RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000129071

Ensembl transcript IDs: ENST00000249910.5, ENST00000393278.6, ENST00000429544.7, ENST00000503197.5, ENST00000505883.1, ENST00000507208.1, ENST00000509587.1, ENST00000509828.1, ENST00000511009.1, ENST00000515266.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTCTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 2 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCLDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
3UTR-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGGCTGGAAAGGTGGTTaGTTGTACTTAATTAAGCTT +
Preference number: 2 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGGWKGG*LYLIKL
Trigger: AAGCTTAATTAAGTACAACCAACCACCTTTCCAGCC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
3UTR-3UTR TCA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 2 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
3UTR-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAGGCTGGAAAGGTGGTTaGTTGTACTTAATTAAGCTT +
Preference number: 2 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTGWKGG*LYLIKL
Trigger: AAGCTTAATTAAGTACAACCAACCACCTTTCCAGCC...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
3UTR-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGGCTGGAAAGGTGGTTaGTTGTACTTAATTAAGCTT +
Preference number: 2 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTGWKGG*LYLIKL
Trigger: AAGCTTAATTAAGTACAACCAACCACCTTTCCAGCC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
3UTR CCA 72 bp ACCACTGGAGATGAGTCAGAGGCCACGCCGCTGGACTaGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAA +
Preference number: 3 (lower is better)
Translates to: TTGDESEATPLD*SLWTWERLLIK
Trigger: TTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
3UTR-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAAGCAAAGATCCACCATaGGCACACACATTAAGAAAG +
Preference number: 3 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTSKDPP*AHTLRK
Trigger: CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCT...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
3UTR-3UTR CAA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTTATTCATCTGAGAACTaGACAATGGTTTTTGCCCGA +
Preference number: 3 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCYSSEN*TMVFAR
Trigger: TCGGGCAAAAACCATTGTCAAGTTCTCAGATGAATA...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp CCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAAATCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PLDWSLWTWERLLIKNPKSPAQS*PSSRVR
Trigger: CCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGA...TTTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp CAAACCACTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTGCCACGCCGCTGGACTaGTCTTTGTGGACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QTTGDESEATPLDWSLWTATPLD*SLWTWE
Trigger: CTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGC...AGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAGTGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACCCGAGGTCTGAATGTTaGGAAAGCGCCCCAGACGCC +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDPRSEC*ESAPDA
Trigger: GGCGTCTGGGGCGCTTTCGCAACATTCAGACCTCGG...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp CAAACCACTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: QTTGDESEATPLDWSLWTATPRV*GGVRCE
Trigger: TTCACATCTTACTCCGCCCCACACCCTGGGCGTTGC...AGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAGTGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
3UTR CAA 72 bp GGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTaGTGGACTTGGGAGCGCCTACTGATCAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: GDESEATPLDWS*WTWERLLIKNP
Trigger: GGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp AAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGCTGCAACCGAGGTCTaGATGTTGCGAAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: KTHMPPASPQPGTQLFVTAATEV*MLRKRP
Trigger: GGGGCGCTTTCGCAACATTCAGACCTCGGTTGCAGC...AGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACTGGACTGGTCTTTGTaGACTTGGGAGCGCCTACTG +
Preference number: 4 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKLDWSL*TWERLL
Trigger: CAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAG...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp TGGTGTACTTTTGACAGGAGGAAAACCACGTCAGGCTTAGAGATAGCACACAAACGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: WCTFDRRKTTSGLEIAHKRAGSG*SNEPSA
Trigger: GGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCG...TTTGTGTGCTATCTCTAAGCCTGACGTGGTTTTCCTCCTGTCAAAAGTACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp AAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTCAGAGGCCACGCCGCTaGACTGGTCTTTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: KTHMPPASPQPGTQLFVTQRPRR*TGLCGL
Trigger: AAGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTG...AGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACGCTCTCCTGCAACTCTaGACTACTACTTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDALLQL*TTTWRH
Trigger: ATGCCGCCAAGTAGTAGTTCAGAGTTGCAGGAGAGC...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAAAATTATGGATGGGAGTaGGCCTCACCTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKNYGWE*ASPAST
Trigger: AGTGGAAGCAGGTGAGGCTCACTCCCATCCATAATT...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCCGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFRAGSG*SNEPSA
Trigger: GGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCG...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACCACATCTCTCCAGTCTaGGGTTCTTGCTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDHISPV*GSCYLS
Trigger: GCTGAGGTAGCAAGAACCGCAGACTGGAGAGATGTG...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp CTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCAAATGTGCTGAATTATaGATGGGAGTGAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: LEMSQRPRRWTGLCGLGSKCAEL*MGVSLT
Trigger: GGTGAGGCTCACTCCCATCCATAATTCAGCACATTT...GCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAAGTCTTTCCTGGTTGGTaGGCAGTTGTTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKVFPGW*AVVVHF
Trigger: GAAATGGACAACAACTGCTCACCAACCAGGAAAGAC...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTRAGSG*SNEPSA
Trigger: GGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTRAGSG*SNEPSA
Trigger: GGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCTCTTTCCCATCCACATaGGACAGACTTACGGCATTC +
Preference number: 4 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPSFPST*DRLTAF
Trigger: GAATGCCGTAAGTCTGTCCCATGTGGATGGGAAAGA...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp CAAACCACTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTCTTTGGTTTTGTAGATaGGATGTCAGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: QTTGDESEATPLDWSLWTLWFCR*DVRAAM
Trigger: CATGGCAGCCCTGACATCCCATCTACAAAACCAAAG...AGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAGTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCTGGTCTTTGTGGACTTaGGAGCGCCTACTGATCAAA +
Preference number: 4 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPWSLWT*ERLLIK
Trigger: TTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCA...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAAAGAGACCAAATGTGCTaGATTATGGATGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKRDQMC*IMDGSE
Trigger: CTCACTCCCATCCATAATTCAGCACATTTGGTCTCT...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACGTAGTGGTGTACTTTTaGCAGGAGGAAAACCACGTC +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDVVVYF*QEENHV
Trigger: GACGTGGTTTTCCTCCTGTCAAAAGTACACCACTAC...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCSPAQS*PSSRVR
Trigger: CCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCTCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFSPAQS*PSSRVR
Trigger: CCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGA...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp CCCAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGTCAGGGCTGCCATGCTaGAGTCTTTATATCTTGACT +
Preference number: 4 (lower is better)
Translates to: PKTHMPPASPQPGTQLFVSGLPC*SLYILT
Trigger: AGTCAAGATATAAAGACTGCAGCATGGCAGCCCTGA...CACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCGCTCGCGCTCTGGTTaGGCTGGCGCCTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTRSRSG*AGALGA
Trigger: AGCCCCTAAGGCGCCAGCGCAACCAGAGCGCGAGCG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR CCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACAAAGGCTTTACGTCGTaGGGGGCTAAGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDKGFTS*GAKSFF
Trigger: AAAGAAGCTCTTAGCCCCCCACGACGTAAAGCCTTT...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAAATATTTTCTCACCAGTaGAGTCTTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKIFSHQ*SLSWLV
Trigger: CACCAACCAGGAAAGACTTCACTGGTGAGAAAATAT...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACAACGAGATTAAAAGGTaGCCGAGGAGGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDNEIKR*PRRCPF
Trigger: AAATGGACACCTCCTCGGTCACCTTTTAATCTCGTT...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp GCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAATCTTGCTACCTCAGCTaGAGGATACTTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AAGLVFVDLGAPTDQKPQSCYLS*RILLQK
