RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBOAT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000143797

Ensembl transcript IDs: ENST00000305997.8, ENST00000460786.1, ENST00000462696.1, ENST00000471753.5, ENST00000474341.5, ENST00000477073.5, ENST00000486315.1, ENST00000486484.5, ENST00000494760.1

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGTCGCGGCTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTaGTTCTTCATTCCTGCCTTCCTTCGTCACCTCTCTCTTTTAAGA +
Preference number: 1 (lower is better)
Translates to: QSRGCAPCIPPEATQ*FFIPAFLRHLSLLR
Trigger: TCTTAAAAGAGAGAGGTGACGAAGGAAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAGCCGCGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 90 bp GTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTaGCCCTACGGACAAGTGCTGAGGTTGGGAGTGCCCACTGAAATA +
Preference number: 1 (lower is better)
Translates to: VPWDTQHTFSNRARV*PYGQVLRLGVPTEI
Trigger: TATTTCAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR TCA 90 bp ACGCGTGTGACCCTACGGACAAGTGCTGAGGTTGGGAGTGCCCACTaGAATATGGAAATATTCTTACATAAGGCGTGGCCCACGGAGACA +
Preference number: 1 (lower is better)
Translates to: TRVTLRTSAEVGSAH*NMEIFLHKAWPTET
Trigger: TGTCTCCGTGGGCCACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGGGTCACACGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR GCA 90 bp CTCTCTATCATCCAGATTGACACGATTATTTTTCCACCTCTTCAGTaGCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGT +
Preference number: 1 (lower is better)
Translates to: LSIIQIDTIIFPPLQ*LGIRNIHSATGHAC
Trigger: ACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAAAATAATCGTGTCAATCTGGATGATAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CCA 90 bp AGGGCTTTGAGCTCAAGTAGTAAGTCAATGACCATGACAATAGTGTaGACTGTGAATGTGCCCAAGTCCTTGAATCCTACAGACCTTGCT +
Preference number: 1 (lower is better)
Translates to: RALSSSSKSMTMTIV*TVNVPKSLNPTDLA
Trigger: AGCAAGGTCTGTAGGATTCAAGGACTTGGGCACATTCACAGTCCACACTATTGTCATGGTCATTGACTTACTACTTGAGCTCAAAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR GCA 90 bp GCCTTCAATGAAAGTAATGTAGTCTTTGTAAGAGCAAAGTGGGCCTaGCAGGATCCCCATGAAGTTACAGTTGTAACTCAAATACTCCAG +
Preference number: 1 (lower is better)
Translates to: AFNESNVVFVRAKWA*QDPHEVTVVTQILQ
Trigger: CTGGAGTATTTGAGTTACAACTGTAACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAAGACTACATTACTTTCATTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR CCA 90 bp GGGTCTGGCAGCCAAAAGAGAGATATACAGATAGATAATCTTTGTTaGCCACGAAGCTGTAGCTTGAAAATGCTCATCAATGTTGTACTC +
Preference number: 1 (lower is better)
Translates to: GSGSQKRDIQIDNLC*PRSCSLKMLINVVL
Trigger: GAGTACAACATTGATGAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATCTATCTGTATATCTCTCTTTTGGCTGCCAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR CCA 90 bp TCTCAAAAGTGGTATGTTTGGAAATCCTGTGTGTGTCACACATGGTaGAGACCAATAAATATATTTTTGAAGCAAATGGGCAGTAGTGGC +
Preference number: 1 (lower is better)
Translates to: SQKWYVWKSCVCHTW*RPINIFLKQMGSSG
Trigger: GCCACTACTGCCCATTTGCTTCAAAAATATATTTATTGGTCTCCACCATGTGTGACACACACAGGATTTCCAAACATACCACTTTTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CCA 90 bp GAAAATGCTCATCAATGTTGTACTCCACAGGTAATGTTGTACAGATaGTCAAGTGAAATAACAAGGACAGCCCACAAACTAAGAGCTTCT +
Preference number: 1 (lower is better)
Translates to: ENAHQCCTPQVMLYR*SSEITRTAHKLRAS
Trigger: AGAAGCTCTTAGTTTGTGGGCTGTCCTTGTTATTTCACTTGACCATCTGTACAACATTACCTGTGGAGTACAACATTGATGAGCATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR TCA 90 bp CTGTGTCTCTTCTTTTCCATTTTCACCAGATTGTGTGATATGGTATaGTCTGCCTTCAATGAAAGTAATGTAGTCTTTGTAAGAGCAAAG +
Preference number: 1 (lower is better)
Translates to: LCLFFSIFTRLCDMV*SAFNESNVVFVRAK
Trigger: CTTTGCTCTTACAAAGACTACATTACTTTCATTGAAGGCAGATCATACCATATCACACAATCTGGTGAAAATGGAAAAGAAGAGACACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGAACAGGGCACGCGTGTaGCCCTACGGACAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: WPTETWHGRACFTPFPIWNRARV*PYGQVL
Trigger: CAGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTT...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR TCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGCCTACGGACAAGTGCTaGGGTTGGGAGTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: LFSALGYATYIQQQGTRVPTDKC*GWECPL
Trigger: CAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGG...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CCA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAACACGGAGACATGGCATaGGAGGGCTTGTTTCACTCC +
Preference number: 2 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQHGDMA*EGLFHS
Trigger: GGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTG...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR TCA 90 bp AACAGCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTCCTACGGACAAGTGCTaGGGTTGGGAGTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: NSPQSLPDHCFSDECLEAPTDKC*GWECPL
Trigger: CAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGG...AGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR GCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTTTTCCACCTCTTCAGTaGCTTGGGATACGCAACATA +
Preference number: 2 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLFPPLQ*LGIRNI
Trigger: TATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAA...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR CCA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATTCTTACATAAGGCGTaGCCCACGGAGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQFLHKA*PTETWH
Trigger: ATGCCATGTCTCCGTGGGCCACGCCTTATGTAAGAA...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR CAA 90 bp CGTTCACGACACCCAACTGGTCCTGAACTCTTAGGATTAACCCGTTaGCTTATGGCTGAGGAACTTGGGGTCTACAGGACAGGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RSRHPTGPELLGLTR*LMAEELGVYRTGGS
Trigger: GGAGCCACCTGTCCTGTAGACCCCAAGTTCCTCAGCCATAAGCAAACGGGTTAATCCTAAGAGTTCAGGACCAGTTGGGTGTCGTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR CCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACACGGAGACATGGCATaGGAGGGCTTGTTTCACTCC +
Preference number: 2 (lower is better)
Translates to: TETWHGRACFTPFPIWCTHGDMA*EGLFHS
Trigger: GGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CCA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCACCTCTTCAGTGCCTTaGGATACGCAACATACATTC +
Preference number: 2 (lower is better)
Translates to: AWPTETWHGRACFTPFPITSSVP*DTQHTF
Trigger: GAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGT...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATACCTCTTCAGTGCCTTaGGATACGCAACATACATTC +
Preference number: 2 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNTSSVP*DTQHTF
Trigger: GAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGT...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR GCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAACGCGGCTGTGCCCCGTaGATTCCACCGGAGGCCACG +
Preference number: 2 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQRGCAP*IPPEAT
Trigger: CGTGGCCTCCGGTGGAATGCACGGGGCACAGCCGCG...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR GCA 90 bp ACAGCCCACAAACTAAGAGCTTCTGAACAACCGCAGTATTTGGAGATGGCTCTGAGAGCAAAGTGGGCCTaGCAGGATCCCCATGAAGTT +
Preference number: 2 (lower is better)
Translates to: TAHKLRASEQPQYLEMALRAKWA*QDPHEV
Trigger: AACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCT...CAGAGCCATCTCCAAATACTGCGGTTGTTCAGAAGCTCTTAGTTTGTGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR GCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGCACAACATCAACTACTaGAGTAGCGTTCTCACAATA +
Preference number: 2 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLHNINY*SSVLTI
Trigger: TATTGTGAGAACGCTACTGCAGTAGTTGATGTTGTG...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CAA 90 bp CTATCATCCAGATTGACACGATTATTTTTCCACCTCTTCAGTGCCTaGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGACC +
Preference number: 2 (lower is better)
Translates to: LSSRLTRLFFHLFSA*GYATYIQQQGTRVT
Trigger: GGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAAAATAATCGTGTCAATCTGGATGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CAA 90 bp TCAATGACCATGACAATAGTGTGGACTGTGAATGTGCCCAAGTCCTaGAATCCTACAGACCTTGCTAATGGCTCCGTTCACGACACCCAA +
Preference number: 2 (lower is better)
Translates to: SMTMTIVWTVNVPKS*NPTDLANGSVHDTQ
Trigger: TTGGGTGTCGTGAACGGAGCCATTAGCAAGGTCTGTAGGATTCAAGGACTTGGGCACATTCACAGTCCACACTATTGTCATGGTCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGCTCTATCATCCAGATTaGCACGATTATTTTTCCACC +
Preference number: 2 (lower is better)
Translates to: LFSALGYATYIQQQGTRVLYHPD*HDYFST
Trigger: GGTGGAAAAATAATCGTGTCAATCTGGATGATAGAG...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTTGGATTGTGAGAGCTaGATGTTTTCATGTGTATTC +
Preference number: 2 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGLDCES*MFSCVF
Trigger: GAATACACATGAAAACATTCAGCTCTCACAATCCAA...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR GCA 90 bp GCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTATTTTTTCCACCTCTTCAGTaGCTTGGGATACGCAACATA +
Preference number: 2 (lower is better)
Translates to: ALRAFPITALVMNVSRLFFPPLQ*LGIRNI
Trigger: TATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAA...AAATAGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR GCA 90 bp GTAAATACTAAATTCTGGCTGCTGGAGTTGGGTCTCTCCTCATGTTTGGGCGACTGGGATCGCAGGAGATaGTTAGTAATCCAAGGCAAG +
Preference number: 2 (lower is better)
Translates to: VNTKFWLLELGLSSCLGDWDRRR*LVIQGK
Trigger: CTTGCCTTGGATTACTAAGCATCTCCTGCGATCCCA...GTCGCCCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR GCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAAGCCTTCCCGATCACTaGTTTAGTGATGAATGTCTC +
Preference number: 2 (lower is better)
