAAGGAATGATATACAAG...TCGCTGGAGGATACTCCAGCCACCAGTTCGGAGGGCAGACAGCTGTATCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCTCCACCTCCCCAGCCCTCACTAAAAACTTTGGTAGCCCTATGGCGGTACCCTAATGATTTCTTCCTCTaGGTCACATGCAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: APPPQPSLKTLVALWRYPNDFFL*VTCKIS
Trigger: TGAGATTTTGCATGTGACCAAGAGGAAGAAATCATT...AGGGTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGGCTGGGGAGGTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACAGACGGTCTATCTTCTaGTTGAGCTCCGCAATGACG +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNRRSIF*LSSAMT
Trigger: CGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAATTCGGACCTTGTCTTaGATAGCTTCACCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: QIFVAGKLTLMALATTDRIRTLS*IASPSQ
Trigger: CTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAAT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGATTCGGACCTTGTCTTaGATAGCTTCACCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: YLRMACISYANTRTEAAGIRTLS*IASPSQ
Trigger: CTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAAT...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp TACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCAGGGAGGTCATTTTGGGATTaGAGGTGCTCAATCCGGCTA +
Preference number: 5 (lower is better)
Translates to: YLRMACISYANTRTEAAGRSFWD*RCSIRL
Trigger: TAGCCGGATTGAGCACCTCAAATCCCAAAATGACCT...CCCTGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp AGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGAGGCAGCACTCAGCGCTGTGGCATaGGATTCGTATTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: RYLRMACISYANTRTEAALSAVA*DSYFPT
Trigger: GGTGGGAAAATACGAATCCAATGCCACAGCGCTGAG...TGCTGCCTCAGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTTTCATGAGCAGGGCCTaGGCAGCGTTCTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCFMSRA*AAFSAV
Trigger: GACAGCTGAGAACGCTGCCAAGGCCCTGCTCATGAA...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGTGCTGGTGTGGCTGTaGGAGGAAAGGCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWVLVWL*EERLSQ
Trigger: CTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCAC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATATGGCTGTGGAGCTGGTaGTGCTGGTGTGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIWLWSW*CWCGCW
Trigger: CCAACAGCCACACCAGCACAACCAGCTCCACAGCCA...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp AGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTTGGCTGTGGAGCTGGTaGTGCTGGTGTGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: RIYKGSVLPVVSGIYGGFWLWSW*CWCGCW
Trigger: CCAACAGCCACACCAGCACAACCAGCTCCACAGCCA...AAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CAA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAATCCAGCATGGTCAGCTaGACCGCAGCCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQESSMVS*TAALSF
Trigger: GAATGACAGGGCTGCGGTCAAGCTGACCATGCTGGA...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAATTGCCAGGTTTGTCTTaGCTGCCGCTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQELPGLS*LPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAA...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTCTCGACGAATGGCGTaGGTGAACTCCGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWSRRMA*VNSAAS
Trigger: GCTGGCTGCGGAGTTCACCAACGCCATTCGTCGAGA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAGATCACCTCTTATGGCCGCCTCTATCTTAAAGTTGAGACCCGGGACTTGGTCTCTCAATACAAAATaGTTCAGGCACAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: QRSPLMAASILKLRPGTWSLNTK*FRHSPG
Trigger: ACCAGGACTGTGCCTGAACAATTTTGTATTGAGAGA...CCAAGTCCCGGGTCTCAACTTTAAGATAGAGGCGGCCATAAGAGGTGATCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGATCTGTTGTTTCGTTTaGGAGATGGGCAGCCTCACT +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMICCFV*EMGSLT
Trigger: AGTGAGGCTGCCCATCTCCAAAACGAAACAACAGAT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS CCA 90 bp GCATTGCTTTTACATTCCTCCAAGGTTATGGTCAGGAGGTCATTTTaGGATTTGAGGTGCTCAATCCGGCTATTCAGCCGTTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: ALLLHSSKVMVRRSF*DLRCSIRLFSRSVS
Trigger: GGAAACAGAACGGCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAATGACCTCCTGACCATAACCTTGGAGGAATGTAAAAGCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTGCGATGGGAATGTCATaGCTGCTGCTGCTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCAMGMS*LLLLVL
Trigger: GAGCACAAGCAGCAGCAGCAATGACATTCCCATCGC...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTGCGATGGGAATGTCATaGCTGCTGCTGCTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: HLLRYLRMACISYANTRTAMGMS*LLLLVL
Trigger: GAGCACAAGCAGCAGCAGCAATGACATTCCCATCGC...AGTTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACATTCGGACCTTGTCTTaGATAGCTTCACCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNIRTLS*IASPSQ
Trigger: CTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAAT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACCTCATCCTCTCGGCATaGCTTTTACATTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNLILSA*LLHSSK
Trigger: CTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGAG...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp TGTATAGGGGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGTGCTGGTGTGGCTGTaGGAGGAAAGGCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CIGENVEYIRVQYYLWFQVLVWL*EERLSQ
Trigger: CTGGGAGAGCCTTTCCTCCAACAGCCACACCAGCAC...CTGAAACCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCCCCTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACCACGAACTCTGCAGATaGCTGATGTCGGATTTCACT +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNHELCR*LMSDFT
Trigger: AGTGAAATCCGACATCAGCAATCTGCAGAGTTCGTG...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACAGTCGCCCCAAGGGTaGAGTTGGGGCACTCCATTG +
Preference number: 5 (lower is better)
Translates to: KMSPASTKKRIQWKILQKQSPQG*SWGTPL
Trigger: CAATGGAGTGCCCCAACTCAACCCTTGGGGCGACTG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAAACAAATGTCTGGGATCCCACTGATGCACAGCCGCCAGACCAGAAGAGGAAGAAGGCTGTGGAATTaGTATCATGCTCTGAAAATA +
Preference number: 5 (lower is better)
Translates to: QKQMSGIPLMHSRQTRRGRRLWN*YHALKI
Trigger: TATTTTCAGAGCATGATACAAATTCCACAGCCTTCT...TCCTCTTCTGGTCTGGCGGCTGTGCATCAGTGGGATCCCAGACATTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACATCTGTTGTTTCGTTTaGGAGATGGGCAGCCTCACT +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNICCFV*EMGSLT