Trigger: TTTCTGGAGAAGTATCCTTCAGCTGAGGTAGCAAGA...TTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTACGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLRAGSG*SNEPSA
Trigger: GGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCG...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTSPAQS*PSSRVR
Trigger: CCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp ATAGGGAATGACAGGAACAGGGCCAGAGGTGACAAACCACTGGAGATGAGTCAGGGAGTGAGCCTCACCTaGTTCCACTCATTGACACAA +
Preference number: 4 (lower is better)
Translates to: IGNDRNRARGDKPLEMSQGVSLT*FHSLTQ
Trigger: TTGTGTCAATGAGTGGAAGCAGGTGAGGCTCACTCC...CTGACTCATCTCCAGTGGTTTGTCACCTCTGGCCCTGTTCCTGTCATTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCAATCGCTCGCGCTCTaGTTGCGCTGGCGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCQSLAL*LRWRLR
Trigger: CCTAAGGCGCCAGCGCAACCAGAGCGCGAGCGATTG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR TCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGCTGCAACCGAGGTCTaGATGTTGCGAAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCAATEV*MLRKRP
Trigger: GGGGCGCTTTCGCAACATTCAGACCTCGGTTGCAGC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000503197.5
CDS-3UTR TCA 90 bp CAAACCACTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTCTTTTGCTATCACTTTaGACAAAACCTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: QTTGDESEATPLDWSLWTLLLSL*TKPEQL
Trigger: GAGCTGTTCAGGTTTTGTTCAAAGTGATAGCAAAAG...AGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAGTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKSPAQS*PSSRVR
Trigger: CCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CCCAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGTTCGGTAAGAGTCGTTaGCATATTTACCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: PKTHMPPASPQPGTQLFVFGKSR*HIYQSH
Trigger: ATGGGATTGGTAAATATGGCAACGACTCTTACCGAA...CACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp ATAGGGAATGACAGGAACAGGGCCAGAGGTGACAAACCACTGGAGATGAGTCAGACTGAGCAGAAGCGATaGGTTCTTGTAGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: IGNDRNRARGDKPLEMSQTEQKR*VLVARD
Trigger: ATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGT...CTGACTCATCTCCAGTGGTTTGTCACCTCTGGCCCTGTTCCTGTCATTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp GCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAAGAACTTCAGTCCTTGTaGGCTGATAAAGTACACATC +
Preference number: 4 (lower is better)
Translates to: AAGLVFVDLGAPTDQKPQELQSL*ADKVHI
Trigger: GATGTGTACTTTATCAGCCCACAAGGACTGAAGTTC...TTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGCGCTCTGGTTGCGCTaGCGCCTTAGGGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKALWLR*RLRGSS
Trigger: ACTGGAGCCCCTAAGGCGCCAGCGCAACCAGAGCGC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR TCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACGGGATGGTATCTTCTTaGAATATTTTCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDGMVSS*NIFSPV
Trigger: CACTGGTGAGAAAATATTTCAAGAAGATACCATCCC...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCCTCCTGGGCCCTCATaGGCTCAAATGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGPPGPS*AQMILL
Trigger: CAGGAGGATCATTTGAGCTCATGAGGGCCCAGGAGG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCCTCCTGGGCCCTCATaGGCTCAAATGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCPPGPS*AQMILL
Trigger: CAGGAGGATCATTTGAGCTCATGAGGGCCCAGGAGG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCCGAGGTCTGAATGTTaGGAAAGCGCCCCAGACGCC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTPRSEC*ESAPDA
Trigger: GGCGTCTGGGGCGCTTTCGCAACATTCAGACCTCGG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000503197.5
CDS-3UTR GCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACCGAGGTCTGAATGTTaGGAAAGCGCCCCAGACGCC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTPRSEC*ESAPDA
Trigger: GGCGTCTGGGGCGCTTTCGCAACATTCAGACCTCGG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000503197.5
CDS-3UTR GCA 90 bp ATAGGGAATGACAGGAACAGGGCCAGAGGTGACAAACCACTGGAGATGAGTCAGATGTCAGGGCTGCCATaGTGCAGTCTTTATATCTTG +
Preference number: 4 (lower is better)
Translates to: IGNDRNRARGDKPLEMSQMSGLP*CSLYIL
Trigger: CAAGATATAAAGACTGCAGCATGGCAGCCCTGACAT...CTGACTCATCTCCAGTGGTTTGTCACCTCTGGCCCTGTTCCTGTCATTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp CCCAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGATTGGATACTTCCACTaGTTTGTCAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: PKTHMPPASPQPGTQLFVIGYFH*FVRYSS
Trigger: AGATGAATACCTGACAAAGCAGTGGAAGTATCCAAT...CACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGATPRV*GGVRCE
Trigger: TTCACATCTTACTCCGCCCCACACCCTGGGCGTTGC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFATPRV*GGVRCE
Trigger: TTCACATCTTACTCCGCCCCACACCCTGGGCGTTGC...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp CAAACCACTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTTTCTATCTGTGTTCGTaGGATGGTATCTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QTTGDESEATPLDWSLWTFYLCS*DGIFLK
Trigger: TTTCAAGAAGATACCATCCCACGAACACAGATAGAA...AGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAGTGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CCA 90 bp AAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTCCCATGAAGCTCAATTaGATACTTCCACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KTHMPPASPQPGTQLFVTPMKLN*ILPLLC
Trigger: ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGG...AGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGGGCGGAGTAAGATGTaGAACCTCTTCAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGGRSKM*NLFSSR
Trigger: CCGTGAGCTGAAGAGGTTTCACATCTTACTCCGCCC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp ATAGGGAATGACAGGAACAGGGCCAGAGGTGACAAACCACTGGAGATGAGTCAGACTTTGAACAAAACCTaGACAGCTCTTCCTACATCC +
Preference number: 4 (lower is better)
Translates to: IGNDRNRARGDKPLEMSQTLNKT*TALPTS
Trigger: GGATGTAGGAAGAGCTGTTCAGGTTTTGTTCAAAGT...CTGACTCATCTCCAGTGGTTTGTCACCTCTGGCCCTGTTCCTGTCATTCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACTCACGGCACCGGGCTaGAACCGAGGTCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTLTAPG*NRGLNV
Trigger: AACATTCAGACCTCGGTTGCAGCCCGGTGCCGTGAG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCCAGGTATTGCCATTTTaGCGGAGGTCATTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFQVLPF*RRSFGG
Trigger: CCCGCCGAATGACCTCCGGCAAAATGGCAATACCTG...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTATPRV*GGVRCE
Trigger: TTCACATCTTACTCCGCCCCACACCCTGGGCGTTGC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp GCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAAGATGAGAAGCTTCCATaGATCATGAAAAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: AAGLVFVDLGAPTDQKPQDEKLP*IMKKCF
Trigger: GAAACACTTTTTCATGATCCATGGAAGCTTCTCATC...TTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGAVAPN*AEAMGS
Trigger: AGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATCCAAGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: FPAARNTIVCDCNSICIQAVAPN*AEAMGS
Trigger: AGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGC...TTGGATACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGCTCTCCTGCAACTCTaGACTACTACTTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCALLQL*TTTWRH
Trigger: ATGCCGCCAAGTAGTAGTTCAGAGTTGCAGGAGAGC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATCCAACACACAAATAGGGAATaGCAGGAACAGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FPAARNTIVCDCNSICIQHTNRE*QEQGQR
Trigger: CCTCTGGCCCTGTTCCTGTCATTCCCTATTTGTGTG...TTGGATACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCTCACGGCACCGGGCTaGAACCGAGGTCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKLTAPG*NRGLNV
Trigger: AACATTCAGACCTCGGTTGCAGCCCGGTGCCGTGAG...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000503197.5
CDS-3UTR GCA 90 bp TGGTGTACTTTTGACAGGAGGAAAACCACGTCAGGCTTAGAGATAGCACACAAAGAGGGTCTCACCACATaGTCCAGCATCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: WCTFDRRKTTSGLEIAHKEGLTT*SSIRNA
Trigger: TGCATTTCTGATGCTGGAGCATGTGGTGAGACCCTC...TTTGTGTGCTATCTCTAAGCCTGACGTGGTTTTCCTCCTGTCAAAAGTACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCACATCTCTCCAGTCTaGGGTTCTTGCTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGHISPV*GSCYLS
Trigger: GCTGAGGTAGCAAGAACCGCAGACTGGAGAGATGTG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCACATCTCTCCAGTCTaGGGTTCTTGCTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCHISPV*GSCYLS
Trigger: GCTGAGGTAGCAAGAACCGCAGACTGGAGAGATGTG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCCACATCTCTCCAGTCTaGGGTTCTTGCTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFHISPV*GSCYLS
Trigger: GCTGAGGTAGCAAGAACCGCAGACTGGAGAGATGTG...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKATPRV*GGVRCE
Trigger: TTCACATCTTACTCCGCCCCACACCCTGGGCGTTGC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACAAAATCAAAATCTTCTaGCTTAAGAGAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QNPHATRFPAARNTIVCDKIKIF*LKRSLS
Trigger: GGAGAGACTTCTCTTAAGCCAGAAGATTTTGATTTT...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGGGCGGAGTAAGATGTaGAACCTCTTCAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKGRSKM*NLFSSR
