RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000204406

Ensembl transcript IDs: ENST00000407073.5, ENST00000416015.2, ENST00000470063.5, ENST00000473478.5, ENST00000478190.3, ENST00000478804.3, ENST00000488372.5, ENST00000496158.5, ENST00000496893.3, ENST00000627651.2, ENST00000628572.2, ENST00000629878.2, ENST00000630352.1, ENST00000635796.1, ENST00000636620.1, ENST00000637159.1, ENST00000637242.1, ENST00000637308.1, ENST00000637445.1, ENST00000637997.1, ENST00000638043.2, ENST00000638090.1, ENST00000638130.1, ENST00000642680.2

Found 1555 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTTTGAGGTGCTGAGCCTGCTATTGGAGAATCTCCTAGCAGCCTaGGTGGCAGACTGTTGTGTGAGCCCCAGGCTAGAGGACGAGGCA +
Preference number: 1 (lower is better)
Translates to: QFEVLSLLLENLLAA*VADCCVSPRLEDEA
Trigger: TGCCTCGTCCTCTAGCCTGGGGCTCACACAACAGTCTGCCACTCAGGCTGCTAGGAGATTCTCCAATAGCAGGCTCAGCACCTCAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR CCA 90 bp AGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAG +
Preference number: 1 (lower is better)
Translates to: SGVVSVIWRSSSSWV*GVSFVCHPVGFGVQ
Trigger: CTGTACACCAAATCCCACAGGGTGACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR TCA 90 bp CCCTTTAGAAATCTGCAAAGTTGCAATTTCCTAGACACCCGAAATTaGGTCCAGTGCTTCCAGGCAAGGTTCATTCCAAACAGACAATAT +
Preference number: 1 (lower is better)
Translates to: PFRNLQSCNFLDTRN*VQCFQARFIPNRQY
Trigger: ATATTGTCTGTTTGGAATGAACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTTTGCAGATTTCTAAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR CCA 90 bp CATTTACCTGAATACAAACAAAAGCTAGGGAGATGGCTTTTATATTaGCATAGACCAAGGACATGTCTCACAAACCAGGAAACCCTGCCT +
Preference number: 1 (lower is better)
Translates to: HLPEYKQKLGRWLLY*HRPRTCLTNQETLP
Trigger: AGGCAGGGTTTCCTGGTTTGTGAGACATGTCCTTGGTCTATGCCAATATAAAAGCCATCTCCCTAGCTTTTGTTTGTATTCAGGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR TCA 90 bp TGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATaGATAGCAGCTTCTAAATGGTTATTTAGCTTTCCACTTTTTCTG +
Preference number: 1 (lower is better)
Translates to: WCTVPDILSSSLMAS*IAASKWLFSFPLFL
Trigger: CAGAAAAAGTGGAAAGCTAAATAACCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
3UTR CCA 90 bp CTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTaGAGTCCAATGGTTATAAAACCAAGTGAAAGTCGAACAATATTC +
Preference number: 1 (lower is better)
Translates to: LTNQETLPRMAYFAV*SPMVIKPSESRTIF
Trigger: GAATATTGTTCGACTTTCACTTGGTTTTATAACCATTGGACTCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR TCA 90 bp CCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCTCAATaGGTCATGAAGAATCCTAATTTCAAATCCAAAGAATCCAAAGTG +
Preference number: 1 (lower is better)
Translates to: PSPLHFMLQKLVRPQ*VMKNPNFKSKESKV
Trigger: CACTTTGGATTCTTTGGATTTGAAATTAGGATTCTTCATGACTCATTGAGGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
3UTR GCA 90 bp AGGAAAACGCTTTTACTATCAGCAACAAAGACATGTGGGTTAGAATaGTTCTCCAGCATGACGGTATTATACCTACACACTAGCTTATTA +
Preference number: 1 (lower is better)
Translates to: RKTLLLSATKTCGLE*FSSMTVLYLHTSLL
Trigger: TAATAAGCTAGTGTGTAGGTATAATACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAAAAGCGTTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR CCA 90 bp AATGCATATATGCTTGTGACTTGCAAGGGAACACTGCAAACTGCATaGAAGATTACCAAAGTTAACAACAATGTGCTATCATGGTCTAAA +
Preference number: 1 (lower is better)
Translates to: NAYMLVTCKGTLQTA*KITKVNNNVLSWSK
Trigger: TTTAGACCATGATAGCACATTGTTGTTAACTTTGGTAATCTTCCATGCAGTTTGCAGTGTTCCCTTGCAAGTCACAAGCATATATGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR TCA 90 bp AGCAGGATTTCCCATGCTCGAGTTGTTTATTGCTTTTTGGCTCACTaGTTTAATATTCACTTCTGGGTTGTTTACACATATGAATTACTA +
Preference number: 1 (lower is better)
Translates to: SRISHARVVYCFLAH*FNIHFWVVYTYELL
Trigger: TAGTAATTCATATGTGTAAACAACCCAGAAGTGAATATTAAATCAGTGAGCCAAAAAGCAATAAACAACTCGAGCATGGGAAATCCTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAGGTGGCATGCTCTGTaGTGTGGCCCCAAGAAACCA +
Preference number: 2 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGRWHAL*CGPKKP
Trigger: TGGTTTCTTGGGGCCACAGCACAGAGCATGCCACCT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATCTGAGCACCAGCGGTaGTGCAGTCAGTATAAGCTA +
Preference number: 2 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGSEHQR*CSQYKL
Trigger: TAGCTTATACTGACTGCACCACCGCTGGTGCTCAGA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCCCAGGGTAGCCAGTTaGATTCCATCAGGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMPRVAS*IPSGLG
Trigger: CCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTAGACACCCGAAATTaGGTCCAGTGCTTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLDTRN*VQCFQA
Trigger: TGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR TCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGGCAGTTTGAGGTGCTaGGCCTGCTATTGGAGAATC +
Preference number: 2 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMGSLRC*ACYWRI
Trigger: GATTCTCCAATAGCAGGCTCAGCACCTCAAACTGCC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAACCAACTTAAGGAATaGCCTTGGTCTCCATTTTCC +
Preference number: 2 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGNQLKE*PWSPFS
Trigger: GGAAAATGGAGACCAAGGTCATTCCTTAAGTTGGTT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAACCTCTGATAATGGTTaGAAAGTGGGGTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGTSDNG*KVGFLP
Trigger: AGGCAAAAACCCCACTTTGCAACCATTATCAGAGGT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCACCCTGTGGGATTTaGTGTACAGTCCCAGACATT +
Preference number: 2 (lower is better)
Translates to: PCGIWCTVPDILSSSLMASPCGI*CTVPDI
Trigger: AATGTCTGGGACTGTACACCAAATCCCACAGGGTGA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAGAAATCTGCAAAGTTaGAATTTCCTAGACACCCGA +
Preference number: 2 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGRNLQS*NFLDTR
Trigger: TCGGGTGTCTAGGAAATTGCAACTTTGCAGATTTCT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCTTAATTTAGACCTGTaGGCCCTCATCCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLNLDL*ALIPLE
Trigger: TTCTAAAGGGATGAGGGCTCACAGGTCTAAATTAAG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGAAGGGTTCCTACTTTaGGGTCATGAAGCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: TTLKSLESCITPFGHKWAEGFLL*GHEAQG
Trigger: ACCCTGGGCTTCATGACCTCAAAGTAGGAACCCTTC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 2 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHESLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGACCTCTGATAATGGTTaGAAAGTGGGGTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMTSDNG*KVGFLP
Trigger: AGGCAAAAACCCCACTTTGCAACCATTATCAGAGGT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTCTTGTGAGACCTCAATaGGTCATGAAGAATCCTAAT +
Preference number: 2 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLLVRPQ*VMKNPN
Trigger: ATTAGGATTCTTCATGACTCATTGAGGTCTCACAAG...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
3UTR-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTGGAAGCCTAAACTTTaGTTAACTGCCTGGAAGATA +
Preference number: 2 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMWKPKL*LTAWKI
Trigger: TATCTTCCAGGCAGTTAAGCAAAGTTTAGGCTTCCA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 2 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 2 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTCACCCTGTGGGATTTaGTGTACAGTCCCAGACATT +
Preference number: 2 (lower is better)
Translates to: PVVVVAICHSLNIDITVASPCGI*CTVPDI
Trigger: AATGTCTGGGACTGTACACCAAATCCCACAGGGTGA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAGGTGGTGGGCAGTTTaGGGTGCTGAGCCTGCTATT +
Preference number: 2 (lower is better)
Translates to: LCKVYNGREAQTELAQNTRWWAV*GAEPAI
Trigger: AATAGCAGGCTCAGCACCTCAAACTGCCCACCACCT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 2 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSSSWV*GVSFVC
Trigger: ACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAATTACTTCATGTGACTaGATGAAGGAACTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TTLKSLESCITPFGHKWAITSCD*MKELGR
Trigger: CCTGCCCAGTTCCTTCATGCAGTCACATGAAGTAAT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACAAACCAGGAAACCCTaGCTCGTATGGCTTATTTTG +
Preference number: 2 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEQTRKP*LVWLIL
Trigger: CAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATCTGAGCACCAGCGGTaGTGCAGTCAGTATAAGCTA +
Preference number: 2 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQSEHQR*CSQYKL
Trigger: TAGCTTATACTGACTGCACCACCGCTGGTGCTCAGA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGCATGCTCTGTGCTGTaGCCCCAAGAAACCAACTTA +
Preference number: 2 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQACSVL*PQETNL
Trigger: TAAGTTGGTTTCTTGGGGCCACAGCACAGAGCATGC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGCTGGAAGCCCCCTATaGGATAAGTATACTGTTAGA +
Preference number: 2 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEAGSPL*DKYTVR
Trigger: TCTAACAGTATACTTATCCCATAGGGGGCTTCCAGC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 2 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACTCTATGGGCAAAATTaGAGTGCGAGTGACCAATTT +
Preference number: 2 (lower is better)
Translates to: TTLKSLESCITPFGHKWALYGQN*SASDQF
Trigger: AAATTGGTCACTCGCACTTCAATTTTGCCCATAGAG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 2 (lower is better)
Translates to: VVVVAICHSLNIDITVAISLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGAGTTACTGGAACTCTaGTACATGACAGGACTGAGG +
Preference number: 2 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQELLEL*YMTGLR
Trigger: CCTCAGTCCTGTCATGTAGCAGAGTTCCAGTAACTC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACTTGCAAGGGAACACTaGAAACTGCATGGAAGATTA +
Preference number: 2 (lower is better)
Translates to: TTLKSLESCITPFGHKWALAREH*KLHGRL
Trigger: TAATCTTCCATGCAGTTTGCAGTGTTCCCTTGCAAG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACAACTGAAGTCAGGCTaGAAGCCTAAACTTTGCTTA +
Preference number: 2 (lower is better)
Translates to: TTLKSLESCITPFGHKWAQLKSG*KPKLCL
Trigger: TAAGCAAAGTTTAGGCTTCCAGCCTGACTTCAGTTG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAGCAACAAAGACATGTaGGTTAGAATGCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: LTPPAVTVQVRCITKIHESNKDM*VRMLLQ
Trigger: CTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 2 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 2 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATCGTATGGCTTATTTTaGAGTTTGGAGTCCAATGGT +
Preference number: 2 (lower is better)
Translates to: LTPPAVTVQVRCITKIHESYGLF*SLESNG
Trigger: ACCATTGGACTCCAAACTGCAAAATAAGCCATACGA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 2 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 2 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAACACTGCAAACTGCATaGAAGATTACCAAAGTTAAC +
Preference number: 2 (lower is better)
Translates to: TTLKSLESCITPFGHKWATLQTA*KITKVN
Trigger: GTTAACTTTGGTAATCTTCCATGCAGTTTGCAGTGT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAGATGGCTTTTATATTaGCATAGACCAAGGACATGT +
Preference number: 2 (lower is better)
Translates to: LTPPAVTVQVRCITKIHERWLLY*HRPRTC
Trigger: ACATGTCCTTGGTCTATGCCAATATAAAAGCCATCT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 2 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 2 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 2 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAATCTGCTTCAACAGGTaGCTATCAAATGTTAACTAC +
Preference number: 2 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQICFNR*LSNVNY
Trigger: GTAGTTAACATTTGATAGCCACCTGTTGAAGCAGAT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR TCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTTCCTTAATGGTGGCTaGAGAGATACAATAGATTTG +
Preference number: 2 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFFLNGG*RDTIDL
Trigger: CAAATCTATTGTATCTCTTCAGCCACCATTAAGGAA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCCTTGTACTTTACAATaGCTCACAGTTTTAGGTTTG +
Preference number: 2 (lower is better)
Translates to: LCKVYNGREAQTELAQNTPCTLQ*LTVLGL
Trigger: CAAACCTAAAACTGTGAGCCATTGTAAAGTACAAGG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR TCA 72 bp GTGCTGAGCCTGCTATTGGAGAATCTCCTAGCAGCCTaGGTGGCAGACTGTTGTGTGAGCCCCAGGCTAGAG +
Preference number: 3 (lower is better)
Translates to: VLSLLLENLLAA*VADCCVSPRLE
Trigger: CTCTAGCCTGGGGCTCACACAACAGTCTGCCACTCAGGCTGCTAGGAGATTCTCCAATAGCAGGCTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGC +
Preference number: 3 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPRHPK*SPVLPG
Trigger: GCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGC +
Preference number: 3 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMPRHPK*SPVLPG
Trigger: GCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR CCA 72 bp GTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGTCACCCTGTGGGATTT +
Preference number: 3 (lower is better)
Translates to: VSVIWRSSSSWV*GVSFVCHPVGF
Trigger: AAATCCCACAGGGTGACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTGCAAAGTGGGGTTTTaGCCTCCATGTACGGAAATA +
Preference number: 3 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMCKVGF*PPCTEI
Trigger: TATTTCCGTACATGGAGGCAAAAACCCCACTTTGCA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTCACCCTGTGGGATTaGGTGTACAGTCCCAGACAT +
Preference number: 3 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVTLWD*VYSPRH
Trigger: ATGTCTGGGACTGTACACCAAATCCCACAGGGTGAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR-3UTR CAA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 3 (lower is better)
Translates to: LLTITIPSSFYAPEACETTVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
3UTR-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGGGCTCCACCCCTTGTaGATACGACATTTTGTTGAC +
Preference number: 3 (lower is better)
Translates to: PVVVVAICHSLNIDITVAGLHPL*IRHFVD
Trigger: GTCAACAAAATGTCGTATCAACAAGGGGTGGAGCCC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
3UTR-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGC +
Preference number: 3 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQPRHPK*SPVLPG
Trigger: GCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTCACCCTGTGGGATTaGGTGTACAGTCCCAGACAT +
Preference number: 3 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVTLWD*VYSPRH
Trigger: ATGTCTGGGACTGTACACCAAATCCCACAGGGTGAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR TCA 72 bp AATCTGCAAAGTTGCAATTTCCTAGACACCCGAAATTaGGTCCAGTGCTTCCAGGCAAGGTTCATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: NLQSCNFLDTRN*VQCFQARFIPN
Trigger: GTTTGGAATGAACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTTTGCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAATAGATCCCTTCTTTaGACAATCCATCAACTGAAG +
Preference number: 3 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMNRSLL*TIHQLK
Trigger: CTTCAGTTGATGGATTGTCAAAAGAAGGGATCTATT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 3 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETTVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
3UTR CCA 72 bp TCCCTTCTTTTGACAATCCATCAACTGAAGTCAGGCTaGAAGCCTAAACTTTGCTTAACTGCCTGGAAGATA +
Preference number: 3 (lower is better)
Translates to: SLLLTIHQLKSG*KPKLCLTAWKI
Trigger: TATCTTCCAGGCAGTTAAGCAAAGTTTAGGCTTCCAGCCTGACTTCAGTTGATGGATTGTCAAAAGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR CCA 72 bp CAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTaGAGTCCAATGGTTATAAAACCAAGTGAAAGTCGA +
Preference number: 3 (lower is better)
Translates to: QETLPRMAYFAV*SPMVIKPSESR
Trigger: TCGACTTTCACTTGGTTTTATAACCATTGGACTCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGGCTTATTTTGCAGTTaGGAGTCCAATGGTTATAAA +
Preference number: 3 (lower is better)
Translates to: LLSATKTCGLECFSSMTVGLFCS*ESNGYK
Trigger: TTTATAACCATTGGACTCCAAACTGCAAAATAAGCC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTTCTGAGGACTCTATaGCACAAAATACAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: LLSATKTCGLECFSSMTVFLRTL*HKIQVF
Trigger: AAAGACCTGTATTTTGTGCAATAGAGTCCTCAGAAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR GCA 72 bp CTTTTACTATCAGCAACAAAGACATGTGGGTTAGAATaGTTCTCCAGCATGACGGTATTATACCTACACACT +
Preference number: 3 (lower is better)
Translates to: LLLSATKTCGLE*FSSMTVLYLHT
Trigger: AGTGTGTAGGTATAATACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR CCA 72 bp GAATACAAACAAAAGCTAGGGAGATGGCTTTTATATTaGCATAGACCAAGGACATGTCTCACAAACCAGGAA +
Preference number: 3 (lower is better)
Translates to: EYKQKLGRWLLY*HRPRTCLTNQE
Trigger: TTCCTGGTTTGTGAGACATGTCCTTGGTCTATGCCAATATAAAAGCCATCTCCCTAGCTTTTGTTTGTATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR TCA 72 bp GTGTCGAGTTATCTAAAAAGAAATATGATGAGTGAGTaGAAAGCTGGAAGCCCCCTATGGGATAAGTATACT +
Preference number: 3 (lower is better)
Translates to: VSSYLKRNMMSE*KAGSPLWDKYT
Trigger: AGTATACTTATCCCATAGGGGGCTTCCAGCTTTTCACTCACTCATCATATTTCTTTTTAGATAACTCGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR CCA 72 bp CAACCAGTGAAATCATGGGCACAAACATACTTTACATaGTCTACTTATGTAAAGTATACAATGGGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: QPVKSWAQTYFT*STYVKYTMGGK
Trigger: CTTCCCTCCCATTGTATACTTTACATAAGTAGACCATGTAAAGTATGTTTGTGCCCATGATTTCACTGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 3 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
3UTR-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 3 (lower is better)
Translates to: LCKVYNGREAQTELAQNTFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
3UTR TCA 72 bp CTTCATTTTATGCTCCAGAAGCTTGTGAGACCTCAATaGGTCATGAAGAATCCTAATTTCAAATCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: LHFMLQKLVRPQ*VMKNPNFKSKE
Trigger: TTCTTTGGATTTGAAATTAGGATTCTTCATGACTCATTGAGGTCTCACAAGCTTCTGGAGCATAAAATGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
3UTR TCA 72 bp CCAAAGTTAACAACAATGTGCTATCATGGTCTAAAATaGAACATGAGTCACCTCGTAGGATATAAGAATCTT +
Preference number: 3 (lower is better)
Translates to: PKLTTMCYHGLK*NMSHLVGYKNL
Trigger: AAGATTCTTATATCCTACGAGGTGACTCATGTTTCATTTTAGACCATGATAGCACATTGTTGTTAACTTTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCCTGATGACGCTGGGCTaGGCAGGCCTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMALMTLG*AGLHGC
Trigger: GCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAG...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACCACTAGAAGTGGCCTaGGGTCCTACAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGPLEVA*GPTGGI
Trigger: GATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAGGTGGTGGGCAGTTTaGGGTGCTGAGCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGRWWAV*GAEPAI
Trigger: AATAGCAGGCTCAGCACCTCAAACTGCCCACCACCT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGGGGGAGGTGGGCCTTaGGGTGGTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVGGGGP*GGLWWN
Trigger: GTTCCACCACAAACCACCCCAAGGCCCACCTCCCCC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGGGGGAGGTGGGCCTTaGGGTGGTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASGGGGP*GGLWWN
Trigger: GTTCCACCACAAACCACCCCAAGGCCCACCTCCCCC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGGAGGAGGGGGAGGTaGGCCTTGGGGTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVWRRGR*ALGWFV
Trigger: CACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGTTTCGCTCCCCTCTaGGGCTTTGCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCFAPL*GFAPRP
Trigger: GGGACGGGGAGCAAAGCCCCAGAGGGGAGCGAAACA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGTTTCGCTCCCCTCTaGGGCTTTGCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCFAPL*GFAPRP
Trigger: GGGACGGGGAGCAAAGCCCCAGAGGGGAGCGAAACA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGCCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGCCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGGCAGGGTGGTTGGTaGCCGCTATGGCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVWQGGW*PLWLWR
Trigger: CCTCCATAGCCATAGCGGGCACCAACCACCCTGCCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGGTTGTGGTAGTGGTTaGCTGGGAGGAGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGGCGSG*LGGGCY
Trigger: ATAGCAACCTCCTCCCAGGCAACCACTACCACAACC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCTGGGCAGGCCTCCATaGCTGCCACGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLGRPP*LPRNGD
Trigger: ATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCCAG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGTGTTTCGCTCCCCTCTaGGGCTTTGCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMCFAPL*GFAPRP
Trigger: GGGACGGGGAGCAAAGCCCCAGAGGGGAGCGAAACA...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAGCCATTGCACAGGATaGCTGTACAGGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGSHCTG*LYRRTM
Trigger: CATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAGGCAAAGCAGTATTTaGGGCCCCACAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASRQSSI*GPTTRG
Trigger: ACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCCTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMALPMGS*LCSGFP
Trigger: TGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAG...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGGAATGGGGCTGATCTaGGTTGTACTGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGGMGLI*VVLLTA
Trigger: TGCAGTCAACAGTACAACTCAGATCAGCCCCATTCC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACAGCCGAGCCCCTCTTaGATTCCTCAGCCTACCATC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASQPSPS*IPQPTI
Trigger: GATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGTGCCTTCCCTGGAGTaGGCATGTCCCTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMVPSLE*ACPSLT
Trigger: CGTCAGAGAGGGACATGCGCACTCCAGGGAAGGCAC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407073.5
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCAGTCCCCATCATGTaGACGGGGGATGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPVPIM*TGDVTG
Trigger: TCCAGTGACATCCCCCGTGCACATGATGGGGACTGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTTCTCGGGCTCCACCCCTTGTTGATACGACATTTTGTTGACTATAACCATCCCTGGCAGGGTGGTTGGTaGCCGCTATGGCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGLHPLLIRHFVDYNHPWQGGW*PLWLWR
Trigger: CCTCCATAGCCATAGCGGGCACCAACCACCCTGCCA...GGGATGGTTATAGTCAACAAAATGTCGTATCAACAAGGGGTGGAGCCCGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGGCAGGGTGGTTGGTaGCCGCTATGGCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASWQGGW*PLWLWR
Trigger: CCTCCATAGCCATAGCGGGCACCAACCACCCTGCCA...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCCACTAGAAGTGGCCTaGGGTCCTACAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVPLEVA*GPTGGI
Trigger: GATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTGTCCTTGGAACGCCTaGAGATTCTGGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMACPWNA*RFWYPW
Trigger: CCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTACGGAAGCATCACCTaGGCCACCCACAACGAGGCC +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHYGSIT*ATHNEA
Trigger: GGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTA...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGAGGCAAAGCAGTATTTaGGGCCCCACAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMRQSSI*GPTTRG
Trigger: ACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCT...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAAAGCCATGCCCGACTaGCTGAGCATCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASKAMPD*LSIPQF
Trigger: GAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLPMGS*LCSGFP
Trigger: TGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTCAGCCGAGCCCCTCTTaGATTCCTCAGCCTACCATC +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLQPSPS*IPQPTI
Trigger: GATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTG...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGCTTGGGCTTGGTTCTaGAGCAAGGCTGCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASAWAWF*SKAAKS
Trigger: GCTCTTAGCAGCCTTGCTTCAGAACCAAGCCCAAGC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACGGGCTCCACCTGAGTaGAGGTATGAAGACCAAACC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASRAPPE*RYEDQT
Trigger: GGTTTGGTCTTCATACCTTCACTCAGGTGGAGCCCG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638043.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGCAGGCCTCCATGGCTaGCACGGAATGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASAGLHG*HGMEIS
Trigger: AGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGAGTTACTGGAACTCTaGTACATGACAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGELLEL*YMTGLR
Trigger: CCTCAGTCCTGTCATGTAGCAGAGTTCCAGTAACTC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAGCGGTGTTGGCCGATaGCGAGTTCAGGACACCTCC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVSGVGR*RVQDTS
Trigger: GGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGATCATCAGCTGCTGCTaGTGCTGGGGTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVIISCC*CWGLSA
Trigger: AGCAGAGAGACCCCAGCAGCAGCAGCAGCTGATGAT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTCTTCATCATCAGCTaGTGCTGCTGCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLFIIS*CCCWGL
Trigger: GAGACCCCAGCAGCAGCAGCAGCTGATGATGAAGAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAATGGCTGCCACGGAATaGAGATTTCTGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGMAATE*RFLSMF
Trigger: GAACATGGACAGAAATCTCCATTCCGTGGCAGCCAT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTGGGCAGGCCTCCATaGCTGCCACGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLGRPP*LPRNGD
Trigger: ATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCCAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTGATGACGCTGGGCTaGGCAGGCCTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLMTLG*AGLHGC
Trigger: GCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTGATGACGCTGGGCTaGGCAGGCCTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALMTLG*AGLHGC
Trigger: GCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCCACTAGAAGTGGCCTaGGGTCCTACAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHPLEVA*GPTGGI
Trigger: GATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGLLAVL*LLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTGCCCGCTATGGCTATaGAGGATGATGGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMACPLWL*RMMVLN
Trigger: GTTCAGGACCATCATCCTCCATAGCCATAGCGGGCA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTTGTGATGGCAGGGTaGTTGGTGCCCGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASFVMAG*LVPAMA
Trigger: AGCCATAGCGGGCACCAACCACCCTGCCATCACAAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGENHSQ*VADSAV
Trigger: CACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGTCCTTGGAACGCCTaGAGATTCTGGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCPWNA*RFWYPW
Trigger: CCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTACGGAAGCATCACCTaGGCCACCCACAACGAGGCC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVYGSIT*ATHNEA
Trigger: GGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGGAGTCCTATTCAGGTaGATAGGACTAGAATTGGGA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGGVLFR*IGLELG
Trigger: TCCCAATTCTAGTCCTATTCACCTGAATAGGACTCC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTGTTGGATGGAAAATaGAGTGCGTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLLDGK*SACSWP
Trigger: TGGCCAGGAGCACGCACTTCATTTTCCATCCAACAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCACCAATTGAGGCAGTaGAGGCACTCATGGCACTCA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVHQLRQ*RHSWHS
Trigger: TGAGTGCCATGAGTGCCTTCACTGCCTCAATTGGTG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATTGTTGGGCCTTTCATaGCAAGGACTACTGTGGATA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGLLGLS*QGLLWI
Trigger: TATCCACAGTAGTCCTTGTCATGAAAGGCCCAACAA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGAAGGGTTCCTACTTTaGGGTCATGAAGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVEGFLL*GHEAQG
Trigger: ACCCTGGGCTTCATGACCTCAAAGTAGGAACCCTTC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACTGAATCCAAGGTGTTaGAGGTTGGTTCATCTGATG +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGLNPRC*RLVHLM
Trigger: CATCAGATGAACCAACCTGCAACACCTTGGATTCAG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATGCCTTAACATCTTCTaGGGTTCTCTGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGCLNIF*GSLFHS
Trigger: GCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVSVHVH*CPISVG
Trigger: CCCGACAGAGATTGGGCAGCAGTGAACATGGACAGA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCAGGCCTCCATGGCTaGCACGGAATGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMAGLHG*HGMEIS
Trigger: AGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGC...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMAARPL*PSPVGR
Trigger: TCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGCAGTGGGTTTCCAGCTaGAGTGGTGACTATGACGCC +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMQWVSS*SGDYDA
Trigger: GGCGTCATAGTCACCACTGCAGCTGGAAACCCACTG...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGGCTGCATCGACAACTaGTTTGTAAATGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGGCIDN*FVNGIY
Trigger: GTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGAGGAACTTGGAGACTaGTCCTCTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASEELGD*SSRTRS
Trigger: AGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGAGGAACTTGGAGACTaGTCCTCTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVEELGD*SSRTRS
Trigger: AGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGCCTGGGAGGAGGTTaGTATGGAAACCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCLGGG*YGNLWM
Trigger: CATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGCCTGGGAGGAGGTTaGTATGGAAACCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCLGGG*YGNLWM
Trigger: CATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACTGATGACGCTGGGCTaGGCAGGCCTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWALMTLG*AGLHGC
Trigger: GCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGGGGGAGGTGGGCCTTaGGGTGGTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAGGGGP*GGLWWN
Trigger: GTTCCACCACAAACCACCCCAAGGCCCACCTCCCCC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATGGAGGAGGGGGAGGTaGGCCTTGGGGTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVWRRGR*ALGWFV
Trigger: CACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGGAGGAGGGGGAGGTaGGCCTTGGGGTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLWRRGR*ALGWFV
Trigger: CACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTTAGTGTTTGCATTGTaGCAGTGCACGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMALVFAL*QCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAATGGTGGTTGGGGACTaGACTGTTACTGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGMVVGD*TVTVNK
Trigger: TTTGTTCACAGTAACAGTCCAGTCCCCAACCACCAT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGCCCGCTATGGCTATaGAGGATGATGGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCPLWL*RMMVLN
Trigger: GTTCAGGACCATCATCCTCCATAGCCATAGCGGGCA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTTTTGTGATGGCAGGGTaGTTGGTGCCCGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLFVMAG*LVPAMA
Trigger: AGCCATAGCGGGCACCAACCACCCTGCCATCACAAA...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCAGATTCTGGTACCCCTaGAGAAGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMARFWYP*RSCCCC
Trigger: GCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTGGGCAAGGAATTGTaGACTGTCCTTGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLGKEL*TVLGTP
Trigger: AGGCGTTCCAAGGACAGTCCACAATTCCTTGCCCAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGTTTCGCTCCCCTCTaGGGCTTTGCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVACFAPL*GFAPRP
Trigger: GGGACGGGGAGCAAAGCCCCAGAGGGGAGCGAAACA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTTGTCTGTCACCCTGTaGGATTTGGTGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMALSVTL*DLVYSP
Trigger: GGGACTGTACACCAAATCCCACAGGGTGACAGACAA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGCTTGGCAAATGGTCTaGTGGGGCTGTCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVAWQMV*WGCHLC
Trigger: ACACAGATGACAGCCCCACCAGACCATTTGCCAAGC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGTGGTAGTGGTTGCCTaGGAGGAGGTTGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASVVVVA*EEVAME
Trigger: TTCCATAGCAACCTCCTCCCAGGCAACCACTACCAC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCCTTCCCTGGAGCTGTaGAGGATGACACAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVPSLEL*RMTQRV
Trigger: TACCCTTTGTGTCATCCTCCACAGCTCCAGGGAAGG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACTCCTCCGGGACTGGTaGGCACCAGAGAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVLLRDW*APEKDV
Trigger: CACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTCCTCCGGGACTGGTaGGCACCAGAGAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLLRDW*APEKDV
Trigger: CACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTCCTCCGGGACTGGTaGGCACCAGAGAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLLRDW*APEKDV
Trigger: CACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATTCATCATAGGTACCTaGGAGTGGACATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGFIIGT*EWTFEW
Trigger: CCATTCAAATGTCCACTCTCAGGTACCTATGATGAA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAAAAGCCATGCCCGACTaGCTGAGCATCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGKAMPD*LSIPQF
Trigger: GAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCAAAGCCATGCCCGACTaGCTGAGCATCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVKAMPD*LSIPQF
Trigger: GAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTT...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAAAAGCCATGCCCGACTaGCTGAGCATCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEKAMPD*LSIPQF
Trigger: GAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGCAGATGTTGTCTTTGTaGTGGCAGGGTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWQMLSL*WQGGWC
Trigger: GCACCAACCACCCTGCCATCACAAAGACAACATCTG...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGGAATGGGGCTGATCTaGGTTGTACTGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASGMGLI*VVLLTA
Trigger: TGCAGTCAACAGTACAACTCAGATCAGCCCCATTCC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAGGAAGTCAGTCCTTTaGTTTGGCCCCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASRKSVL*FGPRPS
Trigger: ACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSVHVHC*PISVGG
Trigger: ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGAC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR GCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMATTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHLQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGAARPL*PSPVGR
Trigger: TCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEAARPL*PSPVGR
Trigger: TCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGC...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGGCAGGGTGGTTGGTaGCCGCTATGGCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGWQGGW*PLWLWR
Trigger: CCTCCATAGCCATAGCGGGCACCAACCACCCTGCCA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAGTGGGTTTCCAGCTaGAGTGGTGACTATGACGCC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQWVSS*SGDYDA
Trigger: GGCGTCATAGTCACCACTGCAGCTGGAAACCCACTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTGGGTTTCCAGCTaGAGTGGTGACTATGACGCC +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVQWVSS*SGDYDA
Trigger: GGCGTCATAGTCACCACTGCAGCTGGAAACCCACTG...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCAACCTGCATTCCTTTaGTGGCTGCATCGACAACTG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVQPAFL*WLHRQL
Trigger: CAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGTGGTGATGACAACCTaGATTCCTTTGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASVVMTT*IPLLAA
Trigger: TGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCAC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTCTAGGACCAGGTCTTaGTTTGCAGTGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVSRTRS*FAVLSS
Trigger: GCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAGAGGAACTTGGAGACTaGTCCTCTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASEELGD*SSRTRS
Trigger: AGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTC...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGAGCACCAGCGGTGGTaGAGTCAGTATAAGCTATCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASEHQRW*SQYKLS
Trigger: AGATAGCTTATACTGACTGCACCACCGCTGGTGCTC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAGCGGTGTTGGCCGATaGCGAGTTCAGGACACCTCC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVASGVGR*RVQDTS
Trigger: GGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGLYKTH*EASAQF
