RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBTD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000011258

Ensembl transcript IDs: ENST00000405860.7, ENST00000415868.5, ENST00000586178.6, ENST00000586898.1, ENST00000591270.1, ENST00000593259.1

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGAACAAGAGGTTTTCCGCTGGCTGCACACCAACCAACTGGATaGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAG +
Preference number: 1 (lower is better)
Translates to: GGTRGFPLAAHQPTG*ISEPHILHQKSRPE
Trigger: CTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCTTGTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR CCA 90 bp TCTAGGAGGAACAAGAGGTTTTCCGCTGGCTGCACACCAACCAACTaGATGGATATCAGAACCACATATATTGCACCAGAAGTCCAGACC +
Preference number: 1 (lower is better)
Translates to: SRRNKRFSAGCTPTN*MDIRTTYIAPEVQT
Trigger: GGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCTTGTTCCTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR GCA 90 bp TTTATGCTGAATAGTTCTAGGAGGAACAAGAGGTTTTCCGCTGGCTaGACACCAACCAACTGGATGGATATCAGAACCACATATATTGCA +
Preference number: 1 (lower is better)
Translates to: FMLNSSRRNKRFSAG*TPTNWMDIRTTYIA
Trigger: TGCAATATATGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCTTGTTCCTCCTAGAACTATTCAGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR CCA 90 bp ACTTTCAATTCGATTCTCCTAATACAGAACATCTGTTTTTGGTTGTaGTTATACGAAGCTGTTATTTCACAGATAGAGGGAAATGGCAGA +
Preference number: 1 (lower is better)
Translates to: TFNSILLIQNICFWL*LYEAVISQIEGNGR
Trigger: TCTGCCATTTCCCTCTATCTGTGAAATAACAGCTTCGTATAACCACAACCAAAAACAGATGTTCTGTATTAGGAGAATCGAATTGAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
3UTR-3UTR GCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAGCAGGTCCCCATAGGTaGCTTCCAGACTCAGGACGC +
Preference number: 2 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRAGPHR*LPDSGR
Trigger: GCGTCCTGAGTCTGGAAGGCACCTATGGGGACCTGC...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR GCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATCAAACAAGGAAGATCTaGTCCACCACTTCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHQTRKI*STTSCS
Trigger: GGAGCAGGAAGTGGTGGAGCAGATCTTCCTTGTTTG...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR GCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGAGGTTTTCCGCTGGCTaGACACCAACCAACTGGATG +
Preference number: 2 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLRFSAG*TPTNWM
Trigger: CATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCT...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAGCCCCCTGTACAGCTaGATTGATTATAAATCAGTC +
Preference number: 2 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSPLYS*IDYKSV
Trigger: GACTGATTTATAATCAATCCAGCTGTACAGGGGGCT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
3UTR-3UTR CCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCGGCTGCAGTCTGTATTaGGAACTTCTACTCTCACAT +
Preference number: 2 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDIGCSLY*ELLLSH
Trigger: ATGTGAGAGTAGAAGTTCCCAATACAGACTGCAGCC...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGTGCACACCAACCAACTaGATGGATATCAGAACCACA +
Preference number: 2 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLCTPTN*MDIRTT
Trigger: TGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCA...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR GCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGAATAGAAGGAGAGGTTaGATGGTAACAGAACCAGTC +
Preference number: 2 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLNRRRG*MVTEPV
Trigger: GACTGGTTCTGTTACCATGCAACCTCTCCTTCTATT...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR TCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGATACTCTCACATTTTCTaGGATATCACCCCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRYSHIF*DITPAG
Trigger: ACCTGCTGGGGTGATATCTCAGAAAATGTGAGAGTA...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR GCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATGGTTTGAAAGGATACTaGATACTCTCTGAAACCTTT +
Preference number: 2 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHGLKGY*ILSETF
Trigger: AAAGGTTTCAGAGAGTATGCAGTATCCTTTCAAACC...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGTGTGTAACCTCTGGGTaGAGTAAGTTCAATCATGTT +
Preference number: 2 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPCVTSG*SKFNHV
Trigger: AACATGATTGAACTTACTCCACCCAGAGGTTACACA...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR CAA 90 bp TTCACATTGCCATGGGACACATGGTCTGATTCTGTGATATTGTTGTaGAGTCTTAATGTCTTACCTGGCAACCAATCAGACATAGGTATA +
Preference number: 2 (lower is better)
Translates to: FTLPWDTWSDSVILL*SLNVLPGNQSDIGI
Trigger: TATACCTATGTCTGATTGGTTGCCAGGTAAGACATTAAGACTCAACAACAATATCACAGAATCAGACCATGTGTCCCATGGCAATGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR TCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAGATCTTTTGAATCGATaGCCTATGCTTCGAGACCAA +
Preference number: 2 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRDLLNR*PMLRDQ
Trigger: TTGGTCTCGAAGCATAGGTCATCGATTCAAAAGATC...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR GCA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTCGTGTTCGACACAAATaGCTCTTGTCAACCACTTCT +
Preference number: 2 (lower is better)
Translates to: TFLMVATHIVERFNGSIARVRHK*LLSTTS
Trigger: AGAAGTGGTTGACAAGAGGCATTTGTGTCGAACACG...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGACACCAACCAACTGGATaGATATCAGAACCACATATA +
Preference number: 2 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRHQPTG*ISEPHI
Trigger: TATATGTGGTTCTGATATCCATCCAGTTGGTTGGTG...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR TCA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTATACTGCATACTCTCTaGAACCTTTTGGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: TFLMVATHIVERFNGSIAILHTL*NLLGEI
Trigger: GATTTCTCCCAAAAGGTTTCAGAGAGTATGCAGTAT...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR GCA 72 bp AGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTaGTCCACCACTTCCTGCTCCAGGGCCACTCGTGAG +
Preference number: 3 (lower is better)
Translates to: RSTSGSSQTRKI*STTSCSRATRE
Trigger: CTCACGAGTGGCCCTGGAGCAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR TCA 72 bp ATGGTAACAGAACCAGTCAGATCCGTCTGCTGCTTCTaGGCCATCGATCCCAATCATCAGGAATCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: MVTEPVRSVCCF*AIDPNHQESVS
Trigger: GCTGACGGATTCCTGATGATTGGGATCGATGGCTCAGAAGCAGCAGACGGATCTGACTGGTTCTGTTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR CCA 72 bp AGAGGTTTTCCGCTGGCTGCACACCAACCAACTGGATaGATATCAGAACCACATATATTGCACCAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: RGFPLAAHQPTG*ISEPHILHQKS
Trigger: GGACTTCTGGTGCAATATATGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR TCA 72 bp GACCCTTCCATGACCTTTGTGGTGATGACCCCTCCATaGGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAA +
Preference number: 3 (lower is better)
Translates to: DPSMTFVVMTPP*GVQLHISAAKE