Trigger: AGTGAGGCTGCCCATCTCCAAAACGAAACAACAGAT...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp ACAGGTCCAGAGCTACAAATGCACCCATGTGGAAGAGATTTGATTCAGCAGAACCACAGTTGGTTTTGTTaGCCTCAGTCCAACAATGGG +
Preference number: 5 (lower is better)
Translates to: TGPELQMHPCGRDLIQQNHSWFC*PQSNNG
Trigger: CCCATTGTTGGACTGAGGCAAACAAAACCAACTGTG...GTTCTGCTGAATCAAATCTCTTCCACATGGGTGCATTTGTAGCTCTGGACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp TCATGCCAGGGACACAGGCAGTCCAATCTTGATCGGGTAACTACGGTGCACTTTTTCTTTGTACAGGAGTaGTCTGACTTTGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SCQGHRQSNLDRVTTVHFFFVQE*SDFAER
Trigger: TCTTTCTGCAAAGTCAGACAACTCCTGTACAAAGAA...AAAGTGCACCGTAGTTACCCGATCAAGATTGGACTGCCTGTGTCCCTGGCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CAA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAACACTCCGGCCCTACCTaGCCAGGTTTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQHSGPT*PGLSLL
Trigger: CAGCAAAGACAAACCTGGCAAGGTAGGGCCGGAGTG...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS TCA 90 bp AAATGCGTTACACAGGGCAACAAATGCTGTCTGTTTTGCTTACCATaGGGGACTCATTCAGGTAATGGGATGGCAATGGAGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: KCVTQGNKCCLFCLP*GTHSGNGMAMEPDI
Trigger: AATGTCAGGCTCCATTGCCATCCCATTACCTGAATGAGTCCCTCATGGTAAGCAAAACAGACAGCATTTGTTGCCCTGTGTAACGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505604.1
CDS-3UTR CAA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATATTTCACCCAGGACAGTaGCGAAGCGCAAACGGAGGA +
Preference number: 5 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIFHPGQ*RSANGG
Trigger: TCCTCCGTTTGCGCTTCGCAACTGTCCTGGGTGAAA...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGGACAGAGGTCTGGTCTaGGTCCATGCTTCGAGAGTC +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWDRGLV*VHASRV
Trigger: GACTCTCGAAGCATGGACCAAGACCAGACCTCTGTC...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATAGACAGAGGTCTGGTCTaGGTCCATGCTTCGAGAGTC +
Preference number: 5 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIDRGLV*VHASRV
Trigger: GACTCTCGAAGCATGGACCAAGACCAGACCTCTGTC...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp GGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATTCCAGCATGGTCAGCTaGACCGCAGCCCTGTCATTC +
Preference number: 5 (lower is better)
Translates to: GKRRIYKGSVLPVVSGIYSSMVS*TAALSF
Trigger: GAATGACAGGGCTGCGGTCAAGCTGACCATGCTGGA...ATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCACTCCTTGCCAGGTTaGTCTTTGCTGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIHSLPG*SLLPLL
Trigger: CAGCAGCGGCAGCAAAGACAAACCTGGCAAGGAGTG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTGCATCAGCACACTCCTaGCCAGGTTTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCASAHS*PGLSLL
Trigger: CAGCAAAGACAAACCTGGCAAGGAGTGTGCTGATGC...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS GCA 90 bp GCCTTGGCCAATTTCTTTTCCAGAAGGTCCCGTTCCCTCTCTGTTTaGTGGAGACGTTTATTAAGTTCCACTATATCTCCCTTTAGTGAT +
Preference number: 5 (lower is better)
Translates to: ALANFFSRRSRSLSV*WRRLLSSTISPFSD
Trigger: ATCACTAAAGGGAGATATAGTGGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGGGACCTTCTGGAAAAGAAATTGGCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS GCA 90 bp GCGGCATCTTGTGAAATCCTGAAAGGAAATCTTCCCATTTTCATCTaGTCCCAACTGGTTCATGATCTCAGCCACAGACTCTTCCATATT +
Preference number: 5 (lower is better)
Translates to: AASCEILKGNLPIFI*SQLVHDLSHRLFHI
Trigger: AATATGGAAGAGTCTGTGGCTGAGATCATGAACCAGTTGGGAGCAGATGAAAATGGGAAGATTTCCTTTCAGGATTTCACAAGATGCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCGGTCTATCTTCTTGTaGAGCTCCGCAATGACGCTG +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQRSIFL*SSAMTL
Trigger: CAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAACGGTCTATCTTCTTGTaGAGCTCCGCAATGACGCTG +
Preference number: 5 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQRSIFL*SSAMTL
Trigger: CAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCG...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACCTGATGGTGGTGCCTaGCAGACGGTCTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: QNVTFLDTYEWPAFPMQIPDGGA*QTVYLL
Trigger: AAGAAGATAGACCGTCTGCAAGGCACCACCATCAGG...TATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp ACTCAAAATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAACCCTCTCAGCAATCTaGGCGATGGGAATGTCATTG +
Preference number: 5 (lower is better)
Translates to: TQNVTFLDTYEWPAFPMQTLSAI*AMGMSL
Trigger: CAATGACATTCCCATCGCCAAGATTGCTGAGAGGGT...TTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCTTGAGCATCCTCACTaGGGTCTCATGTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQLEHPH*GLMSLH
Trigger: GTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCTGTGTTTACACGCTGTaGTGGGCCCAGGAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: ASSVNSIRVLKGESNLYICVYTL*WAQEGR
Trigger: TCTTCCCTCCTGGGCCCACAACAGCGTGTAAACACA...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGATTTTTGTAGCTGGTAAGCTCACACTGATGGCACTCGCAACTACGGACAGAAATAATTCAGTTACTTaGGTACTGCCTAGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: QIFVAGKLTLMALATTDRNNSVT*VLPSPV
Trigger: TACAGGGCTAGGCAGTACCAAAGTAACTGAATTATT...TCTGTCCGTAGTTGCGAGTGCCATCAGTGTGAGCTTACCAGCTACAAAAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GGAAAACGTAGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATATCACCTTGCCAGGTTaGTCTTTGCTGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GKRRIYKGSVLPVVSGIYITLPG*SLLPLL
Trigger: CAGCAGCGGCAGCAAAGACAAACCTGGCAAGGTGAT...ATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCTACGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS TCA 90 bp TTCCTAATTTCTCGAACAAGCTGCATGCGGCATCTTGTGAAATCCTaGAAGGAAATCTTCCCATTTTCATCTGCTCCCAACTGGTTCATG +
Preference number: 5 (lower is better)
Translates to: FLISRTSCMRHLVKS*KEIFPFSSAPNWFM
Trigger: CATGAACCAGTTGGGAGCAGATGAAAATGGGAAGATTTCCTTTCAGGATTTCACAAGATGCCGCATGCAGCTTGTTCGAGAAATTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS TCA 90 bp CCAGGAAGCAATTCTATCCCTCAGCTTCTTTGTACAGGAGTTGTCTaGCTTTGCAGAAAGATCTACTTCCTCCTTCCTAATTTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PGSNSIPQLLCTGVV*LCRKIYFLLPNFSN
Trigger: GTTCGAGAAATTAGGAAGGAGGAAGTAGATCTTTCTGCAAAGTCAGACAACTCCTGTACAAAGAAGCTGAGGGATAGAATTGCTTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGACCCTCTCAGCAATCTaGGCGATGGGAATGTCATTG +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQTLSAI*AMGMSL
Trigger: CAATGACATTCCCATCGCCAAGATTGCTGAGAGGGT...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAAGAACTCATCCTCTCGGCATaGCTTTTACATTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VTFLDTYEWPAFPMQIQELILSA*LLHSSK