Trigger: AAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTGGGCAGGCCTCCATaGCTGCCACGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALGRPP*LPRNGD
Trigger: ATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCCAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCCATCTCCATATATCTaGGAACCTGATGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVPSPYI*EPDDAG
Trigger: CCCAGCGTCATCAGGTTCCCAGATATATGGAGATGG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCATCAGGACTTCCAAGTaGGTCAGTCCTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAIRTSK*VSPWRD
Trigger: ATCTCTCCAAGGACTGACCCACTTGGAAGTCCTGAT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGCCTTGGGGTGGTTTGTaGTGGAACATTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMPWGGL*WNIARG
Trigger: ACCACGAGCAATGTTCCACCACAAACCACCCCAAGG...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGGGGGAGGTGGGCCTTaGGGTGGTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEGGGGP*GGLWWN
Trigger: GTTCCACCACAAACCACCCCAAGGCCCACCTCCCCC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTTGCCCTTCACCTGTTaGGAGAAGCATGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLPFTC*EKHVGS
Trigger: ACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTGCCCTTCACCTGTTaGGAGAAGCATGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLPFTC*EKHVGS
Trigger: ACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTAGTGTTTGCATTGTaGCAGTGCACGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLVFAL*QCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCTGCAAGATGGTGGTTaGGGACTGGACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLQDGG*GLDCYC
Trigger: ACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTGCCCGCTATGGCTATaGAGGATGATGGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWCPLWL*RMMVLN
Trigger: GTTCAGGACCATCATCCTCCATAGCCATAGCGGGCA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTTTGTGATGGCAGGGTaGTTGGTGCCCGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVFVMAG*LVPAMA
Trigger: AGCCATAGCGGGCACCAACCACCCTGCCATCACAAA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAAACGCCTGGAGATTCTaGTACCCCTGGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASNAWRF*YPWRSC
Trigger: GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTT...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAACGCCTGGAGATTCTaGTACCCCTGGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMNAWRF*YPWRSC
Trigger: GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTGTCCTTGGAACGCCTaGAGATTCTGGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVCPWNA*RFWYPW
Trigger: CCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGATTGTGGACTGTCCTTaGAACGCCTGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVIVDCP*NAWRFW
Trigger: CCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAAT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCTGGGCAAGGAATTGTaGACTGTCCTTGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHLGKEL*TVLGTP
Trigger: AGGCGTTCCAAGGACAGTCCACAATTCCTTGCCCAG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCGGGGTTATTGTTAGCTaGGCAAGGAATTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAGVIVS*ARNCGL
Trigger: CAGTCCACAATTCCTTGCCCAGCTAACAATAACCCC...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATGGAAGTGTAGTGTTTaGATTCTCAGGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGWKCSV*ILRKCC
Trigger: ACAGCACTTCCTGAGAATCCAAACACTACACTTCCA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCATGGCACTCAGAGCTaGAATGGGGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMHGTQS*NGADLS
Trigger: ACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTGTCTGTCACCCTGTaGGATTTGGTGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLSVTL*DLVYSP
Trigger: GGGACTGTACACCAAATCCCACAGGGTGACAGACAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTTGTCTGTCACCCTGTaGGATTTGGTGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLSVTL*DLVYSP
Trigger: GGGACTGTACACCAAATCCCACAGGGTGACAGACAA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGGAGAGCTGGGGAAGTaGCTGCTCCTGGGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGGELGK*LLLGVV
Trigger: CACTACACCCAGGAGCAGCCACTTCCCCAGCTCTCC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAACAAGCGTTGTGTGTaGCTCAGCAGTGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASNKRCV*LSSVME
Trigger: CTCCATTACACTGCTGAGTCACACACAACGCTTGTT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACAGGATTACTTCTTGTaGAAACATCAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGQDYFL*KHQDFQ
Trigger: TTGGAAGTCCTGATGTTTTCACAAGAAGTAATCCTG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGMITGF*FTGLLG
Trigger: TCCTAGTAAACCAGTGAATCAGAACCCTGTTATCAT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMACWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCCATGCCCGACTGACTaGGCATCCCACAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETPCPTD*ASHSSR
Trigger: GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAGATGTTGTCTTTGTaGTGGCAGGGTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQMLSL*WQGGWC
Trigger: GCACCAACCACCCTGCCATCACAAAGACAACATCTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCAGCCGAGCCCCTCTTaGATTCCTCAGCCTACCATC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGQPSPS*IPQPTI
Trigger: GATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCTTCATGTGACTGCATaGAGGAACTGGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMLHVTA*RNWAGN
Trigger: ATTGCCTGCCCAGTTCCTTCATGCAGTCACATGAAG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAATGTTTCTGCCATTaGCACCACTGCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQCFCH*HHCCPT
Trigger: GGTGGGACAGCAGTGGTGTCAATGGCAGAAACATTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGATCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGSVHVH*CPISVG
Trigger: CCCGACAGAGATTGGGCAGCAGTGAACATGGACAGA...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHESVHVH*CPISVG
Trigger: CCCGACAGAGATTGGGCAGCAGTGAACATGGACAGA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCAGTCCCCATCATGTaGACGGGGGATGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPVPIM*TGDVTG
Trigger: TCCAGTGACATCCCCCGTGCACATGATGGGGACTGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACCAGTCCCCATCATGTaGACGGGGGATGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVPVPIM*TGDVTG
Trigger: TCCAGTGACATCCCCCGTGCACATGATGGGGACTGG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCAGTCCCCATCATGTaGACGGGGGATGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPVPIM*TGDVTG
Trigger: TCCAGTGACATCCCCCGTGCACATGATGGGGACTGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTTTGCATTGTGGCAGTaGACGGCTTCCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVFALWQ*TASPLK
Trigger: TTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGGGTCAATCCTCGGTTaGAACTCACAAGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVGSILG*NSQGVS
Trigger: AGATACACCTTGTGAGTTGCAACCGAGGATTGACCC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGCAACCTGCATTCCTTTaGTGGCTGCATCGACAACTG +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMQPAFL*WLHRQL
Trigger: CAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTG...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTCTAGGACCAGGTCTTaGTTTGCAGTGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMSRTRS*FAVLSS
Trigger: GCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCTAGGACCAGGTCTTaGTTTGCAGTGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASSRTRS*FAVLSS
Trigger: GCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGA...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGAGGAACTTGGAGACTaGTCCTCTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVEELGD*SSRTRS
Trigger: AGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGAGTTACTGGAACTCTaGTACATGACAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVELLEL*YMTGLR
Trigger: CCTCAGTCCTGTCATGTAGCAGAGTTCCAGTAACTC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGGTTGTGGTAGTGGTTaGCTGGGAGGAGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVGCGSG*LGGGCY
Trigger: ATAGCAACCTCCTCCCAGGCAACCACTACCACAACC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCGAGAAGGTACTACTaGAGTTGCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPRRYY*SCICSS
Trigger: GGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGATCAGGACTTCCAAGTaGGTCAGTCCTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVIRTSK*VSPWRD
Trigger: ATCTCTCCAAGGACTGACCCACTTGGAAGTCCTGAT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAATCAGGACTTCCAAGTaGGTCAGTCCTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASIRTSK*VSPWRD
Trigger: ATCTCTCCAAGGACTGACCCACTTGGAAGTCCTGAT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGGGGGAGGTGGGCCTTaGGGTGGTTTGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIGGGGP*GGLWWN
Trigger: GTTCCACCACAAACCACCCCAAGGCCCACCTCCCCC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTGGAGGAGGGGGAGGTaGGCCTTGGGGTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETWRRGR*ALGWFV
Trigger: CACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCACTAGAAGTGGCCTaGGGTCCTACAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPLEVA*GPTGGI
Trigger: GATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLLAVL*LLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTTTGCCCTTCACCTGTTaGGAGAAGCATGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLLPFTC*EKHVGS
Trigger: ACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAA...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTTTAGTGTTTGCATTGTaGCAGTGCACGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLLVFAL*QCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAA...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAATTAAACCTGCAAGATaGTGGTTGGGGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASIKPAR*WLGTGL
Trigger: CAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAAT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASENHSQ*VADSAV
Trigger: CACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVENHSQ*VADSAV
Trigger: CACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAGATTCTGGTACCCCTaGAGAAGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMRFWYP*RSCCCC
Trigger: GCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAATTGTGGACTGTCCTTaGAACGCCTGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASIVDCP*NAWRFW
Trigger: CCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAAT...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATATTGTGGACTGTCCTTaGAACGCCTGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHIVDCP*NAWRFW
Trigger: CCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAAT...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTGTTGACCAAGAGATaGGTCAATCCTCGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLLTKR*VNPRLQ
Trigger: TTGCAACCGAGGATTGACCCATCTCTTGGTCAACAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTTCTCGGGCTCCACCCCTTGTTGATACGACATTTTGTTGACTATAACCATCCCCCTGCATTCCTTTGCTaGCTGCATCGACAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LLGLHPLLIRHFVDYNHPPAFLC*LHRQLL
Trigger: AAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGG...GGGATGGTTATAGTCAACAAAATGTCGTATCAACAAGGGGTGGAGCCCGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCCATGGCACTCAGAGCTaGAATGGGGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSHGTQS*NGADLS
Trigger: ACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATG...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGTCAGTCCTTTGATTTaGCCCCAGACCAAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSVSPLI*PQTKSP
Trigger: TGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGAC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTCACCCTGTGGGATTTaGTGTACAGTCCCAGACATT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVSPCGI*CTVPDI
Trigger: AATGTCTGGGACTGTACACCAAATCCCACAGGGTGA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTTGTCTGTCACCCTGTaGGATTTGGTGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWLSVTL*DLVYSP
Trigger: GGGACTGTACACCAAATCCCACAGGGTGACAGACAA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGGTCAGATTGAAAGATaGCAGGGGAAGCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVGQIER*QGKHGS
Trigger: GCTGCCATGCTTCCCCTGCCATCTTTCAATCTGACC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGACTGTTGAGTTTAGCTaGACCAGGTGTATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVTVEFS*TRCIPS
Trigger: GCTGGGAATACACCTGGTCCAGCTAAACTCAACAGT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCAGCCATTGCACAGGATaGCTGTACAGGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVSHCTG*LYRRTM
Trigger: CATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCT...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGCCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAGGCAAAGCAGTATTTaGGGCCCCACAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHERQSSI*GPTTRG
Trigger: ACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAAAGCCATGCCCGACTaGCTGAGCATCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGKAMPD*LSIPQF
Trigger: GAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAAAGCCATGCCCGACTaGCTGAGCATCCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAKAMPD*LSIPQF
Trigger: GAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLPMGS*LCSGFP
Trigger: TGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALPMGS*LCSGFP
Trigger: TGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMASQGVS*KGGSVV
Trigger: CACTACACTTCCACCTTTTCAAGATACACCTTGTGA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCCATCCTTCACCTGTTaGCCAAGAGATGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVPSFTC*PRDGSI
Trigger: GATTGACCCATCTCTTGGTCAACAGGTGAAGGATGG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCCCATGTTCCGTCCATaGATGACCGCACTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLPMFRP*MTALTA
Trigger: TGCTGTCAGTGCGGTCATTCATGGACGGAACATGGG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAATGCTTTTAGCATCTaGAGGGCTAGGCACACACCC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVNAFSI*RARHTP
Trigger: GGGTGTGTGCCTAGCCCTTCAGATGCTAAAAGCATT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCCAAGTCGCCAACATTaGACGTCCTTGGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVPSRQH*TSLVYN
Trigger: ATTATAGACCAAGGACGTTCAATGTTGGCGACTTGG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAAGGAAGTCAGTCCTTTaGTTTGGCCCCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHERKSVL*FGPRPS
Trigger: ACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGGGGCTTTGTTGACATaGATTGTGAACGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMGALLT*IVNVVF
Trigger: GAAGACGACGTTCACAATTCATGTCAACAAAGCCCC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASSLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAGGTGGTGGGCAGTTTaGGGTGCTGAGCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLRWWAV*GAEPAI
Trigger: AATAGCAGGCTCAGCACCTCAAACTGCCCACCACCT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTTCATGTGACTGCATaGAGGAACTGGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLHVTA*RNWAGN
Trigger: ATTGCCTGCCCAGTTCCTTCATGCAGTCACATGAAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATGCTTTTTGGCTCACTaGTTTAATATTCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGCFLAH*FNIHFW
Trigger: CCAGAAGTGAATATTAAATCAGTGAGCCAAAAAGCA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAATGTACATCTTTCCTaGCCCCCACTTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMNVHLS*PPLLSA
Trigger: GGCACTCAAAAGTGGGGGGCAGGAAAGATGTACATT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGTTGACATCCTCTGTTaGCATCTGCCATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGVDILC*HLPWWS
Trigger: TGACCACCATGGCAGATGGCAACAGAGGATGTCAAC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGCCTTAACATCTTCTaGGGTTCTCTGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCLNIF*GSLFHS
Trigger: GCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAGATGTGGGGCTTCCATaGTTTTATGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASDVGLP*FYEVWP
Trigger: TGGCCACACTTCATAAAAGCATGGAAGCCCCACATC...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVHVHC*PISVGG
Trigger: ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGCAGGCCTCCATGGCTaGCACGGAATGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGAGLHG*HGMEIS
Trigger: AGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHTTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAAARPL*PSPVGR
Trigger: TCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLAARPL*PSPVGR
Trigger: TCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASNPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATGGCAGGGTGGTTGGTaGCCGCTATGGCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIWQGGW*PLWLWR
Trigger: CCTCCATAGCCATAGCGGGCACCAACCACCCTGCCA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCAGTGGGTTTCCAGCTaGAGTGGTGACTATGACGCC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGQWVSS*SGDYDA
Trigger: GGCGTCATAGTCACCACTGCAGCTGGAAACCCACTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCAGTGGGTTTCCAGCTaGAGTGGTGACTATGACGCC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAQWVSS*SGDYDA
Trigger: GGCGTCATAGTCACCACTGCAGCTGGAAACCCACTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGGGTCAATCCTCGGTTaGAACTCACAAGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMGSILG*NSQGVS
Trigger: AGATACACCTTGTGAGTTGCAACCGAGGATTGACCC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCATTCCTTTGCTGGCTaGATCGACAACTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVHSFAG*IDNCFV
Trigger: TACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGTGGTGATGACAACCTaGATTCCTTTGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSVVMTT*IPLLAA
Trigger: TGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCAC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAGTTGTACTGTTGACTaGAGTGGTGATGACAACCTG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASSCTVD*SGDDNL
Trigger: CAGGTTGTCATCACCACTGCAGTCAACAGTACAACT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGGTCTTGCTTTGCAGTaGTTAGCAGCTCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMGLALQ*LAALQI
Trigger: GATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTGGTCTTGCTTTGCAGTaGTTAGCAGCTCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLGLALQ*LAALQI
Trigger: GATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACC...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGGGAAGCATGGCAGCTaGTTGGGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGGKHGS*LGLVLK
Trigger: CTTCAGAACCAAGCCCAAGCAGCTGCCATGCTTCCC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGGGAAGCATGGCAGCTaGTTGGGCTTGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAGKHGS*LGLVLK
Trigger: CTTCAGAACCAAGCCCAAGCAGCTGCCATGCTTCCC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGTTGTCTGACTGATTaGTTGGCAAATGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCCLTD*LANGLV
Trigger: CACCAGACCATTTGCCAAGCAATCAGTCAGACAACA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGGCGCTCCAGTTCACTaGAATAGCTTCCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGGAPVH*NSFLLH
Trigger: ATGAAGCAGGAAGCTATTGCAGTGAACTGGAGCGCC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGATGGCCTTCAAAAGTaGGCCAGTGCAGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVDGLQK*ASAAQF
Trigger: AAACTGTGCTGCACTGGCCCACTTTTGAAGGCCATC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVRNLYS*KTSFLV
Trigger: GACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASRNLYS*KTSFLV
Trigger: GACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGCCGAGAAGGTACTACTaGAGTTGCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMPRRYY*SCICSS
Trigger: GGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGG...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAATGGCTGCCACGGAATaGAGATTTCTGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASMAATE*RFLSMF
Trigger: GAACATGGACAGAAATCTCCATTCCGTGGCAGCCAT...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTGGGCAGGCCTCCATaGCTGCCACGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILGRPP*LPRNGD
Trigger: ATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCCAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTGATGACGCTGGGCTaGGCAGGCCTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLMTLG*AGLHGC
Trigger: GCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATGGAGGAGGGGGAGGTaGGCCTTGGGGTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPWRRGR*ALGWFV
Trigger: CACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGATGAGCGTGATCTTTaGGGCGATGCCTCAATCCTT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVDERDL*GDASIL
Trigger: AAGGATTGAGGCATCGCCCCAAAGATCACGCTCATC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACCACTAGAAGTGGCCTaGGGTCCTACAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEPLEVA*GPTGGI
Trigger: GATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACTGCAAGATGGTGGTTaGGGACTGGACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLQDGG*GLDCYC
Trigger: ACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTGCAAGATGGTGGTTaGGGACTGGACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLQDGG*GLDCYC
Trigger: ACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTTGTGATGGCAGGGTaGTTGGTGCCCGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAFVMAG*LVPAMA
Trigger: AGCCATAGCGGGCACCAACCACCCTGCCATCACAAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTTGTGATGGCAGGGTaGTTGGTGCCCGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFVMAG*LVPAMA
Trigger: AGCCATAGCGGGCACCAACCACCCTGCCATCACAAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHENHSQ*VADSAV
Trigger: CACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTC...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGTCCTTGGAACGCCTaGAGATTCTGGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGCPWNA*RFWYPW
Trigger: CCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGTCCTTGGAACGCCTaGAGATTCTGGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLCPWNA*RFWYPW
Trigger: CCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGGGGTTATTGTTAGCTaGGCAAGGAATTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMGVIVS*ARNCGL
Trigger: CAGTCCACAATTCCTTGCCCAGCTAACAATAACCCC...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATACGGAAGCATCACCTaGGCCACCCACAACGAGGCC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIYGSIT*ATHNEA
Trigger: GGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCCTGCATTCCTTTGCTaGCTGCATCGACAACTGCTT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVPAFLC*LHRQLL
Trigger: AAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCATGGTCTAGATTCTTaGGCAGCCGAGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAHGLDS*AAEPLL
Trigger: CAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCCATGGTCTAGATTCTTaGGCAGCCGAGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETHGLDS*AAEPLL
Trigger: CAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATG...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTCCCCAGGCAGAAATaGCAGTGTAGAGACATTGTT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASFPRQK*QCRDIV
Trigger: AACAATGTCTCTACACTGCCATTTCTGCCTGGGGAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGTCACCCTGTGGGATTTaGTGTACAGTCCCAGACATT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMSPCGI*CTVPDI
Trigger: AATGTCTGGGACTGTACACCAAATCCCACAGGGTGA...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAGGGGTTTAAGGGTTTaGGGCAGGGACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVARGLRV*GRDWWF
Trigger: GAACCACCAGTCCCTGCCCCAAACCCTTAAACCCCT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAAAAGTGAGCCCAGGTaGCATGCTCTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAKSEPR*HALCCG
Trigger: GCCACAGCACAGAGCATGCCACCTGGGCTCACTTTT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAAAAGTGAGCCCAGGTaGCATGCTCTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLKSEPR*HALCCG
Trigger: GCCACAGCACAGAGCATGCCACCTGGGCTCACTTTT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGGAGAGCTGGGGAAGTaGCTGCTCCTGGGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIGELGK*LLLGVV
Trigger: CACTACACCCAGGAGCAGCCACTTCCCCAGCTCTCC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAACAAGCGTTGTGTGTaGCTCAGCAGTGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVNKRCV*LSSVME
Trigger: CTCCATTACACTGCTGAGTCACACACAACGCTTGTT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTCCTCCGGGACTGGTaGGCACCAGAGAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLLRDW*APEKDV
Trigger: CACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMRLISY*SWSCCP
Trigger: CGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCT...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR TCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMRLISY*SWSCCP
Trigger: CGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGAATTGGGAGCTCCATaGAAACCAGGATTACTTCTT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASELGAP*KPGLLL
Trigger: AAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGTTAATGGCTTTTTCTaGAGAGCACAAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASVNGFF*RAQEGG
Trigger: TCCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAAC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMANASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCATAGACTGTAGTAACTaGGACATTGAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAIDCSN*DIELMG
Trigger: TCCCATCAGTTCAATGTCTCAGTTACTACAGTCTAT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGGCAAAGCAGTATTTaGGGCCCCACAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRQSSI*GPTTRG
Trigger: ACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAGGCAAAGCAGTATTTaGGGCCCCACAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRQSSI*GPTTRG
Trigger: ACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTGTTGGATGGAAAATaGAGTGCGTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALLDGK*SACSWP
Trigger: TGGCCAGGAGCACGCACTTCATTTTCCATCCAACAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGGAAGATGGTTGTTTaGAGTGCTGTTGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVWKMVV*SAVGWK
Trigger: TTTCCATCCAACAGCACTTCAAACAACCATCTTCCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCACCAATTGAGGCAGTaGAGGCACTCATGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAHQLRQ*RHSWHS
Trigger: TGAGTGCCATGAGTGCCTTCACTGCCTCAATTGGTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCACCAATTGAGGCAGTaGAGGCACTCATGGCACTCA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGHQLRQ*RHSWHS
Trigger: TGAGTGCCATGAGTGCCTTCACTGCCTCAATTGGTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCAGCCGAGCCCCTCTTaGATTCCTCAGCCTACCATC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETQPSPS*IPQPTI
Trigger: GATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGGCAACTTGCTGACTTaGAATATTCAAACCCATCTC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVGNLLT*NIQTHL
Trigger: GAGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTAGACACCCGAAATTaGGTCCAGTGCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLDTRN*VQCFQA
Trigger: TGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAAAAACCCTCAATTCTaGGCACCAGCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAKNPQF*APAVVQ
Trigger: CTGCACCACCGCTGGTGCTCAGAATTGAGGGTTTTT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAAAAACCCTCAATTCTaGGCACCAGCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGKNPQF*APAVVQ
Trigger: CTGCACCACCGCTGGTGCTCAGAATTGAGGGTTTTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAATCTCCTAGCAGCCTaGGTGGCAGACTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLNLLAA*VADCCV
Trigger: CACACAACAGTCTGCCACTCAGGCTGCTAGGAGATT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGGCAGTTTGAGGTGCTaGGCCTGCTATTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLGSLRC*ACYWRI
Trigger: GATTCTCCAATAGCAGGCTCAGCACCTCAAACTGCC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGAACCAACTTAAGGAATaGCCTTGGTCTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVNQLKE*PWSPFS
Trigger: GGAAAATGGAGACCAAGGTCATTCCTTAAGTTGGTT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGAAGGGTTCCTACTTTaGGGTCATGAAGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGEGFLL*GHEAQG
Trigger: ACCCTGGGCTTCATGACCTCAAAGTAGGAACCCTTC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCAATGTTTCTGCCATTaGCACCACTGCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLQCFCH*HHCCPT
Trigger: GGTGGGACAGCAGTGGTGTCAATGGCAGAAACATTG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGGCTCCACCCCTTGTTaGTACGACATTTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSGSTPC*YDILLT
Trigger: AGTCAACAAAATGTCGTATCAACAAGGGGTGGAGCC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTCAAAAGTGGGCCAGTaGAGCACAGTTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVSKVGQ*STVFPR
Trigger: TCTGGGAAAAACTGTGCTGCACTGGCCCACTTTTGA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGTGACATCTTCATCTaGCTTAACATCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCDIFI*LNIFCG
Trigger: ACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVASVHVH*CPISVG
Trigger: CCCGACAGAGATTGGGCAGCAGTGAACATGGACAGA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGCAGGCCTCCATGGCTaGCACGGAATGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEAGLHG*HGMEIS
Trigger: AGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAAARPL*PSPVGR
Trigger: TCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCCAGGTTTAGGAACTaGAGAACTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: PCGIWCTVPDILSSSLMASRFRN*RTIHLR
Trigger: TCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGA...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CTTCTCGGGCTCCACCCCTTGTTGATACGACATTTTGTTGACTATAACCATCCCAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLGLHPLLIRHFVDYNHPNPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...GGGATGGTTATAGTCAACAAAATGTCGTATCAACAAGGGGTGGAGCCCGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGCTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMLGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTTTGCATTGTGGCAGTaGACGGCTTCCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVFALWQ*TASPLK
Trigger: TTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCTTTGCATTGTGGCAGTaGACGGCTTCCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSFALWQ*TASPLK
Trigger: TTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGGATGGAAAATGAAGTaGGTGCTCCTGGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVGWKMK*VLLANK
Trigger: TTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCGGATGGAAAATGAAGTaGGTGCTCCTGGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVGWKMK*VLLANK
Trigger: TTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCC...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGGGTCAATCCTCGGTTaGAACTCACAAGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVGSILG*NSQGVS
Trigger: AGATACACCTTGTGAGTTGCAACCGAGGATTGACCC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTGGCTGCATCGACAACTaGTTTGTAAATGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLGCIDN*FVNGIY
Trigger: GTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCC...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCATTCCTTTGCTGGCTaGATCGACAACTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHHSFAG*IDNCFV
Trigger: TACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAAGTTGTACTGTTGACTaGAGTGGTGATGACAACCTG +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASSCTVD*SGDDNL
Trigger: CAGGTTGTCATCACCACTGCAGTCAACAGTACAACT...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACCTCTGATAATGGTTaGAAAGTGGGGTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASTSDNG*KVGFLP
Trigger: AGGCAAAAACCCCACTTTGCAACCATTATCAGAGGT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGGGAACACTGCAAACTaGATGGAAGATTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASGNTAN*MEDYQS
Trigger: ACTTTGGTAATCTTCCATGCAGTTTGCAGTGTTCCC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMRNLYS*KTSFLV
Trigger: GACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWRNLYS*KTSFLV
Trigger: GACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCT...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVHQRRM*GFHAFM
Trigger: CATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTG...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACCGAGAAGGTACTACTaGAGTTGCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGPRRYY*SCICSS
Trigger: GGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTGGAGTTCTTGTTGTTaGCTTCCAGGCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWWSSCC*LPGSSC
Trigger: ACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTGGAGTTCTTGTTGTTaGCTTCCAGGCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMWSSCC*LPGSSC
Trigger: ACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTATGGCTGCCACGGAATaGAGATTTCTGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVMAATE*RFLSMF
Trigger: GAACATGGACAGAAATCTCCATTCCGTGGCAGCCAT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCTTGGGGTGGTTTGTaGTGGAACATTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPWGGL*WNIARG
Trigger: ACCACGAGCAATGTTCCACCACAAACCACCCCAAGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASTRFYS*QWEITW
Trigger: CCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCACTAGAAGTGGCCTaGGGTCCTACAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPLEVA*GPTGGI
Trigger: GATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGATGGTGGTTGGGGACTaGACTGTTACTGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWMVVGD*TVTVNK
Trigger: TTTGTTCACAGTAACAGTCCAGTCCCCAACCACCAT...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGATGGTGGTTGGGGACTaGACTGTTACTGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMMVVGD*TVTVNK
Trigger: TTTGTTCACAGTAACAGTCCAGTCCCCAACCACCAT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAATTAAACCTGCAAGATaGTGGTTGGGGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGIKPAR*WLGTGL
Trigger: CAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAAT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGCTAACAATGCTGTTTaGTATCACTGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMANNAV*YHWSGG
Trigger: TCCTCCACTCCAGTGATACCAAACAGCATTGTTAGC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGCCCGCTATGGCTATaGAGGATGATGGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVACPLWL*RMMVLN
Trigger: GTTCAGGACCATCATCCTCCATAGCCATAGCGGGCA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGAAGGGGTGTGGAAGATaGTTGTTTGAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMKGCGR*LFEVLL
Trigger: CAACAGCACTTCAAACAACCATCTTCCACACCCCTT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAACGCCTGGAGATTCTaGTACCCCTGGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGNAWRF*YPWRSC
Trigger: GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTGGGCAAGGAATTGTaGACTGTCCTTGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLGKEL*TVLGTP
Trigger: AGGCGTTCCAAGGACAGTCCACAATTCCTTGCCCAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTGGGCAAGGAATTGTaGACTGTCCTTGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALGKEL*TVLGTP
Trigger: AGGCGTTCCAAGGACAGTCCACAATTCCTTGCCCAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGGGGTTATTGTTAGCTaGGCAAGGAATTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVGVIVS*ARNCGL
Trigger: CAGTCCACAATTCCTTGCCCAGCTAACAATAACCCC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCAACTGCTTTGTAAATaGCATCTACGGAAGCATCAC +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVQLLCK*HLRKHH
Trigger: GTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTCACATTTTTCCCATaGTCTAGATTCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASFTFFP*SRFLGS
Trigger: GCTGCCCAAGAATCTAGACCATGGGAAAAATGTGAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTTCCCCAGGCAGAAATaGCAGTGTAGAGACATTGTT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHFPRQK*QCRDIV
Trigger: AACAATGTCTCTACACTGCCATTTCTGCCTGGGGAA...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTCACCCTGTGGGATTTaGTGTACAGTCCCAGACATT +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVSPCGI*CTVPDI
Trigger: AATGTCTGGGACTGTACACCAAATCCCACAGGGTGA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACAACTGAAGTCAGGCTaGAAGCCTAAACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASQLKSG*KPKLCL
Trigger: TAAGCAAAGTTTAGGCTTCCAGCCTGACTTCAGTTG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATGGCAGGGGAAGCATaGCAGCTGCTTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIMAGEA*QLLGLG