Trigger: TTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACCACAAAGGTCATGGAAGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
3UTR-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCCCTGTACAGCTGGATaGATTATAAATCAGTCCTGT +
Preference number: 3 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSPCTAG*IINQSC
Trigger: ACAGGACTGATTTATAATCAATCCAGCTGTACAGGG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
3UTR CCA 72 bp AACAAGAGGTTTTCCGCTGGCTGCACACCAACCAACTaGATGGATATCAGAACCACATATATTGCACCAGAA +
Preference number: 3 (lower is better)
Translates to: NKRFSAGCTPTN*MDIRTTYIAPE
Trigger: TTCTGGTGCAATATATGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CAA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCCGACACAAATGCCTCTaGTCAACCACTTCTACTCTC +
Preference number: 3 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDIRHKCL*STTSTL
Trigger: GAGAGTAGAAGTGGTTGACAAGAGGCATTTGTGTCG...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CAA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAAAGGCTGCAGTCTGTATaGGGAACTTCTACTCTCACA +
Preference number: 3 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQRLQSV*GTSTLT
Trigger: TGTGAGAGTAGAAGTTCCCAATACAGACTGCAGCCT...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR GCA 72 bp ACCACTTCTACTCTCATGCAAGGTTTGAAAGGATACTaGATACTCTCTGAAACCTTTTGGGAGAAATCAGGA +
Preference number: 3 (lower is better)
Translates to: TTSTLMQGLKGY*ILSETFWEKSG
Trigger: TCCTGATTTCTCCCAAAAGGTTTCAGAGAGTATGCAGTATCCTTTCAAACCTTGCATGAGAGTAGAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CAA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTTCAGGAGGCAGTGTTTaGGCACCAGTAAGTCGTTTC +
Preference number: 3 (lower is better)
Translates to: TFLMVATHIVERFNGSIASGGSV*APVSRF
Trigger: GAAACGACTTACTGGTGCCAAAACACTGCCTCCTGA...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CAA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAAGACATAGGTATATTCTaGTCCTGTGAGCTCATAAGA +
Preference number: 3 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQDIGIF*SCELIR
Trigger: TCTTATGAGCTCACAGGACAAGAATATACCTATGTC...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR-3UTR CAA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAACTCTCATGCAAGGTTaGAAAGGATACTGCATACTC +
Preference number: 3 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRTLMQG*KGYCIL
Trigger: GAGTATGCAGTATCCTTTCAAACCTTGCATGAGAGT...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR TCA 72 bp GAGTTACTGTGGCTACACATATTAAACGTGGCTCCATaGGATCTACTGCTTCTAATTTCATTCCTACACGAA +
Preference number: 3 (lower is better)
Translates to: ELLWLHILNVAP*DLLLLISFLHE
Trigger: TTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATGTGTAGCCACAGTAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
3UTR CCA 72 bp TCGATTCTCCTAATACAGAACATCTGTTTTTGGTTGTaGTTATACGAAGCTGTTATTTCACAGATAGAGGGA +
Preference number: 3 (lower is better)
Translates to: SILLIQNICFWL*LYEAVISQIEG
Trigger: TCCCTCTATCTGTGAAATAACAGCTTCGTATAACCACAACCAAAAACAGATGTTCTGTATTAGGAGAATCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGGCAGGTCCCCATAGGTaGCTTCCAGACTCAGGACGC +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLAGPHR*LPDSGR
Trigger: GCGTCCTGAGTCTGGAAGGCACCTATGGGGACCTGC...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGGTAGGGGTTGTCCGTaGTCCCCGAGCCCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSGRGCP*SPSPRR
Trigger: GCGCCGCGGGCTCGGGGAGCACGGACAACCCCTACC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR GCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGCGGAGCTGGAGCTGCTaGTTGTGTCCTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLRSWSC*LCPHCS
Trigger: GCTGCAGTGAGGACACAAGCAGCAGCTCCAGCTCCG...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGCCTCTCCCCGGGACTaGGGCGACTACAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSASPRD*GDYRGP
Trigger: GGGCCCCCTGTAGTCGCCGCAGTCCCGGGGAGAGGC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR TCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGATGGTCTCGATCTCCTaGCCTTGTGATCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLMVSIS*PCDLPA
Trigger: GGCTGGCAGATCACAAGGTCAGGAGATCGAGACCAT...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATGGTAGGGGTTGTCCGTaGTCCCCGAGCCCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHGRGCP*SPSPRR
Trigger: GCGCCGCGGGCTCGGGGAGCACGGACAACCCCTACC...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCAGACCGGTGGCGGGTaGAGCAGCCCCCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSQTGGG*SSPRIS
Trigger: GGAAATCCGGGGGCTGCTGCACCCGCCACCGGTCTG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR CCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGCACTCTCTTCGGAGCTaGAGCTGCTGCTTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLHSLRS*SCCLCP
Trigger: AGGACACAAGCAGCAGCTCCAGCTCCGAAGAGAGTG...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGGTGAACACCACGTGGTaGCCCACTTTTCTTATGTCC +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLVNTTW*PTFLMS
Trigger: GGACATAAGAAAAGTGGGTCACCACGTGGTGTTCAC...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGAGGGGACGGCTGCTTTaGATGACCTCTAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLRGRLL*MTSNVS
Trigger: AGAGACATTAGAGGTCATCCAAAGCAGCCGTCCCCT...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCGGAGCTGGAGCTGCTaGTTGTGTCCTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRSWSC*LCPHCS
Trigger: GCTGCAGTGAGGACACAAGCAGCAGCTCCAGCTCCG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTTCGGAGCTGGAGCTaGTGCTTGTGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLRSWS*CLCPHC
Trigger: GCAGTGAGGACACAAGCAGCAGCTCCAGCTCCGAAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGAATGGGCTGTGCATATaGCACCAGAAGTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLNGLCI*HQKSSV
Trigger: AACAGATGACTTCTGGTGCCATATGCACAGCCCATT...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTCCATCAGGGCCTCATaGGTAGGGGTTGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSIRAS*VGVVRA
Trigger: AGCACGGACAACCCCTACCCATGAGGCCCTGATGGA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR TCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGCTCTCATGCAAGGTTTaGAAGGATACTGCATACTCT +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLLSCKV*KDTAYS
Trigger: AGAGTATGCAGTATCCTTTCAAACCTTGCATGAGAG...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACTTGTCAGAGAGGCTaGAGAGGGGACGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTCQRG*RGDGCF
Trigger: AAAGCAGCCGTCCCCTCTGCAGCCTCTCTGACAAGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCACTCTCTTCGGAGCTaGAGCTGCTGCTTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSHSLRS*SCCLCP
Trigger: AGGACACAAGCAGCAGCTCCAGCTCCGAAGAGAGTG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTCCGTCTGCTGCTTCTaGGCCATCGATCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSVCCF*AIDPNH