Translates to: TETWHGRACFTPFPIWCTSLPDH*FSDECL
Trigger: GAGACATTCATCACTAAAGCAGTGATCGGGAAGGCT...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR CCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTACTCCATTTCCAATCTaGTGTACAGGAAATTCCTTA +
Preference number: 2 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGTPFPI*CTGNSL
Trigger: TAAGGAATTTCCTGTACACCAGATTGGAAATGGAGT...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CCA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAAAGAAAGAAGCACAAATaGCACAACTGTGTAACTTAT +
Preference number: 2 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQRKKHK*HNCVTY
Trigger: ATAAGTTACACAGTTGTGCCATTTGTGCTTCTTTCT...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR TCA 90 bp AACAGCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTGTTGGGAGTGCCCACTaGAATATGGAAATATTCTTA +
Preference number: 2 (lower is better)
Translates to: NSPQSLPDHCFSDECLEAVGSAH*NMEIFL
Trigger: TAAGAATATTTCCATATTTCAGTGGGCACTCCCAAC...AGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTGCTGTAAAACGTGAGTaGTGGTTTTATAGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAAVKRE*WFYRKK
Trigger: CTTCTTTCTATAAAACCATCACTCACGTTTTACAGC...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR CCA 90 bp AGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTATTTCTTGATTTCTTACATAAGGCGTaGCCCACGGAGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: RAFPITALVMNVSRLFLDFLHKA*PTETWH
Trigger: ATGCCATGTCTCCGTGGGCCACGCCTTATGTAAGAA...ATCAAGAAATAGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
3UTR-3UTR TCA 90 bp GTAAGAGCAAAGTGGGCCTGCCAGGATCCCCATGAAGTTACAGTTGTAACTCAACGAAACATCCCATCATaGATTTCGCAAGCCAAACTA +
Preference number: 2 (lower is better)
Translates to: VRAKWACQDPHEVTVVTQRNIPS*ISQAKL
Trigger: TAGTTTGGCTTGCGAAATTCATGATGGGATGTTTCG...TTGAGTTACAACTGTAACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR GCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAACCGGAGGCCACGCAGTaGTTCTTCATTCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQPEATQ*FFIPAF
Trigger: GAAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGG...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR CCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAATGGCCCACGGAGACATaGCATGGGAGGGCTTGTTTC +
Preference number: 2 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQWPTET*HGRACF
Trigger: GAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR CCA 90 bp GCGTCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATTTTGTAAGAGCAAAGTaGGCCTGCCAGGATCCCCAT +
Preference number: 2 (lower is better)
Translates to: ASMQNSIWVWQPKERYTDFVRAK*ACQDPH
Trigger: ATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAA...ATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR TCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAAAGGCAGAACCAGAATaGAGATCCAGGTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIKAEPE*RSRSPP
Trigger: AGGAGGAGACCTGGATCTTCATTCTGGTTCTGCCTT...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTACACCCAACTGGTCCTaGACTCTTAGGATTAACCCG +
Preference number: 2 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVTPNWS*TLRINP
Trigger: CGGGTTAATCCTAAGAGTTCAGGACCAGTTGGGTGT...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp AAGCTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCAAAACTAGTGATCTTCTaGGTAATGATCATCATTGGG +
Preference number: 2 (lower is better)
Translates to: KLGMRLTAKSLCEEVSSSKLVIF*VMIIIG
Trigger: CCCAATGATGATCATTACTCAGAAGATCACTAGTTT...TGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR CCA 90 bp GTAAATACTAAATTCTGGCTGCTGGAGTTGGGTCTCTCCTCATGTTTGGGCGACACTCCATTTCCAATCTaGTGTACAGGAAATTCCTTA +
Preference number: 2 (lower is better)
Translates to: VNTKFWLLELGLSSCLGDTPFPI*CTGNSL
Trigger: TAAGGAATTTCCTGTACACCAGATTGGAAATGGAGT...GTCGCCCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR CCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCTTTTGCTTCAGCATTaGGAGCACGCGTTCATCAAG +
Preference number: 2 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVLLLQH*EHAFIK
Trigger: CTTGATGAACGCGTGCTCCCAATGCTGAAGCAAAAG...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp TCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATAGAGTACAGATGGTCAAGTaGAATAACAAGGACAGCCCA +
Preference number: 2 (lower is better)
Translates to: SMQNSIWVWQPKERYTDRVQMVK*NNKDSP
Trigger: TGGGCTGTCCTTGTTATTTCACTTGACCATCTGTAC...TCTATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR CCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATATTAAGAGATTCCTTCTaGAAGCGCTCTTTGACTGCA +
Preference number: 2 (lower is better)
Translates to: STTSHSLNAHWVKCSSFILRDSF*KRSLTA
Trigger: TGCAGTCAAAGAGCGCTTCCAGAAGGAATCTCTTAA...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAGTTGGGAGTGCCCACTaGAATATGGAAATATTCTTA +
Preference number: 2 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIVGSAH*NMEIFL
Trigger: TAAGAATATTTCCATATTTCAGTGGGCACTCCCAAC...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp TGTGTCTCTTCTTTTCCATTTTCACCAGATTGTGTGATATGGTATGATCTGCCTGATCATCATTGGGCCTaGAAAATCAGCAGAATATTG +
Preference number: 2 (lower is better)
Translates to: CVSSFPFSPDCVIWYDLPDHHWA*KISRIL
Trigger: CAATATTCTGCTGATTTTTCAGGCCCAATGATGATC...AGGCAGATCATACCATATCACACAATCTGGTGAAAATGGAAAAGAAGAGACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR CCA 90 bp TCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATAGACCAGATTGTGTGATATaGTATGATCTGCCTTCAATG +
Preference number: 2 (lower is better)
Translates to: SMQNSIWVWQPKERYTDRPDCVI*YDLPSM
Trigger: CATTGAAGGCAGATCATACCATATCACACAATCTGG...TCTATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR GCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCATAAGCCAGATGGTTaGCTTGTCTTTAACTTCATT +
Preference number: 2 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVHKPDG*LVFNFI
Trigger: AATGAAGTTAAAGACAAGGCAACCATCTGGCTTATG...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR-3UTR TCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAACTAAGGTTTACAGGCTaGGAAATAAATTCAGGTAAC +
Preference number: 2 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQLRFTG*EINSGN
Trigger: GTTACCTGAATTTATTTCTCAGCCTGTAAACCTTAG...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR GCA 72 bp GGCTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTaGTTCTTCATTCCTGCCTTCCTTCGTCACCTCTCT +
Preference number: 3 (lower is better)
Translates to: GCAPCIPPEATQ*FFIPAFLRHLS
Trigger: AGAGAGGTGACGAAGGAAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp GATACGCAACATACATTCAGCAACAGGGCACGCGTGTaGCCCTACGGACAAGTGCTGAGGTTGGGAGTGCCC +
Preference number: 3 (lower is better)
Translates to: DTQHTFSNRARV*PYGQVLRLGVP
Trigger: GGGCACTCCCAACCTCAGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CAA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAAATGGCATGGGAGGGCTaGTTTCACTCCATTTCCAAT +
Preference number: 3 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQMAWEG*FHSISN
Trigger: ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCAT...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CAA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCACCTCTTCAGTGCCTaGGGATACGCAACATACATT +
Preference number: 3 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNHLFSA*GYATYI
Trigger: AATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTG...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR TCA 72 bp GCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTaGGGTTGGGAGTGCCCACTGAAATATGGAAATATT +
Preference number: 3 (lower is better)
Translates to: ATGHACDPTDKC*GWECPLKYGNI
Trigger: AATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CAA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTTCAGCTACCTATAATTaGGCGTCCATTACTGTTTAC +
Preference number: 3 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLSATYN*ASITVY
Trigger: GTAAACAGTAATGGACGCCAAATTATAGGTAGCTGA...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp ACCCTACGGACAAGTGCTGAGGTTGGGAGTGCCCACTaGAATATGGAAATATTCTTACATAAGGCGTGGCCC +
Preference number: 3 (lower is better)
Translates to: TLRTSAEVGSAH*NMEIFLHKAWP
Trigger: GGGCCACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CAA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAATGGCATGGGAGGGCTaGTTTCACTCCATTTCCAAT +
Preference number: 3 (lower is better)
Translates to: TETWHGRACFTPFPIWCTMAWEG*FHSISN
Trigger: ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCAT...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CAA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACACCTCTTCAGTGCCTaGGGATACGCAACATACATT +
Preference number: 3 (lower is better)
Translates to: TETWHGRACFTPFPIWCTHLFSA*GYATYI
Trigger: AATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR-3UTR CAA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAGGACAAGTGCTGAGGTaGGGAGTGCCCACTGAAATA +
Preference number: 3 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIGQVLR*GVPTEI
Trigger: TATTTCAGTGGGCACTCCCAACCTCAGCACTTGTCC...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp TTTGATAAAACATGGCTGGAGATGGCTATGAATCGCTaGGTAAGCTTCAGACAGCGGTTCTGCATGGGTCAT +
Preference number: 3 (lower is better)
Translates to: FDKTWLEMAMNR*VSFRQRFCMGH
Trigger: ATGACCCATGCAGAACCGCTGTCTGAAGCTTACTCAGCGATTCATAGCCATCTCCAGCCATGTTTTATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp CTTTGTAAGAGCAAAGTGGGCCTGCCAGGATCCCCATaGAGTTACAGTTGTAACTCAAATACTCCAGTAAGC +
Preference number: 3 (lower is better)
Translates to: LCKSKVGLPGSP*SYSCNSNTPVS
Trigger: GCTTACTGGAGTATTTGAGTTACAACTGTAACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR CAA 90 bp GTAAATACTAAATTCTGGCTGCTGGAGTTGGGTCTCTCCTCATGTTTGGGCGACATGGACAAGACTGGTTaGGAACACATTTGTGTTCAA +