Trigger: ACCAAGCCCAAGCAGCTGCCATGCTTCCCCTGCCAT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCTTGGCAAATGGTCTaGTGGGGCTGTCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLAWQMV*WGCHLC
Trigger: ACACAGATGACAGCCCCACCAGACCATTTGCCAAGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTGGTAGTGGTTGCCTaGGAGGAGGTTGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVVVVA*EEVAME
Trigger: TTCCATAGCAACCTCCTCCCAGGCAACCACTACCAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCTTCCCTGGAGCTGTaGAGGATGACACAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPSLEL*RMTQRV
Trigger: TACCCTTTGTGTCATCCTCCACAGCTCCAGGGAAGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATCTGGAATGGAGCAGTaGCTGCTCCTCCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVSGMEQ*LLLQKG
Trigger: TCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTCACCCTGTGGGATTTaGTGTACCTTCCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSPCGI*CTFPSS
Trigger: CGAGGAAGGGAAGGTACACCAAATCCCACAGGGTGA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630352.1
CDS-3UTR TCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTTATATTACAGAGCATaGTGGCCTTCAAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHLYYRA*WPSKVG
Trigger: GCCCACTTTTGAAGGCCATCATGCTCTGTAATATAA...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGCTTCCATGCTTTTATaGAGTGTGGCCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVASMLL*SVATAI
Trigger: TATTGCAGTGGCCACACTTCATAAAAGCATGGAAGC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAGCCATTGCACAGGATaGCTGTACAGGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSHCTG*LYRRTM
Trigger: CATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASMITGF*FTGLLG
Trigger: TCCTAGTAAACCAGTGAATCAGAACCCTGTTATCAT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGATGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGCWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVCWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVNASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAACTGAGACATTGAACTaGTGGGAAATGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHETETLN*WEMNPD
Trigger: GTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAATAGACTGTAGTAACTaGGACATTGAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASIDCSN*DIELMG
Trigger: TCCCATCAGTTCAATGTCTCAGTTACTACAGTCTAT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVTGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASTGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILPMGS*LCSGFP
Trigger: TGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACTGTTGGATGGAAAATaGAGTGCGTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWALLDGK*SACSWP
Trigger: TGGCCAGGAGCACGCACTTCATTTTCCATCCAACAG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTTGGAAGATGGTTGTTTaGAGTGCTGTTGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLWKMVV*SAVGWK
Trigger: TTTCCATCCAACAGCACTTCAAACAACCATCTTCCA...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTTTAGGAGATGCTGTTaGTTCACTGGCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVFRRCC*FTGKEI
Trigger: TATCTCTTTGCCAGTGAATCAACAGCATCTCCTAAA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMSQGVS*KGGSVV
Trigger: CACTACACTTCCACCTTTTCAAGATACACCTTGTGA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCCCATCCTTCACCTGTTaGCCAAGAGATGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETPSFTC*PRDGSI
Trigger: GATTGACCCATCTCTTGGTCAACAGGTGAAGGATGG...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGGAATGGGGCTGATCTaGGTTGTACTGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLGMGLI*VVLLTA
Trigger: TGCAGTCAACAGTACAACTCAGATCAGCCCCATTCC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCCATGTTCCGTCCATaGATGACCGCACTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPMFRP*MTALTA
Trigger: TGCTGTCAGTGCGGTCATTCATGGACGGAACATGGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCCCATGTTCCGTCCATaGATGACCGCACTGACAGCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETPMFRP*MTALTA
Trigger: TGCTGTCAGTGCGGTCATTCATGGACGGAACATGGG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTCAGCCTACCATCATaGTCAACACCTCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLSLPS*STPPMF
Trigger: GAACATGGGAGGTGTTGATCATGATGGTAGGCTGAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTGGCAACTTGCTGACTTaGAATATTCAAACCCATCTC +
Preference number: 4 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLGNLLT*NIQTHL
Trigger: GAGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCC...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAGGAAGTCAGTCCTTTaGTTTGGCCCCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVARKSVL*FGPRPS
Trigger: ACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVSLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGTTGCTATCAAAAGTaGGCCCAGGTGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGCCYQK*AQVACS
Trigger: AGAGCATGCCACCTGGGCTCACTTTTGATAGCAACA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTATGCATATATGCTTGTaGCTTGCAAGGGAACACTGC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVMHICL*LAREHC
Trigger: GCAGTGTTCCCTTGCAAGTCACAAGCATATATGCAT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTTATAAAAGGTCACTaGGGTACACACACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASFIKGH*GTHTVC
Trigger: ACACACTGTGTGTGTACCTCAGTGACCTTTTATAAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTGAGATGGTCAGATTaGAAGATGGCAGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLRWSD*KMAGEA
Trigger: TGCTTCCCCTGCCATCTTTCAATCTGACCATCTCAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCGGCTGTTGTCTGACTaGTTGCTTGGCAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGRLLSD*LLGKWS
Trigger: AGACCATTTGCCAAGCAATCAGTCAGACAACAGCCG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATGGAAACCTCTGGATaGTTAGCGGTGTTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAMETSG*LAVLAD
Trigger: ATCGGCCAACACCGCTAATCATCCAGAGGTTTCCAT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTGTCCCACCAAGTGTTaGGACAGTCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETCPTKC*DSQCCH
Trigger: GTGGCAGCACTGACTGTCTCAACACTTGGTGGGACA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAAATATGATGAGTGAGTaGAAAGCTGGAAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGNMMSE*KAGSPL
Trigger: TAGGGGGCTTCCAGCTTTTCACTCACTCATCATATT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTTGACATCCTCTGTTaGCATCTGCCATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVDILC*HLPWWS
Trigger: TGACCACCATGGCAGATGGCAACAGAGGATGTCAAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTGAATCCAAGGTGTTaGAGGTTGGTTCATCTGATG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLNPRC*RLVHLM
Trigger: CATCAGATGAACCAACCTGCAACACCTTGGATTCAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTGCCTTAACATCTTCTaGGGTTCTCTGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVCLNIF*GSLFHS
Trigger: GCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGATGCCTTAACATCTTCTaGGGTTCTCTGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGCLNIF*GSLFHS
Trigger: GCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCA...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTGCCTTAACATCTTCTaGGGTTCTCTGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVCLNIF*GSLFHS
Trigger: GCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR GCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGTGTGACATCTTCATCTaGCTTAACATCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMCDIFI*LNIFCG
Trigger: ACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACA...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETVHVHC*PISVGG
Trigger: ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGAC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVHVHC*PISVGG
Trigger: ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACCAGTCCCCATCATGTaGACGGGGGATGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQPVPIM*TGDVTG
Trigger: TCCAGTGACATCCCCCGTGCACATGATGGGGACTGG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGNPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHENPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVLGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCATTCCTTTGCTGGCTaGATCGACAACTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVHSFAG*IDNCFV
Trigger: TACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCAACCTGCATTCCTTTaGTGGCTGCATCGACAACTG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAQPAFL*WLHRQL
Trigger: CAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTGGTGATGACAACCTaGATTCCTTTGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVVMTT*IPLLAA
Trigger: TGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGTGGTGATGACAACCTaGATTCCTTTGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLVVMTT*IPLLAA
Trigger: TGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCAC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGAGAAATCTGCAAAGTTaGAATTTCCTAGACACCCGA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVRNLQS*NFLDTR
Trigger: TCGGGTGTCTAGGAAATTGCAACTTTGCAGATTTCT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAGGTGGCATGCTCTGTaGTGTGGCCCCAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRWHAL*CGPKKP
Trigger: TGGTTTCTTGGGGCCACAGCACAGAGCATGCCACCT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACCCAGGGTAGCCAGTTaGATTCCATCAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQPRVAS*IPSGLG
Trigger: CCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCCAGGGTAGCCAGTTaGATTCCATCAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPRVAS*IPSGLG
Trigger: CCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACTAGGCCAACATTCCTaGCTTGCAACAATTATCTGG +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLGQHS*LATIIW
Trigger: CCAGATAATTGTTGCAAGGCAGGAATGTTGGCCTAG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAACATGTGGGTTAGAATaGTTCTCCAGCATGACGGTA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGTCGLE*FSSMTV
Trigger: TACCGTCATGCTGGAGAAGCATTCTAACCCACATGT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTATAATTCACCAATGCTaGTACCTGTCTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVIIHQC*YLSEVG
Trigger: CCCCACTTCAGACAGGTACCAGCATTGGTGAATTAT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMLYKTH*EASAQF
Trigger: AAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGATGGCCTTCAAAAGTaGGCCAGTGCAGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVADGLQK*ASAAQF
Trigger: AAACTGTGCTGCACTGGCCCACTTTTGAAGGCCATC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGRNLYS*KTSFLV
Trigger: GACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCATATAGCCTTCCCATaGCATTTGATGATCCAATCA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVHIAFP*HLMIQS
Trigger: TGATTGGATCATCAAATGCCATGGGAAGGCTATATG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGATGGAGTTCTTGTTGTTaGCTTCCAGGCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGWSSCC*LPGSSC
Trigger: ACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCA...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTGGGCAGGCCTCCATaGCTGCCACGGAATGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLGRPP*LPRNGD
Trigger: ATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCCAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCATCTCCATATATCTaGGAACCTGATGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPSPYI*EPDDAG
Trigger: CCCAGCGTCATCAGGTTCCCAGATATATGGAGATGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACCATCTCCATATATCTaGGAACCTGATGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVPSPYI*EPDDAG
Trigger: CCCAGCGTCATCAGGTTCCCAGATATATGGAGATGG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCCATCTCCATATATCTaGGAACCTGATGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLPSPYI*EPDDAG
Trigger: CCCAGCGTCATCAGGTTCCCAGATATATGGAGATGG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGATGAGCGTGATCTTTaGGGCGATGCCTCAATCCTT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLDERDL*GDASIL
Trigger: AAGGATTGAGGCATCGCCCCAAAGATCACGCTCATC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACATGATCTGATGATGTaGAAGATGAGCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASHDLMM*KMSVIF
Trigger: AAAGATCACGCTCATCTTCCACATCATCAGATCATG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTGCCCTTCACCTGTTaGGAGAAGCATGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLPFTC*EKHVGS
Trigger: ACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCACAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTAGTGTTTGCATTGTaGCAGTGCACGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVLVFAL*QCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTAGTGTTTGCATTGTaGCAGTGCACGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALVFAL*QCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTGCAAGATGGTGGTTaGGGACTGGACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLQDGG*GLDCYC
Trigger: ACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTGCAAGATGGTGGTTaGGGACTGGACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLQDGG*GLDCYC
Trigger: ACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGCTAACAATGCTGTTTaGTATCACTGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGANNAV*YHWSGG
Trigger: TCCTCCACTCCAGTGATACCAAACAGCATTGTTAGC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCGCTAACAATGCTGTTTaGTATCACTGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVANNAV*YHWSGG
Trigger: TCCTCCACTCCAGTGATACCAAACAGCATTGTTAGC...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTGTGATGGCAGGGTaGTTGGTGCCCGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFVMAG*LVPAMA
Trigger: AGCCATAGCGGGCACCAACCACCCTGCCATCACAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGTTTGAAGTGCTGTTaGATGGAAAATGAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCLKCC*MENEVR
Trigger: ACGCACTTCATTTTCCATCCAACAGCACTTCAAACA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCAAGGGGTGTGGAAGATaGTTGTTTGAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVKGCGR*LFEVLL
Trigger: CAACAGCACTTCAAACAACCATCTTCCACACCCCTT...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATCTCCTGCTGAAGGCTaGAGGATATTTAATAGATTC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASSPAEG*RIFNRF
Trigger: GAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAGATTCTGGTACCCCTaGAGAAGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVARFWYP*RSCCCC
Trigger: GCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAGATTCTGGTACCCCTaGAGAAGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLRFWYP*RSCCCC
Trigger: GCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATTGTGGACTGTCCTTaGAACGCCTGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLIVDCP*NAWRFW
Trigger: CCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGTGGAAGTGTAGTGTTTaGATTCTCAGGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMWKCSV*ILRKCC
Trigger: ACAGCACTTCCTGAGAATCCAAACACTACACTTCCA...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGCAACTGCTTTGTAAATaGCATCTACGGAAGCATCAC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWQLLCK*HLRKHH
Trigger: GTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTG...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACATGGTCTAGATTCTTaGGCAGCCGAGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIHGLDS*AAEPLL
Trigger: CAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTTCACATTTTTCCCATaGTCTAGATTCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHFTFFP*SRFLGS
Trigger: GCTGCCCAAGAATCTAGACCATGGGAAAAATGTGAA...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTTGTCTGTCACCCTGTaGGATTTGGTGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLSVTL*DLVYSP
Trigger: GGGACTGTACACCAAATCCCACAGGGTGACAGACAA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSSSWV*GVSFVC
Trigger: ACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETSSSWV*GVSFVC
Trigger: ACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGA...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSSSWV*GVSFVC
Trigger: ACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAGTAGTCTCTGTTATCTaGAGATCTTCCTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEVVSVI*RSSSSW
Trigger: CCAAGAGGAGGAAGATCTCCAGATAACAGAGACTAC...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGGGGTTTAAGGGTTTaGGGCAGGGACTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRGLRV*GRDWWF
Trigger: GAACCACCAGTCCCTGCCCCAAACCCTTAAACCCCT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCATGCTCTGTGCTGTaGCCCCAAGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLACSVL*PQETNL
Trigger: TAAGTTGGTTTCTTGGGGCCACAGCACAGAGCATGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAATGGCAGGGGAAGCATaGCAGCTGCTTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPMAGEA*QLLGLG
Trigger: ACCAAGCCCAAGCAGCTGCCATGCTTCCCCTGCCAT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGCCCCATTGACAGCTaGGAGGAACAGGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGPIDS*EEQGVK
Trigger: TTTAACCCCCTGTTCCTCCCAGCTGTCAATGGGGCC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGGTAGGAGTCGTGGATaGGGGTTTTCGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAGRSRG*GFSKKK
Trigger: CTTCTTCTTCGAAAACCCCCATCCACGACTCCTACC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAACAAGCGTTGTGTGTaGCTCAGCAGTGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLNKRCV*LSSVME
Trigger: CTCCATTACACTGCTGAGTCACACACAACGCTTGTT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACTTTATCTTCCAATCTaGATCCAAGGTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLYLPI*IQGVAG
Trigger: ACCTGCAACACCTTGGATTCAGATTGGAAGATAAAG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTTATATTACAGAGCATaGTGGCCTTCAAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLYYRA*WPSKVG
Trigger: GCCCACTTTTGAAGGCCATCATGCTCTGTAATATAA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCACAGGATTACTTCTTGTaGAAACATCAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASQDYFL*KHQDFQ
Trigger: TTGGAAGTCCTGATGTTTTCACAAGAAGTAATCCTG...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR TCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGAATTGGGAGCTCCATaGAAACCAGGATTACTTCTT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSELGAP*KPGLLL
Trigger: AAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGAATTGGGAGCTCCATaGAAACCAGGATTACTTCTT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVELGAP*KPGLLL
Trigger: AAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAGCCATTGCACAGGATaGCTGTACAGGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHESHCTG*LYRRTM
Trigger: CATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAGCCATTGCACAGGATaGCTGTACAGGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWASHCTG*LYRRTM
Trigger: CATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGTTAATGGCTTTTTCTaGAGAGCACAAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGVNGFF*RAQEGG
Trigger: TCCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAAC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCCCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHNASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAATGGGAAATGAACCCTaGCCCTGCTTCCTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEMGNEP*PCFLSK
Trigger: CTTGCTAAGGAAGCAGGGTCAGGGTTCATTTCCCAT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAGGCAAAGCAGTATTTaGGGCCCCACAACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTRQSSI*GPTTRG
Trigger: ACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACAGATGTTGTCTTTGTaGTGGCAGGGTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIQMLSL*WQGGWC
Trigger: GCACCAACCACCCTGCCATCACAAAGACAACATCTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLPMGS*LCSGFP
Trigger: TGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTGTTGGATGGAAAATaGAGTGCGTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILLDGK*SACSWP
Trigger: TGGCCAGGAGCACGCACTTCATTTTCCATCCAACAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCTGTTGGATGGAAAATaGAGTGCGTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETLLDGK*SACSWP
Trigger: TGGCCAGGAGCACGCACTTCATTTTCCATCCAACAG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTGGAAGATGGTTGTTTaGAGTGCTGTTGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVWKMVV*SAVGWK
Trigger: TTTCCATCCAACAGCACTTCAAACAACCATCTTCCA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTGGAAGATGGTTGTTTaGAGTGCTGTTGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVWKMVV*SAVGWK
Trigger: TTTCCATCCAACAGCACTTCAAACAACCATCTTCCA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTTTAGGAGATGCTGTTaGTTCACTGGCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWFRRCC*FTGKEI
Trigger: TATCTCTTTGCCAGTGAATCAACAGCATCTCCTAAA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGTTTAGGAGATGCTGTTaGTTCACTGGCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMFRRCC*FTGKEI
Trigger: TATCTCTTTGCCAGTGAATCAACAGCATCTCCTAAA...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACCATCCTTCACCTGTTaGCCAAGAGATGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAPSFTC*PRDGSI
Trigger: GATTGACCCATCTCTTGGTCAACAGGTGAAGGATGG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCACCAATTGAGGCAGTaGAGGCACTCATGGCACTCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHQLRQ*RHSWHS
Trigger: TGAGTGCCATGAGTGCCTTCACTGCCTCAATTGGTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATGGATATGGCCTGGATaGTCTAAAAATTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEWIWPG*SKNSSY
Trigger: GTACGAGGAATTTTTAGATCATCCAGGCCATATCCA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAATGCTTTTAGCATCTaGAGGGCTAGGCACACACCC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWANAFSI*RARHTP
Trigger: GGGTGTGTGCCTAGCCCTTCAGATGCTAAAAGCATT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGGGGCTTTGTTGACATaGATTGTGAACGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAGALLT*IVNVVF
Trigger: GAAGACGACGTTCACAATTCATGTCAACAAAGCCCC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTAGACACCCGAAATTaGGTCCAGTGCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILDTRN*VQCFQA
Trigger: TGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAAAAACCCTCAATTCTaGGCACCAGCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETKNPQF*APAVVQ
Trigger: CTGCACCACCGCTGGTGCTCAGAATTGAGGGTTTTT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGTTACAGCACTGTATaGCCTGTAATGCTAACAATA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVCYSTV*PVMLTI
Trigger: TATTGTTAGCATTACAGGTCATACAGTGCTGTAACA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGCTTGGGCTTGGTTCTaGAGCAAGGCTGCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPAWAWF*SKAAKS
Trigger: GCTCTTAGCAGCCTTGCTTCAGAACCAAGCCCAAGC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACTGAGATGGTCAGATTaGAAGATGGCAGGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWALRWSD*KMAGEA
Trigger: TGCTTCCCCTGCCATCTTTCAATCTGACCATCTCAG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCTTGTGAGACCTCAATaGGTCATGAAGAATCCTAAT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHLVRPQ*VMKNPN
Trigger: ATTAGGATTCTTCATGACTCATTGAGGTCTCACAAG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAATGTACATCTTTCCTaGCCCCCACTTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLNVHLS*PPLLSA
Trigger: GGCACTCAAAAGTGGGGGGCAGGAAAGATGTACATT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTCAAAAGTGGGCCAGTaGAGCACAGTTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSKVGQ*STVFPR
Trigger: TCTGGGAAAAACTGTGCTGCACTGGCCCACTTTTGA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTGTGACATCTTCATCTaGCTTAACATCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVCDIFI*LNIFCG
Trigger: ACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGATGTGGGGCTTCCATaGTTTTATGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGDVGLP*FYEVWP
Trigger: TGGCCACACTTCATAAAAGCATGGAAGCCCCACATC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGATGTGGGGCTTCCATaGTTTTATGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVADVGLP*FYEVWP
Trigger: TGGCCACACTTCATAAAAGCATGGAAGCCCCACATC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSVHVH*CPISVG
Trigger: CCCGACAGAGATTGGGCAGCAGTGAACATGGACAGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGCAGGCCTCCATGGCTaGCACGGAATGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQAGLHG*HGMEIS
Trigger: AGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTTGTGGTGGAACATTaGTCGTGGTATTTCCATATT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASFVVEH*SWYFHI
Trigger: AATATGGAAATACCACGAGCAATGTTCCACCACAAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVATTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVTTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQNCYC*YCCYQQ
Trigger: TTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETLQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATATGTCCTTCAGTGTTaGCACTGCCGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIYVLQC*HCRQQL
Trigger: GAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTCCAGGTTTAGGAACTaGAGAACTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWSRFRN*RTIHLR
Trigger: TCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTTGCATTGTGGCAGTaGACGGCTTCCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFALWQ*TASPLK
Trigger: TTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGGATGGAAAATGAAGTaGGTGCTCCTGGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGGWKMK*VLLANK
Trigger: TTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGATGGTTGTTTGAAGTaGTGTTGGATGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVDGCLK*CWMENE
Trigger: TTCATTTTCCATCCAACAGCACTTCAAACAACCATC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGATGGTTGTTTGAAGTaGTGTTGGATGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASDGCLK*CWMENE
Trigger: TTCATTTTCCATCCAACAGCACTTCAAACAACCATC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGGGTCAATCCTCGGTTaGAACTCACAAGGTGTATCT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLGSILG*NSQGVS
Trigger: AGATACACCTTGTGAGTTGCAACCGAGGATTGACCC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACAACCTGCATTCCTTTaGTGGCTGCATCGACAACTG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAQPAFL*WLHRQL
Trigger: CAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGATTCCCATTTATGTGTaGACATCTTTCCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVIPIYV*TSFHSV
Trigger: AACACTGTGGAAAGATGTGCACACATAAATGGGAAT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGGTCTTGCTTTGCAGTaGTTAGCAGCTCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAGLALQ*LAALQI
Trigger: GATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAAGGTGGCATGCTCTGTaGTGTGGCCCCAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQRWHAL*CGPKKP
Trigger: TGGTTTCTTGGGGCCACAGCACAGAGCATGCCACCT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAACAGGCTGCAATACCTaGCCATCCATGTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAITGCNT*PSMSLE
Trigger: CTCCAGTGACATGGATGGGCAGGTATTGCAGCCTGT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVLYKTH*EASAQF
Trigger: AAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAG...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGATGGCCTTCAAAAGTaGGCCAGTGCAGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEDGLQK*ASAAQF
Trigger: AAACTGTGCTGCACTGGCCCACTTTTGAAGGCCATC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCCGAGAAGGTACTACTaGAGTTGCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLPRRYY*SCICSS
Trigger: GGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCCTTGGGGTGGTTTGTaGTGGAACATTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETPWGGL*WNIARG
Trigger: ACCACGAGCAATGTTCCACCACAAACCACCCCAAGG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMFYSWQ*EITWQR
Trigger: CCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHETRFYS*QWEITW
Trigger: CCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGATGAGCGTGATCTTTaGGGCGATGCCTCAATCCTT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEDERDL*GDASIL
Trigger: AAGGATTGAGGCATCGCCCCAAAGATCACGCTCATC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALLAVL*LLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVLLAVL*LLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCTTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETLLAVL*LLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAA...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLLAVL*LLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTGCCCTTCACCTGTTaGGAGAAGCATGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHELPFTC*EKHVGS
Trigger: ACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCATTAAACCTGCAAGATaGTGGTTGGGGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGIKPAR*WLGTGL
Trigger: CAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAAT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHLTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGENHSQ*VADSAV
Trigger: CACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAACGCCTGGAGATTCTaGTACCCCTGGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNAWRF*YPWRSC
Trigger: GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAACGCCTGGAGATTCTaGTACCCCTGGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAINAWRF*YPWRSC
Trigger: GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGGGGTTATTGTTAGCTaGGCAAGGAATTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGGVIVS*ARNCGL
Trigger: CAGTCCACAATTCCTTGCCCAGCTAACAATAACCCC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCCTGTTGACCAAGAGATaGGTCAATCCTCGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETLLTKR*VNPRLQ
Trigger: TTGCAACCGAGGATTGACCCATCTCTTGGTCAACAG...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACATGGTCTAGATTCTTaGGCAGCCGAGCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQHGLDS*AAEPLL
Trigger: CAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGTCAGTCCTTTGATTTaGCCCCAGACCAAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETVSPLI*PQTKSP
Trigger: TGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGAC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTCAGTCCTTTGATTTaGCCCCAGACCAAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVSPLI*PQTKSP
Trigger: TGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCAACTGAAGTCAGGCTaGAAGCCTAAACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVQLKSG*KPKLCL
Trigger: TAAGCAAAGTTTAGGCTTCCAGCCTGACTTCAGTTG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACACTGCAAACTGCATaGAAGATTACCAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASTLQTA*KITKVN
Trigger: GTTAACTTTGGTAATCTTCCATGCAGTTTGCAGTGT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGTCAGATTGAAAGATaGCAGGGGAAGCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGQIER*QGKHGS
Trigger: GCTGCCATGCTTCCCCTGCCATCTTTCAATCTGACC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGGCCCCATTGACAGCTaGGAGGAACAGGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPGPIDS*EEQGVK
Trigger: TTTAACCCCCTGTTCCTCCCAGCTGTCAATGGGGCC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGCTATGGAAACCTCTaGATGATTAGCGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLCYGNL*MISGVG
Trigger: GCCAACACCGCTAATCATCCAGAGGTTTCCATAGCA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGCCTCTATAGGCATGTaGGTTTCCAACTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVASIGM*VSNFFW
Trigger: CCAGAAGAAGTTGGAAACCCACATGCCTATAGAGGC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAACAAGCGTTGTGTGTaGCTCAGCAGTGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHENKRCV*LSSVME
Trigger: CTCCATTACACTGCTGAGTCACACACAACGCTTGTT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCTTCCATGCTTTTATaGAGTGTGGCCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLASMLL*SVATAI
Trigger: TATTGCAGTGGCCACACTTCATAAAAGCATGGAAGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGCTTCCATGCTTTTATaGAGTGTGGCCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGASMLL*SVATAI
Trigger: TATTGCAGTGGCCACACTTCATAAAAGCATGGAAGC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGCTTCCATGCTTTTATaGAGTGTGGCCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAASMLL*SVATAI
Trigger: TATTGCAGTGGCCACACTTCATAAAAGCATGGAAGC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGGAGTCCTATTCAGGTaGATAGGACTAGAATTGGGA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVGVLFR*IGLELG
Trigger: TCCCAATTCTAGTCCTATTCACCTGAATAGGACTCC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGGAGTCCTATTCAGGTaGATAGGACTAGAATTGGGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLGVLFR*IGLELG
Trigger: TCCCAATTCTAGTCCTATTCACCTGAATAGGACTCC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLCWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVNASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTACTGAGACATTGAACTaGTGGGAAATGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVATETLN*WEMNPD
Trigger: GTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAACTGAGACATTGAACTaGTGGGAAATGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVTETLN*WEMNPD
Trigger: GTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGACTGAGACATTGAACTaGTGGGAAATGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLTETLN*WEMNPD
Trigger: GTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHETGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVTGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAGATGTTGTCTTTGTaGTGGCAGGGTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQMLSL*WQGGWC
Trigger: GCACCAACCACCCTGCCATCACAAAGACAACATCTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTACTATGACGCCATCTTaGAGAACAGATGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVTMTPS*RTDVVF
Trigger: AAAGACAACATCTGTTCTTCAAGATGGCGTCATAGT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAACTATGACGCCATCTTaGAGAACAGATGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHETMTPS*RTDVVF
Trigger: AAAGACAACATCTGTTCTTCAAGATGGCGTCATAGT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTTTAGGAGATGCTGTTaGTTCACTGGCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVFRRCC*FTGKEI
Trigger: TATCTCTTTGCCAGTGAATCAACAGCATCTCCTAAA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGAATGGGGCTGATCTaGGTTGTACTGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGMGLI*VVLLTA
Trigger: TGCAGTCAACAGTACAACTCAGATCAGCCCCATTCC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTGTTGGGCCTTTCATaGCAAGGACTACTGTGGATA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALLGLS*QGLLWI
Trigger: TATCCACAGTAGTCCTTGTCATGAAAGGCCCAACAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCTTGTTGGGCCTTTCATaGCAAGGACTACTGTGGATA +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETLLGLS*QGLLWI
Trigger: TATCCACAGTAGTCCTTGTCATGAAAGGCCCAACAA...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGAATGGATGTAGTCTTTaGCCAGAGAATTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWNGCSL*PENFPN
Trigger: GTTTGGAAAATTCTCTGGTCAAAGACTACATCCATT...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAATGCTTTTAGCATCTaGAGGGCTAGGCACACACCC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAINAFSI*RARHTP
Trigger: GGGTGTGTGCCTAGCCCTTCAGATGCTAAAAGCATT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAATGCTTTTAGCATCTaGAGGGCTAGGCACACACCC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNAFSI*RARHTP
Trigger: GGGTGTGTGCCTAGCCCTTCAGATGCTAAAAGCATT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCAAGTCGCCAACATTaGACGTCCTTGGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPSRQH*TSLVYN
Trigger: ATTATAGACCAAGGACGTTCAATGTTGGCGACTTGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGGAAGTCAGTCCTTTaGTTTGGCCCCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRKSVL*FGPRPS
Trigger: ACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAGGAAGTCAGTCCTTTaGTTTGGCCCCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRKSVL*FGPRPS
Trigger: ACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCTTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTAGACACCCGAAATTaGGTCCAGTGCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLDTRN*VQCFQA
Trigger: TGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAAAAAACCCTCAATTCTaGGCACCAGCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQKNPQF*APAVVQ
Trigger: CTGCACCACCGCTGGTGCTCAGAATTGAGGGTTTTT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAATCTCCTAGCAGCCTaGGTGGCAGACTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPNLLAA*VADCCV
Trigger: CACACAACAGTCTGCCACTCAGGCTGCTAGGAGATT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTGTTGCAAAAGATCTaGGATGGTCAGATTGAAAGA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLLQKI*DGQIER
