RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MC2R (Homo sapiens)

Ensembl gene IDs: ENSG00000185231

Ensembl transcript IDs: ENST00000327606.4, ENST00000399821.2

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACAAGAAGGTGCACCTTTCACCTCCATCTGTGGGACAGGCCATGTaGAAGCACGCCTGCCACTGTCCTCACTTGACTCCAGCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: DKKVHLSPPSVGQAM*KHACHCPHLTPAAL
Trigger: CAAGGCAGCTGGAGTCAAGTGAGGACAGTGGCAGGCGTGCTTTCACATGGCCTGTCCCACAGATGGAGGTGAAAGGTGCACCTTCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp TCTTCTGCCTGGAGTCGCATGTCCAGGTACTTAACTTCTGGAAATTaGCTGCAATGGCCTCCACCTGGAAAGGCCACCTCAGAACTGGCT +
Preference number: 1 (lower is better)
Translates to: SSAWSRMSRYLTSGN*LQWPPPGKATSELA
Trigger: AGCCAGTTCTGAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCAGGCAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp CCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTAACTTCTaGAAATTGGCTGCAATGGCCTCCACCTGGAAAGGCCACCTCAGA +
Preference number: 1 (lower is better)
Translates to: PYIFCLESHVQVLNF*KLAAMASTWKGHLR
Trigger: TCTGAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 90 bp AGGATCAAACAGGGAAGGATTTCTACAGAACAGAGGACAAGAAGGTaGACCTTTCACCTCCATCTGTGGGACAGGCCATGTGAAAGCACG +
Preference number: 1 (lower is better)
Translates to: RIKQGRISTEQRTRR*TFHLHLWDRPCEST
Trigger: CGTGCTTTCACATGGCCTGTCCCACAGATGGAGGTGAAAGGTGCACCTTCTTGTCCTCTGTTCTGTAGAAATCCTTCCCTGTTTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp GTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTaGAAAGGCCACCTCAGAACTGGCTTGTTAGATGTCCACAGGAAA +
Preference number: 1 (lower is better)
Translates to: VQVLNFWKLAAMAST*KGHLRTGLLDVHRK
Trigger: TTTCCTGTGGACATCTAACAAGCCAGTTCTGAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp GCATCCATTAGGGAAGGAAGGCCAGTGAGGAGCACTGGCATTTGTTaGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGG +
Preference number: 1 (lower is better)
Translates to: ASIREGRPVRSTGIC*NVTLFWHLATLFPW
Trigger: CCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCTCACTGGCCTTCCTTCCCTAATGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp ATACATCAGACTAACAGGGAGAAAGAGGAGGGTGGAGATTCCACATaGCTGTGGGAGACAGACAAATTCAGCTGCAGCAATGCATTCCTT +
Preference number: 1 (lower is better)
Translates to: IHQTNREKEEGGDST*LWETDKFSCSNAFL
Trigger: AAGGAATGCATTGCTGCAGCTGAATTTGTCTGTCTCCCACAGCCATGTGGAATCTCCACCCTCCTCTTTCTCCCTGTTAGTCTGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp AGGCCAGTGAGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTaGCACTTGGCAACGTTATTCCCATGGATTCTAAAACCAGGGATC +
Preference number: 1 (lower is better)
Translates to: RPVRSTGICWNVTLF*HLATLFPWILKPGI
Trigger: GATCCCTGGTTTTAGAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCTCACTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp ACAGACAAATTCAGCTGCAGCAATGCATTCCTTCCAATTTATTATTaGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCA +
Preference number: 1 (lower is better)
Translates to: TDKFSCSNAFLPIYY*LTETLHLLPGVACP
Trigger: TGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATAAATTGGAAGGAATGCATTGCTGCAGCTGAATTTGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 90 bp TGCACAGCAGAGAGCTTGAGAGTGATTAGGAGACAGCAAAGCTGTTaGCAAAGGCAGAATTTTATAGGAAGAGCAGTTTGGGACTATTTA +
Preference number: 1 (lower is better)
Translates to: CTAESLRVIRRQQSC*QRQNFIGRAVWDYL
Trigger: TAAATAGTCCCAAACTGCTCTTCCTATAAAATTCTGCCTTTGTCAACAGCTTTGCTGTCTCCTAATCACTCTCAAGCTCTCTGCTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 90 bp TTATTAGACAGGGCTCAGAATTACTATCAGCTTGAGTACACATCCTaGACATTTTCAGCTATCTGGTCCAAGGCTAGGTCATCGATAAAG +
Preference number: 1 (lower is better)
Translates to: LLDRAQNYYQLEYTS*TFSAIWSKARSSIK
Trigger: CTTTATCGATGACCTAGCCTTGGACCAGATAGCTGAAAATGTTCAGGATGTGTACTCAAGCTGATAGTAATTCTGAGCCCTGTCTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp TTTGACATTTATAGTTTATACTCAGCCTACTTTCTGAAACTGAGGTaGCATCAATACATCAGACTAACAGGGAGAAAGAGGAGGGTGGAG +
Preference number: 1 (lower is better)
Translates to: FDIYSLYSAYFLKLR*HQYIRLTGRKRRVE
Trigger: CTCCACCCTCCTCTTTCTCCCTGTTAGTCTGATGTATTGATGCCACCTCAGTTTCAGAAAGTAGGCTGAGTATAAACTATAAATGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 90 bp TTTTATAGGAAGAGCAGTTTGGGACTATTTATGATACAGGTTAAGTaGCATTGCTTACCTCTGTGGTATCACAGAGCATTGCAGCATCAA +
Preference number: 1 (lower is better)
Translates to: FYRKSSLGLFMIQVK*HCLPLWYHRALQHQ
Trigger: TTGATGCTGCAATGCTCTGTGATACCACAGAGGTAAGCAATGCCACTTAACCTGTATCATAAATAGTCCCAAACTGCTCTTCCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 90 bp ATCTTCATTTTGTTTCTTAGATTAACTGCAACAAATCAAAGGCAGTaGGAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCAC +
Preference number: 1 (lower is better)
Translates to: IFILFLRLTATNQRQ*EVKFLGDFPSDNSH
Trigger: GTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTCTCACTGCCTTTGATTTGTTGCAGTTAATCTAAGAAACAAAATGAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 90 bp TTTGATAAAAGAATTAAGTCCTCATGGGAAAAGTCTGAAGCTTGTTaGTCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATT +
Preference number: 1 (lower is better)
Translates to: FDKRIKSSWEKSEAC*SSSHKYVQFGGAFI
Trigger: AATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAACAAGCTTCAGACTTTTCCCATGAGGACTTAATTCTTTTATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 90 bp ATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTAACTTCTGGAAATaGGCTGCAATGGCCTCCACCTGGAAAGGCCACCTCAGAACTGGC +
Preference number: 2 (lower is better)
Translates to: IFCLESHVQVLNFWK*AAMASTWKGHLRTG
Trigger: GCCAGTTCTGAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCAGGCAGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 90 bp CTTCTCCCCTCAGCAGCTCTGGGAAATTCTCCTGAGGGCAAAGCATaGCCTGTTCTGGAAGATACCATCCATCCTGCAGATCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: LLPSAALGNSPEGKA*PVLEDTIHPADPEP
Trigger: AGGCTCAGGATCTGCAGGATGGATGGTATCTTCCAGAACAGGCAATGCTTTGCCCTCAGGAGAATTTCCCAGAGCTGCTGAGGGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR GCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAAGGAAAGCAAGTCTTTaGCTTAGCCCAAAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGRKASL*LSPKPL
Trigger: CAAGGGCTTTGGGCTAAGGCAAAGACTTGCTTTCCT...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR GCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATAGACCCTACATCTTCTaGCTGGAGTCGCATGTCCAG +
Preference number: 2 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNRPYIF*LESHVQ