Preference number: 3 (lower is better)
Translates to: VNTKFWLLELGLSSCLGDMDKTG*EHICVQ
Trigger: TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCAT...GTCGCCCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR GCA 72 bp ATCCAGATTGACACGATTATTTTTCCACCTCTTCAGTaGCTTGGGATACGCAACATACATTCAGCAACAGGG +
Preference number: 3 (lower is better)
Translates to: IQIDTIIFPPLQ*LGIRNIHSATG
Trigger: CCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAAAATAATCGTGTCAATCTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR GCA 72 bp GAAAGTAATGTAGTCTTTGTAAGAGCAAAGTGGGCCTaGCAGGATCCCCATGAAGTTACAGTTGTAACTCAA +
Preference number: 3 (lower is better)
Translates to: ESNVVFVRAKWA*QDPHEVTVVTQ
Trigger: TTGAGTTACAACTGTAACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAAGACTACATTACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR CCA 72 bp TGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTaGTGTACAGGAAATTCCTTATCTATAACTGTCCAT +
Preference number: 3 (lower is better)
Translates to: WHGRACFTPFPI*CTGNSLSITVH
Trigger: ATGGACAGTTATAGATAAGGAATTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR CCA 72 bp AGCTCAAGTAGTAAGTCAATGACCATGACAATAGTGTaGACTGTGAATGTGCCCAAGTCCTTGAATCCTACA +
Preference number: 3 (lower is better)
Translates to: SSSSKSMTMTIV*TVNVPKSLNPT
Trigger: TGTAGGATTCAAGGACTTGGGCACATTCACAGTCCACACTATTGTCATGGTCATTGACTTACTACTTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp CCTAAAATAGTGAACGTGAAACAGCTAAGACTCTGGTaGAAGGCAGTCAGTCACCTTTCCCATTTCAAACAT +
Preference number: 3 (lower is better)
Translates to: PKIVNVKQLRLW*KAVSHLSHFKH
Trigger: ATGTTTGAAATGGGAAAGGTGACTGACTGCCTTTCACCAGAGTCTTAGCTGTTTCACGTTCACTATTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp TTGTACTCCACAGGTAATGTTGTACAGATGGTCAAGTaGAATAACAAGGACAGCCCACAAACTAAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LYSTGNVVQMVK*NNKDSPQTKSF
Trigger: GAAGCTCTTAGTTTGTGGGCTGTCCTTGTTATTTCACTTGACCATCTGTACAACATTACCTGTGGAGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR CAA 90 bp TCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATAGAGAACAACCGCAGTATTaGGAGATGGCTCTGTTCTTT +
Preference number: 3 (lower is better)
Translates to: SMQNSIWVWQPKERYTDREQPQY*EMALFF
Trigger: AAAGAACAGAGCCATCTCCAAATACTGCGGTTGTTC...TCTATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR CCA 72 bp GGCTGTGTTTCACAAAATTTCCCAGTCAATGGCCTATaGAACGTGTCAGTTCTTTATTGGGATTTGCATAAT +
Preference number: 3 (lower is better)
Translates to: GCVSQNFPVNGL*NVSVLYWDLHN
Trigger: ATTATGCAAATCCCAATAAAGAACTGACACGTTCCATAGGCCATTGACTGGGAAATTTTGTGAAACACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CCA 72 bp CATCAATGTTGTACTCCACAGGTAATGTTGTACAGATaGTCAAGTGAAATAACAAGGACAGCCCACAAACTA +
Preference number: 3 (lower is better)
Translates to: HQCCTPQVMLYR*SSEITRTAHKL
Trigger: TAGTTTGTGGGCTGTCCTTGTTATTTCACTTGACCATCTGTACAACATTACCTGTGGAGTACAACATTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR-3UTR CAA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATATCTCTATCATCCAGATaGACACGATTATTTTTCCAC +
Preference number: 3 (lower is better)
Translates to: STTSHSLNAHWVKCSSFISLSSR*TRLFFH
Trigger: GTGGAAAAATAATCGTGTCAATCTGGATGATAGAGA...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR TCA 72 bp CATTTGGAAAAGTTAATTTCTCTCTATCATCCAGATTaGCACGATTATTTTTCCACCTCTTCAGTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: HLEKLISLYHPD*HDYFSTSSVPW
Trigger: CCAAGGCACTGAAGAGGTGGAAAAATAATCGTGTCAATCTGGATGATAGAGAGAAATTAACTTTTCCAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CCA 72 bp AGCCAAAAGAGAGATATACAGATAGATAATCTTTGTTaGCCACGAAGCTGTAGCTTGAAAATGCTCATCAAT +
Preference number: 3 (lower is better)
Translates to: SQKRDIQIDNLC*PRSCSLKMLIN
Trigger: ATTGATGAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATCTATCTGTATATCTCTCTTTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR GCA 72 bp CTCCTAAAATCCTTTACAGCACACAACATCAACTACTaGAGTAGCGTTCTCACAATATTACACTTGAAAATA +
Preference number: 3 (lower is better)
Translates to: LLKSFTAHNINY*SSVLTILHLKI
Trigger: TATTTTCAAGTGTAATATTGTGAGAACGCTACTGCAGTAGTTGATGTTGTGTGCTGTAAAGGATTTTAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATTGCTGGTGGTGGCCATaGCCGGGCCTCGGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNCWWWP*PGLGAP
Trigger: CGGAGCGCCGAGGCCCGGCCATGGCCACCACCAGCA...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCAGCCCGTGGTGCTGGTaGTGGCCATGGCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AWPTETWHGRACFTPFPISPWCW*WPWPGL
Trigger: GAGGCCCGGCCATGGCCACCACCAGCACCACGGGCT...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTGCTGCACGGCGTTGCTaGGGGGCTGCAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAAARRC*GAAAGW
Trigger: CCACCCTGCTGCAGCCCCTCAGCAACGCCGTGCAGC...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTAACAGGGCACGCGTGTaGCCCTACGGACAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLNRARV*PYGQVL
Trigger: CAGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTT...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGGCAGGGTGGAGCCCGTaGTGCTGGTGGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWAGWSP*CWWWPW
Trigger: CCATGGCCACCACCAGCACCACGGGCTCCACCCTGC...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGTGGTCGATGGGCAGCTaGACGGCGTTGCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LFSALGYATYIQQQGTRVWSMGS*TALLRG
Trigger: GCCCCTCAGCAACGCCGTGCAGCTGCCCATCGACCA...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACGCGGCTGTGCCCCGTaGATTCCACCGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTRGCAP*IPPEAT
Trigger: CGTGGCCTCCGGTGGAATGCACGGGGCACAGCCGCG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp ACAGCCCACAAACTAAGAGCTTCTGAACAACCGCAGTATTTGGAGATGGCTCTGCGCCCGCTCGCGCTGTaGCGGGCGACGACGAGGATG +
Preference number: 4 (lower is better)
Translates to: TAHKLRASEQPQYLEMALRPLAL*RATTRM
Trigger: CATCCTCGTCGTCGCCCGGCACAGCGCGAGCGGGCG...CAGAGCCATCTCCAAATACTGCGGTTGTTCAGAAGCTCTTAGTTTGTGGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp CTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCATCCTGGAGCCCGTGGTGCTaGTGGTGGCCATGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGMRLTAKSLCEEVSSSSWSPWC*WWPWPG
Trigger: GCCCGGCCATGGCCACCACCAGCACCACGGGCTCCA...GGATGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTCCTACGGACAAGTGCTaGGGTTGGGAGTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGPTDKC*GWECPL
Trigger: CAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGG...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTGTCTCTCCTCATGTTTaGGCGACTGAGGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLVSPHV*ATEGST
Trigger: AGTTGAGCCCTCAGTCGCCCAAACATGAGGAGAGAC...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTAACAGGGCACGCGTGTaGCCCTACGGACAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSANRARV*PYGQVL
Trigger: CAGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTT...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp AAGCTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCAGCAGGGTGGAGCCCGTaGTGCTGGTGGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KLGMRLTAKSLCEEVSSSAGWSP*CWWWPW
Trigger: CCATGGCCACCACCAGCACCACGGGCTCCACCCTGC...TGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATGGCCACTCCACTGCCTaGCATCAAATCCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNGHSTA*HQIPLF
Trigger: GAAGAGTGGGATTTGATGCCAGGCAGTGGAGTGGCC...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GTAAATACTAAATTCTGGCTGCTGGAGTTGGGTCTCTCCTCATGTTTGGGCGACGCAGAGTCGCGGCTGTaGCCCGTGCATTCCACCGGA +
Preference number: 4 (lower is better)
Translates to: VNTKFWLLELGLSSCLGDAESRL*PVHSTG
Trigger: TCCGGTGGAATGCACGGGGCACAGCCGCGACTCTGC...GTCGCCCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTTGGCCCACGGAGACATaGCATGGGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAWPTET*HGRACF
Trigger: GAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTATCGTGCCCCTTCTaGTTCAGAGGAGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNLSCPF*FRGAVT
Trigger: TGTGACTGCTCCTCTGAACCAGAAGGGGCACGATAG...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATACACCCAACTGGTCCTaGACTCTTAGGATTAACCCG +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNTPNWS*TLRINP
Trigger: CGGGTTAATCCTAAGAGTTCAGGACCAGTTGGGTGT...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCCAGCTAAGACTCTGGTaGAAGGCAGTCAGTCACCTT +
Preference number: 4 (lower is better)
Translates to: AWPTETWHGRACFTPFPIQLRLW*KAVSHL
Trigger: AAGGTGACTGACTGCCTTTCACCAGAGTCTTAGCTG...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTATACTAAATTCTGGCTaGTGGAGTTGGGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLILNSG*WSWVSP
Trigger: AGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTAT...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TACAGTTGTAACTCAAATACTCCAGTAAGCTTGGCATGCGCCTTACAGCTAAATCCGTGGTGCTGGTGGTaGCCATGGCCGGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: YSCNSNTPVSLACALQLNPWCWW*PWPGLG
Trigger: GCCGAGGCCCGGCCATGGCCACCACCAGCACCACGG...ATTTAGCTGTAAGGCGCATGCCAAGCTTACTGGAGTATTTGAGTTACAACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATTTCTTACATAAGGCGTaGCCCACGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNFLHKA*PTETWH
Trigger: ATGCCATGTCTCCGTGGGCCACGCCTTATGTAAGAA...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGTCTGGCTGCTGGAGTTaGGTCTCTCCTCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLSGCWS*VSPHVW
Trigger: CCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGA...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGAAGGCAGAACCAGAATaGAGATCCAGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWKAEPE*RSRSPP