Trigger: TCTTTCAATCTGACCATCTCAGATCTTTTGCAACAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCGGCTGTTGTCTGACTaGTTGCTTGGCAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRLLSD*LLGKWS
Trigger: AGACCATTTGCCAAGCAATCAGTCAGACAACAGCCG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTATGGAAACCTCTGGATaGTTAGCGGTGTTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETMETSG*LAVLAD
Trigger: ATCGGCCAACACCGCTAATCATCCAGAGGTTTCCAT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTGTCCCACCAAGTGTTaGGACAGTCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTCPTKC*DSQCCH
Trigger: GTGGCAGCACTGACTGTCTCAACACTTGGTGGGACA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATCCTCTGTTGCCATCTaGCATGGTGGTCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAISSVAI*HGGHSS
Trigger: AGAGGAATGACCACCATGGCAGATGGCAACAGAGGA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATCAAAAGTGGGCCAGTaGAGCACAGTTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHESKVGQ*STVFPR
Trigger: TCTGGGAAAAACTGTGCTGCACTGGCCCACTTTTGA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGATGTGGGGCTTCCATaGTTTTATGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEDVGLP*FYEVWP
Trigger: TGGCCACACTTCATAAAAGCATGGAAGCCCCACATC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFVHVHC*PISVGG
Trigger: ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGAC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWATTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGNPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTTGCATTGTGGCAGTaGACGGCTTCCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEFALWQ*TASPLK
Trigger: TTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGATGGTTGTTTGAAGTaGTGTTGGATGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHDGCLK*CWMENE
Trigger: TTCATTTTCCATCCAACAGCACTTCAAACAACCATC...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGGCTGCATCGACAACTaGTTTGTAAATGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLGCIDN*FVNGIY
Trigger: GTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGATTCCCATTTATGTGTaGACATCTTTCCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMIPIYV*TSFHSV
Trigger: AACACTGTGGAAAGATGTGCACACATAAATGGGAAT...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGAGCACCAGCGGTGGTaGAGTCAGTATAAGCTATCT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIEHQRW*SQYKLS
Trigger: AGATAGCTTATACTGACTGCACCACCGCTGGTGCTC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAGTTTATTCTCCTTGTaGTTCCTAGGACTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVSLFSL*FLGLLR
Trigger: CCTTAACAGTCCTAGGAAGCACAAGGAGAATAAACT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAACTGCAATAGCTTCCTaGTTCATTCCCATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHETAIAS*FIPISL
Trigger: CAGGCTGATGGGAATGAAGCAGGAAGCTATTGCAGT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTCATCATCAGCTGCTaGTGCTGCTGGGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPFIISC*CCWGLS
Trigger: AGAGAGACCCCAGCAGCAGCAGCAGCTGATGATGAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CCA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAATAATGTAGCCTTCTaGAGAGAAGTGATGAAAACA +
Preference number: 4 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASNNVAF*REVMKT
Trigger: TGTTTTCATCACTTCTCTCCAGAAGGCTACATTATT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATAATTCACCAATGCTaGTACCTGTCTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLIIHQC*YLSEVG
Trigger: CCCCACTTCAGACAGGTACCAGCATTGGTGAATTAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATTCACCAATGCTaGTACCTGTCTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAIIHQC*YLSEVG
Trigger: CCCCACTTCAGACAGGTACCAGCATTGGTGAATTAT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGATGGCCTTCAAAAGTaGGCCAGTGCAGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIDGLQK*ASAAQF
Trigger: AAACTGTGCTGCACTGGCCCACTTTTGAAGGCCATC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAATGGCTGCCACGGAATaGAGATTTCTGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEMAATE*RFLSMF
Trigger: GAACATGGACAGAAATCTCCATTCCGTGGCAGCCAT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAATCAGGACTTCCAAGTaGGTCAGTCCTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEIRTSK*VSPWRD
Trigger: ATCTCTCCAAGGACTGACCCACTTGGAAGTCCTGAT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCTTGGGGTGGTTTGTaGTGGAACATTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPWGGL*WNIARG
Trigger: ACCACGAGCAATGTTCCACCACAAACCACCCCAAGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEFYSWQ*EITWQR
Trigger: CCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGATGAGCGTGATCTTTaGGGCGATGCCTCAATCCTT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIDERDL*GDASIL
Trigger: AAGGATTGAGGCATCGCCCCAAAGATCACGCTCATC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTGCCCTTCACCTGTTaGGAGAAGCATGTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILPFTC*EKHVGS
Trigger: ACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTAGTGTTTGCATTGTaGCAGTGCACGGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILVFAL*QCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCATGGTGGTTGGGGACTaGACTGTTACTGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGMVVGD*TVTVNK
Trigger: TTTGTTCACAGTAACAGTCCAGTCCCCAACCACCAT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAATGGTGGTTGGGGACTaGACTGTTACTGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVMVVGD*TVTVNK
Trigger: TTTGTTCACAGTAACAGTCCAGTCCCCAACCACCAT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGATTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVLTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCTAACAATGCTGTTTaGTATCACTGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLANNAV*YHWSGG
Trigger: TCCTCCACTCCAGTGATACCAAACAGCATTGTTAGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGCTAACAATGCTGTTTaGTATCACTGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAANNAV*YHWSGG
Trigger: TCCTCCACTCCAGTGATACCAAACAGCATTGTTAGC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCTGTTTGAAGTGCTGTTaGATGGAAAATGAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVCLKCC*MENEVR
Trigger: ACGCACTTCATTTTCCATCCAACAGCACTTCAAACA...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCTGTTTGAAGTGCTGTTaGATGGAAAATGAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSCLKCC*MENEVR
Trigger: ACGCACTTCATTTTCCATCCAACAGCACTTCAAACA...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAAGGGGTGTGGAAGATaGTTGTTTGAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGKGCGR*LFEVLL
Trigger: CAACAGCACTTCAAACAACCATCTTCCACACCCCTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAAGGGGTGTGGAAGATaGTTGTTTGAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAKGCGR*LFEVLL
Trigger: CAACAGCACTTCAAACAACCATCTTCCACACCCCTT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAAGGGGTGTGGAAGATaGTTGTTTGAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLKGCGR*LFEVLL
Trigger: CAACAGCACTTCAAACAACCATCTTCCACACCCCTT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCCTGCTGTTGCTGATTTaGAGGAAACATCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSLLLLI*RKHLIV
Trigger: AACAATCAGATGTTTCCTCCAAATCAGCAACAGCAG...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAGATTCTGGTACCCCTaGAGAAGTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRFWYP*RSCCCC
Trigger: GCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAACGCCTGGAGATTCTaGTACCCCTGGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPNAWRF*YPWRSC
Trigger: GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATTGTGGACTGTCCTTaGAACGCCTGGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIIVDCP*NAWRFW
Trigger: CCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAAT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTGGGCAAGGAATTGTaGACTGTCCTTGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLGKEL*TVLGTP
Trigger: AGGCGTTCCAAGGACAGTCCACAATTCCTTGCCCAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACATGGCACTCAGAGCTaGAATGGGGCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPHGTQS*NGADLS
Trigger: ACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTCCCCAGGCAGAAATaGCAGTGTAGAGACATTGTT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFPRQK*QCRDIV
Trigger: AACAATGTCTCTACACTGCCATTTCTGCCTGGGGAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTGTCTGTCACCCTGTaGGATTTGGTGTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILSVTL*DLVYSP
Trigger: GGGACTGTACACCAAATCCCACAGGGTGACAGACAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAISSSWV*GVSFVC
Trigger: ACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGCACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCACACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: CGIWCTVPDILSSSLMASHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATCTGAGCACCAGCGGTaGTGCAGTCAGTATAAGCTA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAISEHQR*CSQYKL
Trigger: TAGCTTATACTGACTGCACCACCGCTGGTGCTCAGA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCTGAGCACCAGCGGTaGTGCAGTCAGTATAAGCTA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSEHQR*CSQYKL
Trigger: TAGCTTATACTGACTGCACCACCGCTGGTGCTCAGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGCATGCTCTGTGCTGTaGCCCCAAGAAACCAACTTA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIACSVL*PQETNL
Trigger: TAAGTTGGTTTCTTGGGGCCACAGCACAGAGCATGC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTACACCTCCCAACAGCTaGGGATTCAAGGTCATTAAT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVATPPNS*GFKVIN
Trigger: ATTAATGACCTTGAATCCCCAGCTGTTGGGAGGTGT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAACAATTATCTGGAATaGAGCAGTGGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHENNYLE*SSGCSS
Trigger: GGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
3UTR CAA 72 bp AAATCTGCAAAGTTGCAATTTCCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGCAAGGTTCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: KSAKLQFPRHPK*SPVLPGKVHSK
Trigger: TTTGGAATGAACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTTTGCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTATATTACAGAGCATaGTGGCCTTCAAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVLYYRA*WPSKVG
Trigger: GCCCACTTTTGAAGGCCATCATGCTCTGTAATATAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTATATTACAGAGCATaGTGGCCTTCAAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALYYRA*WPSKVG
Trigger: GCCCACTTTTGAAGGCCATCATGCTCTGTAATATAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGCTTCCATGCTTTTATaGAGTGTGGCCACTGCAATA +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEASMLL*SVATAI
Trigger: TATTGCAGTGGCCACACTTCATAAAAGCATGGAAGC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHERLISY*SWSCCP
Trigger: CGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGAATTGGGAGCTCCATaGAAACCAGGATTACTTCTT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAELGAP*KPGLLL
Trigger: AAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGGAGTCCTATTCAGGTaGATAGGACTAGAATTGGGA +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAGVLFR*IGLELG
Trigger: TCCCAATTCTAGTCCTATTCACCTGAATAGGACTCC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAGCCATTGCACAGGATaGCTGTACAGGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPSHCTG*LYRRTM
Trigger: CATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGTTAATGGCTTTTTCTaGAGAGCACAAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLVNGFF*RAQEGG
Trigger: TCCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAAC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTTAATGGCTTTTTCTaGAGAGCACAAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVNGFF*RAQEGG
Trigger: TCCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWACWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGGAAGATGGTTGTTTaGAGTGCTGTTGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLWKMVV*SAVGWK
Trigger: TTTCCATCCAACAGCACTTCAAACAACCATCTTCCA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGGAAGATGGTTGTTTaGAGTGCTGTTGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAWKMVV*SAVGWK
Trigger: TTTCCATCCAACAGCACTTCAAACAACCATCTTCCA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSQGVS*KGGSVV
Trigger: CACTACACTTCCACCTTTTCAAGATACACCTTGTGA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACCATCCTTCACCTGTTaGCCAAGAGATGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQPSFTC*PRDGSI
Trigger: GATTGACCCATCTCTTGGTCAACAGGTGAAGGATGG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTCAGCCTACCATCATaGTCAACACCTCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLSLPS*STPPMF
Trigger: GAACATGGGAGGTGTTGATCATGATGGTAGGCTGAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCTGTGTGGCAACTTGCTaGCTTGAAATATTCAAACCC +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETCVATC*LEIFKP
Trigger: GGGTTTGAATATTTCAAGTCAGCAAGTTGCCACACA...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGTGTGGCAACTTGCTaGCTTGAAATATTCAAACCC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGCVATC*LEIFKP
Trigger: GGGTTTGAATATTTCAAGTCAGCAAGTTGCCACACA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGGATATGGCCTGGATaGTCTAAAAATTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAWIWPG*SKNSSY
Trigger: GTACGAGGAATTTTTAGATCATCCAGGCCATATCCA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGGGCTTTGTTGACATaGATTGTGAACGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGALLT*IVNVVF
Trigger: GAAGACGACGTTCACAATTCATGTCAACAAAGCCCC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGGGGCTTTGTTGACATaGATTGTGAACGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIGALLT*IVNVVF
Trigger: GAAGACGACGTTCACAATTCATGTCAACAAAGCCCC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWASLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTTAATTTAGACCTGTaGGCCCTCATCCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLNLDL*ALIPLE
Trigger: TTCTAAAGGGATGAGGGCTCACAGGTCTAAATTAAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTTAATTTAGACCTGTaGGCCCTCATCCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLNLDL*ALIPLE
Trigger: TTCTAAAGGGATGAGGGCTCACAGGTCTAAATTAAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGGCAGTTTGAGGTGCTaGGCCTGCTATTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTGSLRC*ACYWRI
Trigger: GATTCTCCAATAGCAGGCTCAGCACCTCAAACTGCC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAACAAGAGAGACAAAATaGACCTACCCCCAGAACGAA +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWATRETK*TYPQNE
Trigger: TTCGTTCTGGGGGTAGGTTCATTTTGTCTCTCTTGT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTATCATGGTCTAAAATaGAACATGAGTCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVYHGLK*NMSHLV
Trigger: TACGAGGTGACTCATGTTTCATTTTAGACCATGATA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAAATGCTTCTCCAGCATaGCGGTATTATACCTACACA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVNASPA*RYYTYT
Trigger: TGTGTAGGTATAATACCGTCATGCTGGAGAAGCATT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAATGTACATCTTTCCTaGCCCCCACTTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNVHLS*PPLLSA
Trigger: GGCACTCAAAAGTGGGGGGCAGGAAAGATGTACATT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACAGTTAATTTCCAGATaGTCTATGTCTTTACGAGTC +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGQLISR*SMSLRV
Trigger: GACTCGTAAAGACATAGAGCATCTGGAAATTAACTG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATGTGACATCTTCATCTaGCTTAACATCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVCDIFI*LNIFCG
Trigger: ACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGATGTGGGGCTTCCATaGTTTTATGAAGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETDVGLP*FYEVWP
Trigger: TGGCCACACTTCATAAAAGCATGGAAGCCCCACATC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETTTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVQNCYC*YCCYQQ
Trigger: TTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTTCAGTGTTGCCACTaGCGGCAACAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLQCCH*RQQLQN
Trigger: ATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWANPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTGCATTGTGGCAGTaGACGGCTTCCCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFALWQ*TASPLK
Trigger: TTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGATGGAAAATGAAGTaGGTGCTCCTGGCCAACAAA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGWKMK*VLLANK
Trigger: TTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGGTCTTGCTTTGCAGTaGTTAGCAGCTCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIGLALQ*LAALQI
Trigger: GATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATCTAGGACCAGGTCTTaGTTTGCAGTGCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPSRTRS*FAVLSS
Trigger: GCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTTGCAAGGGAACACTaGAAACTGCATGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALAREH*KLHGRL
Trigger: TAATCTTCCATGCAGTTTGCAGTGTTCCCTTGCAAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCACAGGCTGCAATACCTaGCCATCCATGTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTTGCNT*PSMSLE
Trigger: CTCCAGTGACATGGATGGGCAGGTATTGCAGCCTGT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACCAACATTCCTGCCTTaGAACAATTATCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVPTFLP*NNYLEW
Trigger: CCATTCCAGATAATTGTTGCAAGGCAGGAATGTTGG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAATAATTCACCAATGCTaGTACCTGTCTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEIIHQC*YLSEVG
Trigger: CCCCACTTCAGACAGGTACCAGCATTGGTGAATTAT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLYKTH*EASAQF
Trigger: AAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHQRRM*GFHAFM
Trigger: CATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIHQRRM*GFHAFM
Trigger: CATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCCTTGGGGTGGTTTGTaGTGGAACATTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFPWGGL*WNIARG
Trigger: ACCACGAGCAATGTTCCACCACAAACCACCCCAAGG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVTRFYS*QWEITW
Trigger: CCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGATGAGCGTGATCTTTaGGGCGATGCCTCAATCCTT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPDERDL*GDASIL
Trigger: AAGGATTGAGGCATCGCCCCAAAGATCACGCTCATC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATTAAACCTGCAAGATaGTGGTTGGGGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIIKPAR*WLGTGL
Trigger: CAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAAT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTGCCCGCTATGGCTATaGAGGATGATGGTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTCPLWL*RMMVLN
Trigger: GTTCAGGACCATCATCCTCCATAGCCATAGCGGGCA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIENHSQ*VADSAV
Trigger: CACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGGGTTATTGTTAGCTaGGCAAGGAATTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGVIVS*ARNCGL
Trigger: CAGTCCACAATTCCTTGCCCAGCTAACAATAACCCC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATT +
Preference number: 4 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMCILKR*KCSVWI
Trigger: AATCCAAACACTACACTTCCACCTTTTCAAGATACA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATT +
Preference number: 4 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHCILKR*KCSVWI
Trigger: AATCCAAACACTACACTTCCACCTTTTCAAGATACA...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTGTTGACCAAGAGATaGGTCAATCCTCGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILLTKR*VNPRLQ
Trigger: TTGCAACCGAGGATTGACCCATCTCTTGGTCAACAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCAACTGCTTTGTAAATaGCATCTACGGAAGCATCAC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGQLLCK*HLRKHH
Trigger: GTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCTGCATTCCTTTGCTaGCTGCATCGACAACTGCTT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPAFLC*LHRQLL
Trigger: AAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACCTGCATTCCTTTGCTaGCTGCATCGACAACTGCTT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQPAFLC*LHRQLL
Trigger: AAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTCACATTTTTCCCATaGTCTAGATTCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFTFFP*SRFLGS
Trigger: GCTGCCCAAGAATCTAGACCATGGGAAAAATGTGAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGTCAGTCCTTTGATTTaGCCCCAGACCAAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTVSPLI*PQTKSP
Trigger: TGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGAC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCACCCTGTGGGATTTaGTGTACAGTCCCAGACATT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSPCGI*CTVPDI
Trigger: AATGTCTGGGACTGTACACCAAATCCCACAGGGTGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQSSSWV*GVSFVC
Trigger: ACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTACTGTTGAGTTTAGCTaGACCAGGTGTATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETTVEFS*TRCIPS
Trigger: GCTGGGAATACACCTGGTCCAGCTAAACTCAACAGT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGTTTCCAACTTCTTCTaGAGAGAAGTGATGAAAACA +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGVSNFF*REVMKT
Trigger: TGTTTTCATCACTTCTCTCCAGAAGAAGTTGGAAAC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAAGATGGCTTTTATATTaGCATAGACCAAGGACATGT +
Preference number: 4 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGRWLLY*HRPRTC
Trigger: ACATGTCCTTGGTCTATGCCAATATAAAAGCCATCT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRLISY*SWSCCP
Trigger: CGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCAGGATTACTTCTTGTaGAAACATCAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGQDYFL*KHQDFQ
Trigger: TTGGAAGTCCTGATGTTTTCACAAGAAGTAATCCTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGGAGTCCTATTCAGGTaGATAGGACTAGAATTGGGA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIGVLFR*IGLELG
Trigger: TCCCAATTCTAGTCCTATTCACCTGAATAGGACTCC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLMITGF*FTGLLG
Trigger: TCCTAGTAAACCAGTGAATCAGAACCCTGTTATCAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGMITGF*FTGLLG
Trigger: TCCTAGTAAACCAGTGAATCAGAACCCTGTTATCAT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATGCTGGTTCAAGATCTaGTTTAAAGGCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAICWFKI*FKGIPS
Trigger: GCTGGGAATGCCTTTAAATCAGATCTTGAACCAGCA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVNASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAACTGAGACATTGAACTaGTGGGAAATGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAITETLN*WEMNPD
Trigger: GTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCATAGACTGTAGTAACTaGGACATTGAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGIDCSN*DIELMG
Trigger: TCCCATCAGTTCAATGTCTCAGTTACTACAGTCTAT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVTGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCACTATGACGCCATCTTaGAGAACAGATGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGTMTPS*RTDVVF
Trigger: AAAGACAACATCTGTTCTTCAAGATGGCGTCATAGT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCTCAGCCTACCATCATaGTCAACACCTCCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLSLPS*STPPMF
Trigger: GAACATGGGAGGTGTTGATCATGATGGTAGGCTGAG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGGCAACTTGCTGACTTaGAATATTCAAACCCATCTC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAGNLLT*NIQTHL
Trigger: GAGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGTTGGGCCTTTCATaGCAAGGACTACTGTGGATA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETLLGLS*QGLLWI
Trigger: TATCCACAGTAGTCCTTGTCATGAAAGGCCCAACAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCAAGTCGCCAACATTaGACGTCCTTGGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPSRQH*TSLVYN
Trigger: ATTATAGACCAAGGACGTTCAATGTTGGCGACTTGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCACTCATGGCCTCATaGATAGCAGCTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSLMAS*IAASKW
Trigger: CCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTCTCAGTAATCTCTTaGCCATTGATCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFSVIS*PLITLI
Trigger: GATGAGAGTGATCAATGGTCAAGAGATTACTGAGAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTGTTGCTATCAAAAGTaGGCCCAGGTGGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTCCYQK*AQVACS
Trigger: AGAGCATGCCACCTGGGCTCACTTTTGATAGCAACA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTTATAAAAGGTCACTaGGGTACACACACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFIKGH*GTHTVC
Trigger: ACACACTGTGTGTGTACCTCAGTGACCTTTTATAAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACGTTTACATTCGGGTTaGGAAAACCTAAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRLHSG*ENLKGG
Trigger: TCCACCCTTTAGGTTTTCTCAACCCGAATGTAAACG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCGTTTACATTCGGGTTaGGAAAACCTAAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRLHSG*ENLKGG
Trigger: TCCACCCTTTAGGTTTTCTCAACCCGAATGTAAACG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPQGVS*KGGSVV
Trigger: CACTACACTTCCACCTTTTCAAGATACACCTTGTGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATCCAATAATGTAGCCTaGGAAACTGGACAATATGGT +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVSNNVA*ETGQYG
Trigger: ACCATATTGTCCAGTTTCTCAGGCTACATTATTGGA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGTTGACATCCTCTGTTaGCATCTGCCATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTVDILC*HLPWWS
Trigger: TGACCACCATGGCAGATGGCAACAGAGGATGTCAAC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAATCATAATTCACCAATaGTGGTACCTGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVIIIHQ*WYLSEV
Trigger: CACTTCAGACAGGTACCAGCATTGGTGAATTATGAT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATCAAAAGTGGGCCAGTaGAGCACAGTTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPSKVGQ*STVFPR
Trigger: TCTGGGAAAAACTGTGCTGCACTGGCCCACTTTTGA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAACTACTTCCGGCAGATaGAGTAGGAAAAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQTTSGR*SRKSCT
Trigger: AGTGCAGCTTTTCCTACTGCATCTGCCGGAAGTAGT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTCCAGGTTTAGGAACTaGAGAACTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSRFRN*RTIHLR
Trigger: TCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTCCAGGTTTAGGAACTaGAGAACTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSRFRN*RTIHLR
Trigger: TCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAACCCGGGGTACTATTaGTACTCAAGTGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAINPGYY*YSSESF
Trigger: AAAGCTCTCACTTGAGTAGCAATAGTACCCCGGGTT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCATTCCTTTGCTGGCTaGATCGACAACTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHSFAG*IDNCFV
Trigger: TACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGTTGTACTGTTGACTaGAGTGGTGATGACAACCTG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSCTVD*SGDDNL
Trigger: CAGGTTGTCATCACCACTGCAGTCAACAGTACAACT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAGAAATCTGCAAAGTTaGAATTTCCTAGACACCCGA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVARNLQS*NFLDTR
Trigger: TCGGGTGTCTAGGAAATTGCAACTTTGCAGATTTCT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAGAAATCTGCAAAGTTaGAATTTCCTAGACACCCGA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLRNLQS*NFLDTR
Trigger: TCGGGTGTCTAGGAAATTGCAACTTTGCAGATTTCT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAACCTCTGATAATGGTTaGAAAGTGGGGTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWATSDNG*KVGFLP
Trigger: AGGCAAAAACCCCACTTTGCAACCATTATCAGAGGT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGGAAGCCTAAACTTTaGTTAACTGCCTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLWKPKL*LTAWKI
Trigger: TATCTTCCAGGCAGTTAAGCAAAGTTTAGGCTTCCA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATTACTTCATGTGACTaGATGAAGGAACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIITSCD*MKELGR
Trigger: CCTGCCCAGTTCCTTCATGCAGTCACATGAAGTAAT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTATTACTTCATGTGACTaGATGAAGGAACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETITSCD*MKELGR
Trigger: CCTGCCCAGTTCCTTCATGCAGTCACATGAAGTAAT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTATATGCTTGTGACTTaGAAGGGAACACTGCAAACT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAYMLVT*KGTLQT
Trigger: AGTTTGCAGTGTTCCCTTGCAAGTCACAAGCATATA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTGTTGTCTGACTGATTaGTTGGCAAATGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETCCLTD*LANGLV
Trigger: CACCAGACCATTTGCCAAGCAATCAGTCAGACAACA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGAATGGAGCAGTGGCTaGTCCTCCAGAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFEWSSG*SSRKDL
Trigger: CAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATGTTGCCATCTGCCATaGTGGTCATTCCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQCCHLP*WSFLCV
Trigger: AACACAGAGGAATGACCACCATGGCAGATGGCAACA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCGAGAAGGTACTACTaGAGTTGCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPRRYY*SCICSS
Trigger: GGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCATATAGCCTTCCCATaGCATTTGATGATCCAATCA +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGHIAFP*HLMIQS
Trigger: TGATTGGATCATCAAATGCCATGGGAAGGCTATATG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACATATAGCCTTCCCATaGCATTTGATGATCCAATCA +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVHIAFP*HLMIQS
Trigger: TGATTGGATCATCAAATGCCATGGGAAGGCTATATG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCATATAGCCTTCCCATaGCATTTGATGATCCAATCA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAHIAFP*HLMIQS
Trigger: TGATTGGATCATCAAATGCCATGGGAAGGCTATATG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATGGAGTTCTTGTTGTTaGCTTCCAGGCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIWSSCC*LPGSSC
Trigger: ACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCCATCTCCATATATCTaGGAACCTGATGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTPSPYI*EPDDAG
Trigger: CCCAGCGTCATCAGGTTCCCAGATATATGGAGATGG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAATCAGGACTTCCAAGTaGGTCAGTCCTTGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQIRTSK*VSPWRD
Trigger: ATCTCTCCAAGGACTGACCCACTTGGAAGTCCTGAT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCATGATCTGATGATGTaGAAGATGAGCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGHDLMM*KMSVIF
Trigger: AAAGATCACGCTCATCTTCCACATCATCAGATCATG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCATGATCTGATGATGTaGAAGATGAGCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAHDLMM*KMSVIF
Trigger: AAAGATCACGCTCATCTTCCACATCATCAGATCATG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCTGCAAGATGGTGGTTaGGGACTGGACTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLQDGG*GLDCYC
Trigger: ACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAATTAAACCTGCAAGATaGTGGTTGGGGACTGGACTG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPIKPAR*WLGTGL
Trigger: CAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAAT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVALTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGCTAACAATGCTGTTTaGTATCACTGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETANNAV*YHWSGG
Trigger: TCCTCCACTCCAGTGATACCAAACAGCATTGTTAGC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGTTTGAAGTGCTGTTaGATGGAAAATGAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLCLKCC*MENEVR
Trigger: ACGCACTTCATTTTCCATCCAACAGCACTTCAAACA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGTTTGAAGTGCTGTTaGATGGAAAATGAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVACLKCC*MENEVR
Trigger: ACGCACTTCATTTTCCATCCAACAGCACTTCAAACA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTCTCCTGCTGAAGGCTaGAGGATATTTAATAGATTC +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSPAEG*RIFNRF
Trigger: GAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTCTCCTGCTGAAGGCTaGAGGATATTTAATAGATTC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSPAEG*RIFNRF
Trigger: GAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTGCTGTTGCTGATTTaGAGGAAACATCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLLLLI*RKHLIV
Trigger: AACAATCAGATGTTTCCTCCAAATCAGCAACAGCAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTGTTGACCAAGAGATaGGTCAATCCTCGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLLTKR*VNPRLQ
Trigger: TTGCAACCGAGGATTGACCCATCTCTTGGTCAACAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGCCCATCCATGTCACTaGAGAGAAAAGCTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPAHPCH*REKLKQ
Trigger: CTGCTTTAGCTTTTCTCTCCAGTGACATGGATGGGC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATGCTATGGAAACCTCTaGATGATTAGCGGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQCYGNL*MISGVG
Trigger: GCCAACACCGCTAATCATCCAGAGGTTTCCATAGCA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTTTATCTTCCAATCTaGATCCAAGGTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILYLPI*IQGVAG
Trigger: ACCTGCAACACCTTGGATTCAGATTGGAAGATAAAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTATATTACAGAGCATaGTGGCCTTCAAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILYYRA*WPSKVG
Trigger: GCCCACTTTTGAAGGCCATCATGCTCTGTAATATAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPRLISY*SWSCCP
Trigger: CGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTTAATGGCTTTTTCTaGAGAGCACAAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVNGFF*RAQEGG
Trigger: TCCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTCATCATAGGTACCTaGGAGTGGACATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFIIGT*EWTFEW
Trigger: CCATTCAAATGTCCACTCTCAGGTACCTATGATGAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCAGCAAGTTTGTTTTaGTTTGCTAGCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPASLF*FASCAL
Trigger: CAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWANASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCCATTTGAGACTGTCTaGGCAAACTCAACACTGTCG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTPFETV*ANSTLS
Trigger: CGACAGTGTTGAGTTTGCTCAGACAGTCTCAAATGG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAACTATGACGCCATCTTaGAGAACAGATGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWATMTPS*RTDVVF
Trigger: AAAGACAACATCTGTTCTTCAAGATGGCGTCATAGT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSQGVS*KGGSVV
Trigger: CACTACACTTCCACCTTTTCAAGATACACCTTGTGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATGGATATGGCCTGGATaGTCTAAAAATTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIWIWPG*SKNSSY
Trigger: GTACGAGGAATTTTTAGATCATCCAGGCCATATCCA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCAAGTCGCCAACATTaGACGTCCTTGGTCTATAAT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPSRQH*TSLVYN
Trigger: ATTATAGACCAAGGACGTTCAATGTTGGCGACTTGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTTAATTTAGACCTGTaGGCCCTCATCCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILNLDL*ALIPLE
Trigger: TTCTAAAGGGATGAGGGCTCACAGGTCTAAATTAAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAATGCATATATGCTTGTaGCTTGCAAGGGAACACTGC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPMHICL*LAREHC
Trigger: GCAGTGTTCCCTTGCAAGTCACAAGCATATATGCAT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGCTTTTTGGCTCACTaGTTTAATATTCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGCFLAH*FNIHFW
Trigger: CCAGAAGTGAATATTAAATCAGTGAGCCAAAAAGCA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTCCTTAATGGTGGCTaGAGAGATACAATAGATTTG +
Preference number: 4 (lower is better)
Translates to: LLSATKTCGLECFSSMTVFLNGG*RDTIDL
Trigger: CAAATCTATTGTATCTCTTCAGCCACCATTAAGGAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCAGTTAATTTCCAGATaGTCTATGTCTTTACGAGTC +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLQLISR*SMSLRV
Trigger: GACTCGTAAAGACATAGAGCATCTGGAAATTAACTG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAATCATAATTCACCAATaGTGGTACCTGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAIIIHQ*WYLSEV
Trigger: CACTTCAGACAGGTACCAGCATTGGTGAATTATGAT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTTGTGGTGGAACATTaGTCGTGGTATTTCCATATT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAFVVEH*SWYFHI
Trigger: AATATGGAAATACCACGAGCAATGTTCCACCACAAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIQNCYC*YCCYQQ
Trigger: TTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETQNCYC*YCCYQQ
Trigger: TTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGATGGTTGTTTGAAGTaGTGTTGGATGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVADGCLK*CWMENE