Trigger: CTTGGAGGAATGTAAAAGCAATGCCGAGAGGATGAG...TTCTTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCCCTCACTAAAAACTTaGGTAGCCCTATGGCGGTAC +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQPSLKT*VALWRY
Trigger: GTACCGCCATAGGGCTACCAAAGTTTTTAGTGAGGG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GATTCAGCAGAACAGCAATTATGTAGTGCCCTGGGGCGGGAAGTGCTAATAATGAATGATTTCTTCCTCTaGGTCACATGCAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: DSAEQQLCSALGREVLIMNDFFL*VTCKIS
Trigger: TGAGATTTTGCATGTGACCAAGAGGAAGAAATCATT...CATTATTAGCACTTCCCGCCCCAGGGCACTACATAATTGCTGTTCTGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCACCCTCTCAGCAATCTaGGCGATGGGAATGTCATTG +
Preference number: 5 (lower is better)
Translates to: ASSVNSIRVLKGESNLYITLSAI*AMGMSL
Trigger: CAATGACATTCCCATCGCCAAGATTGCTGAGAGGGT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGCACGAACTCTGCAGATaGCTGATGTCGGATTTCACT +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWHELCR*LMSDFT
Trigger: AGTGAAATCCGACATCAGCAATCTGCAGAGTTCGTG...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGAGAGCTATTCTTTGCTaGAGCATCCTCACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWRAILC*SILTWV
Trigger: GACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTATCTCCTCAGTGTCTaGTCCTTAGGTAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQYLLSV*SLGRDR
Trigger: CCTGTCTCTACCTAAGGACAAGACACTGAGGAGATA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTATGACGATTCGGACCTaGTCTTTGATAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFMTIRT*SLIASP
Trigger: GGGTGAAGCTATCAAAGACAAGGTCCGAATCGTCAT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTAGGTCATTTTGGGATTaGAGGTGCTCAATCCGGCTA +
Preference number: 5 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFRSFWD*RCSIRL
Trigger: TAGCCGGATTGAGCACCTCAAATCCCAAAATGACCT...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTTATCTCCTCAGTGTCTaGTCCTTAGGTAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFYLLSV*SLGRDR
Trigger: CCTGTCTCTACCTAAGGACAAGACACTGAGGAGATA...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTATACCAGTTGATCTGTaGTTTCGTTTTGGAGATGGG +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCIPVDL*FRFGDG
Trigger: CCCATCTCCAAAACGAAACAACAGATCAACTGGTAT...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTTGTGAAATGGGTCCTTaGGCTCTGTGCCCATTTCTT +
Preference number: 5 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFCEMGP*ALCPFL
Trigger: AAGAAATGGGCACAGAGCCAAAGGACCCATTTCACA...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAACACAGTTGGTTTTGTTaGCCTCAGTCCAACAATGGG +
Preference number: 5 (lower is better)
Translates to: KMSPASTKKRIQWKILQKHSWFC*PQSNNG
Trigger: CCCATTGTTGGACTGAGGCAAACAAAACCAACTGTG...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp AGAATATATAAGGGTTCAGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTTTGGATCATATCACCTaGCCAGGTTTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RIYKGSVLPVVSGIYGGFLDHIT*PGLSLL
Trigger: CAGCAAAGACAAACCTGGCAAGGTGATATGATCCAA...AAATCCCCCATAGATGCCTGAAACCACAGGTAATACTGAACCCTTATATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS-3UTR CAA 90 bp AATGTCACCTTCTTAGATACCTACGAATGGCCTGCATTTCCTATGCAAATACAATGTTTGGAAAATCTCTaGGATATTGGAGCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: NVTFLDTYEWPAFPMQIQCLENL*DIGAVL
Trigger: CAGGACTGCTCCAATATCCAAGAGATTTTCCAAACA...TTGTATTTGCATAGGAAATGCAGGCCATTCGTAGGTATCTAAGAAGGTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGTCTCTCAATACAAAATaGTTCAGGCACAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQSLNTK*FRHSPG
Trigger: ACCAGGACTGTGCCTGAACAATTTTGTATTGAGAGA...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGTTTGCACAGTTGGTTTaGTTTGCCTCAGTCCAACAA +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWFAQLV*FASVQQ
Trigger: TTGTTGGACTGAGGCAAACAAAACCAACTGTGCAAA...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp AAGATGAGCCCAGCATCTACCAAAAAGAGGATACAATGGAAAATCTTACAGAAATGTTTGGAAAATCTCTaGGATATTGGAGCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: KMSPASTKKRIQWKILQKCLENL*DIGAVL
Trigger: CAGGACTGCTCCAATATCCAAGAGATTTTCCAAACA...TTTCTGTAAGATTTTCCATTGTATCCTCTTTTTGGTAGATGCTGGGCTCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS-3UTR CAA 90 bp GTTGGTTTTGTTTGCCTCAGTCCAACAATGGGAAATATATTCCAAGGGAACTGTCATTGTTTACCCTCATaGGAGATGTTTGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: VGFVCLSPTMGNIFQGNCHCLPS*EMFVRE
Trigger: TTCTCTAACAAACATCTCCAATGAGGGTAAACAATG...ACAGTTCCCTTGGAATATATTTCCCATTGTTGGACTGAGGCAAACAAAACCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CTTGCCATTCCTGACATGAGCACTATAAGTGAATACTATGAGTTCTACAAACAGCTTGTATATCATTCCTaGTCAAATAGGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: LAIPDMSTISEYYEFYKQLVYHS*SNRLFP
Trigger: TGGGAACAGCCTATTTGACAAGGAATGATATACAAG...CTGTTTGTAGAACTCATAGTATTCACTTATAGTGCTCATGTCAGGAATGGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCAGGAGTTGTCTGACTTaGCAGAAAGATCTACTTCCT +
Preference number: 5 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIRSCLT*QKDLLP
Trigger: AGGAAGTAGATCTTTCTGCAAAGTCAGACAACTCCT...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS-3UTR CAA 90 bp CAGAATTTTAGTTCCACTACAGGTATCAAAAAGATTCCCAGCTCTAAGTCTTGGAAATTTGTGTATAACTaGCTTTGTTCTGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: QNFSSTTGIKKIPSSKSWKFVYN*LCSAEL
Trigger: CAGCTCAGCAGAACAAAGCAAGTTATACACAAATTT...CCAAGACTTAGAGCTGGGAATCTTTTTGATACCTGTAGTGGAACTAAAATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp GCCTCTTCTGTAAACTCTATAAGAGTGCTCAAAGGTGAATCAAACTTGTATATCCATTGTTTACCCTCATaGGAGATGTTTGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: ASSVNSIRVLKGESNLYIHCLPS*EMFVRE
Trigger: TTCTCTAACAAACATCTCCAATGAGGGTAAACAATG...GATATACAAGTTTGATTCACCTTTGAGCACTCTTATAGAGTTTACAGAAGAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS-3UTR CAA 90 bp CATTCCTTGTCAAATAGGCTGTTCCCACTGGATAAGAAAATTTGCTGTATGTTTTCTTTTGCTTGTGATTaGCACAGTTGGTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: HSLSNRLFPLDKKICCMFSFACD*HSWFCL
Trigger: CAAACAAAACCAACTGTGCAAATCACAAGCAAAAGA...AAACATACAGCAAATTTTCTTATCCAGTGGGAACAGCCTATTTGACAAGGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000408903.7
CDS GCA 72 bp CCTCGCCGGTGCTGGACGTGTCGCTGCTGCTGCTGCTaGTGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PRRCWTCRCCCC*CRCRRRRRRCW