Trigger: ATGATTGGGATCGATGGCTCAGAAGCAGCAGACGGA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGACGGCTGCTTTGGATaGCCTCTAATGTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSDGCFG*PLMSLP
Trigger: CGGAAGAGACATTAGAGGTCATCCAAAGCAGCCGTC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR TCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGTTTCCTTTCAGATCGTaGAGAATGTTCAGTCACTTG +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLFPFRS*RMFSHL
Trigger: CAAGTGACTGAACATTCTTCACGATCTGAAAGGAAA...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCCTTGCCTCAGCCTCCTaGGTAGCTGGGACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDILASAS*VAGTSG
Trigger: GCCTGAAGTCCCAGCTACTCAGGAGGCTGAGGCAAG...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAGGTTTTCCGCTGGCTaGACACCAACCAACTGGATG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRFSAG*TPTNWM
Trigger: CATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCAAGAGGTTTTCCGCTaGCTGCACACCAACCAACTG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSQEVFR*LHTNQL
Trigger: CAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCTTG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGTTGGAGGCTTACCCTaGAGTCTGGCCAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSVGGLP*SLAKML
Trigger: AAGCATTTTGGCCAGACTTCAGGGTAAGCCTCCAAC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGGGTTTGAAAGGATACTaGATACTCTCTGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLGLKGY*ILSETF
Trigger: AAAGGTTTCAGAGAGTATGCAGTATCCTTTCAAACC...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATCCTGACCTTGTGATCTaGCAGCCTCGGCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHPDLVI*QPRPPK
Trigger: TTTAGGAGGCCGAGGCTGGCAGATCACAAGGTCAGG...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGTCCATCAGGGCCTCATaGGTAGGGGTTGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPSIRAS*VGVVRA
Trigger: AGCACGGACAACCCCTACCCATGAGGCCCTGATGGA...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAGGGGACGGCTGCTTTaGATGACCTCTAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRGRLL*MTSNVS
Trigger: AGAGACATTAGAGGTCATCCAAAGCAGCCGTCCCCT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR TCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATGACGGCTGCTTTGGATaGCCTCTAATGTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHDGCFG*PLMSLP
Trigger: CGGAAGAGACATTAGAGGTCATCCAAAGCAGCCGTC...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTCTCCAGGGCCACTCGTaGGGGCTATCTGGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: TFLMVATHIVERFNGSIALQGHS*GLSGSD
Trigger: GTCGCTCCCAGATAGCCCTCACGAGTGGCCCTGGAG...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTCATGGCTCTTGTTTaGTGTAGAAGTTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLMALV*CRSWQS
Trigger: GCTCTGCCAACTTCTACATCAAACAAGAGCCATGAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGTGATGACCCCTCCATaGGGAGTTCAGTTGCATATT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSVMTPP*GVQLHI
Trigger: AATATGCAACTGAACTCCTCATGGAGGGGTCATCAC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGAAATGGCAGAGAACTaGTCAGAATCCCTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSEMAEN*SESLSW
Trigger: CCACGAAAGGGATTCTGATCAGTTCTCTGCCATTTC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTCAATATTACCACTCTaGAGAGGCCAGGCTAAGACC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSILPL*RGQAKT
Trigger: GGTCTTAGCCTGGCCTCTTCAGAGTGGTAATATTGA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGCTCGGCCTCCTAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPLGLLK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTAGGAGGCCGAG...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGCCAGATTTACCATCTaGGTATGTGTAGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSARFTI*VCVDLP
Trigger: GGGCAAGTCTACACATACCCAGATGGTAAATCTGGC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGCTTACCCTGAAGTCTaGCCAAAATGCTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSAYPEV*PKCLPS
Trigger: AGAAGGCAAGCATTTTGGCCAGACTTCAGGGTAAGC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGCTCGTGAGGGCTATCTaGGAGCGACTCTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPLVRAI*ERLSFH
Trigger: ATGGAAGGAGAGTCGCTCCCAGATAGCCCTCACGAG...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCCAACCTTCAACTGTTaGTCACGGGATCAAGACAAG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSPTFNC*SRDQDK
Trigger: CTTGTCTTGATCCCGTGACCAACAGTTGAAGGTTGG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTACTCTCACATTTTCTaGGATATCACCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSYSHIF*DITPAG
Trigger: ACCTGCTGGGGTGATATCTCAGAAAATGTGAGAGTA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCGAGACCAACCAATATaGTGTATTAATGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRDQPI*CINGLC
Trigger: GCACAGCCCATTAATACATCATATTGGTTGGTCTCG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTCACAGTCTACCCACTaGTCATACTCTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSQSTH*SYSSSH
Trigger: ATGGGAAGAAGAGTATGATCAGTGGGTAGACTGTGA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGTGGAATGTAGTGGCGTaGTCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPWNVVA*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACGCCACTACATTCCA...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCGTGTTCGACACAAATaGCTCTTGTCAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRVRHK*LLSTTS
Trigger: AGAAGTGGTTGACAAGAGGCATTTGTGTCGAACACG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGCTTGTGTCCTCACTaGAGCTATCATAACCGTCAA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCLCPH*SYHNRQ
Trigger: TTGACGGTTATGATAGCTGCAGTGAGGACACAAGCA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTCTTCGGAGCTGGAGCTaGTGCTTGTGTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCLRSWS*CLCPHC
Trigger: GCAGTGAGGACACAAGCAGCAGCTCCAGCTCCGAAG...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGAAGTCTGGCCAAAATaGTTGCCTTCTTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSEVWPK*LPSWSL
Trigger: CAAACTCCAAGAAGGCAAGCATTTTGGCCAGACTTC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACCTTCCATGGAGACTaGTGCTTTTGTCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTFHGD*CFCLCL
Trigger: CAAGCAAAGACAAAAGCAGCAGTCTCCATGGAAGGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGCAGGTCCCCATAGGTaGATGTTTAAAACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSAGPHR*MFKTGN
Trigger: GTTACCTGTTTTAAACATGCACCTATGGGGACCTGC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGGCTGCAGTCTGTATTaGGAACTTCTACTCTCACAT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSGCSLY*ELLLSH
Trigger: ATGTGAGAGTAGAAGTTCCCAATACAGACTGCAGCC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGCAAGAGGTTTTCCGCTaGCTGCACACCAACCAACTG +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLQEVFR*LHTNQL
Trigger: CAGTTGGTTGGTGTGCAGCCAGCGGAAAACCTCTTG...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTCTCTGAAACCTTTTaGGAGAAATCAGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLSETF*EKSGGS