Trigger: CTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATGCCAGTGAGGAGCACTaGCATTTGTTGGAATGTTAC +
Preference number: 2 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNASEEH*HLLECY
Trigger: GTAACATTCCAACAAATGCCAGTGCTCCTCACTGGC...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp ATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTAGAAACACTAGCTGGTaGGATCATCCTTGCATCCAT +
Preference number: 2 (lower is better)
Translates to: IGLQRPYIFCLESHVQVLRNTSW*DHPCIH
Trigger: ATGGATGCAAGGATGATCCCACCAGCTAGTGTTTCT...AAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTTTAACTTCTGGAAATTaGCTGCAATGGCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: YYWLTETLHLLPGVACPGLTSGN*LQWPPP
Trigger: AGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAA...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGATTTCACCTCCATCTGTaGGACAGGCCATGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRFHLHL*DRPCES
Trigger: GCTTTCACATGGCCTGTCCCACAGATGGAGGTGAAA...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 90 bp GTGAGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTaGGCAACGTTATTCCCATGGATTCTAAAACCAGGGATCAGCCAT +
Preference number: 2 (lower is better)
Translates to: VRSTGICWNVTLFWH*ATLFPWILKPGISH
Trigger: ATGGCTGATCCCTGGTTTTAGAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 90 bp GACAGACAAATTCAGCTGCAGCAATGCATTCCTTCCAATTTATTATaGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCC +
Preference number: 2 (lower is better)
Translates to: DRQIQLQQCIPSNLL*AYRDPTSSAWSRMS
Trigger: GGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATAAATTGGAAGGAATGCATTGCTGCAGCTGAATTTGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTATTAGAAACACTAGCTaGTGGGATCATCCTTGCATC +
Preference number: 2 (lower is better)
Translates to: YYWLTETLHLLPGVACPGIRNTS*WDHPCI
Trigger: GATGCAAGGATGATCCCACCAGCTAGTGTTTCTAAT...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGAGATTCCACATGGCTGTaGGAGACAGACAAATTCAGC +
Preference number: 2 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRDSTWL*ETDKFS
Trigger: GCTGAATTTGTCTGTCTCCCACAGCCATGTGGAATC...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATAGCACTGGCATTTGTTaGAATGTTACACTATTCTGG +
Preference number: 2 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNSTGIC*NVTLFW
Trigger: CCAGAATAGTGTAACATTCCAACAAATGCCAGTGCT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGAAAGCATTGCCTGTTCTaGAAGATACCATCCATCCTG +
Preference number: 2 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRKHCLF*KIPSIL
Trigger: CAGGATGGATGGTATCTTCCAGAACAGGCAATGCTT...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR GCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTTCACTTGACTCCAGCTaGCTTGCCTCCTTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGISLDSS*LASFAS
Trigger: AGAAGCAAAGGAGGCAAGGCAGCTGGAGTCAAGTGA...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTTCCCCTCAGCAGCTCTaGGAAATTCTCCTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVSPQQL*EILLRA
Trigger: TGCCCTCAGGAGAATTTCCCAGAGCTGCTGAGGGGA...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR GCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATATTCAGCTGCAGCAATaGATTCCTTCCAATTTATTA +
Preference number: 2 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNIQLQQ*IPSNLL
Trigger: TAATAAATTGGAAGGAATGCATTGCTGCAGCTGAAT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTCCTACATCTTCTGCCTaGAGTCGCATGTCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVPTSSA*SRMSRY
Trigger: GTACCTGGACATGCGACTCCAGGCAGAAGATGTAGG...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR GCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGAACAAAGTTAAGAGGTTaGCCCTACAATAAGACTGTT +
Preference number: 2 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRTKLRG*PYNKTV
Trigger: AACAGTCTTATTGTAGGGGCAACCTCTTAACTTTGT...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR GCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTACAGAGGACAAGAAGGTaGACCTTTCACCTCCATCTG +
Preference number: 2 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVQRTRR*TFHLHL
Trigger: CAGATGGAGGTGAAAGGTGCACCTTCTTGTCCTCTG...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAATCTGCAGAATGAGGTaGTGTTTGCCTCCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVICRMR*CLPPSG
Trigger: ACCTGAGGGAGGCAAACACCACCTCATTCTGCAGAT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 90 bp ACAGCAAAGCTGTTGACAAAGGCAGAATTTTATAGGAAGAGCAGTTaGGGACTATTTATGATACAGGTTAAGTGGCATTGCTTACCTCTG +
Preference number: 2 (lower is better)
Translates to: TAKLLTKAEFYRKSS*GLFMIQVKWHCLPL
Trigger: CAGAGGTAAGCAATGCCACTTAACCTGTATCATAAATAGTCCCAAACTGCTCTTCCTATAAAATTCTGCCTTTGTCAACAGCTTTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR TCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAAGTAACTATGAGCCCTaGAGCTTCTGTTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVSNYEP*SFCSDW
Trigger: CCAATCAGAACAGAAGCTTCAGGGCTCATAGTTACT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTCAGGTACTTAACTTCTaGAAATTGGCTGCAATGGCC +
Preference number: 2 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVQVLNF*KLAAMA
Trigger: GGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTG...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTCTCAGGTCTTTGACTTaGGGCTATAATAACAGCACC +
Preference number: 2 (lower is better)
Translates to: DWNIAEDLELKMSGIASSLRSLT*GYNNST
Trigger: GGTGCTGTTATTATAGCCCCAAGTCAAAGACCTGAG...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTCATTGCTTACCTCTGTaGTATCACAGAGCATTGCAG +
Preference number: 2 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVHCLPL*YHRALQ
Trigger: CTGCAATGCTCTGTGATACCACAGAGGTAAGCAATG...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR TCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTTATGCTCATAAAGCATaGGGAAATGTAACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIYAHKA*GNVTGK
Trigger: CTTTCCTGTTACATTTCCTCATGCTTTATGAGCATA...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR TCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAACAAATCAAAGGCAGTaGGAGGTGAAGTTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVTNQRQ*EVKFLG
Trigger: ACCAAGAAACTTCACCTCTCACTGCCTTTGATTTGT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTGCAACGTTATTCCCATaGATTCTAAAACCAGGGATC +
Preference number: 2 (lower is better)
Translates to: DWNIAEDLELKMSGIASSATLFP*ILKPGI