Trigger: CCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGG
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 72 bp CCTCCTCGCCGGTGCTGGACGTGTCGCTGCTGCTGCTaGTGCTGCCGCTGCCGCCGCCGCCGCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PPRRCWTCRCCC*CCRCRRRRRRC
Trigger: GCAGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGG
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 72 bp TCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTGCTaGTGCTGCTGCCGCTGCCGCCGCCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SPPRRCWTCRCC*CCCRCRRRRRR
Trigger: GCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGA
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 72 bp TCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTGCTaGTGCTGCTGCTGCCGCTGCCGCCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SSPPRRCWTCRC*CCCCRCRRRRR
Trigger: GCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGA
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 72 bp GCATCCTCTCCTCCTCGCCGGTGCTGGACGTGTCGCTaGTGCTGCTGCTGCTGCCGCTGCCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: ASSPPRRCWTCR*CCCCCRCRRRR
Trigger: GCGGCGGCGGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS CCA 72 bp CGTTTCACGGACGAGCCATTGCTGCAGGAGGCTCGGTaGCGCGGCGCGCTCGCAGCTGCGGCAGCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: RFTDEPLLQEAR*RGALAAAAAAE
Trigger: CTCCGCCGCTGCCGCAGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS GCA 72 bp GCAGCCGTGGCTCGCGTTTCACGGACGAGCCATTGCTaGAGGAGGCTCGGTGGCGCGGCGCGCTCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: AAVARVSRTSHC*RRLGGAARSQL
Trigger: CAGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACGGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS CAA 90 bp TGGCCGCCGGGGCGCTCCGGGCGAGGGATTCCACCTCTCCGGGTTTaGCCCGGACTGGGAAGATGGGCGCTCTGGAATCGCCCGAGGAGG +
Preference number: 6 (lower is better)
Translates to: WPPGRSGRGIPPLRV*PGLGRWALWNRPRR
Trigger: CCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCCCGGAGCGCCCCGGCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 72 bp AGAGCAGCCGTGGCTCGCGTTTCACGGACGAGCCATTaGTGCAGGAGGCTCGGTGGCGCGGCGCGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: RAAVARVSRTSH*CRRLGGAARSQ
Trigger: CTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACGGCTGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS CCA 72 bp GGAAGAGGCGCCGCATCCTCTCCTCCTCGCCGGTGCTaGACGTGTCGCTGCTGCTGCTGCTGCTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: GRGAASSPPRRC*TCRCCCCCCRC
Trigger: GCAGCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCTTCC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS CCA 72 bp CAGCCCCGAACTTGCCTGACAACGGAGCATGCCCAGTaGCCGCCGGGGCGCTCCGGGCGAGGGATTCCACCT +
Preference number: 6 (lower is better)
Translates to: QPRTCLTTEHAQ*PPGRSGRGIPP
Trigger: AGGTGGAATCCCTCGCCCGGAGCGCCCCGGCGGCCACTGGGCATGCTCCGTTGTCAGGCAAGTTCGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 72 bp TCTCCAGGGGAGGACCCCACGCCCGCCGCTCGGAACTaGCCCAGGATGAGGCTCTGCTCACTCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPGEDPTPAARN*PRMRLCSLSAS
Trigger: GCTGGCAGAGAGTGAGCAGAGCCTCATCCTGGGGCAGTTCCGAGCGGCGGGCGTGGGGTCCTCCCCTGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS GCA 72 bp TCTGGAAGAGGCGCCGCATCCTCTCCTCCTCGCCGGTaGTGGACGTGTCGCTGCTGCTGCTGCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SGRGAASSPPRR*WTCRCCCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGCGACACGTCCAGCACCGGCGAGGAGGAGAGGATGCGGCGCCTCTTCCAGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408903.7
ENST00000511242.1
CDS GCA 72 bp GCGCGACCGCAGCTGGAATCCGCGCGGCGCGCAAGCTaGCTGCAGCCCCGAACTTGCCTGACAACGGAGCAT +
Preference number: 6 (lower is better)
Translates to: ARPQLESARRAS*LQPRTCLTTEH
Trigger: ATGCTCCGTTGTCAGGCAAGTTCGGGGCTGCAGGCAGCTTGCGCGCCGCGCGGATTCCAGCTGCGGTCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 72 bp AAGAGCAGCCGTGGCTCGCGTTTCACGGACGAGCCATaGCTGCAGGAGGCTCGGTGGCGCGGCGCGCTCGCA +
Preference number: 6 (lower is better)
Translates to: KSSRGSRFTDEP*LQEARWRGALA
Trigger: TGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACGGCTGCTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS GCA 72 bp CTGGTGTGGCTGTTGGAGGAAAGGCTCTCCCAGGGCTaGACGCTGCAGCCGGCCACGGCAAAGGCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: LVWLLEERLSQG*TLQPATAKAPP
Trigger: TGGGGGAGCCTTTGCCGTGGCCGGCTGCAGCGTGCAGCCCTGGGAGAGCCTTTCCTCCAACAGCCACACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS GCA 72 bp GGCGCTCCGGGCGAGGGATTCCACCTCTCCGGGTTTTaGCCGGACTGGGAAGATGGGCGCTCTGGAATCGCC +
Preference number: 6 (lower is better)
Translates to: GAPGEGFHLSGF*PDWEDGRSGIA
Trigger: GGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCCCGGAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 72 bp GGGCGCTCCGGGCGAGGGATTCCACCTCTCCGGGTTTaGCCCGGACTGGGAAGATGGGCGCTCTGGAATCGC +
Preference number: 6 (lower is better)
Translates to: GRSGRGIPPLRV*PGLGRWALWNR
Trigger: GCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCCCGGAGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 90 bp CTGCTGCTTGTGCTCAGCTCCCCAGTGCTGGGGTTAATCGGGCGGTaGGTGGAAGTGAGGCGGCCAGGGCTGGAGGGACCTGTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: LLLVLSSPVLGLIGR*VEVRRPGLEGPVAC
Trigger: GCAGGCCACAGGTCCCTCCAGCCCTGGCCGCCTCACTTCCACCAACCGCCCGATTAACCCCAGCACTGGGGAGCTGAGCACAAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp GGGTGTCAGCATTGTGCATCCGGCAACGACGCGGGCCCGGGACACTaGGGGACGCTTCAGGCAGAGGGCAGGTGTACTCCCGGCAGACCT +
Preference number: 6 (lower is better)
Translates to: GCQHCASGNDAGPGH*GTLQAEGRCTPGRP
Trigger: AGGTCTGCCGGGAGTACACCTGCCCTCTGCCTGAAGCGTCCCCAAGTGTCCCGGGCCCGCGTCGTTGCCGGATGCACAATGCTGACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 72 bp CAGCCCCATGCCCAGGAAGGGCCTGACCATTATGGATaGAGCATGCTCACCCTCCTCCGGAGCCGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: QPHAQEGPDHYG*SMLTLLRSRSR
Trigger: GCGGGACCGGCTCCGGAGGAGGGTGAGCATGCTGCATCCATAATGGTCAGGCCCTTCCTGGGCATGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502648.5
ENST00000505604.1
CDS CCA 72 bp GGCGAGGGATTCCACCTCTCCGGGTTTTGCCCGGACTaGGAAGATGGGCGCTCTGGAATCGCCCGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: GEGFHLSGFCPD*EDGRSGIARGG
Trigger: GCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAATCCCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 72 bp GTGCTCAGCTCCCCAGTGCTGGGGTTAATCGGGCGGTaGGTGGAAGTGAGGCGGCCAGGGCTGGAGGGACCT +