Trigger: ACTGCCTCCTGATTTCTCCCAAAAGGTTTCAGAGAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAATGGGCTGTGCATATaGCACCAGAAGTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSNGLCI*HQKSSV
Trigger: AACAGATGACTTCTGGTGCCATATGCACAGCCCATT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAAATCCTCTCTCTCCTaGTTTAGTCAGTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSKSSLS*FSQFPM
Trigger: CATGGGGAACTGACTAAACCAGGAGAGAGAGGATTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGATCTTTTGAATCGATaGCCTATGCTTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSDLLNR*PMLRDQ
Trigger: TTGGTCTCGAAGCATAGGTCATCGATTCAAAAGATC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGGTTGGAGGCTTACCCTaGAGTCTGGCCAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLVGGLP*SLAKML
Trigger: AAGCATTTTGGCCAGACTTCAGGGTAAGCCTCCAAC...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAAGCATTCCATAGGCTaGAGGACTGTAGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSKHSIG*RTVEVN
Trigger: ATTAACCTCTACAGTCCTTCAGCCTATGGAATGCTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGTATTAATGGGCTGTaGATATGGCACCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCINGL*IWHQKS
Trigger: TGACTTCTGGTGCCATATGCACAGCCCATTAATACA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAATAGAAGGAGAGGTTaGATGGTAACAGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSNRRRG*MVTEPV
Trigger: GACTGGTTCTGTTACCATGCAACCTCTCCTTCTATT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATGCCAGATTTACCATCTaGGTATGTGTAGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHARFTI*VCVDLP
Trigger: GGGCAAGTCTACACATACCCAGATGGTAAATCTGGC...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTAAATCCAAGGTACTaGCAGAGTACACTACACAAC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLNPRY*QSTLHN
Trigger: GTTGTGTAGTGTACTCTGCCAGTACCTTGGATTTAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCATACTGCATACTCTCTaGAACCTTTTGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSILHTL*NLLGEI
Trigger: GATTTCTCCCAAAAGGTTTCAGAGAGTATGCAGTAT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTTCCGTCTGCTGCTTCTaGGCCATCGATCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCSVCCF*AIDPNH
Trigger: ATGATTGGGATCGATGGCTCAGAAGCAGCAGACGGA...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCCTACACGAAATCCGTaGTTTGGAACATCCTTATTA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSPTRNP*FGTSLL
Trigger: TAATAAGGATGTTCCAAATCACGGATTTCGTGTAGG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTAAACGTGGCTCCATaGGATCTACTGCTTCTAATT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLNVAP*DLLLLI
Trigger: AATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATTCACAGTCTACCCACTaGTCATACTCTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHSQSTH*SYSSSH
Trigger: ATGGGAAGAAGAGTATGATCAGTGGGTAGACTGTGA...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTTCCTTTCAGATCGTaGAGAATGTTCAGTCACTTG +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSFPFRS*RMFSHL
Trigger: CAAGTGACTGAACATTCTTCACGATCTGAAAGGAAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR TCA 90 bp GATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACATAGGTATATTCTTGTCCGTGAACACCACGTGGTaGCCCACTTTTCTTATGTCC +
Preference number: 4 (lower is better)
Translates to: DWFSLDAGNQSDIGIFLSVNTTW*PTFLMS
Trigger: GGACATAAGAAAAGTGGGTCACCACGTGGTGTTCAC...GGACAAGAATATACCTATGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR TCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGTAGACTGAGATCCTaGATATCTTGTCAACCATTC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCRLRS*ISCQPF
Trigger: GAATGGTTGACAAGATATTCAGGATCTCAGTCTACA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTCCATGGAGACTGCTaGTTTTGTCTTTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSFHGDC*FCLCLI
Trigger: AATCAAGCAAAGACAAAAGCAGCAGTCTCCATGGAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR GCA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATACCTTCCATGGAGACTaGTGCTTTTGTCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHTFHGD*CFCLCL
Trigger: CAAGCAAAGACAAAAGCAGCAGTCTCCATGGAAGGT...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACAGGTAACCGGAGCTaGTATAAAGCTATTGCTATT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTGNRS*YKAIAI
Trigger: AATAGCAATAGCTTTATAGCAGCTCCGGTTACCTGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCACCAACCAACTGGATaGATATCAGAACCACATATA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSHQPTG*ISEPHI
Trigger: TATATGTGGTTCTGATATCCATCCAGTTGGTTGGTG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAACCATTCCCCACTCTaGTCTACTTCTTTTACCTTA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSNHSPL*STSFTL
Trigger: TAAGGTAAAAGAAGTAGACCAGAGTGGGGAATGGTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGTGTAACCTCTGGGTaGAGTAAGTTCAATCATGTT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCVTSG*SKFNHV
Trigger: AACATGATTGAACTTACTCCACCCAGAGGTTACACA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAAATGCTTGCCTTCTTaGAGTTTGACGAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSKCLPS*SLTSNF
Trigger: GAAGTTACTCGTCAAACTCCAAGAAGGCAAGCATTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTTTGCTTTCTTTGTTaGAGGCTTACCCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSFCFLC*RLTLKS
Trigger: AGACTTCAGGGTAAGCCTCCAACAAAGAAAGCAAAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGTCCTTTGTATTGCTaGGACTTAGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCPLYC*DLAFFF
Trigger: GAAGAAAAAGGCTAAGTCCCAGCAATACAAAGGACA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCCTAAAATGGTCTCCTaGGGCTTTCCATTAACATTT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSPKMVS*GFPLTF
Trigger: AAATGTTAATGGAAAGCCCCAGGAGACCATTTTAGG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAAAACACTCAGAGCCTaGGTTTGCTATAGAATTGGA +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSKTLRA*VCYRIG
Trigger: TCCAATTCTATAGCAAACCCAGGCTCTGAGTGTTTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR TCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGTACTCTCACATTTTCTaGGATATCACCCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLYSHIF*DITPAG
Trigger: ACCTGCTGGGGTGATATCTCAGAAAATGTGAGAGTA...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCCGAGACCAACCAATATaGTGTATTAATGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDIRDQPI*CINGLC
Trigger: GCACAGCCCATTAATACATCATATTGGTTGGTCTCG...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTACTTGTCAGAGAGGCTaGAGAGGGGACGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TFLMVATHIVERFNGSIATCQRG*RGDGCF
Trigger: AAAGCAGCCGTCCCCTCTGCAGCCTCTCTGACAAGT...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGTGCTTGTGTCCTCACTaGAGCTATCATAACCGTCAA +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPCLCPH*SYHNRQ
Trigger: TTGACGGTTATGATAGCTGCAGTGAGGACACAAGCA...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCGAAGTCTGGCCAAAATaGTTGCCTTCTTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDIEVWPK*LPSWSL