Trigger: GATCCCTGGTTTTAGAATCCATGGGAATAACGTTGC...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTAATGTTACACTATTCTaGCACTTGGCAACGTTATTC +
Preference number: 2 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGINVTLF*HLATLF
Trigger: GAATAACGTTGCCAAGTGCCAGAATAGTGTAACATT...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTACATTTCCCAGTGACTaGGTCTGCTTTCACATTCAT +
Preference number: 2 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVTFPSD*VCFHIH
Trigger: ATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGT...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 90 bp TTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTaGGAATTCTATATGAAGTTAGAGGTAGAAAAACGTGAGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LIFLTQICAVWWCFH*EFYMKLEVEKREFS
Trigger: AGAAAACTCACGTTTTTCTACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR TCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAGTTTGGGACTATTTATaGTACAGGTTAAGTGGCATT +
Preference number: 2 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVVWDYL*YRLSGI
Trigger: AATGCCACTTAACCTGTATCATAAATAGTCCCAAAC...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTTTTCTGAAACTGAGGTaGCATCAATACATCAGACTA +
Preference number: 2 (lower is better)
Translates to: DWNIAEDLELKMSGIASSFLKLR*HQYIRL
Trigger: TAGTCTGATGTATTGATGCCACCTCAGTTTCAGAAA...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 72 bp GTGCACCTTTCACCTCCATCTGTGGGACAGGCCATGTaGAAGCACGCCTGCCACTGTCCTCACTTGACTCCA +
Preference number: 3 (lower is better)
Translates to: VHLSPPSVGQAM*KHACHCPHLTP
Trigger: TGGAGTCAAGTGAGGACAGTGGCAGGCGTGCTTTCACATGGCCTGTCCCACAGATGGAGGTGAAAGGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp AAAGCACGCCTGCCACTGTCCTCACTTGACTCCAGCTaGCTTGCCTCCTTTGCTTCTGAAGTTCCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: KARLPLSSLDSS*LASFASEVPVP
Trigger: AGGGACAGGAACTTCAGAAGCAAAGGAGGCAAGGCAGCTGGAGTCAAGTGAGGACAGTGGCAGGCGTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp TGGAGTCGCATGTCCAGGTACTTAACTTCTGGAAATTaGCTGCAATGGCCTCCACCTGGAAAGGCCACCTCA +
Preference number: 3 (lower is better)
Translates to: WSRMSRYLTSGN*LQWPPPGKATS
Trigger: TGAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp TTCTGCCTGGAGTCGCATGTCCAGGTACTTAACTTCTaGAAATTGGCTGCAATGGCCTCCACCTGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: FCLESHVQVLNF*KLAAMASTWKG
Trigger: GCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCAGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp CAGGGAAGGATTTCTACAGAACAGAGGACAAGAAGGTaGACCTTTCACCTCCATCTGTGGGACAGGCCATGT +
Preference number: 3 (lower is better)
Translates to: QGRISTEQRTRR*TFHLHLWDRPC
Trigger: ACATGGCCTGTCCCACAGATGGAGGTGAAAGGTGCACCTTCTTGTCCTCTGTTCTGTAGAAATCCTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp CATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTaGAGAATGAGGTGGTGTTTGCCTCCCTCAGGTCTT +
Preference number: 3 (lower is better)
Translates to: HFPVTGSAFTFI*RMRWCLPPSGL
Trigger: AAGACCTGAGGGAGGCAAACACCACCTCATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp CTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTaGAAAGGCCACCTCAGAACTGGCTTGTTAGATGTC +
Preference number: 3 (lower is better)
Translates to: LNFWKLAAMAST*KGHLRTGLLDV
Trigger: GACATCTAACAAGCCAGTTCTGAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGACCTGAGGGCAAAGCATaGCCTGTTCTGGAAGATACC +
Preference number: 3 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRPEGKA*PVLEDT
Trigger: GGTATCTTCCAGAACAGGCAATGCTTTGCCCTCAGG...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGACTTAACTTCTGGAAATaGGCTGCAATGGCCTCCACC +
Preference number: 3 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRLNFWK*AAMAST
Trigger: GGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAG...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 72 bp TGCAGAATGAGGTGGTGTTTGCCTCCCTCAGGTCTTTaGCTTGGGGCTATAATAACAGCACCATTGCTTGAT +
Preference number: 3 (lower is better)
Translates to: CRMRWCLPPSGL*LGAIITAPLLD
Trigger: ATCAAGCAATGGTGCTGTTATTATAGCCCCAAGTCAAAGACCTGAGGGAGGCAAACACCACCTCATTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATGAGGAGCACTGGCATTaGTTGGAATGTTACACTATT +
Preference number: 3 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNEEHWH*LECYTI
Trigger: AATAGTGTAACATTCCAACAAATGCCAGTGCTCCTC...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp CAATTTATTATTGGCTTACAGAGACCCTACATCTTCTaGCTGGAGTCGCATGTCCAGGTACTTAACTTCTGG +
Preference number: 3 (lower is better)
Translates to: QFIIGLQRPYIF*LESHVQVLNFW
Trigger: CCAGAAGTTAAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGATGTCTTGCTTTGGTTTaGGTTTTCCCCATAGTCCAA +
Preference number: 3 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRCLALV*VFPIVQ
Trigger: TTGGACTATGGGGAAAACCAAAACCAAAGCAAGACA...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp TTATTATTGGCTTACAGAGACCCTACATCTTCTGCCTaGAGTCGCATGTCCAGGTACTTAACTTCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: LLLAYRDPTSSA*SRMSRYLTSGN
Trigger: ATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp CATCGTTTTATCTGTCCAGTCACAAAGTTAAGAGGTTaGCCCTACAATAAGACTGTTCACATAGAACCTAGC +
Preference number: 3 (lower is better)
Translates to: HRFICPVTKLRG*PYNKTVHIEPS
Trigger: GCTAGGTTCTATGTGAACAGTCTTATTGTAGGGGCAACCTCTTAACTTTGTGACTGGACAGATAAAACGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp AGTTTGGGACTATTTATGATACAGGTTAAGTGGCATTaGTTACCTCTGTGGTATCACAGAGCATTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: SLGLFMIQVKWH*LPLWYHRALQH
Trigger: ATGCTGCAATGCTCTGTGATACCACAGAGGTAAGCAATGCCACTTAACCTGTATCATAAATAGTCCCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTaGCACTTGGCAACGTTATTCCCATGGATTCTAAAA +
Preference number: 3 (lower is better)
Translates to: RSTGICWNVTLF*HLATLFPWILK
Trigger: TTTTAGAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp AAGAGCAGTTTGGGACTATTTATGATACAGGTTAAGTaGCATTGCTTACCTCTGTGGTATCACAGAGCATTG +
Preference number: 3 (lower is better)
Translates to: KSSLGLFMIQVK*HCLPLWYHRAL
Trigger: CAATGCTCTGTGATACCACAGAGGTAAGCAATGCCACTTAACCTGTATCATAAATAGTCCCAAACTGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTGAGCACTGGCATTTGTaGGAATGTTACACTATTCTG +
Preference number: 3 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIEHWHL*ECYTIL
Trigger: CAGAATAGTGTAACATTCCAACAAATGCCAGTGCTC...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTACACCTCAGAACTGGCTaGTTAGATGTCCACAGGAAA +
Preference number: 3 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVHLRTG*LDVHRK