Trigger: CCGTGAGCTGAAGAGGTTTCACATCTTACTCCGCCC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTAVAPN*AEAMGS
Trigger: AGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp ATAGGGAATGACAGGAACAGGGCCAGAGGTGACAAACCACTGGAGATGAGTCAGGCAGTCTTTATATCTTaGCTTGATACCCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: IGNDRNRARGDKPLEMSQAVFIS*LDTPFR
Trigger: TCTAAAAGGGGTATCAAGTCAAGATATAAAGACTGC...CTGACTCATCTCCAGTGGTTTGTCACCTCTGGCCCTGTTCCTGTCATTCCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAGCTCTCCTGCAACTCTaGACTACTACTTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTALLQL*TTTWRH
Trigger: ATGCCGCCAAGTAGTAGTTCAGAGTTGCAGGAGAGC...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACCTCATGAGCTCAAATaGTCCTCCTGCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTPHELK*SSCLSL
Trigger: AAGGCTGAGGCAGGAGGATCATTTGAGCTCATGAGG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCCTCATGAGCTCAAATaGTCCTCCTGCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTPHELK*SSCLSL
Trigger: AAGGCTGAGGCAGGAGGATCATTTGAGCTCATGAGG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp AAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTTTCACTTTCAGCATCTaGTTTATTACACACAGATTC +
Preference number: 4 (lower is better)
Translates to: KTHMPPASPQPGTQLFVTFTFSI*FITHRF
Trigger: GAATCTGTGTGTAATAAAGCAGATGCTGAAAGTGAA...AGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGAGGGTCTCACCACATaGTCCAGCATCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCEGLTT*SSIRNA
Trigger: TGCATTTCTGATGCTGGAGCATGTGGTGAGACCCTC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTTGTGGTCTTCAGGGTaGACCTGCTTCCACTCATTG +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCLWSSG*TCFHSL
Trigger: CAATGAGTGGAAGCAGGTGCACCCTGAAGACCACAA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCTTGTGGTCTTCAGGGTaGACCTGCTTCCACTCATTG +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFLWSSG*TCFHSL
Trigger: CAATGAGTGGAAGCAGGTGCACCCTGAAGACCACAA...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTCATCCAGACTGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGSSRLE*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCAGTCTGGATGA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGGGCGGAGTAAGATGTaGAACCTCTTCAGCTCACGG +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLGRSKM*NLFSSR
Trigger: CCGTGAGCTGAAGAGGTTTCACATCTTACTCCGCCC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKAVAPN*AEAMGS
Trigger: AGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGCTCTCCTGCAACTCTaGACTACTACTTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKALLQL*TTTWRH
Trigger: ATGCCGCCAAGTAGTAGTTCAGAGTTGCAGGAGAGC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGTCTTTCCTGGTTGGTaGGCAGTTGTTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGVFPGW*AVVVHF
Trigger: GAAATGGACAACAACTGCTCACCAACCAGGAAAGAC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGGTGCACCAATCCCATaGAGCTCAATTGGATACTTC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGGAPIP*SSIGYF
Trigger: GAAGTATCCAATTGAGCTTCATGGGATTGGTGCACC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGAGGGTCTCACCACATaGTCCAGCATCAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTEGLTT*SSIRNA
Trigger: TGCATTTCTGATGCTGGAGCATGTGGTGAGACCCTC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACATCTCTCCAGTCTaGGGTTCTTGCTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKHISPV*GSCYLS
Trigger: GCTGAGGTAGCAAGAACCGCAGACTGGAGAGATGTG...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTCTTCAGGGTGCACCTaGTTCCACTCATTGACACAA +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCSSGCT*FHSLTQ
Trigger: TTGTGTCAATGAGTGGAAGCAGGTGCACCCTGAAGA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATTGTGGTCTTCAGGGTaGACCTGCTTCCACTCATTG +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTLWSSG*TCFHSL
Trigger: CAATGAGTGGAAGCAGGTGCACCCTGAAGACCACAA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTGCCACCATTGCTTTTaGTGCTTTTCTGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCCHHCF*CFSGFP
Trigger: GGGAAAGCCAGAAAAGCAGCAAAAGCAATGGTGGCA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCCCAAAGCACAGGTATTaGCATTTTGCCGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFPKHRY*HFAGGH
Trigger: ATGACCTCCGGCAAAATGGCAATACCTGTGCTTTGG...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGAGCAGAAGCGATaGGTTCTTGTAGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCTEQKR*VLVARD
Trigger: ATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGT...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTCTTTCCCATCCACATaGGACAGACTTACGGCATTC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGSFPST*DRLTAF
Trigger: GAATGCCGTAAGTCTGTCCCATGTGGATGGGAAAGA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCTTTGGTTTTGTAGATaGGATGTCAGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGLWFCR*DVRAAM
Trigger: CATGGCAGCCCTGACATCCCATCTACAAAACCAAAG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTAAAGGCTTTACGTCGTaGGGGGCTAAGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCKGFTS*GAKSFF
Trigger: AAAGAAGCTCTTAGCCCCCCACGACGTAAAGCCTTT...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTAAAGGCTTTACGTCGTaGGGGGCTAAGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGKGFTS*GAKSFF
Trigger: AAAGAAGCTCTTAGCCCCCCACGACGTAAAGCCTTT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAGTCTTTCCTGGTTGGTaGGCAGTTGTTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTVFPGW*AVVVHF
Trigger: GAAATGGACAACAACTGCTCACCAACCAGGAAAGAC...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTCTTGCTACCTCAGCTaGAGGATACTTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGSCYLS*RILLQK
Trigger: TTTCTGGAGAAGTATCCTTCAGCTGAGGTAGCAAGA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCTCTTGCTACCTCAGCTaGAGGATACTTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFSCYLS*RILLQK
Trigger: TTTCTGGAGAAGTATCCTTCAGCTGAGGTAGCAAGA...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR TCA 90 bp CCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATGTCAGGTATTCATCTaGGAACTTGACAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: PASPQPGTQLFVTVIAFVCQVFI*ELDNGF
Trigger: AAAACCATTGTCAAGTTCTCAGATGAATACCTGACA...TACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTACCTCATGAGCTCAAATaGTCCTCCTGCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLPHELK*SSCLSL
Trigger: AAGGCTGAGGCAGGAGGATCATTTGAGCTCATGAGG...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGGATGGTATCTTCAGTaGAGTCTTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTGWYLQ*SLSWLV
Trigger: CACCAACCAGGAAAGACTTCACTGAAGATACCATCC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429544.7
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTCAGGGCTGCCATGCTaGAGTCTTTATATCTTGACT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGSGLPC*SLYILT
Trigger: AGTCAAGATATAAAGACTGCAGCATGGCAGCCCTGA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTATGTCAGGGCTGCCATaGTGCAGTCTTTATATCTTG +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCMSGLP*CSLYIL
Trigger: CAAGATATAAAGACTGCAGCATGGCAGCCCTGACAT...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTATGTCAGGGCTGCCATaGTGCAGTCTTTATATCTTG +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGMSGLP*CSLYIL
Trigger: CAAGATATAAAGACTGCAGCATGGCAGCCCTGACAT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGLDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCLDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp TTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATCCAACTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: FPAARNTIVCDCNSICIQLDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...TTGGATACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATCTTCAGGGTGCACCTaGTTCCACTCATTGACACAA +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTSSGCT*FHSLTQ
Trigger: TTGTGTCAATGAGTGGAAGCAGGTGCACCCTGAAGA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTTCTTCAGGGTGCACCTaGTTCCACTCATTGACACAA +
Preference number: 4 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCSSGCT*FHSLTQ
Trigger: TTGTGTCAATGAGTGGAAGCAGGTGCACCCTGAAGA...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTTGTGGTCTTCAGGGTaGACCTGCTTCCACTCATTG +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKLWSSG*TCFHSL
Trigger: CAATGAGTGGAAGCAGGTGCACCCTGAAGACCACAA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTTGTGGTCTTCAGGGTaGACCAATCCCATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKLWSSG*TNPMKL
Trigger: GAGCTTCATGGGATTGGTGCACCCTGAAGACCACAA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTCTTTCCCATCCACATaGGACAGACTTACGGCATTC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTSFPST*DRLTAF
Trigger: GAATGCCGTAAGTCTGTCCCATGTGGATGGGAAAGA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACTTTGGTTTTGTAGATaGGATGTCAGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTLWFCR*DVRAAM
Trigger: CATGGCAGCCCTGACATCCCATCTACAAAACCAAAG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCTTTGGTTTTGTAGATaGGATGTCAGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTLWFCR*DVRAAM
Trigger: CATGGCAGCCCTGACATCCCATCTACAAAACCAAAG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAAAAGGCTTTACGTCGTaGGGGGCTAAGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTKGFTS*GAKSFF