Preference number: 6 (lower is better)
Translates to: VLSSPVLGLIGR*VEVRRPGLEGP
Trigger: AGGTCCCTCCAGCCCTGGCCGCCTCACTTCCACCAACCGCCCGATTAACCCCAGCACTGGGGAGCTGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp CATTGTGCATCCGGCAACGACGCGGGCCCGGGACACTaGGGGACGCTTCAGGCAGAGGGCAGGTGTACTCCC +
Preference number: 6 (lower is better)
Translates to: HCASGNDAGPGH*GTLQAEGRCTP
Trigger: GGGAGTACACCTGCCCTCTGCCTGAAGCGTCCCCAAGTGTCCCGGGCCCGCGTCGTTGCCGGATGCACAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 90 bp ACTCTTAAAAAGAGCAGCCGTGGCTCGCGTTTCACGGACGAGCCATaGCTGCAGGAGGCTCGGTGGCGCGGCGCGCTCGCAGCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: TLKKSSRGSRFTDEP*LQEARWRGALAAAA
Trigger: TGCCGCAGCTGCGAGCGCGCCGCGCCACCGAGCCTCCTGCAGCAATGGCTCGTCCGTGAAACGCGAGCCACGGCTGCTCTTTTTAAGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS GCA 72 bp CTGCCGCTGCTGGTGGAGCTGAGGGATCGCATCCGCTaGTCCTTCTGCTCCTCCACCTCGGACTTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: LPLLVELRDRIR*SFCSSTSDFRC
Trigger: GCACCTGAAGTCCGAGGTGGAGGAGCAGAAGGAGCAGCGGATGCGATCCCTCAGCTCCACCAGCAGCGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
ENST00000624689.3
CDS GCA 72 bp ATACACTGGAAGCCCCCGGGAAGGGTGTCAGCATTGTaGATCCGGCAACGACGCGGGCCCGGGACACTTGGG +
Preference number: 6 (lower is better)
Translates to: IHWKPPGRVSAL*IRQRRGPGTLG
Trigger: CCCAAGTGTCCCGGGCCCGCGTCGTTGCCGGATGCACAATGCTGACACCCTTCCCGGGGGCTTCCAGTGTAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CCA 72 bp CTCCGGGTTTTGCCCGGACTGGGAAGATGGGCGCTCTaGAATCGCCCGAGGAGGCACCTCAGGGAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: LRVLPGLGRWAL*NRPRRHLREEG
Trigger: TCCCTCTTCCCTGAGGTGCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 90 bp AGAGGAGGCAGAATACACTGGAAGCCCCCGGGAAGGGTGTCAGCATaGTGCATCCGGCAACGACGCGGGCCCGGGACACTTGGGGACGCT +
Preference number: 6 (lower is better)
Translates to: RGGRIHWKPPGRVSA*CIRQRRGPGTLGDA
Trigger: AGCGTCCCCAAGTGTCCCGGGCCCGCGTCGTTGCCGGATGCACAATGCTGACACCCTTCCCGGGGGCTTCCAGTGTATTCTGCCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS GCA 72 bp CCATACTCGAGCAGCTTCTGGAGGGCTGACTGGCTCTaGACATCCGGGCTCTGGAGGTCCCTGGCACCAGAG +
Preference number: 6 (lower is better)
Translates to: PYSSSFWRADWL*TSGLWRSLAPE
Trigger: CTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 72 bp CTGACTGGCTCTGCACATCCGGGCTCTGGAGGTCCCTaGCACCAGAGTCGTATTCCCAGCTCTCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LTGSAHPGSGGP*HQSRIPSSPWL
Trigger: CAGCCAGGGAGAGCTGGGAATACGACTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 72 bp CTTCCGCCATACTCGAGCAGCTTCTGGAGGGCTGACTaGCTCTGCACATCCGGGCTCTGGAGGTCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: LPPYSSSFWRAD*LCTSGLWRSLA
Trigger: TGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTATGGCGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 72 bp TGTGCTCTGGTCCTCCTTGCCCAAGAGGTGTGGGGATaGGTGTGGTGGAGGCACAGTCCGGGGTTGGTCTCG +
Preference number: 6 (lower is better)
Translates to: CALVLLAQEVWG*VWWRHSPGLVS
Trigger: CGAGACCAACCCCGGACTGTGCCTCCACCACACCCATCCCCACACCTCTTGGGCAAGGAGGACCAGAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506605.6
CDS CCA 72 bp ATTCCACCTCTCCGGGTTTTGCCCGGACTGGGAAGATaGGCGCTCTGGAATCGCCCGAGGAGGCACCTCAGG +
Preference number: 6 (lower is better)
Translates to: IPPLRVLPGLGR*ALWNRPRRHLR
Trigger: CCTGAGGTGCCTCCTCGGGCGATTCCAGAGCGCCCATCTTCCCAGTCCGGGCAAAACCCGGAGAGGTGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS TCA 72 bp AGAGCTTCCGCCATACTCGAGCAGCTTCTGGAGGGCTaGCTGGCTCTGCACATCCGGGCTCTGGAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: RASAILEQLLEG*LALHIRALEVP
Trigger: AGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAAGCTGCTCGAGTATGGCGGAAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 72 bp TTCTGGAGGGCTGACTGGCTCTGCACATCCGGGCTCTaGAGGTCCCTGGCACCAGAGTCGTATTCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FWRADWLCTSGL*RSLAPESYSQL
Trigger: GAGCTGGGAATACGACTCTGGTGCCAGGGACCTCCAGAGCCCGGATGTGCAGAGCCAGTCAGCCCTCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CAA 72 bp AGAATACACTGGAAGCCCCCGGGAAGGGTGTCAGCATaGTGCATCCGGCAACGACGCGGGCCCGGGACACTT +
Preference number: 6 (lower is better)
Translates to: RIHWKPPGRVSA*CIRQRRGPGTL
Trigger: AAGTGTCCCGGGCCCGCGTCGTTGCCGGATGCACAATGCTGACACCCTTCCCGGGGGCTTCCAGTGTATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 72 bp AGCCTAAGGGTGTCCCCAAGCCACTCCGGCCCTACCTaGCCAGGTTTGTCTTTGCTGCCGCTGCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SLRVSPSHSGPT*PGLSLLPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAAGGTAGGGCCGGAGTGGCTTGGGGACACCCTTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514701.5
CDS GCA 72 bp ATAGCCAGGTCACAGTGCTCGCTGGCTGTGGTGAGCTaGTCAATGTGCTTGTCCACCTCGGCCACGGAGAGG +
Preference number: 6 (lower is better)
Translates to: IARSQCSLAVVS*SMCLSTSATER
Trigger: CCTCTCCGTGGCCGAGGTGGACAAGCACATTGAGCAGCTCACCACAGCCAGCGAGCACTGTGACCTGGCTAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000505604.1
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp TTGACATGTGCTCTGGTCCTCCTTGCCCAAGAGGTGTaGGGATGGGTGTGGTGGAGGCACAGTCCGGGGTTG +
Preference number: 6 (lower is better)
Translates to: LTCALVLLAQEV*GWVWWRHSPGL
Trigger: CAACCCCGGACTGTGCCTCCACCACACCCATCCCCACACCTCTTGGGCAAGGAGGACCAGAGCACATGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506605.6
CDS GCA 72 bp GCTCAATGTGCTTGTCCACCTCGGCCACGGAGAGGCTaGAGCTGCTCTTCTTCCTGCCGCAGACAACATTCT +
Preference number: 6 (lower is better)
Translates to: AQCACPPRPRRG*SCSSSCRRQHS
Trigger: AGAATGTTGTCTGCGGCAGGAAGAAGAGCAGCTGCAGCCTCTCCGTGGCCGAGGTGGACAAGCACATTGAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000505604.1
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp GGTCCCTGGCACCAGAGTCGTATTCCCAGCTCTCCCTaGCTGCTGATAAGGCACCCAAACTGTTGTCACTGC +
Preference number: 6 (lower is better)
Translates to: GPWHQSRIPSSP*LLIRHPNCCHC
Trigger: GCAGTGACAACAGTTTGGGTGCCTTATCAGCAGCCAGGGAGAGCTGGGAATACGACTCTGGTGCCAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS TCA 72 bp GTGTCGTTCGCTCCTGGACATCCTCATGCTCTCTCATaGGGTGGGACTGCTCGCACTGTGCCTTGGCCAATT +
Preference number: 6 (lower is better)
Translates to: VSFAPGHPHALS*GGTARTVPWPI
Trigger: AATTGGCCAAGGCACAGTGCGAGCAGTCCCACCTCATGAGAGAGCATGAGGATGTCCAGGAGCGAACGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp GGGCTCTCAGTCCCCCAGGTCTCGGAGCTTAAGAGTTaGACTTCACAGGCTCAATATCCACTGCTTGGTCCC +