Trigger: TTTCCTGTGGACATCTAACAAGCCAGTTCTGAGGTG...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp TATAGTTTATACTCAGCCTACTTTCTGAAACTGAGGTaGCATCAATACATCAGACTAACAGGGAGAAAGAGG +
Preference number: 3 (lower is better)
Translates to: YSLYSAYFLKLR*HQYIRLTGRKR
Trigger: CCTCTTTCTCCCTGTTAGTCTGATGTATTGATGCCACCTCAGTTTCAGAAAGTAGGCTGAGTATAAACTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 72 bp CAGAATTTTATAGGAAGAGCAGTTTGGGACTATTTATaGTACAGGTTAAGTGGCATTGCTTACCTCTGTGGT +
Preference number: 3 (lower is better)
Translates to: QNFIGRAVWDYL*YRLSGIAYLCG
Trigger: ACCACAGAGGTAAGCAATGCCACTTAACCTGTATCATAAATAGTCCCAAACTGCTCTTCCTATAAAATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAAGTAACATAGTTCATTaGGCAGGGGAAGGATCAAAC +
Preference number: 3 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVSNIVH*AGEGSN
Trigger: GTTTGATCCTTCCCCTGCCAAATGAACTATGTTACT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR TCA 72 bp TTGTTTCTTAGATTAACTGCAACAAATCAAAGGCAGTaGGAGGTGAAGTTTCTTGGTGATTTTCCTTCTGAC +
Preference number: 3 (lower is better)
Translates to: LFLRLTATNQRQ*EVKFLGDFPSD
Trigger: GTCAGAAGGAAAATCACCAAGAAACTTCACCTCTCACTGCCTTTGATTTGTTGCAGTTAATCTAAGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR GCA 72 bp AGTCTGAAGCTTGTTGATCTTCCTCACACAAATATGTaGAGTTTGGTGGTGCTTTCATTTGGAATTCTATAT +
Preference number: 3 (lower is better)
Translates to: SLKLVDLPHTNM*SLVVLSFGILY
Trigger: ATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAACAAGCTTCAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CCA 72 bp AGCTTGTTGATCTTCCTCACACAAATATGTGCAGTTTaGTGGTGCTTTCATTTGGAATTCTATATGAAGTTA +
Preference number: 3 (lower is better)
Translates to: SLLIFLTQICAV*WCFHLEFYMKL
Trigger: TAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAACAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp ATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTGTGGGACAGGCCATGTaGAAGCACGCCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: IGLQRPYIFCLESHVQVLVGQAM*KHACHC
Trigger: ACAGTGGCAGGCGTGCTTTCACATGGCCTGTCCCAC...AAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 72 bp CTGGAGTCGCATGTCCAGGTACTTAACTTCTGGAAATaGGCTGCAATGGCCTCCACCTGGAAAGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LESHVQVLNFWK*AAMASTWKGHL
Trigger: GAGGTGGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCGACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAGTCATCAAGAGGACATaGAGCACAAAGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGVIKRT*STKGAQ
Trigger: CTGGGCCCCCTTTGTGCTTCATGTCCTCTTGATGAC...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTAGGCGCATGGTCACGATaGTGTGGTACCGCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLGAWSR*CGTAVR
Trigger: ACGCACTGCGGTACCACAGCATCGTGACCATGCGCC...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGATATTCCTACTGGGGTTaGCACTCTTCCATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGYSYWG*HSSIAG
Trigger: GCCAGCAATGGAAGAGTGGCAACCCCAGTAGGAATA...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATGGCTCTGGGGAGGGTaGAGATCTTCCTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLWLWGG*RSSWCG
Trigger: CCCACACCAGGAAGATCTCCACCCTCCCCAGAGCCA...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTTCCCCTCAGCAGCTCTaGGAAATTCTCCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YYWLTETLHLLPGVACPGSPQQL*EILLRA
Trigger: TGCCCTCAGGAGAATTTCCCAGAGCTGCTGAGGGGA...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGATTTCACCTCCATCTGTaGGACAGGCCATGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGFHLHL*DRPCES
Trigger: GCTTTCACATGGCCTGTCCCACAGATGGAGGTGAAA...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGGGCCCAGCAGAAGATaGAGACCCCGAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFGPSRR*RPRAGW
Trigger: CCATCCTGCTCGGGGTCTTCATCTTCTGCTGGGCCC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTAGACCCTACATCTTCTaGCTGGAGTCGCATGTCCAG +
Preference number: 4 (lower is better)
Translates to: YYWLTETLHLLPGVACPGRPYIF*LESHVQ
Trigger: CTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCT...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGAGGGTGGAGATCTTCCTaGTGTGGGATCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRGWRSS*CGIEPA
Trigger: TGCTGGCTCGATCCCACACCAGGAAGATCTCCACCC...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATCTTTCATGTTGGCTCTaGGGAGGGTGGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNLSCWL*GGWRSS
Trigger: GGAAGATCTCCACCCTCCCCAGAGCCAACATGAAAG...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAGCAGTAGGGGTTACTTaGGCAGAATGTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGAVGVT*AECHQE
Trigger: CTCTTGATGACATTCTGCCCAAGTAACCCCTACTGC...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 72 bp TCAGCAGCTCTGGGAAATTCTCCTGAGGGCAAAGCATaGCCTGTTCTGGAAGATACCATCCATCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SAALGNSPEGKA*PVLEDTIHPAD
Trigger: ATCTGCAGGATGGATGGTATCTTCCAGAACAGGCAATGCTTTGCCCTCAGGAGAATTTCCCAGAGCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTAAGAAGATCACCATGGTaGTGCCAGTCCCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLRRSPW*CQSPCR
Trigger: TCTGCACGGGGACTGGCATCACCATGGTGATCTTCT...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATGGCTGATGGGAGGATaGCATTTCCCAGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLWLMGG*HFPVTG
Trigger: CCCAGTCACTGGGAAATGTCATCCTCCCATCAGCCA...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATCTTCTGGAAATTGGCTaGAATGGCCTCCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNLLEIG*NGLHLE
Trigger: TTCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAG...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATATCTGCAGAATGAGGTaGTGTTTGCCTCCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNICRMR*CLPPSG
Trigger: ACCTGAGGGAGGCAAACACCACCTCATTCTGCAGAT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAACAGACAAATTCAGCTaGAGCAATGCATTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGTDKFS*SNAFLP
Trigger: TGGAAGGAATGCATTGCTGCAGCTGAATTTGTCTGT...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGACCTCACACAAATATGTaGAGTTTGGTGGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGPHTNM*SLVVLS
Trigger: TGAAAGCACCACCAAACTGCACATATTTGTGTGAGG...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCCACAGTGCGGCGCATaGTCACGATGCTGTGGTACC +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIPQCGA*SRCCGT