Trigger: AAAGAAGCTCTTAGCCCCCCACGACGTAAAGCCTTT...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACGTGGGATGGTATCTTaGCATTCTGTTCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTRGMVS*HSVPAV
Trigger: TACTGCAGGAACAGAATGCCAAGATACCATCCCACG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAAACGAGATTAAAAGGTaGCCGAGGAGGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTNEIKR*PRRCPF
Trigger: AAATGGACACCTCCTCGGTCACCTTTTAATCTCGTT...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTAACGAGATTAAAAGGTaGCCGAGGAGGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTNEIKR*PRRCPF
Trigger: AAATGGACACCTCCTCGGTCACCTTTTAATCTCGTT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTCTTGCTACCTCAGCTaGAGGATACTTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTSCYLS*RILLQK
Trigger: TTTCTGGAGAAGTATCCTTCAGCTGAGGTAGCAAGA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATCTTGCTACCTCAGCTaGAGGATACTTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTSCYLS*RILLQK
Trigger: TTTCTGGAGAAGTATCCTTCAGCTGAGGTAGCAAGA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTCAGGGCTGCCATGCTaGAGTCTTTATATCTTGACT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTSGLPC*SLYILT
Trigger: AGTCAAGATATAAAGACTGCAGCATGGCAGCCCTGA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCTCCAGCATCAGAAATaGAGACAGTTCTATCAAGCT +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCLQHQK*RQFYQA
Trigger: AGCTTGATAGAACTGTCTGCATTTCTGATGCTGGAG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCTCCAGCATCAGAAATaGAGACAGTTCTATCAAGCT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGLQHQK*RQFYQA
Trigger: AGCTTGATAGAACTGTCTGCATTTCTGATGCTGGAG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp TTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATCCAACTCCAGCATCAGAAATaGAGACAGTTCTATCAAGCT +
Preference number: 4 (lower is better)
Translates to: FPAARNTIVCDCNSICIQLQHQK*RQFYQA
Trigger: AGCTTGATAGAACTGTCTGCATTTCTGATGCTGGAG...TTGGATACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTLDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATCATCCAGACTGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLSSRLE*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCAGTCTGGATGA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCACCATTGCTTTTGCTaGTTTTCTGGCTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGHHCFC*FSGFPF
Trigger: AAAGGGAAAGCCAGAAAAGCAGCAAAAGCAATGGTG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGAACTTCAGTCCTTGTaGGCTGATAAAGTACACATC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCELQSL*ADKVHI
Trigger: GATGTGTACTTTATCAGCCCACAAGGACTGAAGTTC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGAACTTCAGTCCTTGTaGGCTGATAAAGTACACATC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGELQSL*ADKVHI
Trigger: GATGTGTACTTTATCAGCCCACAAGGACTGAAGTTC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCCCATGAAGCTCAATTaGATACTTCCACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCPMKLN*ILPLLC
Trigger: ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCCCATGAAGCTCAATTaGATACTTCCACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGPMKLN*ILPLLC
Trigger: ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCCCCATGAAGCTCAATTaGATACTTCCACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFPMKLN*ILPLLC
Trigger: ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGG...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATCTGTGTTCGTGGGATaGTATCTTGGCATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTSVFVG*YLGILF
Trigger: GAACAGAATGCCAAGATACCATCCCACGAACACAGA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393278.6
3UTR CAA 72 bp AGTCGTTGCCATATTTACCAATCCCATGAAGCTCAATaGGATACTTCCACTGCTTTGTCAGGTATTCATCTG +
Preference number: 4 (lower is better)
Translates to: SRCHIYQSHEAQ*DTSTALSGIHL
Trigger: CAGATGAATACCTGACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAACGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAACTTTGAACAAAACCTaGACAGCTCTTCCTACATCC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTTLNKT*TALPTS
Trigger: GGATGTAGGAAGAGCTGTTCAGGTTTTGTTCAAAGT...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGTCTTTCCTGGTTGGTaGGCAGTTGTTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLVFPGW*AVVVHF
Trigger: GAAATGGACAACAACTGCTCACCAACCAGGAAAGAC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTATATTTTCTCACCAGTaGAGTCTTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTIFSHQ*SLSWLV
Trigger: CACCAACCAGGAAAGACTTCACTGGTGAGAAAATAT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR TCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKLDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AATTCGGTAAGAGTCGTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTGACAATGGTTTTTaGCCGAAGATCGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: NSVRVVAIFTNPMKLNWILDNGF*PKIVET
Trigger: GGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG...TATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAACGACTCTTACCGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTTCGGTAAGAGTCGTTaGCATATTTACCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCFGKSR*HIYQSH
Trigger: ATGGGATTGGTAAATATGGCAACGACTCTTACCGAA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCTTCGGTAAGAGTCGTTaGCATATTTACCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFFGKSR*HIYQSH
Trigger: ATGGGATTGGTAAATATGGCAACGACTCTTACCGAA...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAACTGAGCAGAAGCGATaGGTTCTTGTAGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLTEQKR*VLVARD
Trigger: ATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACCCATGAAGCTCAATTaGATACTTCCACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTPMKLN*ILPLLC
Trigger: ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGCAGTCTTTATATCTTaGCTTGATACCCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCAVFIS*LDTPFR
Trigger: TCTAAAAGGGGTATCAAGTCAAGATATAAAGACTGC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTCTTTTGCTATCACTTTaGACAAAACCTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTLLLSL*TKPEQL
Trigger: GAGCTGTTCAGGTTTTGTTCAAAGTGATAGCAAAAG...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACTTTTGCTATCACTTTaGACAAAACCTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTLLLSL*TKPEQL
Trigger: GAGCTGTTCAGGTTTTGTTCAAAGTGATAGCAAAAG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGATATTTTCTCACCAGTaGAGTCTTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKIFSHQ*SLSWLV
Trigger: CACCAACCAGGAAAGACTTCACTGGTGAGAAAATAT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAACGAGATTAAAAGGTaGCCGAGGAGGTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLNEIKR*PRRCPF
Trigger: AAATGGACACCTCCTCGGTCACCTTTTAATCTCGTT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTATTTACCAATCCCATaGAGCTCAATTGGATACTTC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCYLPIP*SSIGYF
Trigger: GAAGTATCCAATTGAGCTTCATGGGATTGGTAAATA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp TTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATCCAATATTTACCAATCCCATaGAGCTCAATTGGATACTTC +
Preference number: 4 (lower is better)
Translates to: FPAARNTIVCDCNSICIQYLPIP*SSIGYF
Trigger: GAAGTATCCAATTGAGCTTCATGGGATTGGTAAATA...TTGGATACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTATTGGATACTTCCACTaGTTTGTCAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGIGYFH*FVRYSS
Trigger: AGATGAATACCTGACAAAGCAGTGGAAGTATCCAAT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTGACAATGGTTTTTGCCCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCATTGGATACTTCCACTaGTTTGTCAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: LDNGFCPKIVETKRFKKFIGYFH*FVRYSS
Trigger: AGATGAATACCTGACAAAGCAGTGGAAGTATCCAAT...GAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGGGCAAAAACCATTGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTTCGGTAAGAGTCGTTaGCATATTTACCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTFGKSR*HIYQSH
Trigger: ATGGGATTGGTAAATATGGCAACGACTCTTACCGAA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTTCTATCTGTGTTCGTaGGATGGTATCTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCFYLCS*DGIFLK
Trigger: TTTCAAGAAGATACCATCCCACGAACACAGATAGAA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGATGAGAAGCTTCCATaGATCATGAAAAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCDEKLP*IMKKCF
Trigger: GAAACACTTTTTCATGATCCATGGAAGCTTCTCATC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTTCTATCTGTGTTCGTaGGATGGTATCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKFYLCS*DGILAF
Trigger: GAATGCCAAGATACCATCCCACGAACACAGATAGAA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGCAGTCTTTATATCTTaGCTTGATACCCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTAVFIS*LDTPFR
Trigger: TCTAAAAGGGGTATCAAGTCAAGATATAAAGACTGC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAACTTTGAACAAAACCTaGACAGCTCTTCCTACATCC +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLTLNKT*TALPTS
Trigger: GGATGTAGGAAGAGCTGTTCAGGTTTTGTTCAAAGT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGGGATGGTATCTTCTTaGAATATTTTCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKGMVSS*NIFSPV