Preference number: 6 (lower is better)
Translates to: GLSVPQVSELKS*TSQAQYPLLGP
Trigger: GGGACCAAGCAGTGGATATTGAGCCTGTGAAGTCCAACTCTTAAGCTCCGAGACCTGGGGGACTGAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS CAA 72 bp GAGGTCTGGTCTTGGTCCATGCTTCGAGAGTCCTCGTaGACCTCGTGTTGGCTCTGGCTGAGTTCTGATCGC +
Preference number: 6 (lower is better)
Translates to: EVWSWSMLRESS*TSCWLWLSSDR
Trigger: GCGATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGACCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp ATGCACTGCTCGCTGTACTGCAAGGCCAGCCTCAGCGCTGTGGCATaGGATTCGTATTTTCCCACCAGCATGCTCATCCTCTCGGCATTG +
Preference number: 6 (lower is better)
Translates to: MHCSLYCKASLSAVA*DSYFPTSMLILSAL
Trigger: CAATGCCGAGAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS GCA 72 bp CCGCAGACAACATTCTCCAGCCCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCACTGCAGTTGTCCATG +
Preference number: 6 (lower is better)
Translates to: PQTTFSSPVSTL*SSEFRSLQLSM
Trigger: CATGGACAACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGGGCTGGAGAATGTTGTCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS GCA 72 bp AACTCGGCCATCTCCTCCTTCATGGCCATGAGCTCCTaGATAAGCACTGCGTTTTCCAGATCCAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: NSAISSFMAMSS*ISTAFSRSSLW
Trigger: CCAGAGGCTGGATCTGGAAAACGCAGTGCTTATGCAGGAGCTCATGGCCATGAAGGAGGAGATGGCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
ENST00000624689.3
CDS GCA 72 bp CCCTGGCTGCTGATAAGGCACCCAAACTGTTGTCACTaGTCGTGGGCCAGGAAGCAATTCTATCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: PWLLIRHPNCCH*SWARKQFYPSA
Trigger: AGCTGAGGGATAGAATTGCTTCCTGGCCCACGAGCAGTGACAACAGTTTGGGTGCCTTATCAGCAGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS GCA 72 bp CCGCAGACAACATTCTCCAGCCCTGTCAGCACCCTCTaGAGTTCTGAGTTCAGGTCACTGCAGTTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: PQTTFSSPVSTL*SSEFRSLQLSV
Trigger: CACAGACAACTGCAGTGACCTGAACTCAGAACTGCAGAGGGTGCTGACAGGGCTGGAGAATGTTGTCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505604.1
CDS CCA 72 bp CGCTGTACTGCAAGGCCAGCCTCAGCGCTGTGGCATTaGATTCGTATTTTCCCACCAGCATGCTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: RCTARPASALWH*IRIFPPACSSS
Trigger: AGAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGGCCTTGCAGTACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp ACTGCTCGCTGTACTGCAAGGCCAGCCTCAGCGCTGTaGCATTGGATTCGTATTTTCCCACCAGCATGCTCA +
Preference number: 6 (lower is better)
Translates to: TARCTARPASAL*HWIRIFPPACS
Trigger: TGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGGCCTTGCAGTACAGCGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp TCCCTGATGGTGGTGCCTTGCAGACGGTCTATCTTCTaGTTGAGCTCCGCAATGACGCTGTGGAGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SLMVVPCRRSIF*LSSAMTLWSSV
Trigger: CACAGAGCTCCACAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCTGCAAGGCACCACCATCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp TCGCTGTACTGCAAGGCCAGCCTCAGCGCTGTGGCATaGGATTCGTATTTTCCCACCAGCATGCTCATCCTC +
Preference number: 6 (lower is better)
Translates to: SLYCKASLSAVA*DSYFPTSMLIL
Trigger: GAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGCTGAGGCTGGCCTTGCAGTACAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp TCTTCCTCCCTGATGGTGGTGCCTTGCAGACGGTCTATCTTCTTGTaGAGCTCCGCAATGACGCTGTGGAGCTCTGTGATGCGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSSLMVVPCRRSIFL*SSAMTLWSSVMRSS
Trigger: TGAGGAACGCATCACAGAGCTCCACAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCTGCAAGGCACCACCATCAGGGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp TCATCTTCCTCCCTGATGGTGGTGCCTTGCAGACGGTCTATCTTCTaGTTGAGCTCCGCAATGACGCTGTGGAGCTCTGTGATGCGTTCC +
Preference number: 6 (lower is better)
Translates to: SSSSLMVVPCRRSIF*LSSAMTLWSSVMRS
Trigger: GGAACGCATCACAGAGCTCCACAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCTGCAAGGCACCACCATCAGGGAGGAAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS TCA 72 bp TGGCCTTCAACTTCTTTTCTCGACGAATGGCGTTGGTaGACTCCGCAGCCAGCTCATTCTCGCTGCACGTTG +
Preference number: 6 (lower is better)
Translates to: WPSTSFLDEWRW*TPQPAHSRCTL
Trigger: CAACGTGCAGCGAGAATGAGCTGGCTGCGGAGTTCACCAACGCCATTCGTCGAGAAAAGAAGTTGAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp TTCCTCCTACAGAGTTGCCAATGTGCGGGGACTGTGTaGGCAGTTTGTGGAGAGCAGCCTGCTGATGCAAAG +
Preference number: 6 (lower is better)
Translates to: FLLQSCQCAGTV*AVCGEQPADAK
Trigger: CTTTGCATCAGCAGGCTGCTCTCCACAAACTGCTCACACAGTCCCCGCACATTGGCAACTCTGTAGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CCA 72 bp GTTCGCTCCTGGACATCCTCATGCTCTCTCATGAGGTaGGACTGCTCGCACTGTGCCTTGGCCAATTTCTTT +
Preference number: 6 (lower is better)
Translates to: VRSWTSSCSLMR*DCSHCALANFF
Trigger: AAAGAAATTGGCCAAGGCACAGTGCGAGCAGTCCCACCTCATGAGAGAGCATGAGGATGTCCAGGAGCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp TGGTCCATGCTTCGAGAGTCCTCGTTGACCTCGTGTTaGCTCTGGCTGAGTTCTGATCGCAGTTCTGAGTAC +
Preference number: 6 (lower is better)
Translates to: WSMLRESSLTSC*LWLSSDRSSEY
Trigger: GTACTCAGAACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAGCATGGACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp GACTGGTTTTCGGGGATAGAGACAGAGGTCTGGTCTTaGTCCATGCTTCGAGAGTCCTCGTTGACCTCGTGT +
Preference number: 6 (lower is better)
Translates to: DWFSGIETEVWS*SMLRESSLTSC
Trigger: ACACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGACCTCTGTCTCTATCCCCGAAAACCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp AGATGGAGGATCCACAGGATGGGCAGGCACCATGAGTaGGGTCAATCAGTCTTTGCCTCTCCATTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RWRIHRMGRHHE*GQSVFASPFFS
Trigger: GGAGAAGAATGGAGAGGCAAAGACTGATTGACCCCACTCATGGTGCCTGCCCATCCTGTGGATCCTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CAA 72 bp CTGATGGTGGTGCCTTGCAGACGGTCTATCTTCTTGTaGAGCTCCGCAATGACGCTGTGGAGCTCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LMVVPCRRSIFL*SSAMTLWSSVM
Trigger: CATCACAGAGCTCCACAGCGTCATTGCGGAGCTCAACAAGAAGATAGACCGTCTGCAAGGCACCACCATCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp AGACTGGTTTTCGGGGATAGAGACAGAGGTCTGGTCTaGGTCCATGCTTCGAGAGTCCTCGTTGACCTCGTG +
Preference number: 6 (lower is better)
Translates to: RLVFGDRDRGLV*VHASRVLVDLV
Trigger: CACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGACCTCTGTCTCTATCCCCGAAAACCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp TCGATGTGGATGCTTTCCAGCTCCAGCATGGTCAGCTaGACCGCAGCCCTGTCATTCTTGAGCTGCTGGATA +
Preference number: 6 (lower is better)