Trigger: GGTACCACAGCATCGTGACCATGCGCCGCACTGTGG...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAGCAACGTTATTCCCATaGATTCTAAAACCAGGGATC +
Preference number: 4 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGATLFP*ILKPGI
Trigger: GATCCCTGGTTTTAGAATCCATGGGAATAACGTTGC...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTACATTTTCAGCTATCTaGTCCAAGGCTAGGTCATCG +
Preference number: 4 (lower is better)
Translates to: IGLQRPYIFCLESHVQVLTFSAI*SKARSS
Trigger: CGATGACCTAGCCTTGGACCAGATAGCTGAAAATGT...AAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGAAACTGCCACGTGGCTTaGGATAGCCCATGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRNCHVA*DSPCFS
Trigger: TGAGAAACATGGGCTATCTCAAGCCACGTGGCAGTT...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGACAAACAGGGAGTCGATaGTGTCATCGGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRQTGSR*CHRLWF
Trigger: AAACCACAGCCGATGACATCATCGACTCCCTGTTTG...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGATCTGGGAAATTCTCCTaGGGGCAAAGCATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRSGKFS*GQSIAC
Trigger: ACAGGCAATGCTTTGCCCTCAGGAGAATTTCCCAGA...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTACAGAGGACAAGAAGGTaGACCTTTCACCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLQRTRR*TFHLHL
Trigger: CAGATGGAGGTGAAAGGTGCACCTTCTTGTCCTCTG...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGGAAATTGGCTGCAATaGCCTCCACCTGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFGNWLQ*PPPGKA
Trigger: GGCCTTTCCAGGTGGAGGCCATTGCAGCCAATTTCC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGAGGTGGAGATTCCACATaGCTGTGGGAGACAGACAAA +
Preference number: 4 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRGGDST*LWETDK
Trigger: TTTGTCTGTCTCCCACAGCCATGTGGAATCTCCACC...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTACCTCCCTCAGGTCTTTaGCTTGGGGCTATAATAACA +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLPPSGL*LGAIIT
Trigger: TGTTATTATAGCCCCAAGTCAAAGACCTGAGGGAGG...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTAGCACTGGCATTTGTTaGAATGTTACACTATTCTGG +
Preference number: 4 (lower is better)
Translates to: IGLQRPYIFCLESHVQVLSTGIC*NVTLFW
Trigger: CCAGAATAGTGTAACATTCCAACAAATGCCAGTGCT...AAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATATTAGAAACACTAGCTaGTGGGATCATCCTTGCATC +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNIRNTS*WDHPCI
Trigger: GATGCAAGGATGATCCCACCAGCTAGTGTTTCTAAT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCCCTACATCTTCTGCCTaGAGTCGCATGTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFPTSSA*SRMSRY
Trigger: GTACCTGGACATGCGACTCCAGGCAGAAGATGTAGG...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATACATTTCCCAGTGACTaGGTCTGCTTTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNTFPSD*VCFHIH
Trigger: ATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCCATTCATCTGCAGAATaGGGTGGTGTTTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFHSSAE*GGVCLP
Trigger: AGGGAGGCAAACACCACCTCATTCTGCAGATGAATG...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTGAATTGCAAGTTCTCTaGATTAGCACTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: YYWLTETLHLLPGVACPGELQVL*ISTQTS
Trigger: TGAAGTCTGAGTGCTAATTCAGAGAACTTGCAATTC...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATCTGAAGCTTCTGTTCTaGTTGGAATATAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNLKLLF*LEYSRR
Trigger: TCTTCTGCTATATTCCAATCAGAACAGAAGCTTCAG...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGTGCTTCATTTCTCCTaGTTGTGGTTAAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFVLHFS*LWLRRG
Trigger: TCCCCGCCTTAACCACAAGCAGGAGAAATGAAGCAC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GAGGTGAAGTTTCTTGGTGATTTTCCTTCTGACAACAGTCACATGCACAGCAGACACTATTCTGGCACTTaGCAACGTTATTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: EVKFLGDFPSDNSHMHSRHYSGT*QRYSHG
Trigger: TCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTG...TCTGCTGTGCATGTGACTGTTGTCAGAAGGAAAATCACCAAGAAACTTCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTACAGGTACTTAACTTCTaGAAATTGGCTGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLQVLNF*KLAAMA
Trigger: GGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTG...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTACTCAGGTCTTTGACTTaGGGCTATAATAACAGCACC +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLLRSLT*GYNNST
Trigger: GGTGCTGTTATTATAGCCCCAAGTCAAAGACCTGAG...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTCATAGAGGCACAGGATaGAGACCAGCATCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVHRGTG*RPASAG
Trigger: TCCCGCTGATGCTGGTCTTCATCCTGTGCCTCTATG...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAGCAGGATGGTCAGTGTaGTGGCCCCTTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVAGWSV*WPLSCW
Trigger: CCAACATGAAAGGGGCCATCACACTGACCATCCTGC...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTAACAAATCAAAGGCAGTaGGAGGTGAAGTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLTNQRQ*EVKFLG
Trigger: ACCAAGAAACTTCACCTCTCACTGCCTTTGATTTGT...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTGAGATCTTCCTGGTGTaGGATCGAGCCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVEIFLV*DRASRN
Trigger: GTTCCTGCTGGCTCGATCCCACACCAGGAAGATCTC...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGATTCCACATGGCTGTaGGAGACAGACAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFDSTWL*ETDKFS
Trigger: GCTGAATTTGTCTGTCTCCCACAGCCATGTGGAATC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATTTTCTGAAACTGAGGTaGCATCAATACATCAGACTA +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNFLKLR*HQYIRL
Trigger: TAGTCTGATGTATTGATGCCACCTCAGTTTCAGAAA...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATAGGTCCATTTATCATTaGAAACTCGAAGCTCGTTAT +
Preference number: 4 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNRSIYH*KLEARY
Trigger: ATAACGAGCTTCGAGTTTCCAATGATAAATGGACCT...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 72 bp ACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTaGGCAACGTTATTCCCATGGATTCTAAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: TGICWNVTLFWH*ATLFPWILKPG
Trigger: CCCTGGTTTTAGAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTGCTGTGGTACCGCAGTaGGTGGAAGATGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: DWNIAEDLELKMSGIASSAVVPQ*VEDGDV
Trigger: TACATCACCATCTTCCACGCACTGCGGTACCACAGC...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCATTTCTCCTGCTTGTaGTTAAGGCGGGGATGTTAC +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIHFSCL*LRRGCY