Trigger: TTCATTTTCCATCCAACAGCACTTCAAACAACCATC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGATGGTTGTTTGAAGTaGTGTTGGATGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLDGCLK*CWMENE
Trigger: TTCATTTTCCATCCAACAGCACTTCAAACAACCATC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGTTGACTATAACCATCCCCTCTTCATTTTATGCTCCAGAAGCTTGTGAGACCGATGGTTGTTTGAAGTaGTGTTGGATGGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: LLTITIPSSFYAPEACETDGCLK*CWMENE
Trigger: TTCATTTTCCATCCAACAGCACTTCAAACAACCATC...GGTCTCACAAGCTTCTGGAGCATAAAATGAAGAGGGGATGGTTATAGTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGGCTGCATCGACAACTaGTTTGTAAATGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQGCIDN*FVNGIY
Trigger: GTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATTCCCATTTATGTGTaGACATCTTTCCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLIPIYV*TSFHSV
Trigger: AACACTGTGGAAAGATGTGCACACATAAATGGGAAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTACCTCTGATAATGGTTaGAAAGTGGGGTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETTSDNG*KVGFLP
Trigger: AGGCAAAAACCCCACTTTGCAACCATTATCAGAGGT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAGTTTATTCTCCTTGTaGTTCCTAGGACTGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWASLFSL*FLGLLR
Trigger: CCTTAACAGTCCTAGGAAGCACAAGGAGAATAAACT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFHQRRM*GFHAFM
Trigger: CATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTHQRRM*GFHAFM
Trigger: CATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEFYSWQ*EITWQR
Trigger: CCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCAACACTGTCGTAGGTaGTTGTTTTCTTTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETQHCRR*LFSFPQ
Trigger: TTGCGGAAAAGAAAACAACCACCTACGACAGTGTTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAAAGGGGTGTGGAAGATaGTTGTTTGAAGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQKGCGR*LFEVLL
Trigger: CAACAGCACTTCAAACAACCATCTTCCACACCCCTT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATCTCCTGCTGAAGGCTaGAGGATATTTAATAGATTC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWASPAEG*RIFNRF
Trigger: GAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTGGAAGTGTAGTGTTTaGATTCTCAGGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETWKCSV*ILRKCC
Trigger: ACAGCACTTCCTGAGAATCCAAACACTACACTTCCA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCTTGTACTTTACAATaGCTCACAGTTTTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPCTLQ*LTVLGL
Trigger: CAAACCTAAAACTGTGAGCCATTGTAAAGTACAAGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCTTGTACTTTACAATaGCTCACAGTTTTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPCTLQ*LTVLGL
Trigger: CAAACCTAAAACTGTGAGCCATTGTAAAGTACAAGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAAAGAAATGGCTCTATaGGCAAAATTGAAGTGCGAG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAKEMAL*AKLKCE
Trigger: CTCGCACTTCAATTTTGCCCATAGAGCCATTTCTTT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGCCCATCCATGTCACTaGAGAGAAAAGCTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTAHPCH*REKLKQ
Trigger: CTGCTTTAGCTTTTCTCTCCAGTGACATGGATGGGC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAATTCAAGGTTGAAGTaGGGTAGAATTAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWANSRLK*GRISVL
Trigger: CAGGACACTAATTCTACCCCACTTCAACCTTGAATT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTTTATCTTCCAATCTaGATCCAAGGTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLYLPI*IQGVAG
Trigger: ACCTGCAACACCTTGGATTCAGATTGGAAGATAAAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACAGGATTACTTCTTGTaGAAACATCAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIQDYFL*KHQDFQ
Trigger: TTGGAAGTCCTGATGTTTTCACAAGAAGTAATCCTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGTTAATGGCTTTTTCTaGAGAGCACAAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPVNGFF*RAQEGG
Trigger: TCCACCTTCTTGTGCTCTTCAGAAAAAGCCATTAAC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETMITGF*FTGLLG
Trigger: TCCTAGTAAACCAGTGAATCAGAACCCTGTTATCAT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTCATCATAGGTACCTaGGAGTGGACATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPFIIGT*EWTFEW
Trigger: CCATTCAAATGTCCACTCTCAGGTACCTATGATGAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAATGCGTCTTTTTGCTaGGACATCAGCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNASFC*DISLSL
Trigger: AAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTATAGACTGTAGTAACTaGGACATTGAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETIDCSN*DIELMG
Trigger: TCCCATCAGTTCAATGTCTCAGTTACTACAGTCTAT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETTGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAITGLLL*TKLVFA
Trigger: TGCAAACACTAACTTTGTTCACAGTAACAGTCCAGT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTAGGAGATGCTGTTaGTTCACTGGCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFRRCC*FTGKEI
Trigger: TATCTCTTTGCCAGTGAATCAACAGCATCTCCTAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGGCAACTTGCTGACTTaGAATATTCAAACCCATCTC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQGNLLT*NIQTHL
Trigger: GAGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCACAAGAGAGACAAAATaGACCTACCCCCAGAACGAA +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTTRETK*TYPQNE
Trigger: TTCGTTCTGGGGGTAGGTTCATTTTGTCTCTCTTGT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACTCTATGGGCAAAATTaGAGTGCGAGTGACCAATTT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQLYGQN*SASDQF
Trigger: AAATTGGTCACTCGCACTTCAATTTTGCCCATAGAG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTGAATCCAAGGTGTTaGAGGTTGGTTCATCTGATG +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLNPRC*RLVHLM
Trigger: CATCAGATGAACCAACCTGCAACACCTTGGATTCAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATCATAATTCACCAATaGTGGTACCTGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIIIIHQ*WYLSEV
Trigger: CACTTCAGACAGGTACCAGCATTGGTGAATTATGAT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTATCATAATTCACCAATaGTGGTACCTGTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETIIIHQ*WYLSEV
Trigger: CACTTCAGACAGGTACCAGCATTGGTGAATTATGAT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATGTGACATCTTCATCTaGCTTAACATCTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQCDIFI*LNIFCG
Trigger: ACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTTGTGGTGGAACATTaGTCGTGGTATTTCCATATT +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEFVVEH*SWYFHI
Trigger: AATATGGAAATACCACGAGCAATGTTCCACCACAAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQNCYC*YCCYQQ
Trigger: TTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTQQLQN*YCCYCC
Trigger: ACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCCAGGTTTAGGAACTaGAGAACTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSRFRN*RTIHLR
Trigger: TCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTGGGATCTGTAAAATaGAGCTGGTTAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLGSVK*SWLAEQ
Trigger: TTGCTCTGCTAACCAGCTGCATTTTACAGATCCCAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR GCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAGTTGTACTGTTGACTaGAGTGGTGATGACAACCTG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTSCTVD*SGDDNL
Trigger: CAGGTTGTCATCACCACTGCAGTCAACAGTACAACT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGGGAACACTGCAAACTaGATGGAAGATTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQGNTAN*MEDYQS
Trigger: ACTTTGGTAATCTTCCATGCAGTTTGCAGTGTTCCC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACTTGCAAGGGAACACTaGAAACTGCATGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQLAREH*KLHGRL
Trigger: TAATCTTCCATGCAGTTTGCAGTGTTCCCTTGCAAG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTATATGCTTGTGACTTaGAAGGGAACACTGCAAACT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETYMLVT*KGTLQT
Trigger: AGTTTGCAGTGTTCCCTTGCAAGTCACAAGCATATA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGCTCTTCTTGATTTCTaGTATTTATTTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEALLDF*YLFPWS
Trigger: GGACCAAGGAAATAAATACCAGAAATCAAGAAGAGC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAATAATGTAGCCTTCTaGAGAGAAGTGATGAAAACA +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVANNVAF*REVMKT
Trigger: TGTTTTCATCACTTCTCTCCAGAAGGCTACATTATT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCATATAGCCTTCCCATaGCATTTGATGATCCAATCA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHIAFP*HLMIQS
Trigger: TGATTGGATCATCAAATGCCATGGGAAGGCTATATG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTGGAGTTCTTGTTGTTaGCTTCCAGGCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTWSSCC*LPGSSC
Trigger: ACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETFYSWQ*EITWQR
Trigger: CCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFYSWQ*EITWQR
Trigger: CCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPTRFYS*QWEITW
Trigger: CCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCATGATCTGATGATGTaGAAGATGAGCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHDLMM*KMSVIF
Trigger: AAAGATCACGCTCATCTTCCACATCATCAGATCATG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETLTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAILTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTCTCCTGCTGAAGGCTaGAGGATATTTAATAGATTC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETSPAEG*RIFNRF
Trigger: GAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATCTCCTGCTGAAGGCTaGAGGATATTTAATAGATTC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAISPAEG*RIFNRF
Trigger: GAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCTGCTGTTGCTGATTTaGAGGAAACATCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETLLLLI*RKHLIV
Trigger: AACAATCAGATGTTTCCTCCAAATCAGCAACAGCAG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATT +
Preference number: 4 (lower is better)
Translates to: PVVVVAICHSLNIDITVACILKR*KCSVWI
Trigger: AATCCAAACACTACACTTCCACCTTTTCAAGATACA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATT +
Preference number: 4 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGCILKR*KCSVWI
Trigger: AATCCAAACACTACACTTCCACCTTTTCAAGATACA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACAACTGCTTTGTAAATaGCATCTACGGAAGCATCAC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQQLLCK*HLRKHH
Trigger: GTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATTCACATTTTTCCCATaGTCTAGATTCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQFTFFP*SRFLGS
Trigger: GCTGCCCAAGAATCTAGACCATGGGAAAAATGTGAA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTCCCCAGGCAGAAATaGCAGTGTAGAGACATTGTT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTFPRQK*QCRDIV
Trigger: AACAATGTCTCTACACTGCCATTTCTGCCTGGGGAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAATCTGCTTCAACAGGTaGCTATCAAATGTTAACTAC +
Preference number: 4 (lower is better)
Translates to: TTLKSLESCITPFGHKWAICFNR*LSNVNY
Trigger: GTAGTTAACATTTGATAGCCACCTGTTGAAGCAGAT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCACACCTCCCAACAGCTaGGGATTCAAGGTCATTAAT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTTPPNS*GFKVIN
Trigger: ATTAATGACCTTGAATCCCCAGCTGTTGGGAGGTGT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTTGCAACAATTATCTaGAATGGAGCAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLATII*NGAVAA
Trigger: AGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACAAAAGCTAGGGAGATaGCTTTTATATTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEQKLGR*LLYWHR
Trigger: TCTATGCCAATATAAAAGCCATCTCCCTAGCTTTTG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGCTGGAAGCCCCCTATaGGATAAGTATACTGTTAGA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFAGSPL*DKYTVR
Trigger: TCTAACAGTATACTTATCCCATAGGGGGCTTCCAGC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGCAGGTTGGTTCATCTaGTGTTTTCATGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQAGWFI*CFHDFK
Trigger: TTTGAAGTCATGAAAACATCAGATGAACCAACCTGC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCTTTATCTTCCAATCTaGATCCAAGGTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLYLPI*IQGVAG
Trigger: ACCTGCAACACCTTGGATTCAGATTGGAAGATAAAG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGAATTGGGAGCTCCATaGAAACCAGGATTACTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFELGAP*KPGLLL
Trigger: AAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTCATCATAGGTACCTaGGAGTGGACATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTFIIGT*EWTFEW
Trigger: CCATTCAAATGTCCACTCTCAGGTACCTATGATGAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTTCATCATAGGTACCTaGGAGTGGACATTTGAATGG +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFFIIGT*EWTFEW
Trigger: CCATTCAAATGTCCACTCTCAGGTACCTATGATGAA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAATAGACTGTAGTAACTaGGACATTGAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQIDCSN*DIELMG
Trigger: TCCCATCAGTTCAATGTCTCAGTTACTACAGTCTAT...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTTAGGAGATGCTGTTaGTTCACTGGCAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPFRRCC*FTGKEI
Trigger: TATCTCTTTGCCAGTGAATCAACAGCATCTCCTAAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTGTGTGGCAACTTGCTaGCTTGAAATATTCAAACCC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTCVATC*LEIFKP
Trigger: GGGTTTGAATATTTCAAGTCAGCAAGTTGCCACACA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAATGGATGTAGTCTTTaGCCAGAGAATTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAINGCSL*PENFPN
Trigger: GTTTGGAAAATTCTCTGGTCAAAGACTACATCCATT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCTTAATTTAGACCTGTaGGCCCTCATCCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLNLDL*ALIPLE
Trigger: TTCTAAAGGGATGAGGGCTCACAGGTCTAAATTAAG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAACCAACTTAAGGAATaGCCTTGGTCTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTNQLKE*PWSPFS
Trigger: GGAAAATGGAGACCAAGGTCATTCCTTAAGTTGGTT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGAGGGAAGCACAAACTaGATTAGCTCAAAATACCAA +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPEGSTN*ISSKYQ
Trigger: TTGGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACAGTTAATTTCCAGATaGTCTATGTCTTTACGAGTC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIQLISR*SMSLRV
Trigger: GACTCGTAAAGACATAGAGCATCTGGAAATTAACTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTGTGGTGGAACATTaGTCGTGGTATTTCCATATT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFVVEH*SWYFHI
Trigger: AATATGGAAATACCACGAGCAATGTTCCACCACAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTTGTGGTGGAACATTaGTCGTGGTATTTCCATATT +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETFVVEH*SWYFHI
Trigger: AATATGGAAATACCACGAGCAATGTTCCACCACAAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTGGTGGTAGCTATCTaGCATAGTCTAAATATTGAT +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVVVAI*HSLNID
Trigger: ATCAATATTTAGACTATGGCAGATAGCTACCACCAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCACCTCTGATAATGGTTaGAAAGTGGGGTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTTSDNG*KVGFLP
Trigger: AGGCAAAAACCCCACTTTGCAACCATTATCAGAGGT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATGGAAGCCTAAACTTTaGTTAACTGCCTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQWKPKL*LTAWKI
Trigger: TATCTTCCAGGCAGTTAAGCAAAGTTTAGGCTTCCA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGCTCTTCTTGATTTCTaGTATTTATTTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIALLDF*YLFPWS
Trigger: GGACCAAGGAAATAAATACCAGAAATCAAGAAGAGC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLYKTH*EASAQF
Trigger: AAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQFYSWQ*EITWQR
Trigger: CCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTTRFYS*QWEITW
Trigger: CCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACATGATCTGATGATGTaGAAGATGAGCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQHDLMM*KMSVIF
Trigger: AAAGATCACGCTCATCTTCCACATCATCAGATCATG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACTGCTGTTGCTGATTTaGAGGAAACATCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQLLLLI*RKHLIV
Trigger: AACAATCAGATGTTTCCTCCAAATCAGCAACAGCAG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCACAGAGACTTTGATTaGCTTTTCCAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHRDFD*LFQHSL
Trigger: TAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAATCTGCTTCAACAGGTaGCTATCAAATGTTAACTAC +
Preference number: 4 (lower is better)
Translates to: VVVVAICHSLNIDITVAIICFNR*LSNVNY
Trigger: GTAGTTAACATTTGATAGCCACCTGTTGAAGCAGAT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTATCTGCTTCAACAGGTaGCTATCAAATGTTAACTAC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETICFNR*LSNVNY
Trigger: GTAGTTAACATTTGATAGCCACCTGTTGAAGCAGAT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTACACTGCAAACTGCATaGAAGATTACCAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETTLQTA*KITKVN
Trigger: GTTAACTTTGGTAATCTTCCATGCAGTTTGCAGTGT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTAAACCCTGCCTCGTATaGCTTATTTTGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFKPCLV*LILQFG
Trigger: TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTAGCAACAAAGACATGTaGGTTAGAATGCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFSNKDM*VRMLLQ
Trigger: CTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCAGGATTACTTCTTGTaGAAACATCAGGACTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFQDYFL*KHQDFQ
Trigger: TTGGAAGTCCTGATGTTTTCACAAGAAGTAATCCTG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFMITGF*FTGLLG
Trigger: TCCTAGTAAACCAGTGAATCAGAACCCTGTTATCAT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTATAGACTGTAGTAACTaGGACATTGAACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFIDCSN*DIELMG
Trigger: TCCCATCAGTTCAATGTCTCAGTTACTACAGTCTAT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR TCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAATGGATGTAGTCTTTaGCCAGAGAATTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPNGCSL*PENFPN
Trigger: GTTTGGAAAATTCTCTGGTCAAAGACTACATCCATT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGAGGGAAGCACAAACTaGATTAGCTCAAAATACCAA +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTEGSTN*ISSKYQ
Trigger: TTGGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR TCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATGTTACAGCACTGTATaGCCTGTAATGCTAACAATA +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQCYSTV*PVMLTI
Trigger: TATTGTTAGCATTACAGGTCATACAGTGCTGTAACA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAGTTAATTTCCAGATaGTCTATGTCTTTACGAGTC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQLISR*SMSLRV
Trigger: GACTCGTAAAGACATAGAGCATCTGGAAATTAACTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR GCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATTTGTGGTGGAACATTaGTCGTGGTATTTCCATATT +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQFVVEH*SWYFHI
Trigger: AATATGGAAATACCACGAGCAATGTTCCACCACAAA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR GCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTCCAGGTTTAGGAACTaGAGAACTATCCATTTGAGA +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFSRFRN*RTIHLR
Trigger: TCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGCTCTTCTTGATTTCTaGTATTTATTTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQALLDF*YLFPWS
Trigger: GGACCAAGGAAATAAATACCAGAAATCAAGAAGAGC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAATAATGTAGCCTTCTaGAGAGAAGTGATGAAAACA +
Preference number: 4 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNNVAF*REVMKT
Trigger: TGTTTTCATCACTTCTCTCCAGAAGGCTACATTATT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCATGATCTGATGATGTaGAAGATGAGCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFHDLMM*KMSVIF
Trigger: AAAGATCACGCTCATCTTCCACATCATCAGATCATG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTGACTGAGGTGGATTaGGATGTAAGGAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLTEVD*DVRNFL
Trigger: TAGGAAATTCCTTACATCCCAATCCACCTCAGTCAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAATCTGCTTCAACAGGTaGCTATCAAATGTTAACTAC +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPICFNR*LSNVNY
Trigger: GTAGTTAACATTTGATAGCCACCTGTTGAAGCAGAT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CCA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCTTGTACTTTACAATaGCTCACAGTTTTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPCTLQ*LTVLGL
Trigger: CAAACCTAAAACTGTGAGCCATTGTAAAGTACAAGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR TCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAATGGATGTAGTCTTTaGCCAGAGAATTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTNGCSL*PENFPN
Trigger: GTTTGGAAAATTCTCTGGTCAAAGACTACATCCATT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CCA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGCTCTTCTTGATTTCTaGTATTTATTTCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCKVYNGREAQTELAQNTALLDF*YLFPWS
Trigger: GGACCAAGGAAATAAATACCAGAAATCAAGAAGAGC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS CCA 90 bp AGTGGAGGAGGAGGAGGCGAAGGAGGAGGAGGAGAGCTGGGGAAGTaGCTGCTCCTGGGTGTAGTGAGATGTCTCCAGCCAGGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SGGGGGEGGGGELGK*LLLGVVRCLQPGPS
Trigger: GCTTGGCCCTGGCTGGAGACATCTCACTACACCCAGGAGCAGCCACTTCCCCAGCTCTCCTCCTCCTCCTTCGCCTCCTCCTCCTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000470063.5
ENST00000473478.5
ENST00000478190.3
ENST00000635796.1
ENST00000637308.1
ENST00000637997.1
ENST00000638043.2
ENST00000638130.1
ENST00000642680.2
CDS CCA 90 bp CCATATATCTGGGAACCTGATGACGCTGGGCTGGGCAGGCCTCCATaGCTGCCACGGAATGGAGATTTCTGTCCATGTTCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PYIWEPDDAGLGRPP*LPRNGDFCPCSLLP
Trigger: GGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAGGTTCCCAGATATATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp GTGGTAGTGGTTGCCTGGGAGGAGGTTGCTATGGAAACCTCTGGATaGTTAGCGGTGTTGGCCGATGCCGAGTTCAGGACACCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: VVVVAWEEVAMETSG*LAVLADAEFRTPPN
Trigger: GTTGGGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCTAATCATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCAACCACTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS CCA 90 bp CCAAGTGGGTCAGTCCTTGGAGAGATTGAACCATCTCCATATATCTaGGAACCTGATGACGCTGGGCTGGGCAGGCCTCCATGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSGSVLGEIEPSPYI*EPDDAGLGRPPWLP
Trigger: TGGCAGCCATGGAGGCCTGCCCAGCCCAGCGTCATCAGGTTCCCAGATATATGGAGATGGTTCAATCTCTCCAAGGACTGACCCACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TTAGCGGTGTTGGCCGATGCCGAGTTCAGGACACCTCCCAACAGCTaGGGATTCAAGGTCATTAATCCTGAGGCCCCATTGACAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LAVLADAEFRTPPNS*GFKVINPEAPLTAG
Trigger: CCCAGCTGTCAATGGGGCCTCAGGATTAATGACCTTGAATCCCCAGCTGTTGGGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS CCA 90 bp GGTTGTGGTAGTGGTTGCCTGGGAGGAGGTTGCTATGGAAACCTCTaGATGATTAGCGGTGTTGGCCGATGCCGAGTTCAGGACACCTCC +
Preference number: 5 (lower is better)
Translates to: GCGSGCLGGGCYGNL*MISGVGRCRVQDTS
Trigger: GGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCTAATCATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCAACCACTACCACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGGGCCTTGGGGTGGTTaGTGGTGGAACATTGCTCGT +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGGPWGG*WWNIAR
Trigger: ACGAGCAATGTTCCACCACAAACCACCCCAAGGCCC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACCATGGTCTAGATTCTaGGGCAGCCGAGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGPWSRF*GSRAPL
Trigger: AAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS GCA 90 bp GGCCTCCATGGCTGCCACGGAATGGAGATTTCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGGGGTAGACAGGGTGGAGTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: GLHGCHGMEISVHVH*CPISVGGRQGGVLV
Trigger: AACAAGAACTCCACCCTGTCTACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAGCCATGGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACTACTGGAGTTGCATTaGTTCCTCCTCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGLLELH*FLLRDW
Trigger: CCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGAGGGGGAGGTGGGCCTaGGGGTGGTTTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVRGRWA*GWFVVE
Trigger: TTCCACCACAAACCACCCCAAGGCCCACCTCCCCCT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp GCGTGCTCCTGGCCAACAAAAGGAAAATCACTCCCAATGGGTAGCTaGCTCTGCAGTGGGTTTCCAGCTGCAGTGGTGACTATGACGCCA +
Preference number: 5 (lower is better)
Translates to: ACSWPTKGKSLPMGS*LCSGFPAAVVTMTP
Trigger: TGGCGTCATAGTCACCACTGCAGCTGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTCCTTTTGTTGGCCAGGAGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp GAAGCATCACCTGGGCCACCCACAACGAGGCCATCCTTCACCTGTTaGCCAAGAGATGGGTCAATCCTCGGTTGCAACTCACAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: EASPGPPTTRPSFTC*PRDGSILGCNSQGV
Trigger: TACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGGTGATGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp GGAGGTTGCTATGGAAACCTCTGGATGATTAGCGGTGTTGGCCGATaGCGAGTTCAGGACACCTCCCAACAGCTGGGGATTCAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: GGCYGNLWMISGVGR*RVQDTSQQLGIQGH
Trigger: ATGACCTTGAATCCCCAGCTGTTGGGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCTAATCATCCAGAGGTTTCCATAGCAACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 90 bp ACTCTGTTGCTCAGCACAGAGTCCAGTGGCATGATCATGGCTCACTaGAGCCTCAACCTGAGTTCAAGAGATCCTCTCCAGCCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: TLLLSTESSGMIMAH*SLNLSSRDPLQPPE
Trigger: CTCAGGAGGCTGGAGAGGATCTCTTGAACTCAGGTTGAGGCTGCAGTGAGCCATGATCATGCCACTGGACTCTGTGCTGAGCAACAGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS GCA 90 bp GAGCAGTGGCTGCTCCTCCAGAAAGGATTTGGCGCTCCAGTTCACTaGAATAGCTTCCTGCTTCATTCCCATCAGCCTGGCCTCTATAGG +
Preference number: 5 (lower is better)
Translates to: EQWLLLQKGFGAPVH*NSFLLHSHQPGLYR
Trigger: CCTATAGAGGCCAGGCTGATGGGAATGAAGCAGGAAGCTATTGCAGTGAACTGGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGTACCCCTGGAGAAGTaGCTGCTGTTGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGVPLEK*LLLLIW
Trigger: CCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTAC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGTCACCCTGTGGGATTaGGTGTACAGTCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGVTLWD*VYSPRH
Trigger: ATGTCTGGGACTGTACACCAAATCCCACAGGGTGAC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS TCA 90 bp CTCTGCAGTGGGTTTCCAGCTGCAGTGGTGACTATGACGCCATCTTaGAGAACAGATGTTGTCTTTGTGATGGCAGGGTGGTTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LCSGFPAAVVTMTPS*RTDVVFVMAGWLVP
Trigger: GGGCACCAACCACCCTGCCATCACAAAGACAACATCTGTTCTTCAAGATGGCGTCATAGTCACCACTGCAGCTGGAAACCCACTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp CTCCATGGCTGCCACGGAATGGAGATTTCTGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGTAGACAGGGTGGAGTTCTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: LHGCHGMEISVHVHC*PISVGGRQGGVLVV
Trigger: AACAACAAGAACTCCACCCTGTCTACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAGCCATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp GGCACTCAGAGCTGGAATGGGGCTGATCTGAGTTGTACTGTTGACTaGAGTGGTGATGACAACCTGCATTCCTTTGCTGGCTGCATCGAC +
Preference number: 5 (lower is better)
Translates to: GTQSWNGADLSCTVD*SGDDNLHSFAGCID
Trigger: GTCGATGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCACTGCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCTCTGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp AGGAACTTGGAGACTGCTCCTCTAGGACCAGGTCTTGCTTTGCAGTaGTTAGCAGCTCTCCAAATCCCCGACTCTGTCGAGGTCTATTCC +
Preference number: 5 (lower is better)
Translates to: RNLETAPLGPGLALQ*LAALQIPDSVEVYS
Trigger: GGAATAGACCTCGACAGAGTCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp ATTTTGATCCACACGACGCTGCCAACCCACAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTCCCCTCCGTCACACTCTTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: ILIHTTLPTHRNLYS*KTSFLVPSVTLFAS
Trigger: GGAGGCAAAGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGGTTGGCAGCGTCGTGTGGATCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp CAACCTGCATTCCTTTGCTGGCTGCATCGACAACTGCTTTGTAAATaGCATCTACGGAAGCATCACCTGGGCCACCCACAACGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: QPAFLCWLHRQLLCK*HLRKHHLGHPQRGH
Trigger: ATGGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVGRPPS*SPPSHS
Trigger: AGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASGRPPS*SPPSHS
Trigger: AGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCCTACTGGAGTTGCATTaGTTCCTCCTCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMALLELH*FLLRDW
Trigger: CCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAG...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGGGCCTTGGGGTGGTTaGTGGTGGAACATTGCTCGT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASGPWGG*WWNIAR
Trigger: ACGAGCAATGTTCCACCACAAACCACCCCAAGGCCC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGGGCCTTGGGGTGGTTaGTGGTGGAACATTGCTCGT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVGPWGG*WWNIAR
Trigger: ACGAGCAATGTTCCACCACAAACCACCCCAAGGCCC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGCTGCTCGACCACTTaGCCCTTCACCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCCSTT*PFTCWE
Trigger: CTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCATGGTCTAGATTCTaGGGCAGCCGAGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPWSRF*GSRAPL
Trigger: AAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCTGAGTGGCAGACTGTaGTGTGAGCCCCAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLSGRL*CEPQAR
Trigger: TCTAGCCTGGGGCTCACACAACAGTCTGCCACTCAG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS TCA 90 bp GCAGTGAAGGCACTCATGGCACTCAGAGCTGGAATGGGGCTGATCTaGGTTGTACTGTTGACTGCAGTGGTGATGACAACCTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: AVKALMALRAGMGLI*VVLLTAVVMTTCIP
Trigger: AGGAATGCAGGTTGTCATCACCACTGCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATGAGTGCCTTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp AGTGGTGATGACAACCTGCATTCCTTTGCTGGCTGCATCGACAACTaGTTTGTAAATGGCATCTACGGAAGCATCACCTGGGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: SGDDNLHSFAGCIDN*FVNGIYGSITWATH
Trigger: GTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TGGGCCACCCACAACGAGGCCATCCTTCACCTGTTGACCAAGAGATaGGTCAATCCTCGGTTGCAACTCACAAGGTGTATCTTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: WATHNEAILHLLTKR*VNPRLQLTRCILKR
Trigger: CCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TGCATCGACAACTGCTTTGTAAATGGCATCTACGGAAGCATCACCTaGGCCACCCACAACGAGGCCATCCTTCACCTGTTGACCAAGAGA +
Preference number: 5 (lower is better)
Translates to: CIDNCFVNGIYGSIT*ATHNEAILHLLTKR
Trigger: TCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTTGGGGACCCTATTGTaGACCTTGGTGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLGTLL*TLVTWV
Trigger: CACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTGCTGCTCGACCACTTaGCCCTTCACCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMCCSTT*PFTCWE
Trigger: CTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACACTGTCGTAGGTGGTaGTTTTCTTTTCCGCAATGC +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGHCRRW*FSFPQC
Trigger: GCATTGCGGAAAAGAAAACAACCACCTACGACAGTG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGTGATGGCAGGGTGGTaGGTGCCCGCTATGGCTATG +
Preference number: 5 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSVMAGW*VPAMAM
Trigger: CATAGCCATAGCGGGCACCAACCACCCTGCCATCAC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGGGTGTGGAAGATGGTaGTTTGAAGTGCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGGCGRW*FEVLLD
Trigger: ATCCAACAGCACTTCAAACAACCATCTTCCACACCC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGTGCTGAGCCTGCTATaGGAGAATCTCCTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVVLSLL*ENLLAA
Trigger: GGCTGCTAGGAGATTCTCCAATAGCAGGCTCAGCAC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS CCA 90 bp GGTAACACTAGGCCAACATTCCTGCCTTGCAACAATTATCTGGAATaGAGCAGTGGCTGCTCCTCCAGAAAGGATTTGGCGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GNTRPTFLPCNNYLE*SSGCSSRKDLALQF
Trigger: GAACTGGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAGGAATGTTGGCCTAGTGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACCAAGGTGTTGCAGGTaGGTTCATCTGATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGPRCCR*VHLMFS
Trigger: TGAAAACATCAGATGAACCAACCTGCAACACCTTGG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEGRPPS*SPPSHS
Trigger: AGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCC...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGACAGGGTGGAGTTCTaGTTGTTGGCTTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMDRVEF*LLASRQ
Trigger: CTGCCTGGAAGCCAACAACAAGAACTCCACCCTGTC...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCCAAGTGGGTCAGTCCTaGGAGAGATTGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAQVGQS*ERLNHL
Trigger: GAGATGGTTCAATCTCTCCAAGGACTGACCCACTTG...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAGGGGGAGGTGGGCCTaGGGGTGGTTTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGRGRWA*GWFVVE
Trigger: TTCCACCACAAACCACCCCAAGGCCCACCTCCCCCT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGCCTTGGGGACCCTATaGTTGACCTTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVALGTL*LTLVTW
Trigger: CCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATG +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASVGRSM*AVGGNM
Trigger: CATGTTCCCTCCTACTGCCAACATGCTTCTCCCAAC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGATGCTGCTCGACCACTTaGCCCTTCACCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGCCSTT*PFTCWE
Trigger: CTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCA...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGTGGAAGATGGTTGTTaGAAGTGCTGTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGVEDGC*KCCWME
Trigger: TTCCATCCAACAGCACTTCAAACAACCATCTTCCAC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCGCCATCCTTCACCTGTaGACCAAGAGATGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAAILHL*TKRWVN
Trigger: ATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGC...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCGCAGCCGAGCCCCTCTaGAATTCCTCAGCCTACCAT +
Preference number: 5 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVAAEPL*NSSAYH
Trigger: ATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGC...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAACCATGGTCTAGATTCTaGGGCAGCCGAGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEPWSRF*GSRAPL
Trigger: AAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGG...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAACTATTTGAGGAACTaGGAGACTGCTCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGNYLRN*ETAPLG
Trigger: TCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAAGTCAGTCCTTTGATTaGGCCCCAGACCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASSQSFD*APDQVA
Trigger: GGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACT...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAG +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVQEVSP*IWPQTK
Trigger: CTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAGGTTGATCTCAGACTaGCCTTCTCCTGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASRLISD*PSPAEG
Trigger: GCCTTCAGCAGGAGAAGGCAAGTCTGAGATCAACCT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 90 bp AAACTATTTGAGGAACTTGGAGACTGCTCCTCTAGGACCAGGTCTTaGTTTGCAGTGCTTAGCAGCTCTCCAAATCCCCGACTCTGTCGA +
Preference number: 5 (lower is better)
Translates to: KLFEELGDCSSRTRS*FAVLSSSPNPRLCR
Trigger: TCGACAGAGTCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp AGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTaGGGGGTCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACCT +
Preference number: 5 (lower is better)
Translates to: SGVVSVIWRSSSSWV*GVSFVCHPVGFGVP
Trigger: AGGTACACCAAATCCCACAGGGTGACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630352.1
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACTACTGGAGTTGCATTaGTTCCTCCTCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLLELH*FLLRDW
Trigger: CCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTACTGGAGTTGCATTaGTTCCTCCTCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLLELH*FLLRDW
Trigger: CCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGGTGGAGTTCTTGTTGTaGGCTTCCAGGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVVEFLL*ASRQFL
Trigger: CAAGAACTGCCTGGAAGCCAACAACAAGAACTCCAC...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGACAGGGTGGAGTTCTaGTTGTTGGCTTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVDRVEF*LLASRQ