Trigger: CAAACTCCAAGAAGGCAAGCATTTTGGCCAGACTTC...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGCTATTGGATTCACATTaGCATGGGACACATGGTCTG +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPLLDSH*HGTHGL
Trigger: CAGACCATGTGTCCCATGGCAATGTGAATCCAATAG...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTATGTCCTTTGTATTaGTGGGACTTAGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLCPLY*WDLAFF
Trigger: GAAAAAGGCTAAGTCCCAGCAATACAAAGGACATAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCCTCTCTGAAACCTTTTaGGAGAAATCAGGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDILSETF*EKSGGS
Trigger: ACTGCCTCCTGATTTCTCCCAAAAGGTTTCAGAGAG...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCAGAACATCTGTTTTTaGTTGTGGTTATACGAAGCT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSQNICF*LWLYEA
Trigger: AGCTTCGTATAACCACAACCAAAAACAGATGTTCTG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
3UTR CAA 72 bp CCATGGGACACATGGTCTGATTCTGTGATATTGTTGTaGAGTCTTAATGTCTTACCTGGCAACCAATCAGAC +
Preference number: 4 (lower is better)
Translates to: PWDTWSDSVILL*SLNVLPGNQSD
Trigger: GTCTGATTGGTTGCCAGGTAAGACATTAAGACTCAACAACAATATCACAGAATCAGACCATGTGTCCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGGATCTTTTGAATCGATaGCCTATGCTTCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPDLLNR*PMLRDQ
Trigger: TTGGTCTCGAAGCATAGGTCATCGATTCAAAAGATC...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACATAGGTATATTCTTGTCCTCACAGTCTACCCACTaGTCATACTCTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: DWFSLDAGNQSDIGIFLSSQSTH*SYSSSH
Trigger: ATGGGAAGAAGAGTATGATCAGTGGGTAGACTGTGA...GGACAAGAATATACCTATGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR TCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGATTAGAAAATGTATGTaGACACCACGTGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLIRKCM*TPRGDP
Trigger: TGGGTCACCACGTGGTGTTCACATACATTTTCTAAT...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTAGGTTTTCCGCTGGCTaGACACCAACCAACTGGATG +
Preference number: 4 (lower is better)
Translates to: TFLMVATHIVERFNGSIARFSAG*TPTNWM
Trigger: CATCCAGTTGGTTGGTGTGCAGCCAGCGGAAAACCT...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAACGTGTTCGACACAAATaGCTCTTGTCAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQRVRHK*LLSTTS
Trigger: AGAAGTGGTTGACAAGAGGCATTTGTGTCGAACACG...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCTGTATTAATGGGCTGTaGATATGGCACCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDICINGL*IWHQKS
Trigger: TGACTTCTGGTGCCATATGCACAGCCCATTAATACA...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAATGCACACCAACCAACTaGATGGATATCAGAACCACA +
Preference number: 4 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQCTPTN*MDIRTT
Trigger: TGTGGTTCTGATATCCATCCAGTTGGTTGGTGTGCA...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAGCTTACCCTGAAGTCTaGCCAAAATGCTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRAYPEV*PKCLPS
Trigger: AGAAGGCAAGCATTTTGGCCAGACTTCAGGGTAAGC...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTTGATGAAGCTGATTaGTTTTCTCTTGATGACTGT +
Preference number: 4 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSFDEAD*FSLDDC
Trigger: ACAGTCATCAAGAGAAAACCAATCAGCTTCATCAAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
3UTR CAA 72 bp TTGCCATGGGACACATGGTCTGATTCTGTGATATTGTaGTTGAGTCTTAATGTCTTACCTGGCAACCAATCA +
Preference number: 4 (lower is better)
Translates to: LPWDTWSDSVIL*LSLNVLPGNQS
Trigger: TGATTGGTTGCCAGGTAAGACATTAAGACTCAACAACAATATCACAGAATCAGACCATGTGTCCCATGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGCCTACACGAAATCCGTaGTTTGGAACATCCTTATTA +
Preference number: 4 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPPTRNP*FGTSLL
Trigger: TAATAAGGATGTTCCAAATCACGGATTTCGTGTAGG...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp TTTTCTCTTGATGCTGGCAACCAATCAGACATAGGTATATTCTTGTCCTGTGAGCCTCTGGAGAATTGCTaGTTTTTACAAAAGGACACC +
Preference number: 4 (lower is better)
Translates to: FSLDAGNQSDIGIFLSCEPLENC*FLQKDT
Trigger: GGTGTCCTTTTGTAAAAATCAGCAATTCTCCAGAGG...CTCACAGGACAAGAATATACCTATGTCTGATTGGTTGCCAGCATCAAGAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR TCA 90 bp TCTGTTTTGATGAAGCTGATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACAATTAGAAAATGTATGTaGACACCACGTGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: SVLMKLIGFLLMLATNQTIRKCM*TPRGDP
Trigger: TGGGTCACCACGTGGTGTTCACATACATTTTCTAAT...TGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATCAGCTTCATCAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR CCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTGGCTGCAGTCTGTATTaGGAACTTCTACTCTCACAT +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCGCSLY*ELLLSH
Trigger: ATGTGAGAGTAGAAGTTCCCAATACAGACTGCAGCC...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGTGTGTAACCTCTGGGTaGAGTAAGTTCAATCATGTT +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLCVTSG*SKFNHV
Trigger: AACATGATTGAACTTACTCCACCCAGAGGTTACACA...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGTTTTGCTTTCTTTGTTaGAGGCTTACCCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLFCFLC*RLTLKS
Trigger: AGACTTCAGGGTAAGCCTCCAACAAAGAAAGCAAAA...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGTGTCCTTTGTATTGCTaGGACTTAGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLCPLYC*DLAFFF
Trigger: GAAGAAAAAGGCTAAGTCCCAGCAATACAAAGGACA...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAAATACTGCATACTCTCTaGAACCTTTTGGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQILHTL*NLLGEI
Trigger: GATTTCTCCCAAAAGGTTTCAGAGAGTATGCAGTAT...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp TTTTCTCTTGATGCTGGCAACCAATCAGACATAGGTATATTCTTGTCCTGTGAGTTAAACGTGGCTCCATaGGATCTACTGCTTCTAATT +
Preference number: 4 (lower is better)
Translates to: FSLDAGNQSDIGIFLSCELNVAP*DLLLLI
Trigger: AATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAA...CTCACAGGACAAGAATATACCTATGTCTGATTGGTTGCCAGCATCAAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR TCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGACCTCTGGAGAATTGCTaGTTTTTACAAAAGGACACC +
Preference number: 4 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRPLENC*FLQKDT
Trigger: GGTGTCCTTTTGTAAAAATCAGCAATTCTCCAGAGG...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCACCATAGCCTCAACATaGGACATTTTCCACTATTTA +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDITIAST*DIFHYL
Trigger: TAAATAGTGGAAAATGTCTCATGTTGAGGCTATGGT...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATAGAAGGAGAGGTTaGATGGTAACAGAACCAGTC +
Preference number: 4 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRNRRRG*MVTEPV
Trigger: GACTGGTTCTGTTACCATGCAACCTCTCCTTCTATT...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAAACAGGTAACCGGAGCTaGTATAAAGCTATTGCTATT +
Preference number: 4 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQTGNRS*YKAIAI