Trigger: GTAACATCCCCGCCTTAACCACAAGCAGGAGAAATG...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTACATAGTCCAAAAGCATaGGGAAAATACACACACACA +
Preference number: 4 (lower is better)
Translates to: RSTGICWNVTLFWHLATLHSPKA*GKYTHT
Trigger: TGTGTGTGTGTATTTTCCCCATGCTTTTGGACTATG...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCCATTGCTTACCTCTGTaGTATCACAGAGCATTGCAG +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFHCLPL*YHRALQ
Trigger: CTGCAATGCTCTGTGATACCACAGAGGTAAGCAATG...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAAATCACCTTCAGCTCTaGAGCAGGAACTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVNHLQL*SRNFLG
Trigger: GCCCAGAAAGTTCCTGCTTCAGAGCTGAAGGTGATT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCCTTGAGTACACATCCTaGACATTTTCAGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFLEYTS*TFSAIW
Trigger: CCAGATAGCTGAAAATGTTCAGGATGTGTACTCAAG...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTTCACTTGACTCCAGCTaGCTTGCCTCCTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVSLDSS*LASFAS
Trigger: AGAAGCAAAGGAGGCAAGGCAGCTGGAGTCAAGTGA...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCAGGTTAAGTGGCATTaGTTACCTCTGTGGTATCAC +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIQVKWH*LPLWYH
Trigger: GTGATACCACAGAGGTAAGCAATGCCACTTAACCTG...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAAGGCCACCTCAGAACTaGCTTGTTAGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVRPPQN*LVRCPQ
Trigger: CTGTGGACATCTAACAAGCCAGTTCTGAGGTGGCCT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTAACAGCACCATTGCTTaGTGTCTTGCTTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGINSTIA*CLALVL
Trigger: CAAAACCAAAGCAAGACATCAAGCAATGGTGCTGTT...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCAGATCTTATATAGGCTaGCCAGCATATCAGATATGG +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFRSYIG*PAYQIW
Trigger: CCATATCTGATATGCTGGGCAGCCTATATAAGATCT...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAAGGAAAGCAAGTCTTTaGCTTAGCCCAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVRKASL*LSPKPL
Trigger: CAAGGGCTTTGGGCTAAGGCAAAGACTTGCTTTCCT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTGCCAGTGAGGAGCACTaGCATTTGTTGGAATGTTAC +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVASEEH*HLLECY
Trigger: GTAACATTCCAACAAATGCCAGTGCTCCTCACTGGC...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTGATGTTACTTGGACTTaGCTTCACGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIDVTWT*LHGKLD
Trigger: ATCAAGTTTTCCGTGAAGTCAAGTCCAAGTAACATC...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCAACAATGGAAATTGTaGAAAATATCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGIQQWKL*KISPPA
Trigger: TGCCGGAGGAGATATTTTTCACAATTTCCATTGTTG...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGTTTGGGACTATTTATaGTACAGGTTAAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFVWDYL*YRLSGI
Trigger: AATGCCACTTAACCTGTATCATAAATAGTCCCAAAC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTAGTAACTATGAGCCCTaGAGCTTCTGTTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: DWNIAEDLELKMSGIASSSNYEP*SFCSDW
Trigger: CCAATCAGAACAGAAGCTTCAGGGCTCATAGTTACT...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTATTCAAAACTGCCACGTaGCTTGAGATAGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVFKTAT*LEIAHV
Trigger: AACATGGGCTATCTCAAGCCACGTGGCAGTTTTGAA...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTATTAACTTCTGGAAATTaGCTGCAATGGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVLTSGN*LQWPPP
Trigger: AGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAA...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAAGCATTGCCTGTTCTaGAAGATACCATCCATCCTG +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVKHCLF*KIPSIL
Trigger: CAGGATGGATGGTATCTTCCAGAACAGGCAATGCTT...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 72 bp CTGTTGACAAAGGCAGAATTTTATAGGAAGAGCAGTTaGGGACTATTTATGATACAGGTTAAGTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: LLTKAEFYRKSS*GLFMIQVKWHC
Trigger: GCAATGCCACTTAACCTGTATCATAAATAGTCCCAAACTGCTCTTCCTATAAAATTCTGCCTTTGTCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp GTTGATCTTCCTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTTCCTTGTAGCACTTaGTGGAGATCTAAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: VDLPHTNMCSLVVLSFGILPCST*WRSKLK
Trigger: TTTTAACTTAGATCTCCAGCAAGTGCTACAAGGAAG...AATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAGGAAGATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAATGATACAGGTTAAGTaGCATTGCTTACCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVMIQVK*HCLPLW
Trigger: CCACAGAGGTAAGCAATGCCACTTAACCTGTATCAT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTCATTCTACCAGTACCTaGTGCAGAAGATCATCTTTT +
Preference number: 4 (lower is better)
Translates to: DWNIAEDLELKMSGIASSHSTST*CRRSSF
Trigger: AAAAGATGATCTTCTGCAGCAGGTACTGGTAGAATG...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTACTTCACGGAAAACTTaGTTGATTCTTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVTSRKT*LILQDL
Trigger: AAGATCCTGAAGAATCAATCAAGTTTTCCGTGAAGT...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR TCA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTGAATTACTATCAGCTTaGGTACACATCCTGAACATT +
Preference number: 4 (lower is better)
Translates to: DWNIAEDLELKMSGIASSELLSA*VHILNI
Trigger: AATGTTCAGGATGTGTACTCAAGCTGATAGTAATTC...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTACAAAGTTAAGAGGTTaGCCCTACAATAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVTKLRG*PYNKTV
Trigger: AACAGTCTTATTGTAGGGGCAACCTCTTAACTTTGT...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTACCTTGTAGCACTTGCTaGAGATCTAAGTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVPCSTC*RSKLKS
Trigger: AGATTTTAACTTAGATCTCCAGCAAGTGCTACAAGG...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAATGTTACACTATTCTaGCACTTGGCAACGTTATTC +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVNVTLF*HLATLF
Trigger: GAATAACGTTGCCAAGTGCCAGAATAGTGTAACATT...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTGTGACAATTTTCATCTaGCCTTTATGTATTCCCACA +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVVTIFI*PLCIPT
Trigger: TGTGGGAATACATAAAGGCCAGATGAAAATTGTCAC...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAATATGTGCAGTTTGGTaGTGCTTTCATTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVICAVW*CFHLEF