Trigger: AGGAGGAGACCTGGATCTTCATTCTGGTTCTGCCTT...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATATGTGCCCAAGTCCTTaGATCCTACAGACCTTGCTA +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNMCPSP*ILQTLL
Trigger: TAGCAAGGTCTGTAGGATTCAAGGACTTGGGCACAT...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCGAGCACATCTCAGTTTaGCTGACACAGTGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AWPTETWHGRACFTPFPIEHISV*LTQWEF
Trigger: AAACTCCCACTGTGTCAGTCAAACTGAGATGTGCTC...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGCTTCTTCATTCCTaGCTTCCTTCGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLVLLHS*LPSSPL
Trigger: GAGAGGTGACGAAGGAAGGCAGGAATGAAGAAGCAC...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCATCAATGTTGTATGCTGGTGGTGGCCATaGCCGGGCCTCGGCGCTCCG +
Preference number: 4 (lower is better)
Translates to: DNLCWPRSCSLKMLINVVCWWWP*PGLGAP
Trigger: CGGAGCGCCGAGGCCCGGCCATGGCCACCACCAGCA...TACAACATTGATGAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATATGGAGCCCGTGGTGCTaGTGGTGGCCATGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIWSPWC*WWPWPG
Trigger: GCCCGGCCATGGCCACCACCAGCACCACGGGCTCCA...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTACTACAAAGTTGACCTaGTCGATGGGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSATTKLT*SMGSCT
Trigger: CGTGCAGCTGCCCATCGACCAGGTCAACTTTGTAGT...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp AACAGCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTCACGGAGACATGGCATaGGAGGGCTTGTTTCACTCC +
Preference number: 4 (lower is better)
Translates to: NSPQSLPDHCFSDECLEAHGDMA*EGLFHS
Trigger: GGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTG...AGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR CCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGCACCACAGTCCTCTGTaGGATCGCAGGAGATGCTTA +
Preference number: 4 (lower is better)
Translates to: LFSALGYATYIQQQGTRVHHSPL*DRRRCL
Trigger: TAAGCATCTCCTGCGATCCCACAGAGGACTGTGGTG...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTTCGTCATACCCTCTaGAACCAAAGCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWFRHTL*NQSLQH
Trigger: ATGCTGCAGGCTTTGGTTTCAGAGGGTATGACGAAA...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGCATGCCCATTTTTGCTaGGACCTCAAAAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWHAHFC*DLKSCK
Trigger: CTTGCAGCTTTTGAGGTCTCAGCAAAAATGGGCATG...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTGTTGATTCAGGGGTATaGAAATCAGTCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLVDSGV*KSVKLD
Trigger: ATCCAGTTTGACTGATTTTCATACCCCTGAATCAAC...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp ACCTACCTAGCGATTTCTCTTTCAAAACCTTTGAGCAACCTACCAGTATTATTTCCGTGGTGCTGGTGGTaGCCATGGCCGGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TYLAISLSKPLSNLPVLFPWCWW*PWPGLG
Trigger: GCCGAGGCCCGGCCATGGCCACCACCAGCACCACGG...AAATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGAAATCGCTAGGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTATGCAAAATAGTATTTaGGTCTGGCAGCCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLMQNSI*VWQPKE
Trigger: CTCTTTTGGCTGCCAGACCCAAATACTATTTTGCAT...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAATGGCCCACGGAGACATaGCATGGGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKWPTET*HGRACF
Trigger: GAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAAGGGGATTCACCACGTTaGCCAGGCTGGTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKGDSPR*PGWSPT
Trigger: AGTTGGAGACCAGCCTGGCCAACGTGGTGAATCCCC...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAACACGAAGCTGTAGCTTaGAAATGCTCATCAATGTTG +
Preference number: 4 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQHEAVA*KCSSML
Trigger: CAACATTGATGAGCATTTTCAAGCTACAGCTTCGTG...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGCATAACACACCCTTTTaGGCCAAAGAGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLHNTPF*AKELSE
Trigger: TTCAGACAGCTCTTTGGCTCAAAAGGGTGTGTTATG...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTTTCAGCATCTAAGATaGGTGTATCAACGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGFQHLR*VYQRPA
Trigger: GGCTGGTCGTTGATACACTCATCTTAGATGCTGAAA...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGAGCCTTCCCGATCACTaGTTTAGTGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWSLPDH*FSDECL
Trigger: GAGACATTCATCACTAAAGCAGTGATCGGGAAGGCT...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR GCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTTCCACCTCTTCAGTaGCTTGGGATACGCAACATA +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWFPPLQ*LGIRNI
Trigger: TATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAA...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATAACAACCGCAGTATTTaGAGATGGCTCTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNNNRSI*RWLCSF
Trigger: GAAAGAACAGAGCCATCTCCAAATACTGCGGTTGTT...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAACACGGAGACATGGCATaGGAGGGCTTGTTTCACTCC +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKHGDMA*EGLFHS
Trigger: GGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTG...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp AACAGCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTTTCTTACATAAGGCGTaGCCCACGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: NSPQSLPDHCFSDECLEAFLHKA*PTETWH
Trigger: ATGCCATGTCTCCGTGGGCCACGCCTTATGTAAGAA...AGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR CCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGACCTCTTCAGTGCCTTaGGATACGCAACATACATTC +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLTSSVP*DTQHTF
Trigger: GAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGT...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp CTGTGCCCCGTGCATTCCACCGGAGGCCACGCAGTGCTTCTTCATTCCTGCCTTCAGCTACCTATAATTTaGCGTCCATTACTGTTTACA +
Preference number: 4 (lower is better)
Translates to: LCPVHSTGGHAVLLHSCLQLPII*RPLLFT
Trigger: TGTAAACAGTAATGGACGCCAAATTATAGGTAGCTG...AAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGGTGGAATGCACGGGGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATAGATAATGCTGCACGGCGTTGCTaGGGGGCTGCAGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CKIVFGSGSQKRDIQIDNAARRC*GAAAGW
Trigger: CCACCCTGCTGCAGCCCCTCAGCAACGCCGTGCAGC...ATTATCTATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTGTACAGATGGTCAAGTaGAATAACAAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAVQMVK*NNKDSP
Trigger: TGGGCTGTCCTTGTTATTTCACTTGACCATCTGTAC...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGGTACAGATGGTCAAGTaGAATAACAAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LFSALGYATYIQQQGTRVVQMVK*NNKDSP
Trigger: TGGGCTGTCCTTGTTATTTCACTTGACCATCTGTAC...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGCCACTTATAAAATGGTaGCAGCTGAGGCATACCAAA +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLPLIKW*QLRHTK
Trigger: TTTGGTATGCCTCAGCTGTCACCATTTTATAAGTGG...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GATATACAGATAGATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCTGGTCGATGGGCAGCTaGACGGCGTTGCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DIQIDNLCWPRSCSLKMLWSMGS*TALLRG
Trigger: GCCCCTCAGCAACGCCGTGCAGCTGCCCATCGACCA...GAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATCTATCTGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR GCA 90 bp AAGCTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCAAGAGCAAAGTGGGCCTaGCAGGATCCCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: KLGMRLTAKSLCEEVSSSRAKWA*QDPHEV
Trigger: AACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCT...TGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR GCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTCCGGAGGCCACGCAGTaGTTCTTCATTCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRPEATQ*FFIPAF
Trigger: GAAGGCAGGAATGAAGAAGCACTGCGTGGCCTCCGG...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTCGCAGTATTTGGAGATaGCTCTGTTCTTTCATACTG +
Preference number: 4 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGRSIWR*LCSFIL
Trigger: CAGTATGAAAGAACAGAGCCATCTCCAAATACTGCG...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTCCAGTCAATGGCCTATaGAACGTGTCAGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGPVNGL*NVSVLY
Trigger: ATAAAGAACTGACACGTTCCATAGGCCATTGACTGG...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CAA 72 bp CACCCAACTGGTCCTGAACTCTTAGGATTAACCCGTTaGCTTATGGCTGAGGAACTTGGGGTCTACAGGACA +
Preference number: 4 (lower is better)
Translates to: HPTGPELLGLTR*LMAEELGVYRT
Trigger: TGTCCTGTAGACCCCAAGTTCCTCAGCCATAAGCAAACGGGTTAATCCTAAGAGTTCAGGACCAGTTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCAAACTAGTGATCTTCTaGGTAATGATCATCATTGGG +
Preference number: 4 (lower is better)
Translates to: AWPTETWHGRACFTPFPIKLVIF*VMIIIG
Trigger: CCCAATGATGATCATTACTCAGAAGATCACTAGTTT...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACTGCCAGGATCCCCATaGAGTTACAGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTLPGSP*SYSCNS
Trigger: TGAGTTACAACTGTAACTTCATGGGGATCCTGGCAG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGTTTCACCAGATTGTGTaGTATGGTATGATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLFHQIV*YGMICL
Trigger: AAGGCAGATCATACCATATCACACAATCTGGTGAAA...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTCAAACTAAGAGCTTCTaGACAACCGCAGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAQTKSF*TTAVFG
Trigger: TCCAAATACTGCGGTTGTTCAGAAGCTCTTAGTTTG...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATTGGATTGTGAGAGCTaGATGTTTTCATGTGTATTC +
Preference number: 4 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQLDCES*MFSCVF