Trigger: CACTGGTGAGAAAATATTTCAAGAAGATACCATCCC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTGTCAGGTATTCATCTaGGAACTTGACAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTCQVFI*ELDNGF
Trigger: AAAACCATTGTCAAGTTCTCAGATGAATACCTGACA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTTGTCAGGTATTCATCTaGGAACTTGACAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCCQVFI*ELDNGF
Trigger: AAAACCATTGTCAAGTTCTCAGATGAATACCTGACA...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR TCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTATTTACCAATCCCATaGAGCTCAATTGGATACTTC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTYLPIP*SSIGYF
Trigger: GAAGTATCCAATTGAGCTTCATGGGATTGGTAAATA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATATTTACCAATCCCATaGAGCTCAATTGGATACTTC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTYLPIP*SSIGYF
Trigger: GAAGTATCCAATTGAGCTTCATGGGATTGGTAAATA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR TCA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTTATTTACCAATCCCATaGAGCTCAATTGGATACTTC +
Preference number: 4 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCYLPIP*SSIGYF
Trigger: GAAGTATCCAATTGAGCTTCATGGGATTGGTAAATA...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR GCA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTTCACTTTCAGCATCTaGTTTATTACACACAGATTC +
Preference number: 4 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGFTFSI*FITHRF
Trigger: GAATCTGTGTGTAATAAAGCAGATGCTGAAAGTGAA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTTCACTTTCAGCATCTaGTTTATTACACACAGATTC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCFTFSI*FITHRF
Trigger: GAATCTGTGTGTAATAAAGCAGATGCTGAAAGTGAA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTATTGGATACTTCCACTaGTTTGTCAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTIGYFH*FVRYSS
Trigger: AGATGAATACCTGACAAAGCAGTGGAAGTATCCAAT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTTCGGTAAGAGTCGTTaGCATATTTACCAATCCCAT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKFGKSR*HIYQSH
Trigger: ATGGGATTGGTAAATATGGCAACGACTCTTACCGAA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR CCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGAACTTCAGTCCTTGTaGGCTGATAAAGTACACATC +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLELQSL*ADKVHI
Trigger: GATGTGTACTTTATCAGCCCACAAGGACTGAAGTTC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTAAAATCAAAATCTTCTaGCTTAAGAGAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCKIKIF*LKRSLS
Trigger: GGAGAGACTTCTCTTAAGCCAGAAGATTTTGATTTT...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTTCTATCTGTGTTCGTaGGATGGTATCTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTFYLCS*DGIFLK
Trigger: TTTCAAGAAGATACCATCCCACGAACACAGATAGAA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTGATGAGAAGCTTCCATaGATCATGAAAAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTDEKLP*IMKKCF
Trigger: GAAACACTTTTTCATGATCCATGGAAGCTTCTCATC...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAGATGAGAAGCTTCCATaGATCATGAAAAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTDEKLP*IMKKCF
Trigger: GAAACACTTTTTCATGATCCATGGAAGCTTCTCATC...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTATTTATTTAATTTGTaGTCTTCAGGGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTYLFNL*SSGCTC
Trigger: GCAGGTGCACCCTGAAGACCACAAATTAAATAAATA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS-3UTR CCA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTTATTTATTTAATTTGTaGTCTTCAGGGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCYLFNL*SSGCTC
Trigger: GCAGGTGCACCCTGAAGACCACAAATTAAATAAATA...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTTCTATCTGTGTTCGTaGGATGGTATCTTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKFYLCS*DGIFSE
Trigger: TTCACTGAAGATACCATCCCACGAACACAGATAGAA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429544.7
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTACTTTTGCTATCACTTTaGACAAAACCTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLLLLSL*TKPEQL
Trigger: GAGCTGTTCAGGTTTTGTTCAAAGTGATAGCAAAAG...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGGGATGGTATCTTCTTaGAATATTTTCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLGMVSS*NIFSPV
Trigger: CACTGGTGAGAAAATATTTCAAGAAGATACCATCCC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAATTCATCTGAGAACTTaGCAATGGTTTTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLIHLRT*QWFLPE
Trigger: TTCGGGCAAAAACCATTGTCAAGTTCTCAGATGAAT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTGTCAGGTATTCATCTaGGAACTTGACAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKCQVFI*ELDNGF
Trigger: AAAACCATTGTCAAGTTCTCAGATGAATACCTGACA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATTCACTTTCAGCATCTaGTTTATTACACACAGATTC +
Preference number: 4 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTFTFSI*FITHRF
Trigger: GAATCTGTGTGTAATAAAGCAGATGCTGAAAGTGAA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGATTGGATACTTCCACTaGTTTGTCAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKIGYFH*FVRYSS
Trigger: AGATGAATACCTGACAAAGCAGTGGAAGTATCCAAT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTAAAATCAAAATCTTCTaGCTTAAGAGAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTKIKIF*LKRSLS
Trigger: GGAGAGACTTCTCTTAAGCCAGAAGATTTTGATTTT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGCAGTCTTTATATCTTaGCTTGATACCCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLAVFIS*LDTPFR
Trigger: TCTAAAAGGGGTATCAAGTCAAGATATAAAGACTGC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR TCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATGTCAGGTATTCATCTaGGAACTTGACAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLCQVFI*ELDNGF
Trigger: AAAACCATTGTCAAGTTCTCAGATGAATACCTGACA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR GCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAATTGGATACTTCCACTaGTTTGTCAGGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLIGYFH*FVRYSS
Trigger: AGATGAATACCTGACAAAGCAGTGGAAGTATCCAAT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGAAAATCAAAATCTTCTaGCTTAAGAGAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKKIKIF*LKRSLS
Trigger: GGAGAGACTTCTCTTAAGCCAGAAGATTTTGATTTT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CCA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATATTTATTTAATTTGTaGTCTTCAGGGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLYLFNL*SSGCTC
Trigger: GCAGGTGCACCCTGAAGACCACAAATTAAATAAATA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS GCA 90 bp GGGCAGCTCCGCGGTCCCCCAGACTCAGACTCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGGCTGCAGCAACGAGCCCAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GQLRGPPDSDSPAQS*PSSRVRLQQRAQRR
Trigger: GCGGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGAGTCTGAGTCTGGGGGACCGCGGAGCTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
ENST00000509828.1
CDS GCA 90 bp ACTCAGACTCTCCAGCCCAGTCGTGCCCATCGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCCGCAACGCCCAGGGTGTGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: TQTLQPSRAHRAGSG*SNEPSAATPRVWGG
Trigger: TCCGCCCCACACCCTGGGCGTTGCGGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGAGTCTGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
ENST00000509828.1
CDS CCA 90 bp GGGTCCGGCTGCAGCAACGAGCCCAGCGCCGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAAACCTCTTCAGCTCACGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: GSGCSNEPSAATPRV*GGVRCETSSAHGTG
Trigger: CCCGGTGCCGTGAGCTGAAGAGGTTTCACATCTTACTCCGCCCCACACCCTGGGCGTTGCGGCGCTGGGCTCGTTGCTGCAGCCGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
CDS-3UTR CAA 90 bp CTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCATAAACACATCCTTTTaGCACTTGCTTCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LEMSQRPRRWTGLCGLGSINTSF*HLLRVL
Trigger: CAGGACCCGAAGCAAGTGCAAAAAGGATGTGTTTAT...GCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCTGGTTGGTGAGCAGTaGTTGTCCATTTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPLVGEQ*LSISEP
Trigger: TGGCTCTGAAATGGACAACAACTGCTCACCAACCAG...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTCGCTCGCGCTCTGGTaGCGCTGGCGCCTTAGGGGC +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGSLALW*RWRLRG
Trigger: GCCCCTAAGGCGCCAGCGCAACCAGAGCGCGAGCGA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR CAA 90 bp CTGGAGATGAGTCAGAGGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCTGTAGTGGTGTACTTTaGACAGGAGGAAAACCACGT +
Preference number: 5 (lower is better)
Translates to: LEMSQRPRRWTGLCGLGSCSGVL*TGGKPR
Trigger: ACGTGGTTTTCCTCCTGTCAAAAGTACACCACTACA...GCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCCTCTGACTCATCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAAACTGGTCTTTGTGGACTaGGGAGCGCCTACTGATCAA +
Preference number: 5 (lower is better)
Translates to: PLDWSLWTWERLLIKNPKLVFVD*GAPTDQ
Trigger: TTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAG...TTTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS GCA 90 bp AAGGATACTTCTCCAGAAACTTCCAAAGCACAGGTATTGCCATTTTaGCGGAGGTCATTCGGCGGGTCTGGGACTAGGCGCTCACTAGAG +
Preference number: 5 (lower is better)
Translates to: KDTSPETSKAQVLPF*RRSFGGSGTRRSLE