Trigger: GAATTCCAAATGAAAGCACCACCAAACTGCACATAT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 72 bp GAGCAAAGAAGACTAACAGAGAAGGTCCATTTATCATaGGAAACTCGAAGCTCGTTATTTGACATTTATAGT +
Preference number: 4 (lower is better)
Translates to: EQRRLTEKVHLS*ETRSSLFDIYS
Trigger: ACTATAAATGTCAAATAACGAGCTTCGAGTTTCCAATGATAAATGGACCTTCTCTGTTAGTCTTCTTTGCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
3UTR CAA 72 bp CTCACACAAATATGTGCAGTTTGGTGGTGCTTTCATTaGGAATTCTATATGAAGTTAGAGGTAGAAAAACGT +
Preference number: 4 (lower is better)
Translates to: LTQICAVWWCFH*EFYMKLEVEKR
Trigger: ACGTTTTTCTACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTATTCAGCTGCAGCAATaGATTCCTTCCAATTTATTA +
Preference number: 4 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVIQLQQ*IPSNLL
Trigger: TAATAAATTGGAAGGAATGCATTGCTGCAGCTGAAT...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR GCA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAGAAAATGTCTGGAATTaGAAGTTCTCTGAATTAGCA +
Preference number: 4 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVENVWN*KFSELA
Trigger: TGCTAATTCAGAGAACTTGCAATTCCAGACATTTTC...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS TCA 90 bp AGCATCAGCGGGAACAGCGACGTGAAGGTGATCACTGTGGGCACATaGTGGGAGAAGATCACCATGGTGATGCCAGTCCCCGTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SISGNSDVKVITVGT*WEKITMVMPVPVQN
Trigger: GTTCTGCACGGGGACTGGCATCACCATGGTGATCTTCTCCCATCATGTGCCCACAGTGATCACCTTCACGTCGCTGTTCCCGCTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGACCTGAGGGCAAAGCATaGCCTGTTCTGGAAGATACC +
Preference number: 5 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGPEGKA*PVLEDT
Trigger: GGTATCTTCCAGAACAGGCAATGCTTTGCCCTCAGG...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp ATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTCGCAGTAGGGGTTACTaGGGCAGAATGTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: IGLQRPYIFCLESHVQVLRSRGY*GRMSSR
Trigger: TCTTGATGACATTCTGCCCAAGTAACCCCTACTGCG...AAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATGGGTCAATGACGGCATaGCACATGATCAACATGCCG +
Preference number: 5 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNGSMTA*HMINMP
Trigger: CGGCATGTTGATCATGTGCAATGCCGTCATTGACCC...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATTGGAGATTCTTATTCTaGAACACAGCCAGCAGGACG +
Preference number: 5 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNWRFLF*NTASRT
Trigger: CGTCCTGCTGGCTGTGTTCAAGAATAAGAATCTCCA...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACACTATTCTGGCACTaGGCAACGTTATTCCCATGG +
Preference number: 5 (lower is better)
Translates to: YYWLTETLHLLPGVACPGTLFWH*ATLFPW
Trigger: CCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGT...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAGAGGAGCACTGGCATTaGTTGGAATGTTACACTATT +
Preference number: 5 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGEEHWH*LECYTI
Trigger: AATAGTGTAACATTCCAACAAATGCCAGTGCTCCTC...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGATGTCTTGCTTTGGTTTaGGTTTTCCCCATAGTCCAA +
Preference number: 5 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGCLALV*VFPIVQ
Trigger: TTGGACTATGGGGAAAACCAAAACCAAAGCAAGACA...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGCTGCCTTGCCTCCTTaGCTTCTGAAGTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFAALPP*LLKFLS
Trigger: GGACAGGAACTTCAGAAGCAAAGGAGGCAAGGCAGC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp CGCATGTCCAGGTACTTAACTTCTGGAAATTGGCTGCAATGGCCTCCACCTGGAACAAATATGTGCAGTTaGGTGGTGCTTTCATTTGGA +
Preference number: 5 (lower is better)
Translates to: RMSRYLTSGNWLQWPPPGTNMCS*VVLSFG
Trigger: TCCAAATGAAAGCACCACCAAACTGCACATATTTGT...TCCAGGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAGTACCTGGACATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS CCA 90 bp CAGGGAGTCGATGATGTCATCGGCTGTGGTTTCAAAACTGCCACGTaGCTTGAGATAGCCCATGTTTCTCAATATGATCAGGATATTTTC +
Preference number: 5 (lower is better)
Translates to: QGVDDVIGCGFKTAT*LEIAHVSQYDQDIF
Trigger: GAAAATATCCTGATCATATTGAGAAACATGGGCTATCTCAAGCCACGTGGCAGTTTTGAAACCACAGCCGATGACATCATCGACTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS CCA 90 bp TGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATaGATTCTAAAACCAGGGATCAGCCATTCTACCAGTACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CWNVTLFWHLATLFP*ILKPGISHSTSTCC
Trigger: GCAGCAGGTACTGGTAGAATGGCTGATCCCTGGTTTTAGAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTAGTAACATAGTTCATTaGGCAGGGGAAGGATCAAAC +
Preference number: 5 (lower is better)
Translates to: YYWLTETLHLLPGVACPGSNIVH*AGEGSN
Trigger: GTTTGATCCTTCCCCTGCCAAATGAACTATGTTACT...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp GGGAGGATGACATTTCCCAGTGACTGGGTCTGCTTTCACATTCATCTGCAGAATGACTTCACGGAAAACTaGATTGATTCTTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: GRMTFPSDWVCFHIHLQNDFTEN*IDSSGS
Trigger: AGATCCTGAAGAATCAATCAAGTTTTCCGTGAAGTC...ATTCTGCAGATGAATGTGAAAGCAGACCCAGTCACTGGGAAATGTCATCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGCCTCCCTCAGGTCTTaGACTTGGGGCTATAATAAC +
Preference number: 5 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFASLRS*TWGYNN
Trigger: GTTATTATAGCCCCAAGTCAAAGACCTGAGGGAGGC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTATGCCACTGTCCTCACTaGACTCCAGCTGCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVCHCPH*TPAALP
Trigger: AGGCAAGGCAGCTGGAGTCAAGTGAGGACAGTGGCA...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp ATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTACTTTATAGGAAGAGCAGTTaGGGACTATTTATGATACAG +
Preference number: 5 (lower is better)
Translates to: IGLQRPYIFCLESHVQVLYRKSS*GLFMIQ
Trigger: CTGTATCATAAATAGTCCCAAACTGCTCTTCCTATA...AAGTACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS GCA 90 bp GTTGTTGATGTTTTCATACGAGTTGATAATGTGCTTCATTTCTCCTaGTTGTGGTTAAGGCGGGGATGTTACTTGGACTTGACTTCACGG +
Preference number: 5 (lower is better)
Translates to: VVDVFIRVDNVLHFS*LWLRRGCYLDLTSR
Trigger: CCGTGAAGTCAAGTCCAAGTAACATCCCCGCCTTAACCACAAGCAGGAGAAATGAAGCACATTATCAACTCGTATGAAAACATCAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS-3UTR CAA 90 bp TATTATTGGCTTACAGAGACCCTACATCTTCTGCCTGGAGTCGCATGTCCAGGTAGAATTACTATCAGCTaGAGTACACATCCTGAACAT +
Preference number: 5 (lower is better)
Translates to: YYWLTETLHLLPGVACPGRITIS*STHPEH
Trigger: ATGTTCAGGATGTGTACTCAAGCTGATAGTAATTCT...ACCTGGACATGCGACTCCAGGCAGAAGATGTAGGGTCTCTGTAAGCCAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAGTTGCCACTCTTCCATaGCTGGCATCTTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVVATLP*LASWLM