Trigger: GAATACACATGAAAACATTCAGCTCTCACAATCCAA...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGGTTGGGAGTGCCCACTaGAATATGGAAATATTCTTA +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWVGSAH*NMEIFL
Trigger: TAAGAATATTTCCATATTTCAGTGGGCACTCCCAAC...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAAATGGCTATGAATCGCTaGGTAAGCTTCAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKMAMNR*VSFRQR
Trigger: CCGCTGTCTGAAGCTTACTCAGCGATTCATAGCCAT...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTTCAGAAAATTCTTTTaGGCCAAAGAGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: AWPTETWHGRACFTPFPIFRKFF*AKELSE
Trigger: TTCAGACAGCTCTTTGGCTCAAAAGAATTTTCTGAA...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR GCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAATATGGCCTTCTATCGTaGCCCTTCTGGTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKYGLLS*PFWFRG
Trigger: TCCTCTGAACCAGAAGGGGCACGATAGAAGGCCATA...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp AAGCTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCATTTGTAAGAGCAAAGTaGGCCTGCCAGGATCCCCAT +
Preference number: 4 (lower is better)
Translates to: KLGMRLTAKSLCEEVSSSFVRAK*ACQDPH
Trigger: ATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAA...TGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGATAGATAATCTTTGTTaGCCACGAAGCTGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWIDNLC*PRSCSL
Trigger: CAAGCTACAGCTTCGTGGCCAACAAAGATTATCTAT...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGAAATTTCCCAGTCAATaGCCTATGGAACGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFSALGYATYIQQQGTRVKFPSQ*PMERVS
Trigger: ACTGACACGTTCCATAGGCCATTGACTGGGAAATTT...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTCAAGATGGACAAGACTaGTTTGGAACACATTTGTGT +
Preference number: 4 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGQDGQD*FGTHLC
Trigger: ACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTG...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TTCATCCTTCCGAAACATCCCATCATGAATTTCGCAAGCCAAACTAGTGATCTTGCAGTAACTGGTCGATaGGCAGCTGCACGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: FILPKHPIMNFASQTSDLAVTGR*AAARRC
Trigger: GCAACGCCGTGCAGCTGCCCATCGACCAGTTACTGC...AAGATCACTAGTTTGGCTTGCGAAATTCATGATGGGATGTTTCGGAAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTGTGTGATATGGTATaGTCTGCCTTCAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWLCDMV*SAFNES
Trigger: ACTTTCATTGAAGGCAGATCATACCATATCACACAA...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGCTGTAAAACGTGAGTaGTGGTTTTATAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGAVKRE*WFYRKK
Trigger: CTTCTTTCTATAAAACCATCACTCACGTTTTACAGC...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGGCTGTAAAACGTGAGTaGTGGTTTTATAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWAVKRE*WFYRKK
Trigger: CTTCTTTCTATAAAACCATCACTCACGTTTTACAGC...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR GCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTAGAGCAAAGTGGGCCTaGCAGGATCCCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRRAKWA*QDPHEV
Trigger: AACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCT...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAATGGGATCGCAGGAGATaGTTAGTAATCCAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKWDRRR*LVIQGK
Trigger: CTTGCCTTGGATTACTAAGCATCTCCTGCGATCCCA...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGCACACTGGGTTAAATaGAGCAGTTTTATAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLAHWVK*SSFIRY
Trigger: ATACCTTATAAAACTGCTGCATTTAACCCAGTGTGC...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTCCAGATTGTGTGATATaGTATGATCTGCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAPDCVI*YDLPSM
Trigger: CATTGAAGGCAGATCATACCATATCACACAATCTGG...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGACTCCATTTCCAATCTaGTGTACAGGAAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWTPFPI*CTGNSL
Trigger: TAAGGAATTTCCTGTACACCAGATTGGAAATGGAGT...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGTTATCAATCCTTTCCTaGGTAGGGTTAGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: LFSALGYATYIQQQGTRVLSILS*VGLALS
Trigger: TGATAAGGCTAACCCTACCCAGGAAAGGATTGATAA...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTGTGTGTCACACATaGTGGAGACCAATAAATATA +
Preference number: 4 (lower is better)
Translates to: WPTETWHGRACFTPFPIWCVCHT*WRPINI
Trigger: TATATTTATTGGTCTCCACCATGTGTGACACACACA...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAACTTTTGCTTCAGCATTaGGAGCACGCGTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKLLLQH*EHAFIK
Trigger: CTTGATGAACGCGTGCTCCCAATGCTGAAGCAAAAG...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCAATTAAAATGTAATTaGCTGCAACCTCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNQLKCN*LQPLYK
Trigger: CTTGTACAGAGGTTGCAGCCAATTACATTTTAATTG...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACGAAACATCCCATCATaGATTTCGCAAGCCAAACTA +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTRNIPS*ISQAKL
Trigger: TAGTTTGGCTTGCGAAATTCATGATGGGATGTTTCG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp CTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCATCCCGAAACATCCCATCATaGATTTCGCAAGCCAAACTA +
Preference number: 4 (lower is better)
Translates to: LGMRLTAKSLCEEVSSSSRNIPS*ISQAKL
Trigger: TAGTTTGGCTTGCGAAATTCATGATGGGATGTTTCG...GGATGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTTTGTGTGATATGGTATaGTCTGCCTTCAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSALCDMV*SAFNES
Trigger: ACTTTCATTGAAGGCAGATCATACCATATCACACAA...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACACGAAGCTGTAGCTTaGAAATGCTCATCAATGTTG +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTHEAVA*KCSSML
Trigger: CAACATTGATGAGCATTTTCAAGCTACAGCTTCGTG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGAGCCAAAGAGCTGTCTaGATATTCCAATTATCAAGA +
Preference number: 4 (lower is better)
Translates to: LFSALGYATYIQQQGTRVSQRAV*IFQLSR
Trigger: TCTTGATAATTGGAATATTCAGACAGCTCTTTGGCT...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAACCTACGGACAAGTGCTaGGGTTGGGAGTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQPTDKC*GWECPL
Trigger: CAGTGGGCACTCCCAACCTCAGCACTTGTCCGTAGG...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTATCTTGCTTTCTAGATaGCAGTGCCAAGATCATATT +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAILLSR*QCQDHI
Trigger: AATATGATCTTGGCACTGTCATCTAGAAAGCAAGAT...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTTTCCCCCAATTACCCTaGGTTCCAATAAAAATACTT +
Preference number: 4 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAFPQLP*VPIKIL
Trigger: AAGTATTTTTATTGGAACTCAGGGTAATTGGGGGAA...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATACTGAGGCCACTCCACTaGCTGGCATCAAATCCCACT +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFILRPLH*LASNPT
Trigger: AGTGGGATTTGATGCCAGGCAGTGGAGTGGCCTCAG...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTGAAGTCAGAAGGCTTTaGCCCCTCCCCTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVEVRRL*PLPSYR
Trigger: CCTGTAGGAGGGGAGGGGGCAAAGCCTTCTGACTTC...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAAAGTTCGAAACCAAATaGCTGCTAGCAAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTKFETK*LLARQR
Trigger: TCTTTGCCTTGCTAGCAGCCATTTGGTTTCGAACTT...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACGCAGTATTTGGAGATaGCTCTGTTCTTTCATACTG +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTRSIWR*LCSFIL
Trigger: CAGTATGAAAGAACAGAGCCATCTCCAAATACTGCG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTAATGTTGTACAGATaGTCAAGTGAAATAACAAGG +
Preference number: 4 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLVMLYR*SSEITR
Trigger: CCTTGTTATTTCACTTGACCATCTGTACAACATTAC...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
3UTR CAA 72 bp ATGACAATAGTGTGGACTGTGAATGTGCCCAAGTCCTaGAATCCTACAGACCTTGCTAATGGCTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: MTIVWTVNVPKS*NPTDLANGSVH
Trigger: GTGAACGGAGCCATTAGCAAGGTCTGTAGGATTCAAGGACTTGGGCACATTCACAGTCCACACTATTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCATCCTCAAACTAAGAGCTTCTaGACAACCGCAGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: LACALQLNPSVRKSVLHPQTKSF*TTAVFG
Trigger: TCCAAATACTGCGGTTGTTCAGAAGCTCTTAGTTTG...AGGATGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGTTGGGAGTGCCCACTaGAATATGGAAATATTCTTA +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTVGSAH*NMEIFL
Trigger: TAAGAATATTTCCATATTTCAGTGGGCACTCCCAAC...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAATCTGGAAGCGCTCTTTaGCTGCACAAGGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKSGSAL*LHKVIK
Trigger: TTTAATTACCTTGTGCAGTCAAAGAGCGCTTCCAGA...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TTCATCCTTCCGAAACATCCCATCATGAATTTCGCAAGCCAAACTAGTGATCTTACACAAAGCAGTAACTaGTCGATGGGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: FILPKHPIMNFASQTSDLTQSSN*SMGSCT
Trigger: CGTGCAGCTGCCCATCGACCAGTTACTGCTTTGTGT...AAGATCACTAGTTTGGCTTGCGAAATTCATGATGGGATGTTTCGGAAGGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
3UTR CAA 72 bp AGATTGACACGATTATTTTTCCACCTCTTCAGTGCCTaGGGATACGCAACATACATTCAGCAACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RLTRLFFHLFSA*GYATYIQQQGT
Trigger: CGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAAAATAATCGTGTCAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GTAAATACTAAATTCTGGCTGCTGGAGTTGGGTCTCTCCTCATGTTTGGGCGACGATCATCATTGGGCCTaGAAAATCAGCAGAATATTG +
Preference number: 4 (lower is better)
Translates to: VNTKFWLLELGLSSCLGDDHHWA*KISRIL
Trigger: CAATATTCTGCTGATTTTTCAGGCCCAATGATGATC...GTCGCCCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp TTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCATCCTGATCATCATTGGGCCTaGAAAATCAGCAGAATATTG +