Translates to: SMWMLSSSSMVS*TAALSFLSCWI
Trigger: TATCCAGCAGCTCAAGAATGACAGGGCTGCGGTCAAGCTGACCATGCTGGAGCTGGAAAGCATCCACATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
ENST00000624689.3
CDS CAA 90 bp ATAGAGACAGAGGTCTGGTCTTGGTCCATGCTTCGAGAGTCCTCGTaGACCTCGTGTTGGCTCTGGCTGAGTTCTGATCGCAGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: IETEVWSWSMLRESS*TSCWLWLSSDRSSE
Trigger: CTCAGAACTGCGATCAGAACTCAGCCAGAGCCAACACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGACCTCTGTCTCTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp AACCATGGTAGACTGGTTTTCGGGGATAGAGACAGAGGTCTGGTCTaGGTCCATGCTTCGAGAGTCCTCGTTGACCTCGTGTTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: NHGRLVFGDRDRGLV*VHASRVLVDLVLAL
Trigger: CAGAGCCAACACGAGGTCAACGAGGACTCTCGAAGCATGGACCAAGACCAGACCTCTGTCTCTATCCCCGAAAACCAGTCTACCATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp GTGTGTGGCCTGGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTGCTaGAGCATCCTCACTTGGGTCTCATGTCTCTCCACCATGGCCATC +
Preference number: 6 (lower is better)
Translates to: VCGLEFSSSSRAILC*SILTWVSCLSTMAI
Trigger: GATGGCCATGGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCAGGCCACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS GCA 72 bp TCAATCTCCTCGACTGTCTTAATAGCCAGGTCACAGTaGTCGCTGGCTGTGGTGAGCTGCTCAATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: SISSTVLIARSQ*SLAVVSCSMCL
Trigger: CAAGCACATTGAGCAGCTCACCACAGCCAGCGAGCACTGTGACCTGGCTATTAAGACAGTCGAGGAGATTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000505604.1
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS GCA 72 bp GGCCTGGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTaGTTGAGCATCCTCACTTGGGTCTCATGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: GLEFSSSSRAIL*LSILTWVSCLS
Trigger: GGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS GCA 72 bp GGCAACTCTGCATCAGATCACAGTAGAGGAGCACACTaGAGCATCTTCCTATGCTTCAGCATGCCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: GNSASDHSRGAH*SIFLCFSMPGK
Trigger: CTTCCCTGGCATGCTGAAGCATAGGAAGATGCTGCAGTGTGCTCCTCTACTGTGATCTGATGCAGAGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515367.6
CDS GCA 72 bp TCAGGCATCTATGGGGGATTTTGGATCATATCACCTTaGCAGGTTTGTCTTTGCTGCCGCTGCTGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SGIYGGFWIISP*QVCLCCRCWWS
Trigger: GCTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAAGGTGATATGATCCAAAATCCCCCATAGATGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS CAA 90 bp AGCCCAGGACTGGCCGATCAGATGATGACGATTCGGACCTTGTCTTaGATAGCTTCACCCTCTCAGCAATCTTGGCGATGGGAATGTCAT +
Preference number: 6 (lower is better)
Translates to: SPGLADQMMTIRTLS*IASPSQQSWRWECH
Trigger: ATGACATTCCCATCGCCAAGATTGCTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAATCGTCATCATCTGATCGGCCAGTCCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp TTTCTGAGCCCAGGACTGGCCGATCAGATGATGACGATTCGGACCTaGTCTTTGATAGCTTCACCCTCTCAGCAATCTTGGCGATGGGAA +
Preference number: 6 (lower is better)
Translates to: FLSPGLADQMMTIRT*SLIASPSQQSWRWE
Trigger: TTCCCATCGCCAAGATTGCTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAATCGTCATCATCTGATCGGCCAGTCCTGGGCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS TCA 72 bp CTGCAGATTGCTGATGTCGGATTTCACTGCTCTTGGTaGGTCTCTCCAAGGCACTCACCAGCTCTTGAACTC +
Preference number: 6 (lower is better)
Translates to: LQIADVGFHCSW*VSPRHSPALEL
Trigger: GAGTTCAAGAGCTGGTGAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAATCCGACATCAGCAATCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp TTACTTCCCATGGGCAGAACTCCGGTGCGTGAGTGCTaGTTAAAGCGAAGTTTCATTGGTGTGTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: LLPMGRTPVREC*LKRSFIGVWPG
Trigger: TCCAGGCCACACACCAATGAAACTTCGCTTTAATCAGCACTCACGCACCGGAGTTCTGCCCATGGGAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp CAAAAGATGGAGGATCCACAGGATGGGCAGGCACCATaGGTGGGGTCAATCAGTCTTTGCCTCTCCATTCTT +
Preference number: 6 (lower is better)
Translates to: QKMEDPQDGQAP*VGSISLCLSIL
Trigger: AAGAATGGAGAGGCAAAGACTGATTGACCCCACTCATGGTGCCTGCCCATCCTGTGGATCCTCCATCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511242.1
CDS CCA 72 bp CTGCAGTTGTCCATGTCAGCAGTAACCATGGTAGACTaGTTTTCGGGGATAGAGACAGAGGTCTGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: LQLSMSAVTMVD*FSGIETEVWSW
Trigger: CCAAGACCAGACCTCTGTCTCTATCCCCGAAAACCAGTCTACCATGGTTACTGCTGACATGGACAACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000502648.5
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp CTGCTGATAAGGCACCCAAACTGTTGTCACTGCTCGTaGGCCAGGAAGCAATTCTATCCCTCAGCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: LLIRHPNCCHCS*ARKQFYPSASL
Trigger: CAAAGAAGCTGAGGGATAGAATTGCTTCCTGGCCCACGAGCAGTGACAACAGTTTGGGTGCCTTATCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CAA 72 bp CTGGCCGATCAGATGATGACGATTCGGACCTTGTCTTaGATAGCTTCACCCTCTCAGCAATCTTGGCGATGG +
Preference number: 6 (lower is better)
Translates to: LADQMMTIRTLS*IASPSQQSWRW
Trigger: CCATCGCCAAGATTGCTGAGAGGGTGAAGCTATCAAAGACAAGGTCCGAATCGTCATCATCTGATCGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp CTGGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTGCTaGAGCATCCTCACTTGGGTCTCATGTCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: LEFSSSSRAILC*SILTWVSCLST
Trigger: GGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CAA 72 bp TTCAGGCATCTATGGGGGATTTTGGATCATATCACCTaGCCAGGTTTGTCTTTGCTGCCGCTGCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: FRHLWGILDHIT*PGLSLLPLLVE
Trigger: CTCCACCAGCAGCGGCAGCAAAGACAAACCTGGCAAGGTGATATGATCCAAAATCCCCCATAGATGCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS CAA 90 bp GATTTCACTGCTCTTGGTGAGTCTCTCCAAGGCACTCACCAGCTCTaGAACTCTGGCCTTCAACTTCTTTTCTCGACGAATGGCGTTGGT +
Preference number: 6 (lower is better)
Translates to: DFTALGESLQGTHQL*NSGLQLLFSTNGVG
Trigger: ACCAACGCCATTCGTCGAGAAAAGAAGTTGAAGGCCAGAGTTCAAGAGCTGGTGAGTGCCTTGGAGAGACTCACCAAGAGCAGTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp AGTGTTTGGAAAATCTCTTGGATATTGGAGCAGTCCTaGAGTGAGTGGGCCAGGTGTTCAGCCACACTGCTG +
Preference number: 6 (lower is better)
Translates to: SVWKISWILEQS*SEWARCSATLL
Trigger: CAGCAGTGTGGCTGAACACCTGGCCCACTCACTTCAGGACTGCTCCAATATCCAAGAGATTTTCCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS TCA 72 bp CTCTTGGTGAGTCTCTCCAAGGCACTCACCAGCTCTTaGACTCTGGCCTTCAACTTCTTTTCTCGACGAATG +
Preference number: 6 (lower is better)
Translates to: LLVSLSKALTSS*TLAFNFFSRRM