Trigger: CTGCCTGGAAGCCAACAACAAGAACTCCACCCTGTC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCAAGTGGGTCAGTCCTaGGAGAGATTGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVQVGQS*ERLNHL
Trigger: GAGATGGTTCAATCTCTCCAAGGACTGACCCACTTG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAAGGGGGAGGTGGGCCTaGGGGTGGTTTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHERGRWA*GWFVVE
Trigger: TTCCACCACAAACCACCCCAAGGCCCACCTCCCCCT...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGACCCTATTGTTGACCTaGGTGACCTGGGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMTLLLT*VTWVEP
Trigger: AGGTTCCACCCAGGTCACCAAGGTCAACAATAGGGT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGATGGCATTGATGGCCTaGGGGACCCTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMMALMA*GTLLLT
Trigger: GGTCAACAATAGGGTCCCCAAGGCCATCAATGCCAT...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGAAAAGCTGCACTGCTaGGGGTATTTAGTACATTAC +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGEKLHC*GYLVHY
Trigger: GTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTGATGGCAGGGTGGTaGGTGCCCGCTATGGCTATG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVMAGW*VPAMAM
Trigger: CATAGCCATAGCGGGCACCAACCACCCTGCCATCAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTGATGGCAGGGTGGTaGGTGCCCGCTATGGCTATG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVMAGW*VPAMAM
Trigger: CATAGCCATAGCGGGCACCAACCACCCTGCCATCAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGTACCCCTGGAGAAGTaGCTGCTGTTGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMVPLEK*LLLLIW
Trigger: CCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTAC...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAAATTGTGGACTGTCCTaGGAACGCCTGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASNCGLS*ERLEIL
Trigger: CAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGGGTCAATCCTCGGTaGCAACTCACAAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVWVNPR*QLTRCI
Trigger: GATACACCTTGTGAGTTGCAACCGAGGATTGACCCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGACAACCTGCATTCCTTaGCTGGCTGCATCGACAACT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVTTCIP*LAASTT
Trigger: AGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCCCTGGACAGTTTCTaGGTGGTAACAGTATTGGGT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPLDSF*VVTVLG
Trigger: ACCCAATACTGTTACCACCAAGAAACTGTCCAGGGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGACACCCATTAACGCTTTaGGCATTAAAGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGHPLTL*ALKSPL
Trigger: CAATGGAGACTTTAATGCCAAAAGCGTTAATGGGTG...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GCTTTCCACTTTTTCTGTTCCTTTTCCGGACACGGCTGTAGGCTTCCAAACCTTCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAG +
Preference number: 5 (lower is better)
Translates to: AFHFFCSFSGHGCRLPNLQEVSP*IWPQTK
Trigger: CTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTG...AAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASTVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVTVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCCTAAAGGGTGGAGGTaGATCTCAGACTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVPKGWR*ISDLPS
Trigger: AGAAGGCAAGTCTGAGATCAACCTCCACCCTTTAGG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 90 bp ACTGTTGACTGCAGTGGTGATGACAACCTGCATTCCTTTGCTGGCTaGATCGACAACTGCTTTGTAAATGGCATCTACGGAAGCATCACC +
Preference number: 5 (lower is better)
Translates to: TVDCSGDDNLHSFAG*IDNCFVNGIYGSIT
Trigger: GGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCACTGCAGTCAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp GTGGGCCAGTGCAGCACAGTTTTTCCCAGACTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTTGGAACCAAGTCCTTGAAATATGCC +
Preference number: 5 (lower is better)
Translates to: VGQCSTVFPRLYKTH*EASAQFGTKSLKYA
Trigger: GGCATATTTCAAGGACTTGGTTCCAAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGTCTGGGAAAAACTGTGCTGCACTGGCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TGCATTTGTTCCTCCTCCGGGACTGGTGAGCACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATGAAGTGTGGCCACTGCAATAATTTT +
Preference number: 5 (lower is better)
Translates to: CICSSSGTGEHQRRM*GFHAFMKCGHCNNF
Trigger: AAAATTATTGCAGTGGCCACACTTCATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAGGAACAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TGGGTCAATCCTCGGTTGCAACTCACAAGGTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATTCTCAGGAAGTGCTGTGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WVNPRLQLTRCILKR*KCSVWILRKCCEPR
Trigger: CCTGGGCTCACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp CAAACCCATCTCCTTCGTTCACATTTTTCCCATGGTCTAGATTCTTaGGCAGCCGAGCCCCTCTTGAATTCCTCAGCCTACCATCATGAT +
Preference number: 5 (lower is better)
Translates to: QTHLLRSHFSHGLDS*AAEPLLNSSAYHHD
Trigger: ATCATGATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGGGAAAAATGTGAACGAAGGAGATGGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TCGGGCTCCACAAGGTGTATCTTGAAAAGGTGGAAGTGTAGTGTTTaGATTCTCAGGAAGTGCTGTGAGCCCAGGCTGAGTGCTTATTCT +
Preference number: 5 (lower is better)
Translates to: SGSTRCILKRWKCSV*ILRKCCEPRLSAYS
Trigger: AGAATAAGCACTCAGCCTGGGCTCACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGGAGCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS CCA 90 bp AATATGGTAACACTAGGCCAACATTCCTGCCTTGCAACAATTATCTaGAATGGAGCAGTGGCTGCTCCTCCAGAAAGGATTTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: NMVTLGQHSCLATII*NGAVAAPPERIWRS
Trigger: GGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAGGAATGTTGGCCTAGTGTTACCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAGTCATTCCTCTGTGTTaGATGGAACTAAAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGVIPLC*MELKKH
Trigger: ATGCTTCTTTAGTTCCATCAAACACAGAGGAATGAC...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCTCCGTCACACTCTTaGCCTCCATTCATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPPSHS*PPFIFC
Trigger: ACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTACTGATCTTGGAGTaGCTGCCCGAGAAGGTACTA +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLLILE*LPEKVL
Trigger: TAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGGTGGAGTTCTTGTTGTaGGCTTCCAGGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWVEFLL*ASRQFL
Trigger: CAAGAACTGCCTGGAAGCCAACAACAAGAACTCCAC...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAAGGGTGGAGTTCTTGTaGTTGGCTTCCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHERVEFL*LASRQF
Trigger: GAACTGCCTGGAAGCCAACAACAAGAACTCCACCCT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAGGGGGAGGTGGGCCTaGGGGTGGTTTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRGRWA*GWFVVE
Trigger: TTCCACCACAAACCACCCCAAGGCCCACCTCCCCCT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGGGGGAGGTGGGCCTaGGGGTGGTTTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRGRWA*GWFVVE
Trigger: TTCCACCACAAACCACCCCAAGGCCCACCTCCCCCT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCACCCTATTGTTGACCTaGGTGACCTGGGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVTLLLT*VTWVEP
Trigger: AGGTTCCACCCAGGTCACCAAGGTCAACAATAGGGT...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGCCTTGGGGACCCTATaGTTGACCTTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGALGTL*LTLVTW
Trigger: CCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAATGGCATTGATGGCCTaGGGGACCCTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGMALMA*GTLLLT
Trigger: GGTCAACAATAGGGTCCCCAAGGCCATCAATGCCAT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLRVNY*LERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTTTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGCTGCTCGACCACTTaGCCCTTCACCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVACCSTT*PFTCWE
Trigger: CTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTGCTGCTCGACCACTTaGCCCTTCACCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGCCSTT*PFTCWE
Trigger: CTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACCGCAATGCGTCTTTTaGCTGAGACATCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASPQCVF*LRHQLI
Trigger: GATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCCGCAATGCGTCTTTTaGCTGAGACATCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVPQCVF*LRHQLI
Trigger: GATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCGTGGAAGATGGTTGTTaGAAGTGCTGTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMAVEDGC*KCCWME
Trigger: TTCCATCCAACAGCACTTCAAACAACCATCTTCCAC...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGAATTGTGGACTGTCCTaGGAACGCCTGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMNCGLS*ERLEIL
Trigger: CAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATT...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCACAAGCCATGGGGTTATaGTTAGCTGGGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASQAMGL*LAGQGI
Trigger: AATTCCTTGCCCAGCTAACAATAACCCCATGGCTTG...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGCAGCCGAGCCCCTCTaGAATTCCTCAGCCTACCAT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGAAEPL*NSSAYH
Trigger: ATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCATGGTCTAGATTCTaGGGCAGCCGAGCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPWSRF*GSRAPL
Trigger: AAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCACCCCTGGACAGTTTCTaGGTGGTAACAGTATTGGGT +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASPLDSF*VVTVLG
Trigger: ACCCAATACTGTTACCACCAAGAAACTGTCCAGGGG...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCAACTATTTGAGGAACTaGGAGACTGCTCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMANYLRN*ETAPLG
Trigger: TCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTT...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAGTCACCCTGTGGGATTaGGTGTACAGTCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEVTLWD*VYSPRH
Trigger: ATGTCTGGGACTGTACACCAAATCCCACAGGGTGAC...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCACTGCCTGCAAAGCTaGGTAAAGGGTTCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGHCLQS*VKGSPG
Trigger: CCCTGGGGAACCCTTTACCAAGCTTTGCAGGCAGTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAATCCTGAGGCCCCATaGACAGCTGGGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLNPEAP*TAGRNR
Trigger: CCTGTTCCTCCCAGCTGTCAATGGGGCCTCAGGATT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACCACAGAGTTACTGTaGAGTTTAGCTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASTTELL*SLAGPG
Trigger: ACCTGGTCCAGCTAAACTCAACAGTAACTCTGTGGT...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 90 bp CTTCAGTGTTGCCACTGCCGGCAACAGCTCCAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAAGTTTGTTTTGATTTGCTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LQCCHCRQQLQNCYC*YCCYQQVCFDLLAV
Trigger: CACAGCTAGCAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTCTGAATCCAAGGTGTaGCAGGTTGGTTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVSESKV*QVGSSD
Trigger: ATCAGATGAACCAACCTGCAACACCTTGGATTCAGA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEGRPPS*SPPSHS
Trigger: AGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAATAAAGCACTCCATTTaGATCCACACGACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASIKHSI*IHTTLP
Trigger: TGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTAT...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTACTGGAGTTGCATTaGTTCCTCCTCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLLELH*FLLRDW
Trigger: CCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCAAGGTACTACTGGAGTaGCATTTGTTCCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVKVLLE*HLFLLR
Trigger: CCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTT...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAAGGTACTACTGGAGTaGCATTTGTTCCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVKVLLE*HLFLLR
Trigger: CCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATTACTGATCTTGGAGTaGCTGCCCGAGAAGGTACTA +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASLLILE*LPEKVL
Trigger: TAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAA...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATATTTCTTACTGATCTaGGAGTTGCTGCCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASYFLLI*ELLPEK
Trigger: CTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCAATGGGAGATTACTaGGCAAAGGAACAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMAMGDY*AKEQQQ
Trigger: CTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGC...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTGGGGACCCTATTGTaGACCTTGGTGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLGTLL*TLVTWV
Trigger: CACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTGGGGACCCTATTGTaGACCTTGGTGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVLGTLL*TLVTWV
Trigger: CACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTTGGGGACCCTATTGTaGACCTTGGTGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLGTLL*TLVTWV
Trigger: CACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGCCTTGGGGACCCTATaGTTGACCTTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEALGTL*LTLVTW
Trigger: CCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGCTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWLRVNY*LERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAG...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCCTACTGCTGCTACTGTaGTTACCAGCAAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: PCGIWCTVPDILSSSLMALLLLL*LPASLF
Trigger: AAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAG...GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTATGTCCTTCAGTGTaGCCACTGCCGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLCPSV*PLPATA
Trigger: AGCTGTTGCCGGCAGTGGCAACACTGAAGGACATAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTATGTCCTTCAGTGTaGCCACTGCCGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLCPSV*PLPATA
Trigger: AGCTGTTGCCGGCAGTGGCAACACTGAAGGACATAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCACTGTCGTAGGTGGTaGTTTTCTTTTCCGCAATGC +
Preference number: 5 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHHCRRW*FSFPQC
Trigger: GCATTGCGGAAAAGAAAACAACCACCTACGACAGTG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACTGGAGTGGAGGACGTaGAAATTCTTGACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLEWRT*KFLTEV
Trigger: CACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCTGGAGTGGAGGACGTaGAAATTCTTGACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVLEWRT*KFLTEV
Trigger: CACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTGATGGCAGGGTGGTaGGTGCCCGCTATGGCTATG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVMAGW*VPAMAM
Trigger: CATAGCCATAGCGGGCACCAACCACCCTGCCATCAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGTGGAAGATGGTTGTTaGAAGTGCTGTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASVEDGC*KCCWME
Trigger: TTCCATCCAACAGCACTTCAAACAACCATCTTCCAC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAGGGTGTGGAAGATGGTaGTTTGAAGTGCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASGCGRW*FEVLLD
Trigger: ATCCAACAGCACTTCAAACAACCATCTTCCACACCC...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASAAVAD*EETSDC
Trigger: ACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAATTGTGGACTGTCCTaGGAACGCCTGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVNCGLS*ERLEIL
Trigger: CAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCAATTGTGGACTGTCCTaGGAACGCCTGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSNCGLS*ERLEIL
Trigger: CAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATT...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAACAACCTGCATTCCTTaGCTGGCTGCATCGACAACT +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHETTCIP*LAASTT
Trigger: AGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGT...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGAAATTTTCCAAACTATTaGAGGAACTTGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGNFPNY*RNLETA
Trigger: AGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATT...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAGTCAGTCCTTTGATTaGGCCCCAGACCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSQSFD*APDQVA
Trigger: GGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAGTCAGTCCTTTGATTaGGCCCCAGACCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSQSFD*APDQVA
Trigger: GGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVTVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPRHPK*SPVLPG
Trigger: GCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPRHPK*SPVLPG
Trigger: GCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGTGCTGAGCCTGCTATaGGAGAATCTCCTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLVLSLL*ENLLAA
Trigger: GGCTGCTAGGAGATTCTCCAATAGCAGGCTCAGCAC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GCCCAGGGTAGCCAGTTGCATTCCATCAGGCTTGGGGGTAGGTTGAAAGTAGGATACAGTTCTGGCTGGTaGATAATTTTTGTTCATGTC +
Preference number: 5 (lower is better)
Translates to: AQGSQLHSIRLGGRLKVGYSSGW*IIFVHV
Trigger: GACATGAACAAAAATTATCAACCAGCCAGAACTGTA...TCCTACTTTCAACCTACCCCCAAGCCTGATGGAATGCAACTGGCTACCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCCTAAAGGGTGGAGGTaGATCTCAGACTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVPKGWR*ISDLPS
Trigger: AGAAGGCAAGTCTGAGATCAACCTCCACCCTTTAGG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTGTCCCACCAAGTGTaGAGACAGTCAGTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLSHQV*RQSVLP
Trigger: TGGCAGCACTGACTGTCTCAACACTTGGTGGGACAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 90 bp TTTATTAAACCTGCAAGATGGTGGTTGGGGACTGGACTGTTACTGTaGACAAAGTTAGTGTTTGCATTGTGGCAGTGCACGGCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: FIKPARWWLGTGLLL*TKLVFALWQCTASP
Trigger: AGGGGAAGCCGTGCACTGCCACAATGCAAACACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp ATGCTGTTTGGTATCACTGGAGTGGAGGACGTTGAAATTCTTGACTaGGGTGGATTGGGATGTAAGGAATTTCCTAAAGCCATGCCCGAC +
Preference number: 5 (lower is better)
Translates to: MLFGITGVEDVEILD*GGLGCKEFPKAMPD
Trigger: GTCGGGCATGGCTTTAGGAAATTCCTTACATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp GGAAGTGTAGTGTTTGGATTCTCAGGAAGTGCTGTGAGCCCAGGCTaGGTGCTTATTCTTTTGTTTAGGAGAGCTGCATCTTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: GSVVFGFSGSAVSPG*VLILLFRRAASSCI
Trigger: AATGCAGGAAGATGCAGCTCTCCTAAACAAAAGAATAAGCACTCAGCCTGGGCTCACAGCACTTCCTGAGAATCCAAACACTACACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp CCAAGAGATGGGTCAATCCTCGGTTGCAACTCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTGTTTGGATTCTCAGGAAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PRDGSILGCNSQGVS*KGGSVVFGFSGSAV
Trigger: CACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp TGCTATGTCCTTCAGTGTTGCCACTGCCGGCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGTTACCAGCAAGTTTGTTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: CYVLQCCHCRQQLQN*YCCYCCYQQVCFDL
Trigger: CAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAGGACATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TGTCCAAAGGCAGCAGAACCCAGTGGCATGTTAAAGGCTGTCCAGTaGAAACTGTATCAGCAGCAGACTTCAAAGCAGAATTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: CPKAAEPSGMLKAVQ*KLYQQQTSKQNFPM
Trigger: CATAGGAAAATTCTGCTTTGAAGTCTGCTGCTGATACAGTTTCCACTGGACAGCCTTTAACATGCCACTGGGTTCTGCTGCCTTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635796.1
CDS-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTCTGAATCCAAGGTGTaGCAGGTTGGTTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMSESKV*QVGSSD
Trigger: ATCAGATGAACCAACCTGCAACACCTTGGATTCAGA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHTVQNA*GSFSSV
Trigger: AACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGT...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACCTCCGTCACACTCTTaGCCTCCATTCATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGPPSHS*PPFIFC
Trigger: ACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCCTCCGTCACACTCTTaGCCTCCATTCATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVPPSHS*PPFIFC
Trigger: ACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGG...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCCTCCGTCACACTCTTaGCCTCCATTCATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVPPSHS*PPFIFC
Trigger: ACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACATTCCAAGCCACACTaGCATGTTCCATCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGHSKPH*HVPSVS
Trigger: GCTTACTGATGGAACATGCAAGTGTGGCTTGGAATG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTATTTCTTACTGATCTaGGAGTTGCTGCCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWYFLLI*ELLPEK
Trigger: CTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAAGGGTGGAGTTCTTGTaGTTGGCTTCCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVRVEFL*LASRQF
Trigger: GAACTGCCTGGAAGCCAACAACAAGAACTCCACCCT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAGGGTGGAGTTCTTGTaGTTGGCTTCCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGRVEFL*LASRQF
Trigger: GAACTGCCTGGAAGCCAACAACAAGAACTCCACCCT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGGGCCTTGGGGTGGTTaGTGGTGGAACATTGCTCGT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETGPWGG*WWNIAR
Trigger: ACGAGCAATGTTCCACCACAAACCACCCCAAGGCCC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAGGGGGAGGTGGGCCTaGGGGTGGTTTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTRGRWA*GWFVVE
Trigger: TTCCACCACAAACCACCCCAAGGCCCACCTCCCCCT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTG +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWDQVLQ*AMGDYL
Trigger: CAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTC...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTACCCTATTGTTGACCTaGGTGACCTGGGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVATLLLT*VTWVEP
Trigger: AGGTTCCACCCAGGTCACCAAGGTCAACAATAGGGT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAACCCTATTGTTGACCTaGGTGACCTGGGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVTLLLT*VTWVEP
Trigger: AGGTTCCACCCAGGTCACCAAGGTCAACAATAGGGT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCACCCTATTGTTGACCTaGGTGACCTGGGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGTLLLT*VTWVEP
Trigger: AGGTTCCACCCAGGTCACCAAGGTCAACAATAGGGT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGCCTTGGGGACCCTATaGTTGACCTTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIALGTL*LTLVTW
Trigger: CCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGCCTTGGGGACCCTATaGTTGACCTTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETALGTL*LTLVTW
Trigger: CCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCATGGCATTGATGGCCTaGGGGACCCTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGMALMA*GTLLLT
Trigger: GGTCAACAATAGGGTCCCCAAGGCCATCAATGCCAT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATGGCATTGATGGCCTaGGGGACCCTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLMALMA*GTLLLT
Trigger: GGTCAACAATAGGGTCCCCAAGGCCATCAATGCCAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAGAAAAGCTGCACTGCTaGGGGTATTTAGTACATTAC +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASEKLHC*GYLVHY
Trigger: GTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTC...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGCTACTGCTGCTACTGTaGTTACCAGCAAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVLLLLL*LPASLF
Trigger: AAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAG...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLVGRSM*AVGGNM
Trigger: CATGTTCCCTCCTACTGCCAACATGCTTCTCCCAAC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVGRSM*AVGGNM
Trigger: CATGTTCCCTCCTACTGCCAACATGCTTCTCCCAAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVGRSM*AVGGNM
Trigger: CATGTTCCCTCCTACTGCCAACATGCTTCTCCCAAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTCCGCAATGCGTCTTTTaGCTGAGACATCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVPQCVF*LRHQLI
Trigger: GATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGG...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCCGCAATGCGTCTTTTaGCTGAGACATCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVPQCVF*LRHQLI
Trigger: GATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGG...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAACCGCAATGCGTCTTTTaGCTGAGACATCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEPQCVF*LRHQLI
Trigger: GATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGG...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACACTGTCGTAGGTGGTaGTTTTCTTTTCCGCAATGC +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGHCRRW*FSFPQC
Trigger: GCATTGCGGAAAAGAAAACAACCACCTACGACAGTG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGGGTGTGGAAGATGGTaGTTTGAAGTGCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSGCGRW*FEVLLD
Trigger: ATCCAACAGCACTTCAAACAACCATCTTCCACACCC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGGGTGTGGAAGATGGTaGTTTGAAGTGCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVGCGRW*FEVLLD
Trigger: ATCCAACAGCACTTCAAACAACCATCTTCCACACCC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGT +
Preference number: 5 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHAAVAD*EETSDC
Trigger: ACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGC...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGT +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWAAVAD*EETSDC
Trigger: ACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGC...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAGAGAAGTTGCTGCTGTaGCTGATTTGGAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASEKLLL*LIWRKH
Trigger: ATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTC...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGTACCCCTGGAGAAGTaGCTGCTGTTGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLVPLEK*LLLLIW
Trigger: CCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTAC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTACCCCTGGAGAAGTaGCTGCTGTTGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVPLEK*LLLLIW
Trigger: CCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGCAGCCGAGCCCCTCTaGAATTCCTCAGCCTACCAT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETAAEPL*NSSAYH
Trigger: ATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTGGTGGTAACAGTATaGGGTGCTGTTCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLVVTV*GAVPQA
Trigger: TGCCTGGGGAACAGCACCCAATACTGTTACCACCAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGQEVSP*IWPQTK
Trigger: CTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAQEVSP*IWPQTK
Trigger: CTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGTCACCCTGTGGGATTaGGTGTACAGTCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGVTLWD*VYSPRH
Trigger: ATGTCTGGGACTGTACACCAAATCCCACAGGGTGAC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGATATATGCTTGTGACTaGCAAGGGAACACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVIYACD*QGNTAN
Trigger: GTTTGCAGTGTTCCCTTGCAAGTCACAAGCATATAT...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTTCCCATGCTCGAGTaGTTTATTGCTTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASFPMLE*FIAFWL
Trigger: GAGCCAAAAAGCAATAAACAACTCGAGCATGGGAAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGCGTTTACATTCGGGTaGAGAAAACCTAAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVAFTFG*RKPKGW
Trigger: CCACCCTTTAGGTTTTCTCAACCCGAATGTAAACGC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAATCCTGAGGCCCCATaGACAGCTGGGAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAINPEAP*TAGRNR
Trigger: CCTGTTCCTCCCAGCTGTCAATGGGGCCTCAGGATT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCAATGTTTCTGCCATaGACACCACTGCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLAMFLP*TPLLSH
Trigger: GTGGGACAGCAGTGGTGTCAATGGCAGAAACATTGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTACCACAGAGTTACTGTaGAGTTTAGCTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVTTELL*SLAGPG
Trigger: ACCTGGTCCAGCTAAACTCAACAGTAACTCTGTGGT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 90 bp TTTGCATTGTGGCAGTGCACGGCTTCCCCTCTTAAAGGTATGTTCTaGAGAACACTAGAGTTCATACTGGGATCTGTAAAATGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FALWQCTASPLKGMF*RTLEFILGSVKCSW
Trigger: CCAGCTGCATTTTACAGATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 90 bp TCTTTGACCAGAGAATTTTCCAAACTATTTGAGGAACTTGGAGACTaGTCCTCTAGGACCAGGTCTTGCTTTGCAGTGCTTAGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SLTREFSKLFEELGD*SSRTRSCFAVLSSS
Trigger: AGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATTCTCTGGTCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TACATGACTCCCATGATTCATGTGACCAGGTTTTACAGTTGGCAATaGGAGATTACTTGGCAAAGGAACAACAGCAGGAGGCATGCTTAC +
Preference number: 5 (lower is better)
Translates to: YMTPMIHVTRFYSWQ*EITWQRNNSRRHAY
Trigger: GTAAGCATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATGGGAGTCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGTVQNA*GSFSSV
Trigger: AACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGT...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQGRPPS*SPPSHS
Trigger: AGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAAGGTACTACTGGAGTaGCATTTGTTCCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAKVLLE*HLFLLR
Trigger: CCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGGCCTTCCCATGGCATTaGATGATCCAATCATTAACT +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWAFPWH*MIQSLT
Trigger: AGTTAATGATTGGATCATCAAATGCCATGGGAAGGC...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGTGGAGTTCTTGTTGTaGGCTTCCAGGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVVEFLL*ASRQFL
Trigger: CAAGAACTGCCTGGAAGCCAACAACAAGAACTCCAC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCAGTCCTTGGAGAGATaGAACCATCTCCATATATCT +
Preference number: 5 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHQSLER*NHLHIS
Trigger: AGATATATGGAGATGGTTCAATCTCTCCAAGGACTG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACAAGTGGGTCAGTCCTaGGAGAGATTGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVQVGQS*ERLNHL
Trigger: GAGATGGTTCAATCTCTCCAAGGACTGACCCACTTG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGTTTGTGGTGGAACATaGCTCGTGGTATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMVCGGT*LVVFPY
Trigger: ATATGGAAATACCACGAGCAATGTTCCACCACAAAC...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGAGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTG +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGDQVLQ*AMGDYL
Trigger: CAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTC...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGCCTTGGGGACCCTATaGTTGACCTTGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPALGTL*LTLVTW
Trigger: CCAGGTCACCAAGGTCAACAATAGGGTCCCCAAGGC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATCAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: VGFGVQSQTFCPVHSWPHQVCFD*LAVLWL
Trigger: CAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTG...ATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGCTACTGCTGCTACTGTaGTTACCAGCAAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMLLLLL*LPASLF
Trigger: AAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAG...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTATGTCCTTCAGTGTaGCCACTGCCGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAILCPSV*PLPATA
Trigger: AGCTGTTGCCGGCAGTGGCAACACTGAAGGACATAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATG +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEVGRSM*AVGGNM
Trigger: CATGTTCCCTCCTACTGCCAACATGCTTCTCCCAAC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATGCTGCTCGACCACTTaGCCCTTCACCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPCCSTT*PFTCWE
Trigger: CTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCTCATTTGTCTGTCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: SHLSVTLWDLVYSPRHFVRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...GACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGACAGACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTGGAGTGGAGGACGTaGAAATTCTTGACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVALEWRT*KFLTEV
Trigger: CACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGTGATGGCAGGGTGGTaGGTGCCCGCTATGGCTATG +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTVMAGW*VPAMAM
Trigger: CATAGCCATAGCGGGCACCAACCACCCTGCCATCAC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCAGACTATGACGCCATCTaGAAGAACAGATGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: CGIWCTVPDILSSSLMASDYDAI*KNRCCL
Trigger: AAGACAACATCTGTTCTTCAAGATGGCGTCATAGTC...TGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp TTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATAGCGTGGAAGATGGTTGTTaGAAGTGCTGTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: LVYSPRHFVQFTHGLMNSVEDGC*KCCWME
Trigger: TTCCATCCAACAGCACTTCAAACAACCATCTTCCAC...GCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAAGAGAAGTTGCTGCTGTaGCTGATTTGGAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHEEKLLL*LIWRKH
Trigger: ATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTC...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGAGAAGTTGCTGCTGTaGCTGATTTGGAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVEKLLL*LIWRKH
Trigger: ATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAATTGTGGACTGTCCTaGGAACGCCTGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLNCGLS*ERLEIL
Trigger: CAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTGGGTCAATCCTCGGTaGCAACTCACAAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAWVNPR*QLTRCI
Trigger: GATACACCTTGTGAGTTGCAACCGAGGATTGACCCA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCCATCCTTCACCTGTaGACCAAGAGATGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLAILHL*TKRWVN
Trigger: ATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGGCAACTTGCTGACTaGAAATATTCAAACCCATCT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASWQLAD*KYSNPS
Trigger: AGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCCA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTGGCAACTTGCTGACTaGAAATATTCAAACCCATCT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVWQLAD*KYSNPS
Trigger: AGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCCA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCCGTCCCACTGTTTTTaGGATGTGTGGCAACTTGCT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGPSHCF*DVWQLA
Trigger: AGCAAGTTGCCACACATCCAAAAAACAGTGGGACGG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGTVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTACAGTCCCAGACATTTaGTCCAGTTCACTCATGGCC +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVATVPDI*SSSLMA
Trigger: GGCCATGAGTGAACTGGACAAAATGTCTGGGACTGT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACTGAGTGGCAGACTGTaGTGTGAGCCCCAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQLSGRL*CEPQAR
Trigger: TCTAGCCTGGGGCTCACACAACAGTCTGCCACTCAG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATGCTCGAGTTGTTTATaGCTTTTTGGCTCACTGATT +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASCSSCL*LFGSLI
Trigger: AATCAGTGAGCCAAAAAGCAATAAACAACTCGAGCA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTCTGAGATGGTCAGATaGAAAGATGGCAGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLSEMVR*KDGRGS
Trigger: GCTTCCCCTGCCATCTTTCAATCTGACCATCTCAGA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 90 bp CAGCCTCCGAGTAGCTGGGATTACATTACAAGCGTTGAGTCACCATaGGCAGTTCCCAAATGTCATTTTTGCCATACAAAGAAAAGACTG +
Preference number: 5 (lower is better)
Translates to: QPPSSWDYITSVESP*AVPKCHFCHTKKRL
Trigger: CAGTCTTTTCTTTGTATGGCAAAAATGACATTTGGGAACTGCTCATGGTGACTCAACGCTTGTAATGTAATCCCAGCTACTCGGAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS GCA 90 bp CTGGAAGACAGAGCAAGACTTGTGATAAAAGAAATGTTCTATATCTaGGTTGTCCTCTATGTCCACTGTCATATGTGGGCTTTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LEDRARLVIKEMFYI*VVLYVHCHMWAFLP
Trigger: GGGCAGGAAAGCCCACATATGACAGTGGACATAGAGGACAACGCAGATATAGAACATTTCTTTTATCACAAGTCTTGCTCTGTCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638130.1
CDS CCA 90 bp TCTTTGTACATGACTCCCATGATTCATGTGACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGGCAAAGGAACAACAGCAGGAGGCAT +
Preference number: 5 (lower is better)
Translates to: SLYMTPMIHVTRFYS*QWEITWQRNNSRRH
Trigger: ATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATGGGAGTCATGTACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 90 bp TACTGTTGTTACCAGCAAGTTTGTTTTGATTTGCTAGCTGTGCTTTaGCTGCTGCTGAGAGTAAACTACTTGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: YCCYQQVCFDLLAVL*LLLRVNYLLERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGGTAACAACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATTAGGGTTCTATGGATaGATGAAGGAAAATAGTGTG +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASLGFYG*MKENSV