Trigger: AATAGCAATAGCTTTATAGCAGCTCCGGTTACCTGT...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCATTATTGCAAGGGTTTaGCTTTTATGGCATACTGCA +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDIIIARV*LLWHTA
Trigger: TGCAGTATGCCATAAAAGGCAAACCCTTGCAATAAT...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCTGTGAGATAGTCCTCTaGAGAATTGCTGATTTTTAC +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDICEIVL*RIADFY
Trigger: GTAAAAATCAGCAATTCTCCAGAGGACTATCTCACA...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTTTGCCATGGGACACATaGTCTGATTCTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCLPWDT*SDSVIL
Trigger: CAATATCACAGAATCAGACCATGTGTCCCATGGCAA...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR TCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTTTAAACGTGGCTCCATaGGATCTACTGCTTCTAATT +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCLNVAP*DLLLLI
Trigger: AATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAA...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586898.1
CDS-3UTR GCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGATTCCATGGAGACTGCTaGTTTTGTCTTTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRFHGDC*FCLCLI
Trigger: AATCAAGCAAAGACAAAAGCAGCAGTCTCCATGGAA...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR GCA 90 bp TCTGTTTTGATGAAGCTGATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACATTATGTCCTTTGTATTaGTGGGACTTAGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVLMKLIGFLLMLATNQTLCPLY*WDLAFF
Trigger: GAAAAAGGCTAAGTCCCAGCAATACAAAGGACATAA...TGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATCAGCTTCATCAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR GCA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCCCTTTTATGGCATACTaGACCTTTAAGCATAATACA +
Preference number: 4 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDIPFMAY*TFKHNT
Trigger: TGTATTATGCTTAAAGGTGCAGTATGCCATAAAAGG...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTAACCATTCCCCACTCTaGTCTACTTCTTTTACCTTA +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCNHSPL*STSFTL
Trigger: TAAGGTAAAAGAAGTAGACCAGAGTGGGGAATGGTT...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp TCTGTTTTGATGAAGCTGATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACATGTGAGATAGTCCTCTaGAGAATTGCTGATTTTTAC +
Preference number: 4 (lower is better)
Translates to: SVLMKLIGFLLMLATNQTCEIVL*RIADFY
Trigger: GTAAAAATCAGCAATTCTCCAGAGGACTATCTCACA...TGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATCAGCTTCATCAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR CCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTTGTCCTTTGTATTGCTaGGACTTAGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCCPLYC*DLAFFF
Trigger: GAAGAAAAAGGCTAAGTCCCAGCAATACAAAGGACA...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586898.1
CDS-3UTR GCA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGATTATGTCCTTTGTATTaGTGGGACTTAGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRLCPLY*WDLAFF
Trigger: GAAAAAGGCTAAGTCCCAGCAATACAAAGGACATAA...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTAAATGCTTGCCTTCTTaGAGTTTGACGAGTAACTTC +
Preference number: 4 (lower is better)
Translates to: TFLMVATHIVERFNGSIAKCLPS*SLTSNF
Trigger: GAAGTTACTCGTCAAACTCCAAGAAGGCAAGCATTT...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CCA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTTATGTAATTGACTATTaGATTCACATTGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCYVIDY*IHIAMG
Trigger: TCCCATGGCAATGTGAATCCAATAGTCAATTACATA...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS GCA 90 bp ACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTaGTCCAGGGCCACTCGTGAGGGCTATCTGGGAGCGACTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TSGSSQTRKICSTTS*SRATREGYLGATLL
Trigger: AAGGAGAGTCGCTCCCAGATAGCCCTCACGAGTGGCCCTGGAGCAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGTCCGACTCAGATCCTTaGTGTTTTCCATCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLSDSDP*CFPSGP
Trigger: AGGCCCTGATGGAAAACACAAAGGATCTGAGTCGGA...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS TCA 90 bp AACAAGGAAGATCTGCTCCACCACTTCCTGCTCCAGGGCCACTCGTaGGGGCTATCTGGGAGCGACTCTCCTTCCATGTTTAAAACAGGT +
Preference number: 5 (lower is better)
Translates to: NKEDLLHHFLLQGHS*GLSGSDSPSMFKTG
Trigger: ACCTGTTTTAAACATGGAAGGAGAGTCGCTCCCAGATAGCCCTCACGAGTGGCCCTGGAGCAGGAAGTGGTGGAGCAGATCTTCCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGCTTTTGCTTTCTTTGTaGGAGGCTTACCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLLLLSL*EAYPEV
Trigger: GACTTCAGGGTAAGCCTCCAACAAAGAAAGCAAAAG...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAGCTGGAGCTGCTGCTaGTGTCCTCACTGCAGCTAT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSWSCC*CPHCSY
Trigger: ATAGCTGCAGTGAGGACACAAGCAGCAGCTCCAGCT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS TCA 90 bp TCAGTCACTTGTCAGAGAGGCTGCAGAGGGGACGGCTGCTTTGGATaGCCTCTAATGTCTCTTCCGACTCAGATCCTTTGTGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SVTCQRGCRGDGCFG*PLMSLPTQILCVFH
Trigger: ATGGAAAACACAAAGGATCTGAGTCGGAAGAGACATTAGAGGTCATCCAAAGCAGCCGTCCCCTCTGCAGCCTCTCTGACAAGTGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586178.6
CDS-3UTR CAA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGTTGACGAGTAACTTCTaGAACATGAAACGCTACAGA +
Preference number: 5 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLLTSNF*NMKRYR
Trigger: TCTGTAGCGTTTCATGTTCAAGAAGTTACTCGTCAA...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGTGTCTTTGCTTGATTTaGCAAGGTAGCTTGATACTG +
Preference number: 5 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLCLCLI*QGSLIL
Trigger: CAGTATCAAGCTACCTTGCAAAATCAAGCAAAGACA...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS CCA 90 bp ATGTTCAGTCACTTGTCAGAGAGGCTGCAGAGGGGACGGCTGCTTTaGATGACCTCTAATGTCTCTTCCGACTCAGATCCTTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: MFSHLSERLQRGRLL*MTSNVSSDSDPLCF
Trigger: AAAACACAAAGGATCTGAGTCGGAAGAGACATTAGAGGTCATCCAAAGCAGCCGTCCCCTCTGCAGCCTCTCTGACAAGTGACTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTCCGACTCAGATCCTTaGTGTTTTCCATCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSDSDP*CFPSGP
Trigger: AGGCCCTGATGGAAAACACAAAGGATCTGAGTCGGA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAGAATGTTCAGTCACTaGTCAGAGAGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRMFSH*SERLQR
Trigger: CCTCTGCAGCCTCTCTGACAAGTGACTGAACATTCT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586178.6
CDS-3UTR CAA 90 bp GAGGTCCACCTCAGGCTCCTCCCAAACAAGGAAGATCTGCTCCACCACTTCCTGTGGGTATGTGTAGACTaGCCCATTGTTTTTGATAAT +
Preference number: 5 (lower is better)
Translates to: EVHLRLLPNKEDLLHHFLWVCVD*PIVFDN
Trigger: ATTATCAAAAACAATGGGCAAGTCTACACATACCCA...CAGGAAGTGGTGGAGCAGATCTTCCTTGTTTGGGAGGAGCCTGAGGTGGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGTCTGGCCAAAATGCTaGCCTTCTTGGAGTTTGACG +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSVWPKC*PSWSLT