Trigger: CATTCGTCGAGAAAAGAAGTTGAAGGCCAGAGTTCAAGAGCTGGTGAGTGCCTTGGAGAGACTCACCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp GCCCGCTTTAGATCATTCACGAACTCTGCAGATTGCTaGTGTCGGATTTCACTGCTCTTGGTGAGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: ARFRSFTNSADC*CRISLLLVSLS
Trigger: GGAGAGACTCACCAAGAGCAGTGAAATCCGACATCAGCAATCTGCAGAGTTCGTGAATGATCTAAAGCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp TGGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTGCTTaGGCATCCTCACTTGGGTCTCATGTCTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: WSSPPLAELFFA*ASSLGSHVSPP
Trigger: TGGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp CTGCAGTTTACTTCCCATGGGCAGAACTCCGGTGCGTaGGTGCTGATTAAAGCGAAGTTTCATTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: LQFTSHGQNSGA*VLIKAKFHWCV
Trigger: CACACACCAATGAAACTTCGCTTTAATCAGCACTCACGCACCGGAGTTCTGCCCATGGGAAGTAAACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS GCA 72 bp GCGCTGTGGCATTGGATTCGTATTTTCCCACCAGCATaGTCATCCTCTCGGCATTGCTTTTACATTCCTCCA +
Preference number: 6 (lower is better)
Translates to: ALWHWIRIFPPA*SSSRHCFYIPP
Trigger: TGGAGGAATGTAAAAGCAATGCCGAGAGGATGAGCATGCTGGTGGGAAAATACGAATCCAATGCCACAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS GCA 72 bp ATTCCCAAAATTACAAATGCCACAAAATTCTCACGGTaGCCCTGGTGCTATACACCAGCCTCTCTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: IPKITNATKFSR*PWCYTPASLSP
Trigger: GGGGCTGAGAGAGGCTGGTGTATAGCACCAGGGGCACCGTGAGAATTTTGTGGCATTTGTAATTTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502648.5
ENST00000505604.1
CDS CCA 72 bp TCTAGCAGAGCTATTCTTTGCTTGAGCATCCTCACTTaGGTCTCATGTCTCTCCACCATGGCCATCATCTGC +
Preference number: 6 (lower is better)
Translates to: SSRAILCLSILT*VSCLSTMAIIC
Trigger: GCAGATGATGGCCATGGTGGAGAGACATGAGACCCAAGTGAGGATGCTCAAGCAAAGAATAGCTCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CAA 72 bp GCTCTTGGTGAGTCTCTCCAAGGCACTCACCAGCTCTaGAACTCTGGCCTTCAACTTCTTTTCTCGACGAAT +
Preference number: 6 (lower is better)
Translates to: ALGESLQGTHQL*NSGLQLLFSTN
Trigger: ATTCGTCGAGAAAAGAAGTTGAAGGCCAGAGTTCAAGAGCTGGTGAGTGCCTTGGAGAGACTCACCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS TCA 72 bp AGTCGTTTCCATATTTCATGGCAACTCCGGAATTCATaGTGCACTTTTCAGAGCTGGGCTCTCAGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: SRFHISWQLRNS*CTFQSWALSPP
Trigger: TGGGGGACTGAGAGCCCAGCTCTGAAAAGTGCATCATGAATTCCGGAGTTGCCATGAAATATGGAAACGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302475.8
ENST00000514701.5
CDS TCA 72 bp CCTCCAAGGTTATGGTCAGGAGGTCATTTTGGGATTTaGGGTGCTCAATCCGGCTATTCAGCCGTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: PPRLWSGGHFGI*GAQSGYSAVLF
Trigger: AAACAGAACGGCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAATGACCTCCTGACCATAACCTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 90 bp TGTCACTGCTCGTGGGCCAGGAAGCAATTCTATCCCTCAGCTTCTTaGTACAGGAGTTGTCTGACTTTGCAGAAAGATCTACTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: CHCSWARKQFYPSAS*YRSCLTLQKDLLPP
Trigger: AGGAGGAAGTAGATCTTTCTGCAAAGTCAGACAACTCCTGTACAAAGAAGCTGAGGGATAGAATTGCTTCCTGGCCCACGAGCAGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CAA 90 bp GGCATTGCTTTTACATTCCTCCAAGGTTATGGTCAGGAGGTCATTTaGGGATTTGAGGTGCTCAATCCGGCTATTCAGCCGTTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: GIAFTFLQGYGQEVI*GFEVLNPAIQPFCF
Trigger: GAAACAGAACGGCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAATGACCTCCTGACCATAACCTTGGAGGAATGTAAAAGCAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp TTACATTCCTCCAAGGTTATGGTCAGGAGGTCATTTTaGGATTTGAGGTGCTCAATCCGGCTATTCAGCCGT +
Preference number: 6 (lower is better)
Translates to: LHSSKVMVRRSF*DLRCSIRLFSR
Trigger: ACGGCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAATGACCTCCTGACCATAACCTTGGAGGAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CCA 72 bp GTGCTGATTAAAGCGAAGTTTCATTGGTGTGTGGCCTaGAGTTCTCCTCCTCTAGCAGAGCTATTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: VLIKAKFHWCVA*SSPPLAELFFA
Trigger: AGCAAAGAATAGCTCTGCTAGAGGAGGAGAACTCCAGGCCACACACCAATGAAACTTCGCTTTAATCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000515367.6
CDS CAA 72 bp TTTACATTCCTCCAAGGTTATGGTCAGGAGGTCATTTaGGGATTTGAGGTGCTCAATCCGGCTATTCAGCCG +
Preference number: 6 (lower is better)
Translates to: FTFLQGYGQEVI*GFEVLNPAIQP
Trigger: CGGCTGAATAGCCGGATTGAGCACCTCAAATCCCAAAATGACCTCCTGACCATAACCTTGGAGGAATGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp TCGTGGGCCAGGAAGCAATTCTATCCCTCAGCTTCTTaGTACAGGAGTTGTCTGACTTTGCAGAAAGATCTA +
Preference number: 6 (lower is better)
Translates to: SWARKQFYPSAS*YRSCLTLQKDL
Trigger: TAGATCTTTCTGCAAAGTCAGACAACTCCTGTACAAAGAAGCTGAGGGATAGAATTGCTTCCTGGCCCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CAA 90 bp GTGGGCCAGGAAGCAATTCTATCCCTCAGCTTCTTTGTACAGGAGTaGTCTGACTTTGCAGAAAGATCTACTTCCTCCTTCCTAATTTCT +
Preference number: 6 (lower is better)
Translates to: VGQEAILSLSFFVQE*SDFAERSTSSFLIS
Trigger: AGAAATTAGGAAGGAGGAAGTAGATCTTTCTGCAAAGTCAGACAACTCCTGTACAAAGAAGCTGAGGGATAGAATTGCTTCCTGGCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7
CDS CAA 72 bp AGTATTACCTGTGGTTTCAGGCATCTATGGGGGATTTaGGATCATATCACCTTGCCAGGTTTGTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: SITCGFRHLWGI*DHITLPGLSLL
Trigger: CAGCAAAGACAAACCTGGCAAGGTGATATGATCCAAAATCCCCCATAGATGCCTGAAACCACAGGTAATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624689.3
CDS GCA 72 bp AATTTCTTTTCCAGAAGGTCCCGTTCCCTCTCTGTTTaGTGGAGACGTTTATTAAGTTCCACTATATCTCCC +
Preference number: 6 (lower is better)
Translates to: NFFSRRSRSLSV*WRRLLSSTISP
Trigger: GGGAGATATAGTGGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGGGACCTTCTGGAAAAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp CAATTTCTTTTCCAGAAGGTCCCGTTCCCTCTCTGTTaGCTGGAGACGTTTATTAAGTTCCACTATATCTCC +
Preference number: 6 (lower is better)
Translates to: QFLFQKVPFPLC*LETFIKFHYIS
Trigger: GGAGATATAGTGGAACTTAATAAACGTCTCCAGCAAACAGAGAGGGAACGGGACCTTCTGGAAAAGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302475.8
ENST00000408903.7
ENST00000506605.6
ENST00000511847.2
ENST00000514701.5
ENST00000515367.6
CDS CAA 72 bp GAAGCAATTCTATCCCTCAGCTTCTTTGTACAGGAGTaGTCTGACTTTGCAGAAAGATCTACTTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: EAILSLSFFVQE*SDFAERSTSSF
Trigger: GAAGGAGGAAGTAGATCTTTCTGCAAAGTCAGACAACTCCTGTACAAAGAAGCTGAGGGATAGAATTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408903.7