Preference number: 4 (lower is better)
Translates to: LACALQLNPSVRKSVLHPDHHWA*KISRIL
Trigger: CAATATTCTGCTGATTTTTCAGGCCCAATGATGATC...AGGATGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAACTCTATCATCCAGATTaGCACGATTATTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKLYHPD*HDYFST
Trigger: GGTGGAAAAATAATCGTGTCAATCTGGATGATAGAG...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCCTGGGTATACCCCGTaGCAAATGGCAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVPGYTP*QMAERM
Trigger: CATTCTCTCTGCCATTTGGCACGGGGTATACCCAGG...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTAGCCTTCCCGATCACTaGTTTAGTGATGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRSLPDH*FSDECL
Trigger: GAGACATTCATCACTAAAGCAGTGATCGGGAAGGCT...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR GCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTTTTCCACCTCTTCAGTaGCTTGGGATACGCAACATA +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRFPPLQ*LGIRNI
Trigger: TATGTTGCGTATCCCAAGGCACTGAAGAGGTGGAAA...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTATTTAATAGTATTTGGGTCTaGCAGCCAAAAGAGAGATAT +
Preference number: 4 (lower is better)
Translates to: ALRAFPITALVMNVSRLFNSIWV*QPKERY
Trigger: ATATCTCTCTTTTGGCTGCCAGACCCAAATACTATT...AAATAGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR CCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTACCTCTTCAGTGCCTTaGGATACGCAACATACATTC +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRTSSVP*DTQHTF
Trigger: GAATGTATGTTGCGTATCCCAAGGCACTGAAGAGGT...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TACAGTTGTAACTCAAATACTCCAGTAAGCTTGGCATGCGCCTTACAGCTAAATCTGCCAGGATCCCCATaGAGTTACAGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: YSCNSNTPVSLACALQLNLPGSP*SYSCNS
Trigger: TGAGTTACAACTGTAACTTCATGGGGATCCTGGCAG...ATTTAGCTGTAAGGCGCATGCCAAGCTTACTGGAGTATTTGAGTTACAACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTCAAACTAAGAGCTTCTaGACAACCGCAGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRQTKSF*TTAVFG
Trigger: TCCAAATACTGCGGTTGTTCAGAAGCTCTTAGTTTG...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR TCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAATTTTTAAGTCTCACATaGCGGCGCAGAGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQFLSLT*RRRALA
Trigger: TGCCAGGGCTCTGCGCCGTCATGTGAGACTTAAAAA...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAACTCTTTCAAAACCTTTaGGCAACCTACCAGTATTAT +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKLFQNL*ATYQYY
Trigger: ATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAG...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GTAAATACTAAATTCTGGCTGCTGGAGTTGGGTCTCTCCTCATGTTTGGGCGACCTAAGGTTTACAGGCTaGGAAATAAATTCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VNTKFWLLELGLSSCLGDLRFTG*EINSGN
Trigger: GTTACCTGAATTTATTTCTCAGCCTGTAAACCTTAG...GTCGCCCAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTGAAATGTCAGGGCTTTaGGCTCAAGTAGTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRREMSGL*AQVVSQ
Trigger: TTGACTTACTACTTGAGCTCAAAGCCCTGACATTTC...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp ACCTACCTAGCGATTTCTCTTTCAAAACCTTTGAGCAACCTACCAGTATTATTTCCACCAGTGCAGCTCTaGCAGACTAGAAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: TYLAISLSKPLSNLPVLFPPVQL*QTRNEW
Trigger: CCACTCATTTCTAGTCTGTCAGAGCTGCACTGGTGG...AAATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGAAATCGCTAGGTAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAGCAATAAGCCACCAGTaGAGCTCTGACAGACTAGAA +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIAISHQ*SSDRLE
Trigger: TTCTAGTCTGTCAGAGCTGCACTGGTGGCTTATTGC...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTATTTAGAAAGAAGCACAAATaGCACAACTGTGTAACTTAT +
Preference number: 4 (lower is better)
Translates to: ALRAFPITALVMNVSRLFRKKHK*HNCVTY
Trigger: ATAAGTTACACAGTTGTGCCATTTGTGCTTCTTTCT...AAATAGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR CCA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAAACTCCATTTCCAATCTaGTGTACAGGAAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKTPFPI*CTGNSL
Trigger: TAAGGAATTTCCTGTACACCAGATTGGAAATGGAGT...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAATAGATTTGACTACTTaGTGTTGCAGAAAAACACTG +
Preference number: 4 (lower is better)
Translates to: TETWHGRACFTPFPIWCTIDLTT*CCRKTL
Trigger: CAGTGTTTTTCTGCAACACCAAGTAGTCAAATCTAT...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTTTACTTTCATTCCTATaGCCTTCTATCGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRLLSFL*PSIVPL
Trigger: AAGGGGCACGATAGAAGGCCATAGGAATGAAAGTAA...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GGAAGTCAGTTCTTCATCCTTCCGAAACATCCCATCATGAATTTCGCAAGCCAATTTCACCAGATTGTGTaGTATGGTATGATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GSQFFILPKHPIMNFASQFHQIV*YGMICL
Trigger: AAGGCAGATCATACCATATCACACAATCTGGTGAAA...TTGGCTTGCGAAATTCATGATGGGATGTTTCGGAAGGATGAAGAACTGACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTTTTCGTCATACCCTCTaGAACCAAAGCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVFRHTL*NQSLQH
Trigger: ATGCTGCAGGCTTTGGTTTCAGAGGGTATGACGAAA...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTTCTGAAACCAAAGCCTaGAGCATTATTAATGGCATC +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRSETKA*SIINGI
Trigger: GATGCCATTAATAATGCTGCAGGCTTTGGTTTCAGA...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR GCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATATTCAGACAGCGGTTCTaGATGGGTCATCACACTATA +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIFRQRF*MGHHTI
Trigger: TATAGTGTGATGACCCATGCAGAACCGCTGTCTGAA...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp ACCTACCTAGCGATTTCTCTTTCAAAACCTTTGAGCAACCTACCAGTATTATTTTTTGTAAGAGCAAAGTaGGCCTGCCAGGATCCCCAT +
Preference number: 4 (lower is better)
Translates to: TYLAISLSKPLSNLPVLFFVRAK*ACQDPH
Trigger: ATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAA...AAATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGAAATCGCTAGGTAGGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTCCAGATTGTGTGATATaGTATGATCTGCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRPDCVI*YDLPSM
Trigger: CATTGAAGGCAGATCATACCATATCACACAATCTGG...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTATGCAAAATAGTATTTaGGTCTGGCAGCCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRMQNSI*VWQPKE
Trigger: CTCTTTTGGCTGCCAGACCCAAATACTATTTTGCAT...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAGAGAGAATGAACGTCTaGATAGTTGGACTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIERMNV*IVGLKE
Trigger: CTCCTTCAGTCCAACTATCCAGACGTTCATTCTCTC...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTGTGATTATTTGTAGGTaGCTAGATAGGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRVIICR*LDRLNQ
Trigger: TTGGTTCAGCCTATCTAGCCACCTACAAATAATCAC...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCATCAATGTTGTAGTACAGATGGTCAAGTaGAATAACAAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: DNLCWPRSCSLKMLINVVVQMVK*NNKDSP
Trigger: TGGGCTGTCCTTGTTATTTCACTTGACCATCTGTAC...TACAACATTGATGAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAATCATGACAACCTTTTaGAATGTCAGGGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIIMTTF*NVRALS
Trigger: GCTCAAAGCCCTGACATTTCAAAAGGTTGTCATGAT...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GCGTCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATATAGATAATCTTTGTTaGCCACGAAGCTGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASMQNSIWVWQPKERYTDIDNLC*PRSCSL
Trigger: CAAGCTACAGCTTCGTGGCCAACAAAGATTATCTAT...ATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp CTAAATCCCTCTGTGAGGAAGTCAGTTCTTCATCCTTCCGAAACATCCCATCATAATAGTATTTGGGTCTaGCAGCCAAAAGAGAGATAT +
Preference number: 4 (lower is better)
Translates to: LNPSVRKSVLHPSETSHHNSIWV*QPKERY
Trigger: ATATCTCTCTTTTGGCTGCCAGACCCAAATACTATT...ATGATGGGATGTTTCGGAAGGATGAAGAACTGACTTCCTCACAGAGGGATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAAGAACGTCTGGATAGTTaGACTGAAGGAGGTTCGTTC +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQERLDS*TEGGSF
Trigger: GAACGAACCTCCTTCAGTCCAACTATCCAGACGTTC...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp GCGTCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATTTGTGTGATATGGTATaGTCTGCCTTCAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: ASMQNSIWVWQPKERYTDLCDMV*SAFNES
Trigger: ACTTTCATTGAAGGCAGATCATACCATATCACACAA...ATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR TCA 90 bp TGTGTCTCTTCTTTTCCATTTTCACCAGATTGTGTGATATGGTATGATCTGCCTCACGAAGCTGTAGCTTaGAAATGCTCATCAATGTTG +
Preference number: 4 (lower is better)
Translates to: CVSSFPFSPDCVIWYDLPHEAVA*KCSSML
Trigger: CAACATTGATGAGCATTTTCAAGCTACAGCTTCGTG...AGGCAGATCATACCATATCACACAATCTGGTGAAAATGGAAAAGAAGAGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR GCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATACACAACATCAACTACTaGAGTAGCGTTCTCACAATA +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIHNINY*SSVLTI
Trigger: TATTGTGAGAACGCTACTGCAGTAGTTGATGTTGTG...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GATATACAGATAGATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCCGCAGTATTTGGAGATaGCTCTGTTCTTTCATACTG +
Preference number: 4 (lower is better)
Translates to: DIQIDNLCWPRSCSLKMLRSIWR*LCSFIL
Trigger: CAGTATGAAAGAACAGAGCCATCTCCAAATACTGCG...GAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATCTATCTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp GATATACAGATAGATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCAACAACCGCAGTATTTaGAGATGGCTCTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DIQIDNLCWPRSCSLKMLNNRSI*RWLCSF