Trigger: CTCTAGTGAGCGCCTAGTCCCAGACCCGCCGAATGACCTCCGGCAAAATGGCAATACCTGTGCTTTGGAAGTTTCTGGAGAAGTATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CAA 90 bp CCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAAAGTTGGTGAGCAGTTGTaGTCCATTTCAGAGCCACGT +
Preference number: 5 (lower is better)
Translates to: PLDWSLWTWERLLIKNPKVGEQL*SISEPR
Trigger: ACGTGGCTCTGAAATGGACAACAACTGCTCACCAAC...TTTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAATTGCCTGAGGTCCGATaGAGAAATATAGTAGCGATG +
Preference number: 5 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKLPEVR*RNIVAM
Trigger: CATCGCTACTATATTTCTCAATCGGACCTCAGGCAA...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCAAATCCAAAGCACAGGTATaGCCATTTTGCCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PLDWSLWTWERLLIKNPKSKAQV*PFCLRS
Trigger: GGACCTCAGGCAAAATGGCAATACCTGTGCTTTGGA...TTTGGGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp GGCCACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAATCCCATGAAGCTCAATaGGATACTTCCACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: GHAAGLVFVDLGAPTDQKSHEAQ*DTSTAL
Trigger: CAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGA...TTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp ATAGGGAATGACAGGAACAGGGCCAGAGGTGACAAACCACTGGAGATGAGTCAGACATCCTTTTTGCACTaGCTTCGGGTCCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: IGNDRNRARGDKPLEMSQTSFLH*LRVLRF
Trigger: GAACCTCAGGACCCGAAGCAAGTGCAAAAAGGATGT...CTGACTCATCTCCAGTGGTTTGTCACCTCTGGCCCTGTTCCTGTCATTCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCGATACTTCCACTGCTTaGTCAGGTATTCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPDTSTA*SGIHLR
Trigger: TCTCAGATGAATACCTGACAAAGCAGTGGAAGTATC...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CCCAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGAATGGTGGACTTATTTaGCCTCAGAGACCAAATGTG +
Preference number: 5 (lower is better)
Translates to: PKTHMPPASPQPGTQLFVNGGLI*PQRPNV
Trigger: CACATTTGGTCTCTGAGGCAAAATAAGTCCACCATT...CACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp TGGTGTACTTTTGACAGGAGGAAAACCACGTCAGGCTTAGAGATAGCACACAAACCGCTGGACTGGTCTTaGTGGACTTGGGAGCGCCTA +
Preference number: 5 (lower is better)
Translates to: WCTFDRRKTTSGLEIAHKPLDWS*WTWERL
Trigger: TAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGG...TTTGTGTGCTATCTCTAAGCCTGACGTGGTTTTCCTCCTGTCAAAAGTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS TCA 90 bp CTTCAGTCCTTGTGGGGGCATTCTGTTCCTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCTTGTAGCAAGGGATTACATTCACTG +
Preference number: 5 (lower is better)
Translates to: LQSLWGHSVPAVAPN*AEAMGSCSKGLHSL
Trigger: CAGTGAATGTAATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGCAGGAACAGAATGCCCCCACAAGGACTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505883.1
CDS-3UTR CAA 90 bp AAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTTCTGAACTTCAGTCCTaGTGGGCTGATAAAGTACAC +
Preference number: 5 (lower is better)
Translates to: KTHMPPASPQPGTQLFVTSELQS*WADKVH
Trigger: GTGTACTTTATCAGCCCACAAGGACTGAAGTTCAGA...AGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CCCAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGTATTCATCTGAGAACTaGACAATGGTTTTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: PKTHMPPASPQPGTQLFVYSSEN*TMVFAR
Trigger: TCGGGCAAAAACCATTGTCAAGTTCTCAGATGAATA...CACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTGGCTCACTGAAGCCTaGACCTCCTGGGCCCTCATG +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCWLTEA*TSWALM
Trigger: CATGAGGGCCCAGGAGGTCAAGGCTTCAGTGAGCCA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS TCA 90 bp CATGGGACAGACTTACGGCATTCTGTTCCTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCTTGTAGCAAGGGATTACATTCACTG +
Preference number: 5 (lower is better)
Translates to: HGTDLRHSVPAVAPN*AEAMGSCSKGLHSL
Trigger: CAGTGAATGTAATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGCAGGAACAGAATGCCGTAAGTCTGTCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
ENST00000509587.1
CDS TCA 90 bp CGTGGGATGGTATCTTGGCATTCTGTTCCTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCTTGTAGCAAGGGATTACATTCACTG +
Preference number: 5 (lower is better)
Translates to: RGMVSWHSVPAVAPN*AEAMGSCSKGLHSL
Trigger: CAGTGAATGTAATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGCAGGAACAGAATGCCAAGATACCATCCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR CAA 90 bp CAAAACCCACATGCCACCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACATCAAGCTGACTTTTTaGTGCAACAGGTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: QNPHATRFPAARNTIVCDIKLTF*CNRFTF
Trigger: GAAAGTGAACCTGTTGCACAAAAAAGTCAGCTTGAT...GTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGGTGGCATGTGGGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCCCACAACTTCTACTTTaGTTCCGATTTCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPPQLLL*FRFLQI
Trigger: AATCTGAAGAAATCGGAACAAAAGTAGAAGTTGTGG...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp CACGCCGCTGGACTGGTCTTTGTGGACTTGGGAGCGCCTACTGATCAAAAACCCTGGGATGGTATCTTCTaGAAATATTTTCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: HAAGLVFVDLGAPTDQKPWDGIF*KYFLTS
Trigger: ACTGGTGAGAAAATATTTCAAGAAGATACCATCCCA...GGGTTTTTGATCAGTAGGCGCTCCCAAGTCCACAAAGACCAGTCCAGCGGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATGGCTCACTGAAGCCTaGACCTCCTGGGCCCTCATG +
Preference number: 5 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTWLTEA*TSWALM
Trigger: CATGAGGGCCCAGGAGGTCAAGGCTTCAGTGAGCCA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS CCA 90 bp TTGCACTTGCTTCGGGTCCTGAGGTTCCAGTTTGAATTGTTACTTTaGTTTTGTAGATGGGATGTCAGGGCTGCCATGCTGCAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LHLLRVLRFQFELLL*FCRWDVRAAMLQSL
Trigger: TAAAGACTGCAGCATGGCAGCCCTGACATCCCATCTACAAAACCAAAGTAACAATTCAAACTGGAACCTCAGGACCCGAAGCAAGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATGGCTCACTGAAGCCTaGACCTCCTGGGCCCTCATG +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLWLTEA*TSWALM
Trigger: CATGAGGGCCCAGGAGGTCAAGGCTTCAGTGAGCCA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
CDS GCA 90 bp TACAAGGCTGTTTTCTTCACTGGTCACACTGAGGGTCTCACCACATaGTCCAGCATCAGAAATGCAGACAGTTCTATCAAGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: YKAVFFTGHTEGLTT*SSIRNADSSIKLTF
Trigger: AAAAGTCAGCTTGATAGAACTGTCTGCATTTCTGATGCTGGAGCATGTGGTGAGACCCTCAGTGTGACCAGTGAAGAAAACAGCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
CDS-3UTR CAA 90 bp CCCGCTTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTAATAGTCACCTTTCCTTaGGGCTTTCTAACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PASPQPGTQLFVTVIAFVIVTFP*GFLTFL
Trigger: CAGAAAGGTTAGAAAGCCCAAAGGAAAGGTGACTAT...TACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAAGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGTTGGTGAGCAGTTGTaGTCCATTTCAGAGCCACGT +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCVGEQL*SISEPR
Trigger: ACGTGGCTCTGAAATGGACAACAACTGCTCACCAAC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCTGGTTGGTGAGCAGTaGTTGTCCATTTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGLVGEQ*LSISEP
Trigger: TGGCTCTGAAATGGACAACAACTGCTCACCAACCAG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCTGGTTGGTGAGCAGTaGTTGTCCATTTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCLVGEQ*LSISEP
Trigger: TGGCTCTGAAATGGACAACAACTGCTCACCAACCAG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS TCA 90 bp TTAACCATAATGGTGGACTTATTTTGCCTCAGAGACCAAATGTGCTaGATTATGGATGGGAGTGAGCCTCACCTGCTTCCACTCATTGAC +
Preference number: 5 (lower is better)
Translates to: LTIMVDLFCLRDQMC*IMDGSEPHLLPLID
Trigger: GTCAATGAGTGGAAGCAGGTGAGGCTCACTCCCATCCATAATTCAGCACATTTGGTCTCTGAGGCAAAATAAGTCCACCATTATGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACACTGGTTGGTGAGCAGTaGTTGTCCATTTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTLVGEQ*LSISEP
Trigger: TGGCTCTGAAATGGACAACAACTGCTCACCAACCAG...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TTCCCCGCAGCCAGGAACACAATTGTTTGTGACTGTAATAGCATTTGTATCCAAACAGGTATTGCCATTTaGCCTGAGGTCCGATTGAGA +
Preference number: 5 (lower is better)
Translates to: FPAARNTIVCDCNSICIQTGIAI*PEVRLR
Trigger: TCTCAATCGGACCTCAGGCAAAATGGCAATACCTGT...TTGGATACAAATGCTATTACAGTCACAAACAATTGTGTTCCTGGCTGCGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507208.1
CDS-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATCCAAAGCACAGGTATaGCCATTTTGCCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTSKAQV*PFCLRS
Trigger: GGACCTCAGGCAAAATGGCAATACCTGTGCTTTGGA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTCCAAAGCACAGGTATaGCCATTTTGCCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTSKAQV*PFCLRS
Trigger: GGACCTCAGGCAAAATGGCAATACCTGTGCTTTGGA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAGTGCCACCATTGCTTTaGCTGCTTTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTVPPLL*LLFWLS
Trigger: GGAAAGCCAGAAAAGCAGCAAAAGCAATGGTGGCAC...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGGCTCCAGTGCCACCATaGCTTTTGCTGCTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKAPVPP*LLLLFW
Trigger: CCAGAAAAGCAGCAAAAGCAATGGTGGCACTGGAGC...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS-3UTR CAA 90 bp GTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATACTTCCACTGCTTTGTTCCAAAGCACAGGTATaGCCATTTTGCCGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VAIFTNPMKLNWILPLLCSKAQV*PFCRRS