Trigger: CGTCAAACTCCAAGAAGGCAAGCATTTTGGCCAGAC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGCCACCTCATGGCTCTaGTTTGATGTAGAAGTTGGC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSATSWL*FDVEVG
Trigger: GCCAACTTCTACATCAAACAAGAGCCATGAGGTGGC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAGGCTGCAGTCTGTATaGGGAACTTCTACTCTCACA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRLQSV*GTSTLT
Trigger: TGTGAGAGTAGAAGTTCCCAATACAGACTGCAGCCT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCGACACAAATGCCTCTaGTCAACCACTTCTACTCTC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSRHKCL*STTSTL
Trigger: GAGAGTAGAAGTGGTTGACAAGAGGCATTTGTGTCG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGTGTAGTGGCGTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPCSGVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCACGCCACTACA...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACCAACCTTCAACTGTaGGTCACGGGATCAAGACAA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTNLQL*VTGSRQ
Trigger: TTGTCTTGATCCCGTGACCAACAGTTGAAGGTTGGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTCAGAACCACATATATaGCACCAGAAGTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSSEPHI*HQKSRP
Trigger: TGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTTTTGCTTTCTTTGTaGGAGGCTTACCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLLLSL*EAYPEV
Trigger: GACTTCAGGGTAAGCCTCCAACAAAGAAAGCAAAAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCATTTTGCAAGGTAGCTaGATACTGAGCATATGCGGC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSILQGS*ILSICG
Trigger: GCCGCATATGCTCAGTATCAAGCTACCTTGCAAAAT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp CACCTTTTCTGTATACCAACTTACACTGTGATGCTGGAGGCTGTAGTTGATATCTCAGGAGGCAGTGTTTaGGCACCAGTAAGTCGTTTC +
Preference number: 5 (lower is better)
Translates to: HLFCIPTYTVMLEAVVDISGGSV*APVSRF
Trigger: GAAACGACTTACTGGTGCCAAAACACTGCCTCCTGA...GATATCAACTACAGCCTCCAGCATCACAGTGTAAGTTGGTATACAGAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACTCTCATGCAAGGTTaGAAAGGATACTGCATACTC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTLMQG*KGYCIL
Trigger: GAGTATGCAGTATCCTTTCAAACCTTGCATGAGAGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAGCTGGAGCTGCTGCTaGTGTCCTCACTGCAGCTAT +
Preference number: 5 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRSWSCC*CPHCSY
Trigger: ATAGCTGCAGTGAGGACACAAGCAGCAGCTCCAGCT...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGGTCTGGCCAAAATGCTaGCCTTCTTGGAGTTTGACG +
Preference number: 5 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPVWPKC*PSWSLT
Trigger: CGTCAAACTCCAAGAAGGCAAGCATTTTGGCCAGAC...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGAACTTTTGCTTTCTTaGTTGGAGGCTTACCCTGAA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSELLLS*LEAYPE
Trigger: TTCAGGGTAAGCCTCCAACAAAGAAAGCAAAAGTTC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp ATGGGCTGTGCATATGGCACCAGAAGTCATCTGTTCTATCTTCGCTTTCTTCATCGCCCGGCAGATTTTTaGTATTTTTGGTGGAGACAG +
Preference number: 5 (lower is better)
Translates to: MGCAYGTRSHLFYLRFLHRPADF*YFWWRQ
Trigger: CTGTCTCCACCAAAAATACAAAAAATCTGCCGGGCG...ATGAAGAAAGCGAAGATAGAACAGATGACTTCTGGTGCCATATGCACAGCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCCTTCAGCTGCAGTGTaGTCATTTTCTTATGTCCTT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSPSAAV*SFSYVL
Trigger: AAGGACATAAGAAAATGACAACACTGCAGCTGAAGG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTGATCAGACGCTCCTaGAAGGAAATTATAATCCTC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLIRRS*KEIIIL
Trigger: GAGGATTATAATTTCCTTCAAGGAGCGTCTGATCAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAAAGAATGTTCAGTCACTaGTCAGAGAGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQRMFSH*SERLQR
Trigger: CCTCTGCAGCCTCTCTGACAAGTGACTGAACATTCT...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTTGACGAGTAACTTCTaGAACATGAAACGCTACAGA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLTSNF*NMKRYR
Trigger: TCTGTAGCGTTTCATGTTCAAGAAGTTACTCGTCAA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCGTTTCTGAAGAACTTTaGCTTTCTTTGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSVSEEL*LSLLEA
Trigger: AGCCTCCAACAAAGAAAGCAAAAGTTCTTCAGAAAC...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGTCTTTGCTTGATTTaGCAAGGTAGCTTGATACTG +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCLCLI*QGSLIL
Trigger: CAGTATCAAGCTACCTTGCAAAATCAAGCAAAGACA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGCTTTTGTCTTTGCTaGATTTTGCAAGGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSCFCLC*ILQGSL
Trigger: CAAGCTACCTTGCAAAATCAAGCAAAGACAAAAGCA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCCTTATGTCCTTTGTATaGCTGGGACTTAGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSLMSFV*LGLSLF
Trigger: AAAAAGGCTAAGTCCCAGCAATACAAAGGACATAAG...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCATTTTCTTATGTCCTTaGTATTGCTGGGACTTAGCC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSIFLCP*YCWDLA
Trigger: GGCTAAGTCCCAGCAATACAAAGGACATAAGAAAAT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACAGAACATCTGTTTTaGGTTGTGGTTATACGAAGC +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTEHLF*VVVIRS
Trigger: GCTTCGTATAACCACAACCAAAAACAGATGTTCTGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAAAGAGGGCTTTAGGTaGTGTTCAGACTGTAGAAAA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSKEGFR*CSDCRK
Trigger: TTTTCTACAGTCTGAACACAACCTAAAGCCCTCTTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGTCAGAACCACATATATaGCACCAGAAGTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLSEPHI*HQKSRP
Trigger: TGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGA...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCACTTGCCCATTGTTTTaGATAATCGGGAGATTAGAA +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSTCPLF*IIGRLE
Trigger: TTCTAATCTCCCGATTATCAAAAACAATGGGCAAGT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCTGGGTATGTGTAGACTaGCCCATTGTTTTTGATAAT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSWVCVD*PIVFDN
Trigger: ATTATCAAAAACAATGGGCAAGTCTACACATACCCA...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp GGTGATGACCCCTCCATGAGGAGTTCAGTTGCATATTTCTGCAGCAAAAGAAGCAACATCTGTTTTTGGTaGTGGTTATACGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: GDDPSMRSSVAYFCSKRSNICFW*WLYEAV
Trigger: AACAGCTTCGTATAACCACAACCAAAAACAGATGTT...GCTTCTTTTGCTGCAGAAATATGCAACTGAACTCCTCATGGAGGGGTCATCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415868.5
ENST00000586178.6
CDS-3UTR CAA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTAGGCTGCAGTCTGTATaGGGAACTTCTACTCTCACA +
Preference number: 5 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCRLQSV*GTSTLT
Trigger: TGTGAGAGTAGAAGTTCCCAATACAGACTGCAGCCT...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTCGACACAAATGCCTCTaGTCAACCACTTCTACTCTC +