Trigger: GAAAGAACAGAGCCATCTCCAAATACTGCGGTTGTT...GAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATCTATCTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp AATGAAAGTAATGTAGTCTTTGTAAGAGCAAAGTGGGCCTGCCAGGATCCCCATGTAATGTTGTACAGATaGTCAAGTGAAATAACAAGG +
Preference number: 4 (lower is better)
Translates to: NESNVVFVRAKWACQDPHVMLYR*SSEITR
Trigger: CCTTGTTATTTCACTTGACCATCTGTACAACATTAC...ATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAAGACTACATTACTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTTTAAGAGATTCCTTCTaGAAGCGCTCTTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVLRDSF*KRSLTA
Trigger: TGCAGTCAAAGAGCGCTTCCAGAAGGAATCTCTTAA...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAAACCATGACAATAGTGTaGACTGTGAATGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQTMTIV*TVNVPK
Trigger: CTTGGGCACATTCACAGTCCACACTATTGTCATGGT...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp GATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCATCAATGTTGTACCAGATTGTGTGATATaGTATGATCTGCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: DNLCWPRSCSLKMLINVVPDCVI*YDLPSM
Trigger: CATTGAAGGCAGATCATACCATATCACACAATCTGG...TACAACATTGATGAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAAAACAACCGCAGTATTTaGAGATGGCTCTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQNNRSI*RWLCSF
Trigger: GAAAGAACAGAGCCATCTCCAAATACTGCGGTTGTT...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTATAGATAATCTTTGTTaGCCACGAAGCTGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVIDNLC*PRSCSL
Trigger: CAAGCTACAGCTTCGTGGCCAACAAAGATTATCTAT...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAAGTAAATACTAAATTCTaGCTGCTGGAGTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQVNTKF*LLELGL
Trigger: GAGACCCAACTCCAGCAGCCAGAATTTAGTATTTAC...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAGTAATGTTGTACAGATaGTCAAGTGAAATAACAAGG +
Preference number: 4 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIVMLYR*SSEITR
Trigger: CCTTGTTATTTCACTTGACCATCTGTACAACATTAC...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp ACCTACCTAGCGATTTCTCTTTCAAAACCTTTGAGCAACCTACCAGTATTATTTAGCCAAAGAGCTGTCTaGATATTCCAATTATCAAGA +
Preference number: 4 (lower is better)
Translates to: TYLAISLSKPLSNLPVLFSQRAV*IFQLSR
Trigger: TCTTGATAATTGGAATATTCAGACAGCTCTTTGGCT...AAATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGAAATCGCTAGGTAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR TCA 90 bp ACCTACCTAGCGATTTCTCTTTCAAAACCTTTGAGCAACCTACCAGTATTATTTTTGGATTGTGAGAGCTaGATGTTTTCATGTGTATTC +
Preference number: 4 (lower is better)
Translates to: TYLAISLSKPLSNLPVLFLDCES*MFSCVF
Trigger: GAATACACATGAAAACATTCAGCTCTCACAATCCAA...AAATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGAAATCGCTAGGTAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR GCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAACATAAGCCAGATGGTTaGCTTGTCTTTAACTTCATT +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQHKPDG*LVFNFI
Trigger: AATGAAGTTAAAGACAAGGCAACCATCTGGCTTATG...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp ACCTACCTAGCGATTTCTCTTTCAAAACCTTTGAGCAACCTACCAGTATTATTTAATAGTATTTGGGTCTaGCAGCCAAAAGAGAGATAT +
Preference number: 4 (lower is better)
Translates to: TYLAISLSKPLSNLPVLFNSIWV*QPKERY
Trigger: ATATCTCTCTTTTGGCTGCCAGACCCAAATACTATT...AAATAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGAAATCGCTAGGTAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CCA 90 bp TGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATAGATAATATGCAAAATAGTATTTaGGTCTGGCAGCCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CKIVFGSGSQKRDIQIDNMQNSI*VWQPKE
Trigger: CTCTTTTGGCTGCCAGACCCAAATACTATTTTGCAT...ATTATCTATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CCA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAAATAAAAGTGACAAGATaGACAAGACTGGTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQIKVTR*TRLVWN
Trigger: GTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTAT...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
3UTR CAA 72 bp GTTGTAATCAGAGTTTCTATAAATAGATTTGACTACTaGGTGTTGCAGAAAAACACTGTAGAGACCCTCTAT +
Preference number: 4 (lower is better)
Translates to: VVIRVSINRFDY*VLQKNTVETLY
Trigger: ATAGAGGGTCTCTACAGTGTTTTTCTGCAACACCAAGTAGTCAAATCTATTTATAGAAACTCTGATTACAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp TACGCAACATACATTCAGCAACAGGGCACGCGTGTGACCCTACGGACAAGTGCTGGCAGCTGCACGGCGTaGCTGAGGGGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YATYIQQQGTRVTLRTSAGSCTA*LRGCSR
Trigger: CCTGCTGCAGCCCCTCAGCAACGCCGTGCAGCTGCC...AGCACTTGTCCGTAGGGTCACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp AAGCTTGGCATGCGCCTTACAGCTAAATCCCTCTGTGAGGAAGTCAGTTCTTCAGGCAGCTGCACGGCGTaGCTGAGGGGCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KLGMRLTAKSLCEEVSSSGSCTA*LRGCSR
Trigger: CCTGCTGCAGCCCCTCAGCAACGCCGTGCAGCTGCC...TGAAGAACTGACTTCCTCACAGAGGGATTTAGCTGTAAGGCGCATGCCAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS TCA 90 bp CGTGTTTTCTCCTCACAGGAACTGGGCATGGAGCCTAGCCCGTGGTaGGCGCTCAGCAAACATGCACGCAGTACACACCTCGCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: RVFSSQELGMEPSPW*ALSKHARSTHLASS
Trigger: ACTAGAAGCGAGGTGTGTACTGCGTGCATGTTTGCTGAGCGCTCACCACGGGCTAGGCTCCATGCCCAGTTCCTGTGAGGAGAAAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486315.1
ENST00000494760.1
CDS CCA 90 bp TGCCGGGCACATAGAAACGTGTTTTCTCCTCACAGGAACTGGGCATaGAGCCTAGCCCGTGGTGAGCGCTCAGCAAACATGCACGCAGTA +
Preference number: 5 (lower is better)
Translates to: CRAHRNVFSPHRNWA*SLARGERSANMHAV
Trigger: TACTGCGTGCATGTTTGCTGAGCGCTCACCACGGGCTAGGCTCCATGCCCAGTTCCTGTGAGGAGAAAACACGTTTCTATGTGCCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486315.1
ENST00000494760.1
CDS-3UTR CAA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGCACACTACAAAGTaGACCTGGTCGATGGGCAGC +
Preference number: 5 (lower is better)
Translates to: AWPTETWHGRACFTPFPIWHTTK*TWSMGS
Trigger: GCTGCCCATCGACCAGGTCAACTTTGTAGTGTGCCA...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACACGGGGATTCACCACGTaGGCCAGGCTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TETWHGRACFTPFPIWCTRGFTT*ARLVSN
Trigger: GTTGGAGACCAGCCTGGCCAACGTGGTGAATCCCCG...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATATAGACTCGAGTAACTaGGCACACTGTGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNIDSSN*AHCEVS
Trigger: GGATACCTCACAGTGTGCCAAGTTACTCGAGTCTAT...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCAATACTCCAGTAAGCTaGGCATGCGCCTTACAGCTA +
Preference number: 5 (lower is better)
Translates to: AWPTETWHGRACFTPFPINTPVS*ACALQL
Trigger: TAGCTGTAAGGCGCATGCCAAGCTTACTGGAGTATT...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCCACCTCTTCAGTGCCTaGGGATACGCAACATACATT +
Preference number: 5 (lower is better)
Translates to: AWPTETWHGRACFTPFPIHLFSA*GYATYI
Trigger: AATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTG...GATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATGACACATGCCCATTTTaGCTGAGACCTCAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNDTCPF*LRPQKL
Trigger: CAGCTTTTGAGGTCTCAGCAAAAATGGGCATGTGTC...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp AACAGCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTGGACAAGTGCTGAGGTaGGGAGTGCCCACTGAAATA +
Preference number: 5 (lower is better)
Translates to: NSPQSLPDHCFSDECLEAGQVLR*GVPTEI
Trigger: TATTTCAGTGGGCACTCCCAACCTCAGCACTTGTCC...AGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR CAA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGCACCTCTTCAGTGCCTaGGGATACGCAACATACATT +
Preference number: 5 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLHLFSA*GYATYI
Trigger: AATGTATGTTGCGTATCCCAAGGCACTGAAGAGGTG...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp GTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGAACAACCGCAGTATTaGGAGATGGCTCTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: VAHGDMAWEGLFHSISNLEQPQY*EMALFF
Trigger: AAAGAACAGAGCCATCTCCAAATACTGCGGTTGTTC...CAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp GGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCCACGAAGCTGTAGCTaGAAAATGCTCATCAATGTT +
Preference number: 5 (lower is better)
Translates to: GVAHGDMAWEGLFHSISNPRSCS*KMLINV
Trigger: AACATTGATGAGCATTTTCAAGCTACAGCTTCGTGG...ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCAGCTACCTATAATTaGGCGTCCATTACTGTTTAC +
Preference number: 5 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQSATYN*ASITVY
Trigger: GTAAACAGTAATGGACGCCAAATTATAGGTAGCTGA...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp AACAGCCCTCAGAGCCTTCCCGATCACTGCTTTAGTGATGAATGTCTCGAGGCTGAACAACCGCAGTATTaGGAGATGGCTCTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: NSPQSLPDHCFSDECLEAEQPQY*EMALFF
Trigger: AAAGAACAGAGCCATCTCCAAATACTGCGGTTGTTC...AGCCTCGAGACATTCATCACTAAAGCAGTGATCGGGAAGGCTCTGAGGGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471753.5
CDS-3UTR CAA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGACTCCACAGGTAATGTaGTACAGATGGTCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LFSALGYATYIQQQGTRVTPQVM*YRWSSE
Trigger: TTCACTTGACCATCTGTACAACATTACCTGTGGAGT...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp AGGCGTGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAAAAATGCTCATCAATGTaGTACTCCACAGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: RRGPRRHGMGGLVSLHFQKCSSM*YSTGNV
Trigger: AACATTACCTGTGGAGTACAACATTGATGAGCATTT...TTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCACGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp CTCTTCAGTGCCTTGGGATACGCAACATACATTCAGCAACAGGGCACGCGTGTGCCACGAAGCTGTAGCTaGAAAATGCTCATCAATGTT +
Preference number: 5 (lower is better)
Translates to: LFSALGYATYIQQQGTRVPRSCS*KMLINV