Trigger: TGACCTCCGGCAAAATGGCAATACCTGTGCTTTGGA...ACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTCTGAACTTCAGTCCTaGTGGGCTGATAAAGTACAC +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCSELQS*WADKVH
Trigger: GTGTACTTTATCAGCCCACAAGGACTGAAGTTCAGA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGACATCCTTTTTGCACTaGCTTCGGGTCCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKTSFLH*LRVLRF
Trigger: GAACCTCAGGACCCGAAGCAAGTGCAAAAAGGATGT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTTGCCTGAGGTCCGATaGAGAAATATAGTAGCGATG +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCLPEVR*RNIVAM
Trigger: CATCGCTACTATATTTCTCAATCGGACCTCAGGCAA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACAACAGGTATTGCCATTTaGCCTGAGGTCCGATTGAGA +
Preference number: 5 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTTGIAI*PEVRLR
Trigger: TCTCAATCGGACCTCAGGCAAAATGGCAATACCTGT...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTACAGGTATTGCCATTTaGCCTGAGGTCCGATTGAGA +
Preference number: 5 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTTGIAI*PEVRLR
Trigger: TCTCAATCGGACCTCAGGCAAAATGGCAATACCTGT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTTCCCATGAAGCTCAATaGGATACTTCCACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCSHEAQ*DTSTAL
Trigger: CAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGA...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAACATCCTTTTTGCACTaGCTTCGGGTCCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLTSFLH*LRVLRF
Trigger: GAACCTCAGGACCCGAAGCAAGTGCAAAAAGGATGT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTATAAACACATCCTTTTaGCACTTGCTTCGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTINTSF*HLLRVL
Trigger: CAGGACCCGAAGCAAGTGCAAAAAGGATGTGTTTAT...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTATAGTCACCTTTCCTTaGGGCTTTCTAACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGIVTFP*GFLTFL
Trigger: CAGAAAGGTTAGAAAGCCCAAAGGAAAGGTGACTAT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGTTGGTGAGCAGTTGTaGTCCATTTCAGAGCCACGT +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLVGEQL*SISEPR
Trigger: ACGTGGCTCTGAAATGGACAACAACTGCTCACCAAC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATCCAAAGCACAGGTATaGCCATTTTGCCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLSKAQV*PFCLRS
Trigger: GGACCTCAGGCAAAATGGCAATACCTGTGCTTTGGA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTGATACTTCCACTGCTTaGTCAGGTATTCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGDTSTA*SGIHLR
Trigger: TCTCAGATGAATACCTGACAAAGCAGTGGAAGTATC...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTGATACTTCCACTGCTTaGTCAGGTATTCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCDTSTA*SGIHLR
Trigger: TCTCAGATGAATACCTGACAAAGCAGTGGAAGTATC...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCACACATCCCATGAAGCTCAATaGGATACTTCCACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: NTFSSKDPPLAHTLRKHTSHEAQ*DTSTAL
Trigger: CAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGA...TGTGTGCTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTAGCAAAGATCCACCATaGGCACACACATTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGSKDPP*AHTLRK
Trigger: CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATCGTGGGATGGTATCTaGGCATTCTGTTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLSWDGI*AFCSCS
Trigger: ACTGCAGGAACAGAATGCCAAGATACCATCCCACGA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS TCA 90 bp CTGAAGTTAACATCATCAACACCCTCATCTTCTTTCAAAAGCAAATaGGTGGAAGTAAAGTTAGAGAGTCCTCTGCTCTCCTGCAACTCT +
Preference number: 5 (lower is better)
Translates to: LKLTSSTPSSSFKSK*VEVKLESPLLSCNS
Trigger: AGAGTTGCAGGAGAGCAGAGGACTCTCTAACTTTACTTCCACTCATTTGCTTTTGAAAGAAGATGAGGGTGTTGATGATGTTAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTCTGAACTTCAGTCCTaGTGGGCTGATAAAGTACAC +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKSELQS*WADKVH
Trigger: GTGTACTTTATCAGCCCACAAGGACTGAAGTTCAGA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTTAGCAAGTGAACTTTaGGATCTGAACTTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGLASEL*DLNFSP
Trigger: AGGACTGAAGTTCAGATCCAAAAGTTCACTTGCTAA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTATCAAGCTGACTTTTTaGTGCAACAGGTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGIKLTF*CNRFTF
Trigger: GAAAGTGAACCTGTTGCACAAAAAAGTCAGCTTGAT...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTTGCCTGAGGTCCGATaGAGAAATATAGTAGCGATG +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKLPEVR*RNIVAM
Trigger: CATCGCTACTATATTTCTCAATCGGACCTCAGGCAA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAACAGGTATTGCCATTTaGCCTGAGGTCCGATTGAGA +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLTGIAI*PEVRLR
Trigger: TCTCAATCGGACCTCAGGCAAAATGGCAATACCTGT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTATTCATCTGAGAACTaGACAATGGTTTTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGYSSEN*TMVFAR
Trigger: TCGGGCAAAAACCATTGTCAAGTTCTCAGATGAATA...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AATTCGGTAAGAGTCGTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATATCCCATGAAGCTCAATaGGATACTTCCACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: NSVRVVAIFTNPMKLNWISHEAQ*DTSTAL
Trigger: CAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGA...TATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAACGACTCTTACCGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATCTGAACTTCAGTCCTaGTGGGCTGATAAAGTACAC +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLSELQS*WADKVH
Trigger: GTGTACTTTATCAGCCCACAAGGACTGAAGTTCAGA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGATAGTCACCTTTCCTTaGGGCTTTCTAACCTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKIVTFP*GFLTFL
Trigger: CAGAAAGGTTAGAAAGCCCAAAGGAAAGGTGACTAT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp ACTAGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTCCACAACTTCTACTTTaGTTCCGATTTCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: TRLLVGLIKISMAGKVVGPQLLL*FRFLQI
Trigger: AATCTGAAGAAATCGGAACAAAAGTAGAAGTTGTGG...ACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AGGCTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTCCACAACTTCTACTTTaGTTCCGATTTCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: RLLVGLIKISMAGKVVGCPQLLL*FRFLQI
Trigger: AATCTGAAGAAATCGGAACAAAAGTAGAAGTTGTGG...ACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATTGCCTGAGGTCCGATaGAGAAATATAGTAGCGATG +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLLPEVR*RNIVAM
Trigger: CATCGCTACTATATTTCTCAATCGGACCTCAGGCAA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp CTTCTAGTTGGGCTAATTAAAATCTCTATGGCTGGAAAGGTGGTTGGTTGTACTTATTCATCTGAGAACTaGACAATGGTTTTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: LLVGLIKISMAGKVVGCTYSSEN*TMVFAR
Trigger: TCGGGCAAAAACCATTGTCAAGTTCTCAGATGAATA...AGTACAACCAACCACCTTTCCAGCCATAGAGATTTTAATTAGCCCAACTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AATTCGGTAAGAGTCGTTGCCATATTTACCAATCCCATGAAGCTCAATTGGATAGATACTTCCACTGCTTaGTCAGGTATTCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: NSVRVVAIFTNPMKLNWIDTSTA*SGIHLR
Trigger: TCTCAGATGAATACCTGACAAAGCAGTGGAAGTATC...TATCCAATTGAGCTTCATGGGATTGGTAAATATGGCAACGACTCTTACCGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATCCCATGAAGCTCAATaGGATACTTCCACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLSHEAQ*DTSTAL
Trigger: CAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGAGCAAAGATCCACCATaGGCACACACATTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKSKDPP*AHTLRK
Trigger: CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGATCAAGCTGACTTTTTaGTGCAACAGGTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKIKLTF*CNRFTF
Trigger: GAAAGTGAACCTGTTGCACAAAAAAGTCAGCTTGAT...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTATTCATCTGAGAACTaGACAATGGTTTTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKYSSEN*TMVFAR
Trigger: TCGGGCAAAAACCATTGTCAAGTTCTCAGATGAATA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAGATACTTCCACTGCTTaGTCAGGTATTCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLDTSTA*SGIHLR
Trigger: TCTCAGATGAATACCTGACAAAGCAGTGGAAGTATC...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
CDS TCA 90 bp TGGCTTAAGAGAAGTCTCTCCATTTTTGTGAAGATAATTAGCAAGTaGACTTTTGGATCTGAACTTCAGTCCTTGTGGGCTGATAAAGTA +
Preference number: 5 (lower is better)
Translates to: WLKRSLSIFVKIISK*TFGSELQSLWADKV
Trigger: TACTTTATCAGCCCACAAGGACTGAAGTTCAGATCCAAAAGTTCACTTGCTAATTATCTTCACAAAAATGGAGAGACTTCTCTTAAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAATCAAGCTGACTTTTTaGTGCAACAGGTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLIKLTF*CNRFTF
Trigger: GAAAGTGAACCTGTTGCACAAAAAAGTCAGCTTGAT...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGCCACAACTTCTACTTTaGTTCCGATTTCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKPQLLL*FRFLQI
Trigger: AATCTGAAGAAATCGGAACAAAAGTAGAAGTTGTGG...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
CDS-3UTR CAA 90 bp TGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTAAGAAAGTGGGATGGTATCTTCTaGAAATATTTTCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: CSNTFSSKDPPLAHTLRKWDGIF*KYFLTS