Preference number: 5 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCRHKCL*STTSTL
Trigger: GAGAGTAGAAGTGGTTGACAAGAGGCATTTGTGTCG...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGGAACTTTTGCTTTCTTaGTTGGAGGCTTACCCTGAA +
Preference number: 5 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLELLLS*LEAYPE
Trigger: TTCAGGGTAAGCCTCCAACAAAGAAAGCAAAAGTTC...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGAACATCCTTATTAAATAGTTTTACTGGTGCTGCAATGGAGCCAGTTTCCCTGCATTATTGCAAGGGTTaGCCTTTTATGGCATACTGC +
Preference number: 5 (lower is better)
Translates to: GTSLLNSFTGAAMEPVSLHYCKG*PFMAYC
Trigger: GCAGTATGCCATAAAAGGCAAACCCTTGCAATAATG...CAGGGAAACTGGCTCCATTGCAGCACCAGTAAAACTATTTAATAAGGATGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp TCTGTTTTGATGAAGCTGATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACACTGATTGGTTTTCTCTaGATGCTGGCAACCAATCAG +
Preference number: 5 (lower is better)
Translates to: SVLMKLIGFLLMLATNQTLIGFL*MLATNQ
Trigger: CTGATTGGTTGCCAGCATCAAGAGAAAACCAATCAG...TGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATCAGCTTCATCAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR CAA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGGACATAGGTATATTCTaGTCCTGTGAGCTCATAAGA +
Preference number: 5 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPDIGIF*SCELIR
Trigger: TCTTATGAGCTCACAGGACAAGAATATACCTATGTC...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAATTTTGCAAGGTAGCTaGATACTGAGCATATGCGGC +
Preference number: 5 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRILQGS*ILSICG
Trigger: GCCGCATATGCTCAGTATCAAGCTACCTTGCAAAAT...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAACTTTTCTTATGTCCTTaGTATTGCTGGGACTTAGCC +
Preference number: 5 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQLFLCP*YCWDLA
Trigger: GGCTAAGTCCCAGCAATACAAAGGACATAAGAAAAG...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp TCTGTTTTGATGAAGCTGATTGGTTTTCTCTTGATGCTGGCAACCAATCAGACAGACATAGGTATATTCTaGTCCTGTGAGCTCATAAGA +
Preference number: 5 (lower is better)
Translates to: SVLMKLIGFLLMLATNQTDIGIF*SCELIR
Trigger: TCTTATGAGCTCACAGGACAAGAATATACCTATGTC...TGTCTGATTGGTTGCCAGCATCAAGAGAAAACCAATCAGCTTCATCAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586898.1
CDS-3UTR CAA 90 bp AAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGAAATCCGACTTGCCCATTGTTTTaGATAATCGGGAGATTAGAA +
Preference number: 5 (lower is better)
Translates to: KRGSMRSTASNFIPTRNPTCPLF*IIGRLE
Trigger: TTCTAATCTCCCGATTATCAAAAACAATGGGCAAGT...CGGATTTCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp GGATATCAGAACCACATATATTGCACCAGAAGTCCAGACCAGAGTCATTTTCAATGCTTTTGTCTTTGCTaGATTTTGCAAGGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: GYQNHIYCTRSPDQSHFQCFCLC*ILQGSL
Trigger: CAAGCTACCTTGCAAAATCAAGCAAAGACAAAAGCA...TTGAAAATGACTCTGGTCTGGACTTCTGGTGCAATATATGTGGTTCTGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTCTTTTCTTATGTCCTTaGTATTGCTGGGACTTAGCC +
Preference number: 5 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCLFLCP*YCWDLA
Trigger: GGCTAAGTCCCAGCAATACAAAGGACATAAGAAAAG...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586898.1
CDS CCA 90 bp TTTTTAGTTCCACTAGTTACATTTCAAGTGCTCAACAACCACATGTaGCTAGTGGCTACCGTAACTGGACAGCAAAGATATAGGAAATTT +
Preference number: 5 (lower is better)
Translates to: FLVPLVTFQVLNNHM*LVATVTGQQRYRKF
Trigger: AAATTTCCTATATCTTTGCTGTCCAGTTACGGTAGCCACTAGCCACATGTGGTTGTTGAGCACTTGAAATGTAACTAGTGGAACTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593259.1
CDS-3UTR CAA 90 bp CATATTAAACGTGGCTCCATGAGATCTACTGCTTCTAATTTCATTCCTACACGACTTATGTCCTTTGTATaGCTGGGACTTAGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: HIKRGSMRSTASNFIPTRLMSFV*LGLSLF
Trigger: AAAAAGGCTAAGTCCCAGCAATACAAAGGACATAAG...TCGTGTAGGAATGAAATTAGAAGCAGTAGATCTCATGGAGCCACGTTTAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS-3UTR CAA 90 bp TTAGAAAATGTATGTGAACACCACGTGGTGACCCACTTTTCTTATGTCCTTTGTCTTATGTCCTTTGTATaGCTGGGACTTAGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: LENVCEHHVVTHFSYVLCLMSFV*LGLSLF
Trigger: AAAAAGGCTAAGTCCCAGCAATACAAAGGACATAAG...ACAAAGGACATAAGAAAAGTGGGTCACCACGTGGTGTTCACATACATTTTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586898.1
CDS-3UTR CAA 90 bp ACCTTTCTAATGGTTGCGACACATATTGTAGAAAGATTTAATGGGTCTATAGCTGTTTCTGAAGAACTTTaGCTTTCTTTGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TFLMVATHIVERFNGSIAVSEEL*LSLLEA
Trigger: AGCCTCCAACAAAGAAAGCAAAAGTTCTTCAGAAAC...AGCTATAGACCCATTAAATCTTTCTACAATATGTGTCGCAACCATTAGAAAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405860.7
CDS CCA 72 bp CACTTGTCAGAGAGGCTGCAGAGGGGACGGCTGCTTTaGATGACCTCTAATGTCTCTTCCGACTCAGATCCT +
Preference number: 6 (lower is better)
Translates to: HLSERLQRGRLL*MTSNVSSDSDP
Trigger: AGGATCTGAGTCGGAAGAGACATTAGAGGTCATCCAAAGCAGCCGTCCCCTCTGCAGCCTCTCTGACAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586178.6
CDS TCA 72 bp TGTCAGAGAGGCTGCAGAGGGGACGGCTGCTTTGGATaGCCTCTAATGTCTCTTCCGACTCAGATCCTTTGT +
Preference number: 6 (lower is better)
Translates to: CQRGCRGDGCFG*PLMSLPTQILC
Trigger: ACAAAGGATCTGAGTCGGAAGAGACATTAGAGGTCATCCAAAGCAGCCGTCCCCTCTGCAGCCTCTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405860.7
ENST00000586178.6
CDS CCA 72 bp CCACTAGTTACATTTCAAGTGCTCAACAACCACATGTaGCTAGTGGCTACCGTAACTGGACAGCAAAGATAT +
Preference number: 6 (lower is better)
Translates to: PLVTFQVLNNHM*LVATVTGQQRY
Trigger: ATATCTTTGCTGTCCAGTTACGGTAGCCACTAGCCACATGTGGTTGTTGAGCACTTGAAATGTAACTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593259.1
CDS CAA 72 bp AGCCATGCCAGATTTACCATCTGGGTATGTGTAGACTaGCCCATTGTTTTTGATAATCGGGAGATTAGAAGG +
Preference number: 6 (lower is better)
Translates to: SHARFTIWVCVD*PIVFDNREIRR
Trigger: CCTTCTAATCTCCCGATTATCAAAAACAATGGGCAAGTCTACACATACCCAGATGGTAAATCTGGCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405860.7
ENST00000415868.5
ENST00000586178.6
ENST00000591270.1
CDS CCA 72 bp ACACATCTCACAGGTAGCCATGCCAGATTTACCATCTaGGTATGTGTAGACTTGCCCATTGTTTTTGATAAT +
Preference number: 6 (lower is better)
Translates to: THLTGSHARFTI*VCVDLPIVFDN
Trigger: ATTATCAAAAACAATGGGCAAGTCTACACATACCCAGATGGTAAATCTGGCATGGCTACCTGTGAGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405860.7
ENST00000415868.5
ENST00000586178.6
ENST00000591270.1
CDS GCA 72 bp CTTAGAAAACAGTGTTCTATGTGTGTATGTCCAGTATaGCAGACATTTGGCTACTTAAATTTACATTGCCTA +
Preference number: 6 (lower is better)
Translates to: LRKQCSMCVCPV*QTFGYLNLHCL
Trigger: TAGGCAATGTAAATTTAAGTAGCCAAATGTCTGGCATACTGGACATACACACATAGAACACTGTTTTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593259.1
CDS CCA 72 bp GTGTTCTATGTGTGTATGTCCAGTATGCCAGACATTTaGCTACTTAAATTTACATTGCCTAAAACAGCAAAA +
Preference number: 6 (lower is better)
Translates to: VFYVCMSSMPDI*LLKFTLPKTAK
Trigger: TTTTGCTGTTTTAGGCAATGTAAATTTAAGTAGCCAAATGTCTGGCATACTGGACATACACACATAGAACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593259.1