Trigger: AACATTGATGAGCATTTTCAAGCTACAGCTTCGTGG...CACACGCGTGCCCTGTTGCTGAATGTATGTTGCGTATCCCAAGGCACTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTCAAAAGTGGTATGTTaGGAAATCCTGTGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGSKVVC*EILCVS
Trigger: TGACACACACAGGATTTCCAAACATACCACTTTTGA...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS CCA 90 bp GTATACCCCGTGCCAAATGGCAGAGAGAATGAACGTCTGGATAGTTaGACTGAAGGAGGTTCGTTCATAACACACCCTTTTGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VYPVPNGRENERLDS*TEGGSFITHPFEPK
Trigger: CTTTGGCTCAAAAGGGTGTGTTATGAACGAACCTCCTTCAGTCCAACTATCCAGACGTTCATTCTCTCTGCCATTTGGCACGGGGTATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305997.8
ENST00000486484.5
ENST00000494760.1
CDS-3UTR CAA 90 bp TGGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTCTCGAGGCTATTTCTaGATTCTGATTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: WPTETWHGRACFTPFPIWSRGYF*ILIANI
Trigger: AATGTTTGCAATCAGAATCAAGAAATAGCCTCGAGA...CCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAAATGGCATGGGAGGGCTaGTTTCACTCCATTTCCAAT +
Preference number: 5 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKMAWEG*FHSISN
Trigger: ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCAT...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp GGCCCACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTTCTCTATCATCCAGATaGACACGATTATTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: GPRRHGMGGLVSLHFQSGSLSSR*TRLFFH
Trigger: GTGGAAAAATAATCGTGTCAATCTGGATGATAGAGA...ACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGTGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GTGCTGAGGTTGGGAGTGCCCACTGAAATATGGAAATATTCTTACATAAGGCGTTTATGGCTGAGGAACTaGGGGTCTACAGGACAGGTG +
Preference number: 5 (lower is better)
Translates to: VLRLGVPTEIWKYSYIRRLWLRN*GSTGQV
Trigger: CACCTGTCCTGTAGACCCCAAGTTCCTCAGCCATAA...ACGCCTTATGTAAGAATATTTCCATATTTCAGTGGGCACTCCCAACCTCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAAACTCCACAGGTAATGTaGTACAGATGGTCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKTPQVM*YRWSSE
Trigger: TTCACTTGACCATCTGTACAACATTACCTGTGGAGT...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACATATCATGACAACCTTTaGAAATGTCAGGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: TETWHGRACFTPFPIWCTYHDNL*KCQGFE
Trigger: CTCAAAGCCCTGACATTTCAAAAGGTTGTCATGATA...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GCGTCCATGCAAAATAGTATTTGGGTCTGGCAGCCAAAAGAGAGATATACAGATATAGACTCGAGTAACTaGGCACACTGTGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: ASMQNSIWVWQPKERYTDIDSSN*AHCEVS
Trigger: GGATACCTCACAGTGTGCCAAGTTACTCGAGTCTAT...ATCTGTATATCTCTCTTTTGGCTGCCAGACCCAAATACTATTTTGCATGGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CAA 90 bp ACGGAGACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGTCACCAGACATTTTaGAAGCCAAATAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: TETWHGRACFTPFPIWCTGHQTF*KPNKSS
Trigger: AGAAGATTTATTTGGCTTCAAAAATGTCTGGTGACC...TGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTCTCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTTTCTGGCTGCTGGAGTaGGGTCTCTCCTCATGTTTG +
Preference number: 5 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVFWLLE*GLSSCL
Trigger: CAAACATGAGGAGAGACCCAACTCCAGCAGCCAGAA...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp TACAGTTGTAACTCAAATACTCCAGTAAGCTTGGCATGCGCCTTACAGCTAAATAATACTCCAGTAAGCTaGGCATGCGCCTTACAGCTA +
Preference number: 5 (lower is better)
Translates to: YSCNSNTPVSLACALQLNNTPVS*ACALQL
Trigger: TAGCTGTAAGGCGCATGCCAAGCTTACTGGAGTATT...ATTTAGCTGTAAGGCGCATGCCAAGCTTACTGGAGTATTTGAGTTACAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CAA 90 bp AATGAAAGTAATGTAGTCTTTGTAAGAGCAAAGTGGGCCTGCCAGGATCCCCATACTCCACAGGTAATGTaGTACAGATGGTCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: NESNVVFVRAKWACQDPHTPQVM*YRWSSE
Trigger: TTCACTTGACCATCTGTACAACATTACCTGTGGAGT...ATGGGGATCCTGGCAGGCCCACTTTGCTCTTACAAAGACTACATTACTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CAA 90 bp GTAAGAGCAAAGTGGGCCTGCCAGGATCCCCATGAAGTTACAGTTGTAACTCAAAAATGCTCATCAATGTaGTACTCCACAGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: VRAKWACQDPHEVTVVTQKCSSM*YSTGNV
Trigger: AACATTACCTGTGGAGTACAACATTGATGAGCATTT...TTGAGTTACAACTGTAACTTCATGGGGATCCTGGCAGGCCCACTTTGCTCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CAA 90 bp GACATGGCATGGGAGGGCTTGTTTCACTCCATTTCCAATCTGGTGTACAGGAAATCTCGAGGCTATTTCTaGATTCTGATTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: DMAWEGLFHSISNLVYRKSRGYF*ILIANI
Trigger: AATGTTTGCAATCAGAATCAAGAAATAGCCTCGAGA...TTTCCTGTACACCAGATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305997.8
ENST00000471753.5
CDS-3UTR CAA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAATGGCATGGGAGGGCTaGTTTCACTCCATTTCCAAT +
Preference number: 5 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIMAWEG*FHSISN
Trigger: ATTGGAAATGGAGTGAAACAAGCCCTCCCATGCCAT...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp TACAGTTGTAACTCAAATACTCCAGTAAGCTTGGCATGCGCCTTACAGCTAAATGAACAACCGCAGTATTaGGAGATGGCTCTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: YSCNSNTPVSLACALQLNEQPQY*EMALFF
Trigger: AAAGAACAGAGCCATCTCCAAATACTGCGGTTGTTC...ATTTAGCTGTAAGGCGCATGCCAAGCTTACTGGAGTATTTGAGTTACAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CAA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTAATGTGCCCAAGTCCTaGAATCCTACAGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVNVPKS*NPTDLA
Trigger: AGCAAGGTCTGTAGGATTCAAGGACTTGGGCACATT...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp TCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTCAATCTTTTGCTTCAGCATaGGGAGCACGCGTTCATCAA +
Preference number: 5 (lower is better)
Translates to: SHKSDKMDKTGLEHICVQSFASA*GARVHQ
Trigger: TTGATGAACGCGTGCTCCCAATGCTGAAGCAAAAGA...TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAGGCAAATGTACTTCATaGATAAATCTGTGTGCGCAG +
Preference number: 5 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIGKCTS*INLCAQ
Trigger: CTGCGCACACAGATTTATCAATGAAGTACATTTGCC...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp GATATACAGATAGATAATCTTTGTTGGCCACGAAGCTGTAGCTTGAAAATGCTCCCACGAAGCTGTAGCTaGAAAATGCTCATCAATGTT +
Preference number: 5 (lower is better)
Translates to: DIQIDNLCWPRSCSLKMLPRSCS*KMLINV
Trigger: AACATTGATGAGCATTTTCAAGCTACAGCTTCGTGG...GAGCATTTTCAAGCTACAGCTTCGTGGCCAACAAAGATTATCTATCTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS-3UTR CAA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATAAAATGCTCATCAATGTaGTACTCCACAGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: STTSHSLNAHWVKCSSFIKCSSM*YSTGNV
Trigger: AACATTACCTGTGGAGTACAACATTGATGAGCATTT...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp TCAACGACCAGCCACTCATTAAATGCACACTGGGTTAAATGCAGCAGTTTTATATCTCTTTCAAAACCTTaGAGCAACCTACCAGTATTA +
Preference number: 5 (lower is better)
Translates to: STTSHSLNAHWVKCSSFISLSKP*SNLPVL
Trigger: TAATACTGGTAGGTTGCTCAAAGGTTTTGAAAGAGA...TATAAAACTGCTGCATTTAACCCAGTGTGCATTTAATGAGTGGCTGGTCGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS-3UTR CAA 90 bp CAGTCACATAAAAGTGACAAGATGGACAAGACTGGTTTGGAACACATTTGTGTTATGGACAAGACTGGTTaGGAACACATTTGTGTTCAA +
Preference number: 5 (lower is better)
Translates to: QSHKSDKMDKTGLEHICVMDKTG*EHICVQ
Trigger: TTGAACACAAATGTGTTCCAAACCAGTCTTGTCCAT...AACACAAATGTGTTCCAAACCAGTCTTGTCCATCTTGTCACTTTTATGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305997.8
CDS TCA 72 bp TCCTCACAGGAACTGGGCATGGAGCCTAGCCCGTGGTaGGCGCTCAGCAAACATGCACGCAGTACACACCTC +
Preference number: 6 (lower is better)
Translates to: SSQELGMEPSPW*ALSKHARSTHL
Trigger: GAGGTGTGTACTGCGTGCATGTTTGCTGAGCGCTCACCACGGGCTAGGCTCCATGCCCAGTTCCTGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486315.1
ENST00000494760.1
CDS CCA 72 bp CGGGCACATAGAAACGTGTTTTCTCCTCACAGGAACTaGGCATGGAGCCTAGCCCGTGGTGAGCGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RAHRNVFSPHRN*AWSLARGERSA
Trigger: TGCTGAGCGCTCACCACGGGCTAGGCTCCATGCCCAGTTCCTGTGAGGAGAAAACACGTTTCTATGTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486315.1
ENST00000494760.1
CDS CCA 72 bp GTGCCAAATGGCAGAGAGAATGAACGTCTGGATAGTTaGACTGAAGGAGGTTCGTTCATAACACACCCTTTT +
Preference number: 6 (lower is better)
Translates to: VPNGRENERLDS*TEGGSFITHPF
Trigger: AAAAGGGTGTGTTATGAACGAACCTCCTTCAGTCCAACTATCCAGACGTTCATTCTCTCTGCCATTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305997.8
ENST00000486484.5
ENST00000494760.1
CDS CAA 90 bp ATCAGCAGAATATTGTCCATAGTCAAAGATATAGACTCGAGTAACTaGGCACACTGTGAGGTATCCCAGAGCAAACACAAAGCAGTAACT +
Preference number: 6 (lower is better)
Translates to: ISRILSIVKDIDSSN*AHCEVSQSKHKAVT
Trigger: AGTTACTGCTTTGTGTTTGCTCTGGGATACCTCACAGTGTGCCAAGTTACTCGAGTCTATATCTTTGACTATGGACAATATTCTGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477073.5
CDS CAA 90 bp ATCAGCAGAATATTGTCCATAGTCAAAGATATAGACTCGAGTAACTaGGCACACTGTGAGGTATCCCAGAGCAAACACAAAGCAGTAATT +
Preference number: 6 (lower is better)
Translates to: ISRILSIVKDIDSSN*AHCEVSQSKHKAVI
Trigger: AATTACTGCTTTGTGTTTGCTCTGGGATACCTCACAGTGTGCCAAGTTACTCGAGTCTATATCTTTGACTATGGACAATATTCTGCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305997.8
ENST00000460786.1
ENST00000462696.1
ENST00000474341.5
ENST00000486484.5
CDS CAA 72 bp ATATTGTCCATAGTCAAAGATATAGACTCGAGTAACTaGGCACACTGTGAGGTATCCCAGAGCAAACACAAA +
Preference number: 6 (lower is better)
Translates to: ILSIVKDIDSSN*AHCEVSQSKHK
Trigger: TTTGTGTTTGCTCTGGGATACCTCACAGTGTGCCAAGTTACTCGAGTCTATATCTTTGACTATGGACAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305997.8
ENST00000460786.1
ENST00000462696.1
ENST00000474341.5
ENST00000477073.5
ENST00000486484.5