Trigger: CACACTATTTTCCTTCATCAATCCATAGAACCCTAA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCATAAAGCACTCCATTTaGATCCACACGACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGIKHSI*IHTTLP
Trigger: TGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTAT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCATTCCAAGCCACACTaGCATGTTCCATCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAHSKPH*HVPSVS
Trigger: GCTTACTGATGGAACATGCAAGTGTGGCTTGGAATG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCATTCCAAGCCACACTaGCATGTTCCATCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLHSKPH*HVPSVS
Trigger: GCTTACTGATGGAACATGCAAGTGTGGCTTGGAATG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAAGGTACTACTGGAGTaGCATTTGTTCCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAKVLLE*HLFLLR
Trigger: CCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAGGGTGGAGTTCTTGTaGTTGGCTTCCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIRVEFL*LASRQF
Trigger: GAACTGCCTGGAAGCCAACAACAAGAACTCCACCCT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACAAGTGGGTCAGTCCTaGGAGAGATTGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAQVGQS*ERLNHL
Trigger: GAGATGGTTCAATCTCTCCAAGGACTGACCCACTTG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGTTTGTGGTGGAACATaGCTCGTGGTATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVVCGGT*LVVFPY
Trigger: ATATGGAAATACCACGAGCAATGTTCCACCACAAAC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGGGCCTTGGGGTGGTTaGTGGTGGAACATTGCTCGT +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFGPWGG*WWNIAR
Trigger: ACGAGCAATGTTCCACCACAAACCACCCCAAGGCCC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGCAATGGGAGATTACTaGGCAAAGGAACAACAGCAG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAAMGDY*AKEQQQ
Trigger: CTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGCAATGGGAGATTACTaGGCAAAGGAACAACAGCAG +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVAMGDY*AKEQQQ
Trigger: CTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGCAATGGGAGATTACTaGGCAAAGGAACAACAGCAG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLAMGDY*AKEQQQ
Trigger: CTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATTGGGGACCCTATTGTaGACCTTGGTGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQLGTLL*TLVTWV
Trigger: CACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AAGTTGCAATTTCCTAGACACCCGAAATTGAGTCCAGTGCTTCCAGGCAAGGTTGAAAAGCTGCACTGCTaGGGGTATTTAGTACATTAC +
Preference number: 5 (lower is better)
Translates to: KLQFPRHPKLSPVLPGKVEKLHC*GYLVHY
Trigger: GTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTC...AACCTTGCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGGAAATTGCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVLRVNY*LERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLLRVNY*LERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLRVNY*LERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CATGTCTCACAAACCAGGAAACCCTGCCTCGTATGGCTTATTTTGCAGTTTGGACTACTGCTGCTACTGTaGTTACCAGCAAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: HVSQTRKPCLVWLILQFGLLLLL*LPASLF
Trigger: AAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAG...TCCAAACTGCAAAATAAGCCATACGAGGCAGGGTTTCCTGGTTTGTGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTATGTCCTTCAGTGTaGCCACTGCCGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLCPSV*PLPATA
Trigger: AGCTGTTGCCGGCAGTGGCAACACTGAAGGACATAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCACTGTCGTAGGTGGTaGTTTTCTTTTCCGCAATGC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLHCRRW*FSFPQC
Trigger: GCATTGCGGAAAAGAAAACAACCACCTACGACAGTG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACTGGAGTGGAGGACGTaGAAATTCTTGACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWALEWRT*KFLTEV
Trigger: CACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGGGTGTGGAAGATGGTaGTTTGAAGTGCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLGCGRW*FEVLLD
Trigger: ATCCAACAGCACTTCAAACAACCATCTTCCACACCC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGTACCCCTGGAGAAGTaGCTGCTGTTGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETVPLEK*LLLLIW
Trigger: CCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTAC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCAAGCCATGGGGTTATaGTTAGCTGGGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAQAMGL*LAGQGI
Trigger: AATTCCTTGCCCAGCTAACAATAACCCCATGGCTTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGCCATCCTTCACCTGTaGACCAAGAGATGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAAILHL*TKRWVN
Trigger: ATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAACAACCTGCATTCCTTaGCTGGCTGCATCGACAACT +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWATTCIP*LAASTT
Trigger: AGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGT...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGCAGCCGAGCCCCTCTaGAATTCCTCAGCCTACCAT +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTAAEPL*NSSAYH
Trigger: ATGGTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CGCATTAGTGGAGTAGTCTCTGTTATCTGGAGATCTTCCTCCTCTTGGGTTTGGTGGCAACTTGCTGACTaGAAATATTCAAACCCATCT +
Preference number: 5 (lower is better)
Translates to: RISGVVSVIWRSSSSWVWWQLAD*KYSNPS
Trigger: AGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCCA...CCAAACCCAAGAGGAGGAAGATCTCCAGATAACAGAGACTACTCCACTAATGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTGGTGGTAACAGTATaGGGTGCTGTTCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAILVVTV*GAVPQA
Trigger: TGCCTGGGGAACAGCACCCAATACTGTTACCACCAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETQEVSP*IWPQTK
Trigger: CTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCAACAGGTGTTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 5 (lower is better)
Translates to: ILSTSGGAVSISYLLQQVFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...CACCTGTTGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACCCTCAATTCTGAGCACCAGCGGTGGTGCAGTCAGTATAAGCTATCTGCTTCATACAGTTCTGGCTGGTaGATAATTTTTGTTCATGTC +
Preference number: 5 (lower is better)
Translates to: TLNSEHQRWCSQYKLSASYSSGW*IIFVHV
Trigger: GACATGAACAAAAATTATCAACCAGCCAGAACTGTA...TGAAGCAGATAGCTTATACTGACTGCACCACCGCTGGTGCTCAGAATTGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GAGAGACAAAATGAACCTACCCCCAGAACGAAGGGTTCCTACTTTGAGGTCATGTGCTCGAGTTGTTTATaGCTTTTTGGCTCACTGATT +
Preference number: 5 (lower is better)
Translates to: ERQNEPTPRTKGSYFEVMCSSCL*LFGSLI
Trigger: AATCAGTGAGCCAAAAAGCAATAAACAACTCGAGCA...CATGACCTCAAAGTAGGAACCCTTCGTTCTGGGGGTAGGTTCATTTTGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGCGTTTACATTCGGGTaGAGAAAACCTAAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAAFTFG*RKPKGW
Trigger: CCACCCTTTAGGTTTTCTCAACCCGAATGTAAACGC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCACTGCCTGCAAAGCTaGGTAAAGGGTTCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTHCLQS*VKGSPG
Trigger: CCCTGGGGAACCCTTTACCAAGCTTTGCAGGCAGTG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGCAATGTTTCTGCCATaGACACCACTGCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETAMFLP*TPLLSH
Trigger: GTGGGACAGCAGTGGTGTCAATGGCAGAAACATTGC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGGCCTCATGAATCCACAAGGTGTATCTaGAAAAGGTGGAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: GFGVQSQTFCPVHSWPHESTRCI*KRWKCS
Trigger: ACTACACTTCCACCTTTTCAAGATACACCTTGTGGA...TTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS CCA 90 bp ATGATTCATGTGACCAGGTTTTACAGTTGGCAATGGGAGATTACTTaGCAAAGGAACAACAGCAGGAGGCATGCTTACATTCATCATAGG +
Preference number: 5 (lower is better)
Translates to: MIHVTRFYSWQWEIT*QRNNSRRHAYIHHR
Trigger: CCTATGATGAATGTAAGCATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTACCAAGGTGTTGCAGGTaGGTTCATCTGATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVPRCCR*VHLMFS
Trigger: TGAAAACATCAGATGAACCAACCTGCAACACCTTGG...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVATVQNA*GSFSSV
Trigger: AACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGT...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLTVQNA*GSFSSV
Trigger: AACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACCTCCGTCACACTCTTaGCCTCCATTCATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAPPSHS*PPFIFC
Trigger: ACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACATTCCAAGCCACACTaGCATGTTCCATCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAHSKPH*HVPSVS
Trigger: GCTTACTGATGGAACATGCAAGTGTGGCTTGGAATG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTACTGATCTTGGAGTaGCTGCCCGAGAAGGTACTA +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHELLILE*LPEKVL
Trigger: TAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGTGGAGTTCTTGTTGTaGGCTTCCAGGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIVEFLL*ASRQFL
Trigger: CAAGAACTGCCTGGAAGCCAACAACAAGAACTCCAC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGACAGGGTGGAGTTCTaGTTGTTGGCTTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTDRVEF*LLASRQ
Trigger: CTGCCTGGAAGCCAACAACAAGAACTCCACCCTGTC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGACAGGGTGGAGTTCTaGTTGTTGGCTTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFDRVEF*LLASRQ
Trigger: CTGCCTGGAAGCCAACAACAAGAACTCCACCCTGTC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTG +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGDQVLQ*AMGDYL
Trigger: CAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAACCCTATTGTTGACCTaGGTGACCTGGGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPTLLLT*VTWVEP
Trigger: AGGTTCCACCCAGGTCACCAAGGTCAACAATAGGGT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTGGGGACCCTATTGTaGACCTTGGTGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLGTLL*TLVTWV
Trigger: CACCCAGGTCACCAAGGTCAACAATAGGGTCCCCAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETATAPE*LLLLLL
Trigger: CAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTATGTCCTTCAGTGTaGCCACTGCCGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLCPSV*PLPATA
Trigger: AGCTGTTGCCGGCAGTGGCAACACTGAAGGACATAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATG +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQVGRSM*AVGGNM
Trigger: CATGTTCCCTCCTACTGCCAACATGCTTCTCCCAAC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTTGCCCTTCACCTGTaGGGAGAAGCATGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPFALHL*GEACWQ
Trigger: CTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACCGCAATGCGTCTTTTaGCTGAGACATCAGCTTATC +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEPQCVF*LRHQLI
Trigger: GATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTGGAGTGGAGGACGTaGAAATTCTTGACTGAGGTG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAILEWRT*KFLTEV
Trigger: CACCTCAGTCAAGAATTTCAACGTCCTCCACTCCAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGTGGAAGATGGTTGTTaGAAGTGCTGTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAVEDGC*KCCWME
Trigger: TTCCATCCAACAGCACTTCAAACAACCATCTTCCAC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGAAVAD*EETSDC
Trigger: ACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGAGAAGTTGCTGCTGTaGCTGATTTGGAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLEKLLL*LIWRKH
Trigger: ATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGAGAAGTTGCTGCTGTaGCTGATTTGGAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGEKLLL*LIWRKH
Trigger: ATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAATTGTGGACTGTCCTaGGAACGCCTGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAINCGLS*ERLEIL
Trigger: CAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTGGGTCAATCCTCGGTaGCAACTCACAAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETWVNPR*QLTRCI
Trigger: GATACACCTTGTGAGTTGCAACCGAGGATTGACCCA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGCCATCCTTCACCTGTaGACCAAGAGATGGGTCAAT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIAILHL*TKRWVN
Trigger: ATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAACAACCTGCATTCCTTaGCTGGCTGCATCGACAACT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAITTCIP*LAASTT
Trigger: AGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCGTCCCACTGTTTTTaGGATGTGTGGCAACTTGCT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPSHCF*DVWQLA
Trigger: AGCAAGTTGCCACACATCCAAAAAACAGTGGGACGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATTGGTGGTAACAGTATaGGGTGCTGTTCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQLVVTV*GAVPQA
Trigger: TGCCTGGGGAACAGCACCCAATACTGTTACCACCAA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTGGTGGTAACAGTATaGGGTGCTGTTCCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLVVTV*GAVPQA
Trigger: TGCCTGGGGAACAGCACCCAATACTGTTACCACCAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACCCCTGGACAGTTTCTaGGTGGTAACAGTATTGGGT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIPLDSF*VVTVLG
Trigger: ACCCAATACTGTTACCACCAAGAAACTGTCCAGGGG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAACTATTTGAGGAACTaGGAGACTGCTCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGNYLRN*ETAPLG
Trigger: TCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAGTCAGTCCTTTGATTaGGCCCCAGACCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTSQSFD*APDQVA
Trigger: GGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGTCACCCTGTGGGATTaGGTGTACAGTCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPVTLWD*VYSPRH
Trigger: ATGTCTGGGACTGTACACCAAATCCCACAGGGTGAC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TCACCCTGTGGGATTTGGTGTACAGTCCCAGACATTTTGTCCAGTTCACTCATGTTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 5 (lower is better)
Translates to: SPCGIWCTVPDILSSSLMFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...CATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCACAGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628572.2
ENST00000629878.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCCCTAGACACCCGAAATaGAGTCCAGTGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTPRHPK*SPVLPG
Trigger: GCCTGGAAGCACTGGACTCAATTTCGGGTGTCTAGG...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAGCAAAGGGTCTGTGTaGCTAAGAGGCTTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGSKGSV*LRGFWF
Trigger: AAACCAAAAGCCTCTTAGCAACACAGACCCTTTGCT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACTCGGGCTCCACCCCTaGTTGATACGACATTTTGTT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAILGLHP*LIRHFV
Trigger: AACAAAATGTCGTATCAACAAGGGGTGGAGCCCGAG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628572.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGCCAACATTCCTGCCTaGCAACAATTATCTGGAATG +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVANIPA*QQLSGM
Trigger: CATTCCAGATAATTGTTGCAAGGCAGGAATGTTGGC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCCCCTGAATTCAAGGTaGAAGTGGGGTAGAATTAGT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAPLNSR*KWGRIS
Trigger: ACTAATTCTACCCCACTTCAACCTTGAATTCAGGGG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS GCA 90 bp GATCAGAATTCACCACTCAGGAGTCTATTTATCTTCACAAGATACTaGACCAGCAGAGGCATCCCCACCTTCTTTTTAACTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: DQNSPLRSLFIFTRY*TSRGIPTFFLTANQ
Trigger: TTGATTTGCAGTTAAAAAGAAGGTGGGGATGCCTCTGCTGGTGCAGTATCTTGTGAAGATAAATAGACTCCTGAGTGGTGAATTCTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAATATTTCTTACTGATCTaGGAGTTGCTGCCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEYFLLI*ELLPEK
Trigger: CTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATA...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTGCCTTCCCATGGCATTaGATGATCCAATCATTAACT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAAFPWH*MIQSLT
Trigger: AGTTAATGATTGGATCATCAAATGCCATGGGAAGGC...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTAGCCTTCCCATGGCATTaGATGATCCAATCATTAACT +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVAFPWH*MIQSLT
Trigger: AGTTAATGATTGGATCATCAAATGCCATGGGAAGGC...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGTGGAGTTCTTGTTGTaGGCTTCCAGGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQVEFLL*ASRQFL
Trigger: CAAGAACTGCCTGGAAGCCAACAACAAGAACTCCAC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAAGTGGGTCAGTCCTaGGAGAGATTGAACCATCTC +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQVGQS*ERLNHL
Trigger: GAGATGGTTCAATCTCTCCAAGGACTGACCCACTTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGTTTGTGGTGGAACATaGCTCGTGGTATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLVCGGT*LVVFPY
Trigger: ATATGGAAATACCACGAGCAATGTTCCACCACAAAC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCGAAAAGCTGCACTGCTaGGGGTATTTAGTACATTAC +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGEKLHC*GYLVHY
Trigger: GTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTC...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGAAAAGCTGCACTGCTaGGGGTATTTAGTACATTAC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLEKLHC*GYLVHY
Trigger: GTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAQVCFD*LAVLWL
Trigger: CAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGCAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLQVCFD*LAVLWL
Trigger: CAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTG...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTACTGCTGCTACTGTaGTTACCAGCAAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLLLLL*LPASLF
Trigger: AAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTACTGCTGCTACTGTaGTTACCAGCAAGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVALLLLL*LPASLF
Trigger: AAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACACTGTCGTAGGTGGTaGTTTTCTTTTCCGCAATGC +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIHCRRW*FSFPQC
Trigger: GCATTGCGGAAAAGAAAACAACCACCTACGACAGTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGGACTATGACGCCATCTaGAAGAACAGATGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLDYDAI*KNRCCL
Trigger: AAGACAACATCTGTTCTTCAAGATGGCGTCATAGTC...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGTACCCCTGGAGAAGTaGCTGCTGTTGCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTVPLEK*LLLLIW
Trigger: CCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTAC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACAAGCCATGGGGTTATaGTTAGCTGGGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIQAMGL*LAGQGI
Trigger: AATTCCTTGCCCAGCTAACAATAACCCCATGGCTTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCTCACAAGGTGTATCTaGAAAAGGTGGAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVALTRCI*KRWKCS
Trigger: ACTACACTTCCACCTTTTCAAGATACACCTTGTGAG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCCTCACAAGGTGTATCTaGAAAAGGTGGAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGLTRCI*KRWKCS
Trigger: ACTACACTTCCACCTTTTCAAGATACACCTTGTGAG...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCGTCCCACTGTTTTTaGGATGTGTGGCAACTTGCT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPSHCF*DVWQLA
Trigger: AGCAAGTTGCCACACATCCAAAAAACAGTGGGACGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCCCTGGACAGTTTCTaGGTGGTAACAGTATTGGGT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPLDSF*VVTVLG
Trigger: ACCCAATACTGTTACCACCAAGAAACTGTCCAGGGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTCACCCATTAACGCTTTaGGCATTAAAGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAHPLTL*ALKSPL
Trigger: CAATGGAGACTTTAATGCCAAAAGCGTTAATGGGTG...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATGCAAAGTGGGGTTTTaGCCTCCATGTACGGAAATA +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWACKVGF*PPCTEI
Trigger: TATTTCCGTACATGGAGGCAAAAACCCCACTTTGCA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATACCAAAAAGAAGGCTaGGTCAACACAAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAYQKEG*VNTNSA
Trigger: GGCTGAGTTTGTGTTGACCAAGCCTTCTTTTTGGTA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGATATATGCTTGTGACTaGCAAGGGAACACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLIYACD*QGNTAN
Trigger: GTTTGCAGTGTTCCCTTGCAAGTCACAAGCATATAT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAGGTTGATCTCAGACTaGCCTTCTCCTGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTRLISD*PSPAEG
Trigger: GCCTTCAGCAGGAGAAGGCAAGTCTGAGATCAACCT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATCTGAGATGGTCAGATaGAAAGATGGCAGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPSEMVR*KDGRGS
Trigger: GCTTCCCCTGCCATCTTTCAATCTGACCATCTCAGA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTCCTCCAGAAAGGATTaGGCGCTCCAGTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFSSRKD*ALQFTA
Trigger: TGCAGTGAACTGGAGCGCCAAATCCTTTCTGGAGGA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTACTATCAGCAACAAAGACATGTGGGTTAGAATGCTTCTCCAGCATGACGGTATTTAACCTATATGCTTaGACACCCCCAGCAGTAACA +
Preference number: 5 (lower is better)
Translates to: LLSATKTCGLECFSSMTVFNLYA*TPPAVT
Trigger: TGTTACTGCTGGGGGTGTCAAAGCATATAGGTTAAA...TACCGTCATGCTGGAGAAGCATTCTAACCCACATGTCTTTGTTGCTGATAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS TCA 90 bp TTTTCTGTGTCTGCTAGGGACTCTCCAAAGATATCAGCAATAAGATaGTATCCTTATATTACAGAGCATGATGGCCTTCAAAAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FSVSARDSPKISAIR*YPYITEHDGLQKWA
Trigger: GGCCCACTTTTGAAGGCCATCATGCTCTGTAATATAAGGATATCATCTTATTGCTGATATCTTTGGAGAGTCCCTAGCAGACACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp AGGAGGCATGCTTACATTCATCATAGGTACCTGAGAGTGGACATTTaGATGGAAACTGGTTGGATTAATGATAACAGGGTTCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: RRHAYIHHRYLRVDI*METGWINDNRVLIH
Trigger: GTGAATCAGAACCCTGTTATCATTAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTACCTATGATGAATGTAAGCATGCCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp GTGATATGTGTGCTTTTGTTTGTCCTACTAAACTATATGCTTCTTTaGGGCCGGGTGATAACAGATTCATCTTCTTGGGTCCCCGAAAAA +
Preference number: 5 (lower is better)
Translates to: VICVLLFVLLNYMLL*GRVITDSSSWVPEK
Trigger: TTTTTCGGGGACCCAAGAAGATGAATCTGTTATCACCCGGCCTCAAAGAAGCATATAGTTTAGTAGGACAAACAAAAGCACACATATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637445.1
CDS GCA 90 bp CTGACATCTTCAATGTACATTGTGATAAAAGAAATGTTCTATATCTaGGTTGTCCTCTATGTCCACTGTCATATGTGGGCTTTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LTSSMYIVIKEMFYI*VVLYVHCHMWAFLP
Trigger: GGGCAGGAAAGCCCACATATGACAGTGGACATAGAGGACAACGCAGATATAGAACATTTCTTTTATCACAATGTACATTGAAGATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473478.5
CDS GCA 90 bp CAGAGACAGTTAACATACATACATAGGCTCACATTACATCTAGCATaGTGTCTTATCCCAGGCACTAGAGAATATTCGCCCATTCTTTCA +
Preference number: 5 (lower is better)
Translates to: QRQLTYIHRLTLHLA*CLIPGTREYSPILS
Trigger: TGAAAGAATGGGCGAATATTCTCTAGTGCCTGGGATAAGACAGCATGCTAGATGTAATGTGAGCCTATGTATGTATGTTAACTGTCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637445.1
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCCAAGGTGTTGCAGGTaGGTTCATCTGATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETPRCCR*VHLMFS
Trigger: TGAAAACATCAGATGAACCAACCTGCAACACCTTGG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAITVQNA*GSFSSV
Trigger: AACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAATAAAGCACTCCATTTaGATCCACACGACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPIKHSI*IHTTLP
Trigger: TGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTAT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACATTCCAAGCCACACTaGCATGTTCCATCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPHSKPH*HVPSVS
Trigger: GCTTACTGATGGAACATGCAAGTGTGGCTTGGAATG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTAAGGTACTACTGGAGTaGCATTTGTTCCTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFKVLLE*HLFLLR
Trigger: CCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTACTGATCTTGGAGTaGCTGCCCGAGAAGGTACTA +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLLILE*LPEKVL
Trigger: TAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGCCTTCCCATGGCATTaGATGATCCAATCATTAACT +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAAFPWH*MIQSLT
Trigger: AGTTAATGATTGGATCATCAAATGCCATGGGAAGGC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACAGTCCTTGGAGAGATaGAACCATCTCCATATATCT +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEQSLER*NHLHIS
Trigger: AGATATATGGAGATGGTTCAATCTCTCCAAGGACTG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCAGTTTGTGGTGGAACATaGCTCGTGGTATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAVCGGT*LVVFPY
Trigger: ATATGGAAATACCACGAGCAATGTTCCACCACAAAC...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGCAATGGGAGATTACTaGGCAAAGGAACAACAGCAG +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPAMGDY*AKEQQQ
Trigger: CTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETDQVLQ*AMGDYL
Trigger: CAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIDQVLQ*AMGDYL
Trigger: CAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAAGAAAAGCTGCACTGCTaGGGGTATTTAGTACATTAC +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEEKLHC*GYLVHY
Trigger: GTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTC...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLRVNY*LERRQH
Trigger: ATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTGACACCCCCAGCAGTAACAGTACAGGTCAGATGTATTACAAAGATACATGAACAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LTPPAVTVQVRCITKIHEQVCFD*LAVLWL
Trigger: CAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTG...TTCATGTATCTTTGTAATACATCTGACCTGTACTGTTACTGCTGGGGGTGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACACTGTCGTAGGTGGTaGTTTTCTTTTCCGCAATGC +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQHCRRW*FSFPQC
Trigger: GCATTGCGGAAAAGAAAACAACCACCTACGACAGTG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTAAGTTAGTGTTTGCATaGTGGCAGTGCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFKLVFA*WQCTAS
Trigger: GGAAGCCGTGCACTGCCACAATGCAAACACTAACTT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGTGGAAGATGGTTGTTaGAAGTGCTGTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETVEDGC*KCCWME
Trigger: TTCCATCCAACAGCACTTCAAACAACCATCTTCCAC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGGGTGTGGAAGATGGTaGTTTGAAGTGCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPGCGRW*FEVLLD
Trigger: ATCCAACAGCACTTCAAACAACCATCTTCCACACCC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETAAVAD*EETSDC
Trigger: ACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAGAGAAGTTGCTGCTGTaGCTGATTTGGAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIEKLLL*LIWRKH
Trigger: ATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTC...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACAAGCCATGGGGTTATaGTTAGCTGGGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQQAMGL*LAGQGI
Trigger: AATTCCTTGCCCAGCTAACAATAACCCCATGGCTTG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAAGCCATGGGGTTATaGTTAGCTGGGCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQAMGL*LAGQGI
Trigger: AATTCCTTGCCCAGCTAACAATAACCCCATGGCTTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTGGCAACTTGCTGACTaGAAATATTCAAACCCATCT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLWQLAD*KYSNPS
Trigger: AGATGGGTTTGAATATTTCAAGTCAGCAAGTTGCCA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAACTATTTGAGGAACTaGGAGACTGCTCCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNYLRN*ETAPLG
Trigger: TCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCACACCCATTAACGCTTTaGGCATTAAAGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAHPLTL*ALKSPL
Trigger: CAATGGAGACTTTAATGCCAAAAGCGTTAATGGGTG...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATATGCAAAGTGGGGTTTTaGCCTCCATGTACGGAAATA +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAICKVGF*PPCTEI
Trigger: TATTTCCGTACATGGAGGCAAAAACCCCACTTTGCA...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTGCAAAGTGGGGTTTTaGCCTCCATGTACGGAAATA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETCKVGF*PPCTEI
Trigger: TATTTCCGTACATGGAGGCAAAAACCCCACTTTGCA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATTTCCCATGCTCGAGTaGTTTATTGCTTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAFPMLE*FIAFWL
Trigger: GAGCCAAAAAGCAATAAACAACTCGAGCATGGGAAA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS TCA 90 bp AGGCATTACAGAATTTGTAATTCCTTCATGAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCGAGAAGGTACTACTGGAGTTGCATT +
Preference number: 5 (lower is better)
Translates to: RHYRICNSFMRLISY*SWSCCPRRYYWSCI
Trigger: AATGCAACTCCAGTAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCTCATGAAGGAATTACAAATTCTGTAATGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp TGGACATTTGAATGGAAACTGGTTGGATTAATGATAACAGGGTTCTaGTTCACTGGTTTACTAGGAATAGGGTCAAGAATGCCAAGTGGA +
Preference number: 5 (lower is better)
Translates to: WTFEWKLVGLMITGF*FTGLLGIGSRMPSG
Trigger: TCCACTTGGCATTCTTGACCCTATTCCTAGTAAACCAGTGAATCAGAACCCTGTTATCATTAATCCAACCAGTTTCCATTCAAATGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp AAAGGAACAACAGCAGGAGGCATGCTTACATTCATCATAGGTACCTaGGAGTGGACATTTGAATGGAAACTGGTTGGATTAATGATAACA +
Preference number: 5 (lower is better)
Translates to: KGTTAGGMLTFIIGT*EWTFEWKLVGLMIT
Trigger: TGTTATCATTAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTACCTATGATGAATGTAAGCATGCCTCCTGCTGTTGTTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 90 bp AGCCTGGATCTCACTGTCTCTTTGAAGAGTTATAGTGAGTTACAGTaGGTCATTCCAGCTTCTGACATCTTACATGACATAGAAATACCT +
Preference number: 5 (lower is better)
Translates to: SLDLTVSLKSYSELQ*VIPASDILHDIEIP
Trigger: AGGTATTTCTATGTCATGTAAGATGTCAGAAGCTGGAATGACTCACTGTAACTCACTATAACTCTTCAAAGAGACAGTGAGATCCAGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTAGGGTTCTATGGATaGATGAAGGAAAATAGTGTG +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVALGFYG*MKENSV
Trigger: CACACTATTTTCCTTCATCAATCCATAGAACCCTAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACCAAGGTGTTGCAGGTaGGTTCATCTGATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPPRCCR*VHLMFS
Trigger: TGAAAACATCAGATGAACCAACCTGCAACACCTTGG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATCTGAATCCAAGGTGTaGCAGGTTGGTTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPSESKV*QVGSSD
Trigger: ATCAGATGAACCAACCTGCAACACCTTGGATTCAGA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTATAAAGCACTCCATTTaGATCCACACGACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFIKHSI*IHTTLP
Trigger: TGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTAT...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTACTGATCTTGGAGTaGCTGCCCGAGAAGGTACTA +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTLLILE*LPEKVL
Trigger: TAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCATATTTCTTACTGATCTaGGAGTTGCTGCCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPYFLLI*ELLPEK
Trigger: CTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATA...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCAGTCCTTGGAGAGATaGAACCATCTCCATATATCT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETQSLER*NHLHIS
Trigger: AGATATATGGAGATGGTTCAATCTCTCCAAGGACTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATACAGTCCTTGGAGAGATaGAACCATCTCCATATATCT +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAIQSLER*NHLHIS
Trigger: AGATATATGGAGATGGTTCAATCTCTCCAAGGACTG...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAAGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTG +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQDQVLQ*AMGDYL
Trigger: CAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTC...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTTTGCTAGCTGTGCTTaGGCTGCTGCTGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTFASCA*AAAESK
Trigger: TTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAAGGACGTTGAAATTCTaGACTGAGGTGGATTGGGAT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPRTLKF*TEVDWD
Trigger: ATCCCAATCCACCTCAGTCAAGAATTTCAACGTCCT...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTGACTATGACGCCATCTaGAAGAACAGATGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETDYDAI*KNRCCL
Trigger: AAGACAACATCTGTTCTTCAAGATGGCGTCATAGTC...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCTCACAAGGTGTATCTaGAAAAGGTGGAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETLTRCI*KRWKCS
Trigger: ACTACACTTCCACCTTTTCAAGATACACCTTGTGAG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCAATTTTCCAAACTATTaGAGGAACTTGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGNFPNY*RNLETA
Trigger: AGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATT...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGAATTTTCCAAACTATTaGAGGAACTTGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLNFPNY*RNLETA
Trigger: AGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATT...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTCACCCATTAACGCTTTaGGCATTAAAGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETHPLTL*ALKSPL
Trigger: CAATGGAGACTTTAATGCCAAAAGCGTTAATGGGTG...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CCTGTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTTTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 5 (lower is better)
Translates to: PVVVVAICHSLNIDITVAFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...AGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCTCATCACACAGAGACTTTGATTGGCTTTTCCAGCATTCATTATCCTTCCTGTTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 5 (lower is better)
Translates to: LSSHRDFDWLFQHSLSFLFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...CAGGAAGGATAATGAATGCTGGAAAAGCCAATCAAAGTCTCTGTGTGATGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAATGCAAAGTGGGGTTTTaGCCTCCATGTACGGAAATA +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQCKVGF*PPCTEI
Trigger: TATTTCCGTACATGGAGGCAAAAACCCCACTTTGCA...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp CTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTGATTGGCTTTAGTTTATTCTCCTaGTGCTTCCTAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: LSNLLTIDHSHHTETLIGFSLFS*CFLGLL
Trigger: TAACAGTCCTAGGAAGCACAAGGAGAATAAACTAAA...GCCAATCAAAGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS TCA 90 bp AATCTGAATCCAAGGTGTTGCAGGTTGGTTCATCTGATGTTTTCATaGCTTCAAAATTCCAATAATGTAGCCTTCTGGAGAGAAGTGATG +
Preference number: 5 (lower is better)
Translates to: NLNPRCCRLVHLMFS*LQNSNNVAFWREVM
Trigger: CATCACTTCTCTCCAGAAGGCTACATTATTGGAATTTTGAAGTCATGAAAACATCAGATGAACCAACCTGCAACACCTTGGATTCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000478804.3
ENST00000488372.5
ENST00000496158.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATTAGGGTTCTATGGATaGATGAAGGAAAATAGTGTG +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWALGFYG*MKENSV
Trigger: CACACTATTTTCCTTCATCAATCCATAGAACCCTAA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTCTGAATCCAAGGTGTaGCAGGTTGGTTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFSESKV*QVGSSD
Trigger: ATCAGATGAACCAACCTGCAACACCTTGGATTCAGA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTATTTCTTACTGATCTaGGAGTTGCTGCCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTYFLLI*ELLPEK
Trigger: CTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACAGTCCTTGGAGAGATaGAACCATCTCCATATATCT +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQQSLER*NHLHIS
Trigger: AGATATATGGAGATGGTTCAATCTCTCCAAGGACTG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCAGTTTGTGGTGGAACATaGCTCGTGGTATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPVCGGT*LVVFPY
Trigger: ATATGGAAATACCACGAGCAATGTTCCACCACAAAC...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp GAAGCACAAACTGAATTAGCTCAAAATACCAAAAAGAAGGCTTGGTCAACACAACAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EAQTELAQNTKKKAWSTQQVCFD*LAVLWL
Trigger: CAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTG...TTGTGTTGACCAAGCCTTCTTTTTGGTATTTTGAGCTAATTCAGTTTGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPQVCFD*LAVLWL
Trigger: CAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGT +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTAAVAD*EETSDC
Trigger: ACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GGTTGTATTTTTATTTATCACTTTACACTGGTAGTCTCTGGTAGGTGTACTCCACTCACAAGGTGTATCTaGAAAAGGTGGAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: GCIFIYHFTLVVSGRCTPLTRCI*KRWKCS
Trigger: ACTACACTTCCACCTTTTCAAGATACACCTTGTGAG...TGGAGTACACCTACCAGAGACTACCAGTGTAAAGTGATAAATAAAAATACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407073.5