Trigger: CATCAGCCAAGATGCCAGCAATGGAAGAGTGGCAAC...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTATTGACTCCAGCTGCCTaGCCTCCTTTGCTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVLTPAA*PPLLLK
Trigger: CTTCAGAAGCAAAGGAGGCAAGGCAGCTGGAGTCAA...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTAGCAGAAGACCTAGAATaGAAAATGTCTGGAATTGCA +
Preference number: 5 (lower is better)
Translates to: RSTGICWNVTLFWHLATLAEDLE*KMSGIA
Trigger: TGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGC...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS GCA 90 bp TATCTCCTCCGGCAAAACCACACGAGGACAGTCGGAATTATTTCTTaGTGTGTTGTTGATGTTTTCATACGAGTTGATAATGTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: YLLRQNHTRTVGIIS*CVVDVFIRVDNVLH
Trigger: ATGAAGCACATTATCAACTCGTATGAAAACATCAACAACACAGCAAGAAATAATTCCGACTGTCCTCGTGTGGTTTTGCCGGAGGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTAAGGCGGGGATGTTACTaGGACTTGACTTCACGGAAA +
Preference number: 5 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVRRGCY*DLTSRK
Trigger: TTTCCGTGAAGTCAAGTCCAAGTAACATCCCCGCCT...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp AGGAGCACTGGCATTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTACTTAGCCCAAAGCCCTaGAATTTTTATTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RSTGICWNVTLFWHLATLLSPKP*NFYCCF
Trigger: AAAACAGCAATAAAAATTCAAGGGCTTTGGGCTAAG...TAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAATGCCAGTGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp CACACAAATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTCTTAACTTCTGGAAATaGGCTGCAATGGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: HTNMCSLVVLSFGILYEVLNFWK*AAMAST
Trigger: GGTGGAGGCCATTGCAGCCAATTTCCAGAAGTTAAG...AACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATATTTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp TTTGTTGGAATGTTACACTATTCTGGCACTTGGCAACGTTATTCCCATGGATTCGAGACAGCAAAGCTGTaGACAAAGGCAGAATTTTAT +
Preference number: 5 (lower is better)
Translates to: FVGMLHYSGTWQRYSHGFETAKL*TKAEFY
Trigger: ATAAAATTCTGCCTTTGTCAACAGCTTTGCTGTCTC...GAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAACATTCCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTCAGAAGATCATCTTTTaGAATGCGTCCCTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: DWNIAEDLELKMSGIASSQKIIF*NASLSS
Trigger: AGAGCTCAGGGACGCATTCAAAAAGATGATCTTCTG...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp GATTGGAATATAGCAGAAGACCTAGAATTGAAAATGTCTGGAATTGCAAGTTCTAAGGTCCATTTATCATaGGAAACTCGAAGCTCGTTA +
Preference number: 5 (lower is better)
Translates to: DWNIAEDLELKMSGIASSKVHLS*ETRSSL
Trigger: TAACGAGCTTCGAGTTTCCAATGATAAATGGACCTT...AGAACTTGCAATTCCAGACATTTTCAATTCTAGGTCTTCTGCTATATTCCAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS-3UTR CAA 90 bp ATATGTGCAGTTTGGTGGTGCTTTCATTTGGAATTCTATATGAAGTTAGAGGTATTTCTTGCTGTGTTGTaGATGTTTTCATACGAGTTG +
Preference number: 5 (lower is better)
Translates to: ICAVWWCFHLEFYMKLEVFLAVL*MFSYEL
Trigger: CAACTCGTATGAAAACATCAACAACACAGCAAGAAA...TACCTCTAACTTCATATAGAATTCCAAATGAAAGCACCACCAAACTGCACATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS CAA 72 bp CCATTCTACCAGTACCTGCTGCAGAAGATCATCTTTTaGAATGCGTCCCTGAGCTCTGGGCTCCGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: PFYQYLLQKIIF*NASLSSGLRKA
Trigger: TGCCTTCCGGAGCCCAGAGCTCAGGGACGCATTCAAAAAGATGATCTTCTGCAGCAGGTACTGGTAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS CAA 90 bp AGGGATCAGCCATTCTACCAGTACCTGCTGCAGAAGATCATCTTTTaGAATGCGTCCCTGAGCTCTGGGCTCCGGAAGGCATATATGAAG +
Preference number: 6 (lower is better)
Translates to: RDQPFYQYLLQKIIF*NASLSSGLRKAYMK
Trigger: CTTCATATATGCCTTCCGGAGCCCAGAGCTCAGGGACGCATTCAAAAAGATGATCTTCTGCAGCAGGTACTGGTAGAATGGCTGATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS CCA 72 bp GAAGAGAGACATGTAGCAGGCGCAGTAGGGGTTACTTaGGCAGAATGTCATCAAGAGGACATGAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: EERHVAGAVGVT*AECHQEDMKHK
Trigger: TTTGTGCTTCATGTCCTCTTGATGACATTCTGCCCAAGTAACCCCTACTGCGCCTGCTACATGTCTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS CCA 72 bp GATGATGTCATCGGCTGTGGTTTCAAAACTGCCACGTaGCTTGAGATAGCCCATGTTTCTCAATATGATCAG +
Preference number: 6 (lower is better)
Translates to: DDVIGCGFKTAT*LEIAHVSQYDQ
Trigger: CTGATCATATTGAGAAACATGGGCTATCTCAAGCCACGTGGCAGTTTTGAAACCACAGCCGATGACATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS CCA 72 bp GTTACACTATTCTGGCACTTGGCAACGTTATTCCCATaGATTCTAAAACCAGGGATCAGCCATTCTACCAGT +
Preference number: 6 (lower is better)
Translates to: VTLFWHLATLFP*ILKPGISHSTS
Trigger: ACTGGTAGAATGGCTGATCCCTGGTTTTAGAATCCATGGGAATAACGTTGCCAAGTGCCAGAATAGTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS GCA 72 bp GTTTTCATACGAGTTGATAATGTGCTTCATTTCTCCTaGTTGTGGTTAAGGCGGGGATGTTACTTGGACTTG +
Preference number: 6 (lower is better)
Translates to: VFIRVDNVLHFS*LWLRRGCYLDL
Trigger: CAAGTCCAAGTAACATCCCCGCCTTAACCACAAGCAGGAGAAATGAAGCACATTATCAACTCGTATGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS CAA 90 bp GGCAAAACCACACGAGGACAGTCGGAATTATTTCTTGCTGTGTTGTaGATGTTTTCATACGAGTTGATAATGTGCTTCATTTCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GKTTRGQSELFLAVL*MFSYELIMCFISPA
Trigger: AGCAGGAGAAATGAAGCACATTATCAACTCGTATGAAAACATCAACAACACAGCAAGAAATAATTCCGACTGTCCTCGTGTGGTTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS CAA 90 bp TCCGGCAAAACCACACGAGGACAGTCGGAATTATTTCTTGCTGTGTaGTTGATGTTTTCATACGAGTTGATAATGTGCTTCATTTCTCCT +
Preference number: 6 (lower is better)
Translates to: SGKTTRGQSELFLAV*LMFSYELIMCFISP
Trigger: AGGAGAAATGAAGCACATTATCAACTCGTATGAAAACATCAACAACACAGCAAGAAATAATTCCGACTGTCCTCGTGTGGTTTTGCCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327606.4
ENST00000399821.2
CDS CCA 72 bp GATTCTTCAGGATCTTTTCTTCCTTGTAGCACTTGCTaGAGATCTAAGTTAAAATCTCCCAATCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: DSSGSFLPCSTC*RSKLKSPNHLQ
Trigger: CTGAAGGTGATTGGGAGATTTTAACTTAGATCTCCAGCAAGTGCTACAAGGAAGAAAAGATCCTGAAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327606.4
CDS CCA 72 bp GATTCTTCAGGATCTTTTCTTCCTTGTAGCACTTGCTaGAGATCTAAGTTAAAATCTCCCAATCACCTTGAA +
Preference number: 6 (lower is better)
Translates to: DSSGSFLPCSTC*RSKLKSPNHLE
Trigger: TTCAAGGTGATTGGGAGATTTTAACTTAGATCTCCAGCAAGTGCTACAAGGAAGAAAAGATCCTGAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399821.2