Trigger: ACTGGTGAGAAAATATTTCAAGAAGATACCATCCCA...CTTTCTTAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS-3UTR CAA 90 bp AAAACATGTTCAAACACATTCAGTAGCAAAGATCCACCATTGGCACACACATTATGGGATGGTATCTTCTaGAAATATTTTCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: KTCSNTFSSKDPPLAHTLWDGIF*KYFLTS
Trigger: ACTGGTGAGAAAATATTTCAAGAAGATACCATCCCA...TAATGTGTGTGCCAATGGTGGATCTTTGCTACTGAATGTGTTTGAACATGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249910.5
ENST00000503197.5
CDS GCA 72 bp CTCCAGCCCAGTCGTGCCCATCGAGCAGGGTCCGGCTaGAGCAACGAGCCCAGCGCCGCAACGCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LQPSRAHRAGSG*SNEPSAATPRV
Trigger: CACCCTGGGCGTTGCGGCGCTGGGCTCGTTGCTGCAGCCGGACCCTGCTCGATGGGCACGACTGGGCTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
ENST00000509828.1
CDS GCA 72 bp CGCGGTCCCCCAGACTCAGACTCTCCAGCCCAGTCGTaGCCATCGAGCAGGGTCCGGCTGCAGCAACGAGCC +
Preference number: 6 (lower is better)
Translates to: RGPPDSDSPAQS*PSSRVRLQQRA
Trigger: GGCTCGTTGCTGCAGCCGGACCCTGCTCGATGGGCACGACTGGGCTGGAGAGTCTGAGTCTGGGGGACCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
ENST00000509828.1
CDS TCA 72 bp CTCTTCAGCTCACGGCACCGGGCTGCAACCGAGGTCTaGATGTTGCGAAAGCGCCCCAGACGCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LFSSRHRAATEV*MLRKRPRRRRC
Trigger: GCAGCGGCGGCGTCTGGGGCGCTTTCGCAACATTCAGACCTCGGTTGCAGCCCGGTGCCGTGAGCTGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000503197.5
ENST00000507208.1
CDS TCA 72 bp CGCCGCAACGCCCAGGGTGTGGGGCGGAGTAAGATGTaGAACCTCTTCAGCTCACGGCACCGGGCTGCAACC +
Preference number: 6 (lower is better)
Translates to: RRNAQGVGRSKM*NLFSSRHRAAT
Trigger: GGTTGCAGCCCGGTGCCGTGAGCTGAAGAGGTTTCACATCTTACTCCGCCCCACACCCTGGGCGTTGCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
CDS CCA 72 bp ACACGCCCCGACCAATCGCTCGCGCTCTGGTTGCGCTaGCGCCTTAGGGGCTCCAGTGCCACCATTGCTTTT +
Preference number: 6 (lower is better)
Translates to: TRPDQSLALWLR*RLRGSSATIAF
Trigger: AAAAGCAATGGTGGCACTGGAGCCCCTAAGGCGCCAGCGCAACCAGAGCGCGAGCGATTGGTCGGGGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS CCA 72 bp TGCAGCAACGAGCCCAGCGCCGCAACGCCCAGGGTGTaGGGCGGAGTAAGATGTGAAACCTCTTCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: CSNEPSAATPRV*GGVRCETSSAH
Trigger: GTGAGCTGAAGAGGTTTCACATCTTACTCCGCCCCACACCCTGGGCGTTGCGGCGCTGGGCTCGTTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
ENST00000509587.1
ENST00000509828.1
CDS CAA 90 bp TCTGGTTGCGCTGGCGCCTTAGGGGCTCCAGTGCCACCATTGCTTTaGCTGCTTTTCTGGCTTTCCCTTTCGGACATGCGCGCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: SGCAGALGAPVPPLL*LLFWLSLSDMRARS
Trigger: GCTCCGAGCGCGCATGTCCGAAAGGGAAAGCCAGAAAAGCAGCAAAAGCAATGGTGGCACTGGAGCCCCTAAGGCGCCAGCGCAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS CAA 90 bp CCTCAGCTGAAGGATACTTCTCCAGAAACTTCCAAAGCACAGGTATaGCCATTTTGCCGGAGGTCATTCGGCGGGTCTGGGACTAGGCGC +
Preference number: 6 (lower is better)
Translates to: PQLKDTSPETSKAQV*PFCRRSFGGSGTRR
Trigger: GCGCCTAGTCCCAGACCCGCCGAATGACCTCCGGCAAAATGGCAATACCTGTGCTTTGGAAGTTTCTGGAGAAGTATCCTTCAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509828.1
CDS GCA 72 bp CTGTGTTCGTGGGATGGTATCTTGGCATTCTGTTCCTaGAGTAGCACCAAACTGAGCAGAAGCGATGGGTTC +
Preference number: 6 (lower is better)
Translates to: LCSWDGILAFCS*SSTKLSRSDGF
Trigger: GAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGCAGGAACAGAATGCCAAGATACCATCCCACGAACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS TCA 72 bp TTGTGGGGGCATTCTGTTCCTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCTTGTAGCAAGGGATTA +
Preference number: 6 (lower is better)
Translates to: LWGHSVPAVAPN*AEAMGSCSKGL
Trigger: TAATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGCAGGAACAGAATGCCCCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505883.1
CDS TCA 72 bp CCGAAGATCGTAGAGACCAAGAGGTTTAAGAAGTTCTaGCACATCTCTCCAGTCTGCGGTTCTTGCTACCTC +
Preference number: 6 (lower is better)
Translates to: PKIVETKRFKKF*HISPVCGSCYL
Trigger: GAGGTAGCAAGAACCGCAGACTGGAGAGATGTGTCAGAACTTCTTAAACCTCTTGGTCTCTACGATCTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
ENST00000509828.1
ENST00000511009.1
ENST00000515266.1
CDS CCA 72 bp CTTCGGGTCCTGAGGTTCCAGTTTGAATTGTTACTTTaGTTTTGTAGATGGGATGTCAGGGCTGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: LRVLRFQFELLL*FCRWDVRAAML
Trigger: CAGCATGGCAGCCCTGACATCCCATCTACAAAACCAAAGTAACAATTCAAACTGGAACCTCAGGACCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
CDS CAA 90 bp ACATCCTTTTTGCACTTGCTTCGGGTCCTGAGGTTCCAGTTTGAATaGTTACTTTGGTTTTGTAGATGGGATGTCAGGGCTGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: TSFLHLLRVLRFQFE*LLWFCRWDVRAAML
Trigger: CAGCATGGCAGCCCTGACATCCCATCTACAAAACCAAAGTAACAATTCAAACTGGAACCTCAGGACCCGAAGCAAGTGCAAAAAGGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
CDS TCA 72 bp GTATCTTGGCATTCTGTTCCTGCAGTAGCACCAAACTaGGCAGAAGCGATGGGTTCTTGTAGCAAGGGATTA +
Preference number: 6 (lower is better)
Translates to: VSWHSVPAVAPN*AEAMGSCSKGL
Trigger: TAATCCCTTGCTACAAGAACCCATCGCTTCTGCTCAGTTTGGTGCTACTGCAGGAACAGAATGCCAAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393278.6
CDS CCA 72 bp CCGAGGAGGTGTCCATTTCTTAAAGGCTTTACGTCGTaGGGGGCTAAGAGCTTCTTTGTTATATTTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PRRCPFLKGFTS*GAKSFFVIFAG
Trigger: TCCAGCAAATATAACAAAGAAGCTCTTAGCCCCCCACGACGTAAAGCCTTTAAGAAATGGACACCTCCTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
ENST00000509587.1
CDS CAA 72 bp GTGGTCTTCAGGGTGCACCAATCCCATGAAGCTCAATaGGATACTTCCACTGCTTTGTCAGGTATTCATCTG +
Preference number: 6 (lower is better)
Translates to: VVFRVHQSHEAQ*DTSTALSGIHL
Trigger: CAGATGAATACCTGACAAAGCAGTGGAAGTATCCAATTGAGCTTCATGGGATTGGTGCACCCTGAAGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503197.5
CDS CAA 72 bp TTGCACTTGCTTCGGGTCCTGAGGTTCCAGTTTGAATaGTTACTTTGGTTTTGTAGATGGGATGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: LHLLRVLRFQFE*LLWFCRWDVRA
Trigger: AGCCCTGACATCCCATCTACAAAACCAAAGTAACAATTCAAACTGGAACCTCAGGACCCGAAGCAAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
CDS CAA 90 bp TCCTGCAACTCTGAACTACTACTTGGCGGCATAAACACATCCTTTTaGCACTTGCTTCGGGTCCTGAGGTTCCAGTTTGAATTGTTACTT +
Preference number: 6 (lower is better)
Translates to: SCNSELLLGGINTSF*HLLRVLRFQFELLL
Trigger: AAGTAACAATTCAAACTGGAACCTCAGGACCCGAAGCAAGTGCAAAAAGGATGTGTTTATGCCGCCAAGTAGTAGTTCAGAGTTGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
CDS CAA 72 bp TTCTCACCAGTGAAGTCTTTCCTGGTTGGTGAGCAGTaGTTGTCCATTTCAGAGCCACGTTTTAAAATGTCA +
Preference number: 6 (lower is better)
Translates to: FSPVKSFLVGEQ*LSISEPRFKMS
Trigger: TGACATTTTAAAACGTGGCTCTGAAATGGACAACAACTGCTCACCAACCAGGAAAGACTTCACTGGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000503197.5
ENST00000507208.1
CDS CAA 90 bp AACTCTGAACTACTACTTGGCGGCATAAACACATCCTTTTTGCACTaGCTTCGGGTCCTGAGGTTCCAGTTTGAATTGTTACTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: NSELLLGGINTSFLH*LRVLRFQFELLLWF
Trigger: AAACCAAAGTAACAATTCAAACTGGAACCTCAGGACCCGAAGCAAGTGCAAAAAGGATGTGTTTATGCCGCCAAGTAGTAGTTCAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000505883.1
ENST00000507208.1
CDS CAA 90 bp TGCTCCAGCATCAGAAATGCAGACAGTTCTATCAAGCTGACTTTTTaGTGCAACAGGTTCACTTTCAGCATCTGCTTTATTACACACAGA +
Preference number: 6 (lower is better)
Translates to: CSSIRNADSSIKLTF*CNRFTFSICFITHR
Trigger: TCTGTGTGTAATAAAGCAGATGCTGAAAGTGAACCTGTTGCACAAAAAAGTCAGCTTGATAGAACTGTCTGCATTTCTGATGCTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
CDS TCA 72 bp TATTGCCATTTTGCCTGGGAAGTAAAAGTAACTGAATaGTTACAAGACTCCAGGTGGGCTGATTTCATGTTC +
Preference number: 6 (lower is better)
Translates to: YCHFAWEVKVTE*LQDSRWADFMF
Trigger: GAACATGAAATCAGCCCACCTGGAGTCTTGTAATCATTCAGTTACTTTTACTTCCCAGGCAAAATGGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511009.1
CDS TCA 72 bp ATCATGAAAAAGTGTTTCTTGAACGAGATTAAAAGGTaGCCGAGGAGGTGTCCATTTCTTAAAGGCTTTACG +
Preference number: 6 (lower is better)
Translates to: IMKKCFLNEIKR*PRRCPFLKGFT
Trigger: CGTAAAGCCTTTAAGAAATGGACACCTCCTCGGTCACCTTTTAATCTCGTTCAAGAAACACTTTTTCATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000249910.5
ENST00000393278.6
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
ENST00000509587.1
ENST00000515266.1
CDS CCA 72 bp ATACAGGCTTGTTTTCCTTCTTTCTATCTGTGTTCGTaGGATGGTATCTTCTTGAAATATTTTCTCACCAGT +
Preference number: 6 (lower is better)
Translates to: IQACFPSFYLCS*DGIFLKYFLTS
Trigger: ACTGGTGAGAAAATATTTCAAGAAGATACCATCCCACGAACACAGATAGAAAGAAGGAAAACAAGCCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249910.5
ENST00000503197.5
ENST00000507208.1
CDS CAA 72 bp ATCAGAAATGCAGACAGTTCTATCAAGCTGACTTTTTaGTGCAACAGGTTCACTTTCAGCATCTGCTTTATT +
Preference number: 6 (lower is better)
Translates to: IRNADSSIKLTF*CNRFTFSICFI
Trigger: AATAAAGCAGATGCTGAAAGTGAACCTGTTGCACAAAAAAGTCAGCTTGATAGAACTGTCTGCATTTCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249910.5
ENST00000429544.7
ENST00000503197.5
ENST00000507208.1
CDS GCA 72 bp GCATCAGAATTGAAAACCCAAAATGGAATTAGAATTTaGTGTTCTGATTGGGAAAGGGATACCTTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: ASELKTQNGIRI*CSDWERDTFFV
Trigger: AACAAAGAAGGTATCCCTTTCCCAATCAGAACAGCAAATTCTAATTCCATTTTGGGTTTTCAATTCTGATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515266.1