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp ACTACATTGAAAAGTCTTGAGTCTTGCATTACACCATTCGGGCATAAATGGGCATTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 5 (lower is better)
Translates to: TTLKSLESCITPFGHKWAFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...TGCCCATTTATGCCCGAATGGTGTAATGCAAGACTCAAGACTTTTCAATGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCTACCAAAAAGAAGGCTaGGTCAACACAAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTYQKEG*VNTNSA
Trigger: GGCTGAGTTTGTGTTGACCAAGCCTTCTTTTTGGTA...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTCTCGTATGGCTTATTTaGCAGTTTGGAGTCCAATGG +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLVWLI*QFGVQW
Trigger: CCATTGGACTCCAAACTGCAAAATAAGCCATACGAG...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS TCA 90 bp TTCAGAACTACTTCACCAATGCAACACAATAGTGAGTTCAGAAGCTaGCCCATACACATATGGAAATACAATTATAAGACCAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: FRTTSPMQHNSEFRS*PIHIWKYNYKTKET
Trigger: TGTCTCCTTGGTCTTATAATTGTATTTCCATATGTGTATGGGTCAGCTTCTGAACTCACTATTGTGTTGCATTGGTGAAGTAGTTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637242.1
ENST00000637308.1
ENST00000638130.1
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGTTTGTGGTGGAACATaGCTCGTGGTATTTCCATAT +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFVCGGT*LVVFPY
Trigger: ATATGGAAATACCACGAGCAATGTTCCACCACAAAC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCGACTATGACGCCATCTaGAAGAACAGATGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTDYDAI*KNRCCL
Trigger: AAGACAACATCTGTTCTTCAAGATGGCGTCATAGTC...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTTCTCAGTAATCTCTaGACCATTGATCACTCTCAT +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETFLSNL*TIDHSH
Trigger: ATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTAATAGATCCCTTCTTTaGACAATCCATCAACTGAAG +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETNRSLL*TIHQLK
Trigger: CTTCAGTTGATGGATTGTCAAAAGAAGGGATCTATT...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp GTGGTGGTGGTAGCTATCTGCCATAGTCTAAATATTGATATAACTGTGGCTATAAATAGATCCCTTCTTTaGACAATCCATCAACTGAAG +
Preference number: 5 (lower is better)
Translates to: VVVVAICHSLNIDITVAINRSLL*TIHQLK
Trigger: CTTCAGTTGATGGATTGTCAAAAGAAGGGATCTATT...TATAGCCACAGTTATATCAATATTTAGACTATGGCAGATAGCTACCACCACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AAAGAGTTTCTCAGTAATCTCTTGACCATTGATCACTCTCATCACACAGAGACTTTTAGTTTATTCTCCTaGTGCTTCCTAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: KEFLSNLLTIDHSHHTETFSLFS*CFLGLL
Trigger: TAACAGTCCTAGGAAGCACAAGGAGAATAAACTAAA...AGTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS CCA 90 bp ATTGGCCATGAATTCTCAATTAATGAAGCCAGATTTGAGGTACATTaGGGTTCATTTTATTATCCTGTCAACTCCTCTGTTTCTGACTTT +
Preference number: 5 (lower is better)
Translates to: IGHEFSINEARFEVH*GSFYYPVNSSVSDF
Trigger: AAAGTCAGAAACAGAGGAGTTGACAGGATAATAAAATGAACCCCAATGTACCTCAAATCTGGCTTCATTAATTGAGAATTCATGGCCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638090.1
CDS CCA 90 bp CCAGTGTCTGAACACATTCCTTATTTTGGGAAATCTCAAAAAGTCTaGGATAGTCCCTTTCCTAGTTATTTGATTATTGATCATCAGTCA +
Preference number: 5 (lower is better)
Translates to: PVSEHIPYFGKSQKV*DSPFPSYLIIDHQS
Trigger: TGACTGATGATCAATAATCAAATAACTAGGAAAGGGACTATCCCAGACTTTTTGAGATTTCCCAAAATAAGGAATGTGTTCAGACACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635796.1
CDS TCA 90 bp GACCCATACACATATGGAAATACAATTATAAGACCAAGGAGACACTaGAAATCAATGGTAAAGAAAAACCTATTCAATAAACGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: DPYTYGNTIIRPRRH*KSMVKKNLFNKRPS
Trigger: GCTTGGCCGTTTATTGAATAGGTTTTTCTTTACCATTGATTTTCAGTGTCTCCTTGGTCTTATAATTGTATTTCCATATGTGTATGGGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000637242.1
ENST00000637308.1
ENST00000638130.1
CDS CCA 90 bp TATTTAGGTAGAAACACCAAAACAAAGATACGACCAATACACTTGTaGAATACAATTAAGATAGCTCTTCACATTAAACTGCAGGGACCA +
Preference number: 5 (lower is better)
Translates to: YLGRNTKTKIRPIHL*NTIKIALHIKLQGP
Trigger: TGGTCCCTGCAGTTTAATGTGAAGAGCTATCTTAATTGTATTCCACAAGTGTATTGGTCGTATCTTTGTTTTGGTGTTTCTACCTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTTAGGGTTCTATGGATaGATGAAGGAAAATAGTGTG +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFLGFYG*MKENSV
Trigger: CACACTATTTTCCTTCATCAATCCATAGAACCCTAA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp TTATGTAAAGTATACAATGGGAGGGAAGCACAAACTGAATTAGCTCAAAATACCAATTTTCCAAACTATTaGAGGAACTTGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: LCKVYNGREAQTELAQNTNFPNY*RNLETA
Trigger: AGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATT...GGTATTTTGAGCTAATTCAGTTTGTGCTTCCCTCCCATTGTATACTTTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407073.5
ENST00000642680.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTGGCTTATTTTGCAGTTaGGAGTCCAATGGTTATAAA +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFGLFCS*ESNGYK
Trigger: TTTATAACCATTGGACTCCAAACTGCAAAATAAGCC...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS-3UTR CAA 90 bp AGCTTATTATTAAAAACCTCAGCAGTTTTCTCATTCCCAGTAGCAATCTGGTTTTTTCTGAGGACTCTATaGCACAAAATACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SLLLKTSAVFSFPVAIWFFLRTL*HKIQVF
Trigger: AAAGACCTGTATTTTGTGCAATAGAGTCCTCAGAAA...AAACCAGATTGCTACTGGGAATGAGAAAACTGCTGAGGTTTTTAATAATAAGCT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS CCA 72 bp GGAGGAGGCGAAGGAGGAGGAGGAGAGCTGGGGAAGTaGCTGCTCCTGGGTGTAGTGAGATGTCTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GGGEGGGGELGK*LLLGVVRCLQP
Trigger: TGGCTGGAGACATCTCACTACACCCAGGAGCAGCCACTTCCCCAGCTCTCCTCCTCCTCCTTCGCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000470063.5
ENST00000473478.5
ENST00000478190.3
ENST00000635796.1
ENST00000637308.1
ENST00000637997.1
ENST00000638043.2
ENST00000638130.1
ENST00000642680.2
CDS TCA 72 bp CCTGGGCCACCCACAACGAGGCCATCCTTCACCTGTTaGCCAAGAGATGGGTCAATCCTCGGTTGCAACTCA +
Preference number: 6 (lower is better)
Translates to: PGPPTTRPSFTC*PRDGSILGCNS
Trigger: TGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp GGCTGCCACGGAATGGAGATTTCTGTCCATGTTCACTaGTGCCCAATCTCTGTCGGGGGTAGACAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: GCHGMEISVHVH*CPISVGGRQGG
Trigger: TCCACCCTGTCTACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp CACACGACGCTGCCAACCCACAGGAACTTGTATAGCTaGAAGACCTCCTTCCTTGTCCCCTCCGTCACACTC +
Preference number: 6 (lower is better)
Translates to: HTTLPTHRNLYS*KTSFLVPSVTL
Trigger: GAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGGTTGGCAGCGTCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp TCCTCCTCCGGGACTGGTGAGCACCAGAGAAGGATGTaGGGCTTCCATGCTTTTATGAAGTGTGGCCACTGC +
Preference number: 6 (lower is better)
Translates to: SSSGTGEHQRRM*GFHAFMKCGHC
Trigger: GCAGTGGCCACACTTCATAAAAGCATGGAAGCCCCACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp ACCTGGGCCACCCACAACGAGGCCATCCTTCACCTGTaGACCAAGAGATGGGTCAATCCTCGGTTGCAACTC +
Preference number: 6 (lower is better)
Translates to: TWATHNEAILHL*TKRWVNPRLQL
Trigger: GAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp GGAAGCATCACCTGGGCCACCCACAACGAGGCCATCCTTCACCTGTaGACCAAGAGATGGGTCAATCCTCGGTTGCAACTCACAAGGTGT +
Preference number: 6 (lower is better)
Translates to: GSITWATHNEAILHL*TKRWVNPRLQLTRC
Trigger: ACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp CCTCAACCTGAGTTCAAGAGATCCTCTCCAGCCTCCTaGGTAGCTGGGACTACAGTGTGCACCACACCAAGC +
Preference number: 6 (lower is better)
Translates to: PQPEFKRSSPAS*VAGTTVCTTPS
Trigger: GCTTGGTGTGGTGCACACTGTAGTCCCAGCTACTCAGGAGGCTGGAGAGGATCTCTTGAACTCAGGTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS GCA 72 bp GAGACTGCTCCTCTAGGACCAGGTCTTGCTTTGCAGTaGTTAGCAGCTCTCCAAATCCCCGACTCTGTCGAG +
Preference number: 6 (lower is better)
Translates to: ETAPLGPGLALQ*LAALQIPDSVE
Trigger: CTCGACAGAGTCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp TTGGCCGATGCCGAGTTCAGGACACCTCCCAACAGCTaGGGATTCAAGGTCATTAATCCTGAGGCCCCATTG +
Preference number: 6 (lower is better)
Translates to: LADAEFRTPPNS*GFKVINPEAPL
Trigger: CAATGGGGCCTCAGGATTAATGACCTTGAATCCCCAGCTGTTGGGAGGTGTCCTGAACTCGGCATCGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS CCA 72 bp AGTGGTTGCCTGGGAGGAGGTTGCTATGGAAACCTCTaGATGATTAGCGGTGTTGGCCGATGCCGAGTTCAG +
Preference number: 6 (lower is better)
Translates to: SGCLGGGCYGNL*MISGVGRCRVQ
Trigger: CTGAACTCGGCATCGGCCAACACCGCTAATCATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 72 bp CTACTGGAGTTGCATTTGTTCCTCCTCCGGGACTGGTaGGCACCAGAGAAGGATGTGGGGCTTCCATGCTTT +
Preference number: 6 (lower is better)
Translates to: LLELHLFLLRDW*APEKDVGLPCF
Trigger: AAAGCATGGAAGCCCCACATCCTTCTCTGGTGCTCACCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp TGCCACGGAATGGAGATTTCTGTCCATGTTCACTGCTaGCCAATCTCTGTCGGGGGTAGACAGGGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: CHGMEISVHVHC*PISVGGRQGGV
Trigger: AACTCCACCCTGTCTACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp GAGGAACTTGGAGACTGCTCCTCTAGGACCAGGTCTTaGTTTGCAGTGCTTAGCAGCTCTCCAAATCCCCGA +
Preference number: 6 (lower is better)
Translates to: EELGDCSSRTRS*FAVLSSSPNPR
Trigger: TCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp TATGGAAACCTCTGGATGATTAGCGGTGTTGGCCGATaGCGAGTTCAGGACACCTCCCAACAGCTGGGGATT +
Preference number: 6 (lower is better)
Translates to: YGNLWMISGVGR*RVQDTSQQLGI
Trigger: AATCCCCAGCTGTTGGGAGGTGTCCTGAACTCGGCATCGGCCAACACCGCTAATCATCCAGAGGTTTCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 72 bp CTGCTCCTCCAGAAAGGATTTGGCGCTCCAGTTCACTaGAATAGCTTCCTGCTTCATTCCCATCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLLQKGFGAPVH*NSFLLHSHQPG
Trigger: GCCAGGCTGATGGGAATGAAGCAGGAAGCTATTGCAGTGAACTGGAGCGCCAAATCCTTTCTGGAGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CCA 72 bp TCAGTCCTTGGAGAGATTGAACCATCTCCATATATCTaGGAACCTGATGACGCTGGGCTGGGCAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SVLGEIEPSPYI*EPDDAGLGRPP
Trigger: TGGAGGCCTGCCCAGCCCAGCGTCATCAGGTTCCCAGATATATGGAGATGGTTCAATCTCTCCAAGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp CGTGCTCCTGGCCAACAAAAGGAAAATCACTCCCAATaGGTAGCTGACTCTGCAGTGGGTTTCCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RAPGQQKENHSQ*VADSAVGFQLQ
Trigger: CTGCAGCTGGAAACCCACTGCAGAGTCAGCTACCCATTGGGAGTGATTTTCCTTTTGTTGGCCAGGAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp CTGGAATGGAGCAGTGGCTGCTCCTCCAGAAAGGATTaGGCGCTCCAGTTCACTGCAATAGCTTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LEWSSGCSSRKD*ALQFTAIASCF
Trigger: GAAGCAGGAAGCTATTGCAGTGAACTGGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CAA 90 bp AAGCACTCCATTTTGATCCACACGACGCTGCCAACCCACAGGAACTaGTATAGCTGGAAGACCTCCTTCCTTGTCCCCTCCGTCACACTC +
Preference number: 6 (lower is better)
Translates to: KHSILIHTTLPTHRN*YSWKTSFLVPSVTL
Trigger: GAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGGTTGGCAGCGTCGTGTGGATCAAAATGGAGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp GCACTCATGGCACTCAGAGCTGGAATGGGGCTGATCTaGGTTGTACTGTTGACTGCAGTGGTGATGACAACC +
Preference number: 6 (lower is better)
Translates to: ALMALRAGMGLI*VVLLTAVVMTT
Trigger: GGTTGTCATCACCACTGCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp CACTGGAGAGATTTAATGGGTCACCAATTGAGGCAGTaGAGGCACTCATGGCACTCAGAGCTGGAATGGGGC +
Preference number: 6 (lower is better)
Translates to: HWRDLMGHQLRQ*RHSWHSELEWG
Trigger: GCCCCATTCCAGCTCTGAGTGCCATGAGTGCCTTCACTGCCTCAATTGGTGACCCATTAAATCTCTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp CTGGTTAAAAGGGTCTCAGCTCGGCTGTTGTCTGACTaGTTGCTTGGCAAATGGTCTGGTGGGGCTGTCATC +
Preference number: 6 (lower is better)
Translates to: LVKRVSARLLSD*LLGKWSGGAVI
Trigger: GATGACAGCCCCACCAGACCATTTGCCAAGCAATCAGTCAGACAACAGCCGAGCTGAGACCCTTTTAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 72 bp TGTAGTGGTTGTGGTAGTGGTTGCCTGGGAGGAGGTTaGTATGGAAACCTCTGGATGATTAGCGGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: CSGCGSGCLGGG*YGNLWMISGVG
Trigger: GCCAACACCGCTAATCATCCAGAGGTTTCCATAGCAACCTCCTCCCAGGCAACCACTACCACAACCACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS CCA 72 bp AACTGCTTTGTAAATGGCATCTACGGAAGCATCACCTaGGCCACCCACAACGAGGCCATCCTTCACCTGTTG +
Preference number: 6 (lower is better)
Translates to: NCFVNGIYGSIT*ATHNEAILHLL
Trigger: CAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp AACTTGGAGACTGCTCCTCTAGGACCAGGTCTTGCTTaGCAGTGCTTAGCAGCTCTCCAAATCCCCGACTCT +
Preference number: 6 (lower is better)
Translates to: NLETAPLGPGLA*QCLAALQIPDS
Trigger: AGAGTCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp CGCTGCCAACCCACAGGAACTTGTATAGCTGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCTTTGCCTCCATTCATTTTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: RCQPTGTCIAGRPPS*SPPSHSLPPFIFCV
Trigger: GACACAGAAAATGAATGGAGGCAAAGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGGTTGGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp TATTTGAGGAACTTGGAGACTGCTCCTCTAGGACCAGGTCTTGCTTaGCAGTGCTTAGCAGCTCTCCAAATCCCCGACTCTGTCGAGGTC +
Preference number: 6 (lower is better)
Translates to: YLRNLETAPLGPGLA*QCLAALQIPDSVEV
Trigger: GACCTCGACAGAGTCGGGGATTTGGAGAGCTGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp GGCTGGTTAAAAGGGTCTCAGCTCGGCTGTTGTCTGACTGATTGCTaGGCAAATGGTCTGGTGGGGCTGTCATCTGTGTTAATGAGGGTA +
Preference number: 6 (lower is better)
Translates to: GWLKGSQLGCCLTDC*ANGLVGLSSVLMRV
Trigger: TACCCTCATTAACACAGATGACAGCCCCACCAGACCATTTGCCAAGCAATCAGTCAGACAACAGCCGAGCTGAGACCCTTTTAACCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 72 bp ACTCCTTGGCTCAAGCCATTCGCCCGCTTCAGCCTCTaGATAGCTAGAATTATAGGCACACATCACCATGCC +
Preference number: 6 (lower is better)
Translates to: TPWLKPFARFSL*IARIIGTHHHA
Trigger: GGCATGGTGATGTGTGCCTATAATTCTAGCTATTCAGAGGCTGAAGCGGGCGAATGGCTTGAGCCAAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638090.1
CDS GCA 72 bp AGCTGGAATGGGGCTGATCTGAGTTGTACTGTTGACTaGAGTGGTGATGACAACCTGCATTCCTTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SWNGADLSCTVD*SGDDNLHSFAG
Trigger: GCCAGCAAAGGAATGCAGGTTGTCATCACCACTGCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp TTAAAAGGGTCTCAGCTCGGCTGTTGTCTGACTGATTaGTTGGCAAATGGTCTGGTGGGGCTGTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: LKGSQLGCCLTD*LANGLVGLSSV
Trigger: CACAGATGACAGCCCCACCAGACCATTTGCCAAGCAATCAGTCAGACAACAGCCGAGCTGAGACCCTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS GCA 72 bp AAGGATTTGGCGCTCCAGTTCACTGCAATAGCTTCCTaGTTCATTCCCATCAGCCTGGCCTCTATAGGCATG +
Preference number: 6 (lower is better)
Translates to: KDLALQFTAIAS*FIPISLASIGM
Trigger: CATGCCTATAGAGGCCAGGCTGATGGGAATGAAGCAGGAAGCTATTGCAGTGAACTGGAGCGCCAAATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS GCA 72 bp CTGCCTTGCAACAATTATCTGGAATGGAGCAGTGGCTaGTCCTCCAGAAAGGATTTGGCGCTCCAGTTCACT +
Preference number: 6 (lower is better)
Translates to: LPCNNYLEWSSG*SSRKDLALQFT
Trigger: AGTGAACTGGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CCA 72 bp CACAACGAGGCCATCCTTCACCTGTTGACCAAGAGATaGGTCAATCCTCGGTTGCAACTCACAAGGTGTATC +
Preference number: 6 (lower is better)
Translates to: HNEAILHLLTKR*VNPRLQLTRCI
Trigger: GATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp TTCCTTTGCTGGCTGCATCGACAACTGCTTTGTAAATaGCATCTACGGAAGCATCACCTGGGCCACCCACAA +
Preference number: 6 (lower is better)
Translates to: FLCWLHRQLLCK*HLRKHHLGHPQ
Trigger: TTGTGGGTGGCCCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp AGGCCAACATTCCTGCCTTGCAACAATTATCTGGAATaGAGCAGTGGCTGCTCCTCCAGAAAGGATTTGGCG +
Preference number: 6 (lower is better)
Translates to: RPTFLPCNNYLE*SSGCSSRKDLA
Trigger: CGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAGGAATGTTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CAA 72 bp CCCACAGGAACTTGTATAGCTGGAAGACCTCCTTCCTaGTCCCCTCCGTCACACTCTTTGCCTCCATTCATT +
Preference number: 6 (lower is better)
Translates to: PTGTCIAGRPPS*SPPSHSLPPFI
Trigger: AATGAATGGAGGCAAAGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp CAAAGACCCACTGGGACTGACATAAAGCACTCCATTTaGATCCACACGACGCTGCCAACCCACAGGAACTTG +
Preference number: 6 (lower is better)
Translates to: QRPTGTDIKHSI*IHTTLPTHRNL
Trigger: CAAGTTCCTGTGGGTTGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTATGTCAGTCCCAGTGGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp CCTTCAGTGTTGCCACTGCCGGCAACAGCTCCAGAATaGCTACTGCTGCTACTGTTGTTACCAGCAAGTTTG +
Preference number: 6 (lower is better)
Translates to: PSVLPLPATAPE*LLLLLLLPASL
Trigger: CAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp CTTCAGTGTTGCCACTGCCGGCAACAGCTCCAGAATTaGTACTGCTGCTACTGTTGTTACCAGCAAGTTTGT +
Preference number: 6 (lower is better)
Translates to: LQCCHCRQQLQN*YCCYCCYQQVC
Trigger: ACAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp GACATCAGCTTATCTCTTAGTGCTGCTCGACCACTTTaGCCTTCACCTGTTGGGAGAAGCATGTTGGCAGTA +
Preference number: 6 (lower is better)
Translates to: DISLSLSAARPL*PSPVGRSMLAV
Trigger: TACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAAGTGGTCGAGCAGCACTAAGAGATAAGCTGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp GACAACCTGCATTCCTTTGCTGGCTGCATCGACAACTaGTTTGTAAATGGCATCTACGGAAGCATCACCTGG +
Preference number: 6 (lower is better)
Translates to: DNLHSFAGCIDN*FVNGIYGSITW
Trigger: CCAGGTGATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp ATTCCTGCCTTGCAACAATTATCTGGAATGGAGCAGTaGCTGCTCCTCCAGAAAGGATTTGGCGCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: IPALQQLSGMEQ*LLLQKGFGAPV
Trigger: AACTGGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CAA 72 bp CTAGCTGTGCTTTGGCTGCTGCTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCATTGTGCTGGTTCAAGA +
Preference number: 6 (lower is better)
Translates to: LAVLWLLLRVNY*LERRQHCAGSR
Trigger: TCTTGAACCAGCACAATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp CGACCACTTTGCCCTTCACCTGTTGGGAGAAGCATGTaGGCAGTAGGAGGGAACATGGTGTTTAAAGTGCTA +
Preference number: 6 (lower is better)
Translates to: RPLCPSPVGRSM*AVGGNMVFKVL
Trigger: TAGCACTTTAAACACCATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAAGTGGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp ACGTCGTCTTCTCTTACTAATTTTCCAGGCCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAGTCGCCAACATTGAACGTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: TSSSLTNFPGQEVSP*IWPQTKSPTLNVLG
Trigger: ACCAAGGACGTTCAATGTTGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTGGCCTGGAAAATTAGTAAGAGAAGACGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp AACAATTATCTGGAATGGAGCAGTGGCTGCTCCTCCAGAAAGGATTaGGCGCTCCAGTTCACTGCAATAGCTTCCTGCTTCATTCCCATC +
Preference number: 6 (lower is better)
Translates to: NNYLEWSSGCSSRKD*ALQFTAIASCFIPI
Trigger: GATGGGAATGAAGCAGGAAGCTATTGCAGTGAACTGGAGCGCCAAATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS TCA 72 bp CTGTTAGTGTCTTCAACTTCTCGGGCTCCACCTGAGTaGAGGTATGAAGACCAAACCACATTACCCAGACCT +
Preference number: 6 (lower is better)
Translates to: LLVSSTSRAPPE*RYEDQTTLPRP
Trigger: AGGTCTGGGTAATGTGGTTTGGTCTTCATACCTTCACTCAGGTGGAGCCCGAGAAGTTGAAGACACTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638043.2
CDS GCA 72 bp TGCAGTGGTGATGACAACCTGCATTCCTTTGCTGGCTaGATCGACAACTGCTTTGTAAATGGCATCTACGGA +
Preference number: 6 (lower is better)
Translates to: CSGDDNLHSFAG*IDNCFVNGIYG
Trigger: TCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp GGACAATATGGTAACACTAGGCCAACATTCCTGCCTTaGAACAATTATCTGGAATGGAGCAGTGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GQYGNTRPTFLP*NNYLEWSSGCS
Trigger: GGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAGGAATGTTGGCCTAGTGTTACCATATTGTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CCA 72 bp ACTAATTTTCCAGGCCAGGAAGTCAGTCCTTTGATTTaGCCCCAGACCAAGTCGCCAACATTGAACGTCCTT +
Preference number: 6 (lower is better)
Translates to: TNFPGQEVSPLI*PQTKSPTLNVL
Trigger: AAGGACGTTCAATGTTGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTGGCCTGGAAAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp ACACTAGGCCAACATTCCTGCCTTGCAACAATTATCTaGAATGGAGCAGTGGCTGCTCCTCCAGAAAGGATT +
Preference number: 6 (lower is better)
Translates to: TLGQHSCLATII*NGAVAAPPERI
Trigger: AATCCTTTCTGGAGGAGCAGCCACTGCTCCATTCCAGATAATTGTTGCAAGGCAGGAATGTTGGCCTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627651.2
ENST00000637159.1
CDS CAA 72 bp ATGGAAGCTGCAGTCACACTGAAACAGCAAACTTCATaGAGTGTCCAAAGGCAGCAGAACCCAGTGGCATGT +
Preference number: 6 (lower is better)
Translates to: MEAAVTLKQQTS*SVQRQQNPVAC
Trigger: ACATGCCACTGGGTTCTGCTGCCTTTGGACACTCAATGAAGTTTGCTGTTTCAGTGTGACTGCAGCTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635796.1
CDS CAA 90 bp AGTGGGCCAGTGCAGCACAGTTTTTCCCAGACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTTTGGAACCAAGTCCTTGAAATATGC +
Preference number: 6 (lower is better)
Translates to: SGPVQHSFSQTVQNA*GSFSSVWNQVLEIC
Trigger: GCATATTTCAAGGACTTGGTTCCAAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGTCTGGGAAAAACTGTGCTGCACTGGCCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp CCTGGAGATTCTGGTACCCCTGGAGAAGTTGCTGCTGTTGCTGATTaGGAGGAAACATCTGATTGTTGTTTAACAGCGACTGTAGATGAG +
Preference number: 6 (lower is better)
Translates to: PGDSGTPGEVAAVAD*EETSDCCLTATVDE
Trigger: CTCATCTACAGTCGCTGTTAAACAACAATCAGATGTTTCCTCCAAATCAGCAACAGCAGCAACTTCTCCAGGGGTACCAGAATCTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000496893.3
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp AAAGCAGCGTTTACATTCGGGTTGAGAAAACCTAAAGGGTGGAGGTaGATCTCAGACTTGCCTTCTCCTGCTGAAGGCTGGAGGATATTT +
Preference number: 6 (lower is better)
Translates to: KAAFTFGLRKPKGWR*ISDLPSPAEGWRIF
Trigger: AAATATCCTCCAGCCTTCAGCAGGAGAAGGCAAGTCTGAGATCAACCTCCACCCTTTAGGTTTTCTCAACCCGAATGTAAACGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 72 bp GTGTTTGGATTCTCAGGAAGTGCTGTGAGCCCAGGCTaGGTGCTTATTCTTTTGTTTAGGAGAGCTGCATCT +
Preference number: 6 (lower is better)
Translates to: VFGFSGSAVSPG*VLILLFRRAAS
Trigger: AGATGCAGCTCTCCTAAACAAAAGAATAAGCACTCAGCCTGGGCTCACAGCACTTCCTGAGAATCCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp TGCCACTGCCGGCAACAGCTCCAGAATTGCTACTGCTaGTACTGTTGTTACCAGCAAGTTTGTTTTGATTTG +
Preference number: 6 (lower is better)
Translates to: CHCRQQLQNCYC*YCCYQQVCFDL
Trigger: CAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp TGCAGCACAGTTTTTCCCAGACTGTACAAAACGCATTaGGAAGCTTCAGCTCAGTTTGGAACCAAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: CSTVFPRLYKTH*EASAQFGTKSL
Trigger: CAAGGACTTGGTTCCAAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGTCTGGGAAAAACTGTGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp TGCTTCATTCCCATCAGCCTGGCCTCTATAGGCATGTaGGTTTCCAACTTCTTCTGGAGAGAAGTGATGAAA +
Preference number: 6 (lower is better)
Translates to: CFIPISLASIGM*VSNFFWREVMK
Trigger: TTTCATCACTTCTCTCCAGAAGAAGTTGGAAACCCACATGCCTATAGAGGCCAGGCTGATGGGAATGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627651.2
CDS CAA 72 bp GTGCAGCACAGTTTTTCCCAGACTGTACAAAACGCATaGGGAAGCTTCAGCTCAGTTTGGAACCAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: VQHSFSQTVQNA*GSFSSVWNQVL
Trigger: AAGGACTTGGTTCCAAACTGAGCTGAAGCTTCCCAATGCGTTTTGTACAGTCTGGGAAAAACTGTGCTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp CTTCACCTGTTGACCAAGAGATGGGTCAATCCTCGGTaGCAACTCACAAGGTGTATCTTGAAAAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LHLLTKRWVNPR*QLTRCILKRWK
Trigger: CTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp TCTCTTACTAATTTTCCAGGCCAGGAAGTCAGTCCTTaGATTTGGCCCCAGACCAAGTCGCCAACATTGAAC +
Preference number: 6 (lower is better)
Translates to: SLTNFPGQEVSP*IWPQTKSPTLN
Trigger: GTTCAATGTTGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTGGCCTGGAAAATTAGTAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000630352.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp CTCTTTGTACATGACTCCCATGATTCATGTGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTGGCAAAGGAACAACAGCAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: LFVHDSHDSCDQVLQ*AMGDYLAKEQQQEA
Trigger: TGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATGGGAGTCATGTACAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp ACCAAGAGATGGGTCAATCCTCGGTTGCAACTCACAAGGTGTATCTaGAAAAGGTGGAAGTGTAGTGTTTGGATTCTCAGGAAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: TKRWVNPRLQLTRCI*KRWKCSVWILRKCC
Trigger: ACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCCATCTCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp ACATTCGGGTTGAGAAAACCTAAAGGGTGGAGGTTGATCTCAGACTaGCCTTCTCCTGCTGAAGGCTGGAGGATATTTAATAGATTCTGG +
Preference number: 6 (lower is better)
Translates to: TFGLRKPKGWRLISD*PSPAEGWRIFNRFW
Trigger: CCAGAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGAAGGCAAGTCTGAGATCAACCTCCACCCTTTAGGTTTTCTCAACCCGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS CAA 90 bp TCCATGTCACTGGAGAGAAAAGCTAAAGCAGCGTTTACATTCGGGTaGAGAAAACCTAAAGGGTGGAGGTTGATCTCAGACTTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: SMSLERKAKAAFTFG*RKPKGWRLISDLPS
Trigger: AGAAGGCAAGTCTGAGATCAACCTCCACCCTTTAGGTTTTCTCAACCCGAATGTAAACGCTGCTTTAGCTTTTCTCTCCAGTGACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS TCA 72 bp GGGTCAATCCTCGGTTGCAACTCACAAGGTGTATCTTaGAAAGGTGGAAGTGTAGTGTTTGGATTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: GSILGCNSQGVS*KGGSVVFGFSG
Trigger: TCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGGATTGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp GTGACCAGGTTTTACAGTTGGCAATGGGAGATTACTTaGCAAAGGAACAACAGCAGGAGGCATGCTTACATT +
Preference number: 6 (lower is better)
Translates to: VTRFYSWQWEIT*QRNNSRRHAYI
Trigger: AATGTAAGCATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp CCTCGGTTGCAACTCACAAGGTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATTCTCAGGAAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: PRLQLTRCILKR*KCSVWILRKCC
Trigger: ACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGAGTTGCAACCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp AACTTCTCGGGCTCCACAAGGTGTATCTTGAAAAGGTaGAAGTGTAGTGTTTGGATTCTCAGGAAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: NFSGSTRCILKR*KCSVWILRKCC
Trigger: ACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTGTGGAGCCCGAGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629878.2
CDS CAA 72 bp CTGGAGAGAAAAGCTAAAGCAGCGTTTACATTCGGGTaGAGAAAACCTAAAGGGTGGAGGTTGATCTCAGAC +
Preference number: 6 (lower is better)
Translates to: LERKAKAAFTFG*RKPKGWRLISD
Trigger: GTCTGAGATCAACCTCCACCCTTTAGGTTTTCTCAACCCGAATGTAAACGCTGCTTTAGCTTTTCTCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416015.2
ENST00000642680.2
CDS CAA 72 bp GAAAAAGCTCATCTATCTGACATAAAGCACTCCATTTaGATCCACACGACGCTGCCAACCCACAGGAACTTG +
Preference number: 6 (lower is better)
Translates to: EKAHLSDIKHSI*IHTTLPTHRNL
Trigger: CAAGTTCCTGTGGGTTGGCAGCGTCGTGTGGATCAAAATGGAGTGCTTTATGTCAGATAGATGAGCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637159.1
CDS CAA 90 bp TTTGATTTGCTAGCTGTGCTTTGGCTGCTGCTGAGAGTAAACTACTaGCTGGAAAGGAGGCAGCATTGTGCTGGTTCAAGATCTGATTTA +
Preference number: 6 (lower is better)
Translates to: FDLLAVLWLLLRVNY*LERRQHCAGSRSDL
Trigger: TAAATCAGATCTTGAACCAGCACAATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp TGGCAGTGCACGGCTTCCCCTCTTAAAGGTATGTTCTaGAGAACACTAGAGTTCATACTGGGATCTGTAAAA +
Preference number: 6 (lower is better)
Translates to: WQCTASPLKGMF*RTLEFILGSVK
Trigger: TTTTACAGATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGCACTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp AGAGAATTTTCCAAACTATTTGAGGAACTTGGAGACTaGTCCTCTAGGACCAGGTCTTGCTTTGCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: REFSKLFEELGD*SSRTRSCFAVL
Trigger: AAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000496893.3
ENST00000628572.2
ENST00000638043.2
ENST00000642680.2
CDS GCA 72 bp TCACCACTCAGGAGTCTATTTATCTTCACAAGATACTaGACCAGCAGAGGCATCCCCACCTTCTTTTTAACT +
Preference number: 6 (lower is better)
Translates to: SPLRSLFIFTRY*TSRGIPTFFLT
Trigger: AGTTAAAAAGAAGGTGGGGATGCCTCTGCTGGTGCAGTATCTTGTGAAGATAAATAGACTCCTGAGTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS GCA 72 bp TTTTGTGAGAGTGAGGCAGAGGTTACTCATGGAAGCTaGAGTCACACTGAAACAGCAAACTTCATTGAGTGT +
Preference number: 6 (lower is better)
Translates to: FCESEAEVTHGS*SHTETANFIEC
Trigger: ACACTCAATGAAGTTTGCTGTTTCAGTGTGACTGCAGCTTCCATGAGTAACCTCTGCCTCACTCTCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635796.1
CDS CCA 72 bp ATGACTCCCATGATTCATGTGACCAGGTTTTACAGTTaGCAATGGGAGATTACTTGGCAAAGGAACAACAGC +
Preference number: 6 (lower is better)
Translates to: MTPMIHVTRFYS*QWEITWQRNNS
Trigger: GCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATGGGAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp CATGACTCCCATGATTCATGTGACCAGGTTTTACAGTaGGCAATGGGAGATTACTTGGCAAAGGAACAACAG +
Preference number: 6 (lower is better)
Translates to: HDSHDSCDQVLQ*AMGDYLAKEQQ
Trigger: CTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATGGGAGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp TGCTGCTACTGTTGTTACCAGCAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTGCTGCTGAGAGTAAAC +
Preference number: 6 (lower is better)
Translates to: CCYCCYQQVCFD*LAVLWLLLRVN
Trigger: GTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp AATTGCTACTGCTGCTACTGTTGTTACCAGCAAGTTTGTTTTGATTaGCTAGCTGTGCTTTGGCTGCTGCTGAGAGTAAACTACTTGCTG +
Preference number: 6 (lower is better)
Translates to: NCYCCYCCYQQVCFD*LAVLWLLLRVNYLL
Trigger: CAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAATCAAAACAAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000628572.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp ACAGCAGGAGGCATGCTTACATTCATCATAGGTACCTaGGAGTGGACATTTGAATGGAAACTGGTTGGATTA +
Preference number: 6 (lower is better)
Translates to: TAGGMLTFIIGT*EWTFEWKLVGL
Trigger: TAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTACCTATGATGAATGTAAGCATGCCTCCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000416015.2
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp CTACAGTGTGCACCACACCAAGCTCAGCTACTATTTTaGTTTTGTAGGGATCAGATCTCACTACATTGCACA +
Preference number: 6 (lower is better)
Translates to: LQCAPHQAQLLF*FCRDQISLHCT
Trigger: TGTGCAATGTAGTGAGATCTGATCCCTACAAAATCAAAATAGTAGCTGAGCTTGGTGTGGTGCACACTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS TCA 72 bp AGTCTCCATATTTGTACTTATTTTGTTGCAGACCAGTaGCAGCTTACGGATCACCACTGTGATTCATGGGAC +
Preference number: 6 (lower is better)
Translates to: SLHICTYFVADQ*QLTDHHCDSWD
Trigger: GTCCCATGAATCACAGTGGTGATCCGTAAGCTGTCACTGGTCTGCAACAAAATAAGTACAAATATGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637242.1
CDS TCA 72 bp ATCAGCAATAAGATGATATCCTTATATTACAGAGCATaGTGGCCTTCAAAAGTGGGCCAGTGCAGCACAGTT +
Preference number: 6 (lower is better)
Translates to: ISNKMISLYYRA*WPSKVGQCSTV
Trigger: AACTGTGCTGCACTGGCCCACTTTTGAAGGCCATCATGCTCTGTAATATAAGGATATCATCTTATTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp AAAGTACAGAGACTCCCATATACCCCTTGCTTCCTGTaGTGGTTAATACTGAGTATCAACTTGACTGGATTG +
Preference number: 6 (lower is better)
Translates to: KVQRLPYTPCFL*WLILSINLTGL
Trigger: CAATCCAGTCAAGTTGATACTCAGTATTAACCATCACAGGAAGCAAGGGGTATATGGGAGTCTCTGTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638090.1
CDS TCA 72 bp TGTTGCAGACCAGTGACAGCTTACGGATCACCACTGTaGTTCATGGGACACATTTTAGAAAGTATTGTTCTA +
Preference number: 6 (lower is better)
Translates to: CCRPVTAYGSPL*FMGHILESIVL
Trigger: TAGAACAATACTTTCTAAAATGTGTCCCATGAATCACAGTGGTGATCCGTAAGCTGTCACTGGTCTGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637242.1
CDS GCA 72 bp TTAACATACATACATAGGCTCACATTACATCTAGCATaGTGTCTTATCCCAGGCACTAGAGAATATTCGCCC +
Preference number: 6 (lower is better)
Translates to: LTYIHRLTLHLA*CLIPGTREYSP
Trigger: GGGCGAATATTCTCTAGTGCCTGGGATAAGACAGCATGCTAGATGTAATGTGAGCCTATGTATGTATGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637445.1
CDS CAA 90 bp TGTGATATGTGTGCTTTTGTTTGTCCTACTAAACTATATGCTTCTTaGAGGCCGGGTGATAACAGATTCATCTTCTTGGGTCCCCGAAAA +
Preference number: 6 (lower is better)
Translates to: CDMCAFVCPTKLYAS*RPGDNRFIFLGPRK
Trigger: TTTTCGGGGACCCAAGAAGATGAATCTGTTATCACCCGGCCTCAAAGAAGCATATAGTTTAGTAGGACAAACAAAAGCACACATATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637445.1
CDS TCA 72 bp AGAATTTGTAATTCCTTCATGAGACTTATTTCTTACTaGTCTTGGAGTTGCTGCCCGAGAAGGTACTACTGG +
Preference number: 6 (lower is better)
Translates to: RICNSFMRLISY*SWSCCPRRYYW
Trigger: CCAGTAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTAAGAAATAAGTCTCATGAAGGAATTACAAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000638043.2
ENST00000642680.2
CDS CCA 72 bp GACACAAAAGCCAGGGACAGAGAAACAGCAAAACAATaGAAACTCTCATACTCTGATGGTGGGAATATAATA +
Preference number: 6 (lower is better)
Translates to: DTKARDRETAKQ*KLSYSDGGNII
Trigger: TATTATATTCCCACCATCAGAGTATGAGAGTTTCCATTGTTTTGCTGTTTCTCTGTCCCTGGCTTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637242.1
CDS TCA 72 bp TCTGCTAGGGACTCTCCAAAGATATCAGCAATAAGATaGTATCCTTATATTACAGAGCATGATGGCCTTCAA +
Preference number: 6 (lower is better)
Translates to: SARDSPKISAIR*YPYITEHDGLQ
Trigger: TTGAAGGCCATCATGCTCTGTAATATAAGGATATCATCTTATTGCTGATATCTTTGGAGAGTCCCTAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000627651.2
ENST00000629878.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS TCA 72 bp CTCACTGTCTCTTTGAAGAGTTATAGTGAGTTACAGTaGGTCATTCCAGCTTCTGACATCTTACATGACATA +
Preference number: 6 (lower is better)
Translates to: LTVSLKSYSELQ*VIPASDILHDI
Trigger: TATGTCATGTAAGATGTCAGAAGCTGGAATGACTCACTGTAACTCACTATAACTCTTCAAAGAGACAGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS TCA 72 bp ACTTCACCAATGCAACACAATAGTGAGTTCAGAAGCTaGCCCATACACATATGGAAATACAATTATAAGACC +
Preference number: 6 (lower is better)
Translates to: TSPMQHNSEFRS*PIHIWKYNYKT
Trigger: GGTCTTATAATTGTATTTCCATATGTGTATGGGTCAGCTTCTGAACTCACTATTGTGTTGCATTGGTGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637242.1
ENST00000637308.1
ENST00000638130.1
CDS CAA 72 bp AACTTTCTCTTTATCTTCCAATCTGAATCCAAGGTGTaGCAGGTTGGTTCATCTGATGTTTTCATGACTTCA +
Preference number: 6 (lower is better)
Translates to: NFLFIFQSESKV*QVGSSDVFMTS
Trigger: TGAAGTCATGAAAACATCAGATGAACCAACCTGCAACACCTTGGATTCAGATTGGAAGATAAAGAGAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000407073.5
ENST00000478804.3
ENST00000488372.5
ENST00000496158.5
ENST00000627651.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 90 bp AATGAAACAAGATTGGCCATGAATTCTCAATTAATGAAGCCAGATTaGAGGTACATTGGGGTTCATTTTATTATCCTGTCAACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: NETRLAMNSQLMKPD*RYIGVHFIILSTPL
Trigger: CAGAGGAGTTGACAGGATAATAAAATGAACCCCAATGTACCTCAAATCTGGCTTCATTAATTGAGAATTCATGGCCAATCTTGTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638090.1
CDS CAA 90 bp TGGGATTTGCTTCAGAATAATACAGGGGGTATAAATGAAACAAGATaGGCCATGAATTCTCAATTAATGAAGCCAGATTTGAGGTACATT +
Preference number: 6 (lower is better)
Translates to: WDLLQNNTGGINETR*AMNSQLMKPDLRYI
Trigger: AATGTACCTCAAATCTGGCTTCATTAATTGAGAATTCATGGCCAATCTTGTTTCATTTATACCCCCTGTATTATTCTGAAGCAAATCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638090.1
CDS TCA 72 bp GTACTTGTAAACTTTCAGAAATTTTCCATTAGTCTGTaGAGCTATCAGGGCCATAATTTTACCATCGCTTAC +
Preference number: 6 (lower is better)
Translates to: VLVNFQKFSISL*SYQGHNFTIAY
Trigger: GTAAGCGATGGTAAAATTATGGCCCTGATAGCTTCACAGACTAATGGAAAATTTCTGAAAGTTTACAAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478190.3
CDS TCA 72 bp CTCAAAAAGTCTGGGATAGTCCCTTTCCTAGTTATTTaGTTATTGATCATCAGTCATGTGACCTTTGTTAAC +
Preference number: 6 (lower is better)
Translates to: LKKSGIVPFLVI*LLIISHVTFVN
Trigger: GTTAACAAAGGTCACATGACTGATGATCAATAATCAAATAACTAGGAAAGGGACTATCCCAGACTTTTTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635796.1
CDS CAA 72 bp TTTCCTTGGTCCTTTAGTGCTTATCTTCTAAAGATCTaGTCTGTAAACCATAAAGCCTTCAATGTCTACTTC +
Preference number: 6 (lower is better)
Translates to: FPWSFSAYLLKI*SVNHKAFNVYF
Trigger: GAAGTAGACATTGAAGGCTTTATGGTTTACAGACAAGATCTTTAGAAGATAAGCACTAAAGGACCAAGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000407073.5
ENST00000473478.5
ENST00000496158.5
ENST00000627651.2
ENST00000635796.1
ENST00000636620.1
ENST00000637445.1
ENST00000638043.2
ENST00000638090.1
ENST00000642680.2
CDS CAA 72 bp GGTGGGGAGTGTAAAGTTTTTAGTTCAACATTTGTCTaGAACCTTGATGTTGTACTAAGACAATCTCTATTG +
Preference number: 6 (lower is better)
Translates to: GGECKVFSSTFV*NLDVVLRQSLL
Trigger: CAATAGAGATTGTCTTAGTACAACATCAAGGTTCAAGACAAATGTTGAACTAAAAACTTTACACTCCCCACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407073.5
ENST00000488372.5
ENST00000627651.2
ENST00000637159.1
ENST00000638043.2
ENST00000642680.2
CDS CAA 72 bp AGATTGGCCATGAATTCTCAATTAATGAAGCCAGATTaGAGGTACATTGGGGTTCATTTTATTATCCTGTCA +
Preference number: 6 (lower is better)
Translates to: RLAMNSQLMKPD*RYIGVHFIILS
Trigger: TGACAGGATAATAAAATGAACCCCAATGTACCTCAAATCTGGCTTCATTAATTGAGAATTCATGGCCAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638090.1