RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000071655

Ensembl transcript IDs: ENST00000156825.5, ENST00000434436.8, ENST00000585903.1, ENST00000585967.5, ENST00000589064.5, ENST00000589901.2, ENST00000590550.6, ENST00000590830.5, ENST00000592012.5, ENST00000592361.2, ENST00000592965.2

Found 906 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCTGGGCCGAGGGCTGGGAGGTGCATCCTCGCCACGGGGGTCCTaGGCCTCTCCTCCCTGGTACCCTCTGTGGCGGCAGCGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: WLGRGLGGASSPRGS*ASPPWYPLWRQRWG
Trigger: TCCCCACCGCTGCCGCCACAGAGGGTACCAGGGAGGAGAGGCTCAGGACCCCCGTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp CTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCTGGGAGGTaGATCCTCGCCACGGGGGTCCTGAGCCTCTCCTCCCTGGTACCC +
Preference number: 1 (lower is better)
Translates to: LGSPVVRVAGPRAGR*ILATGVLSLSSLVP
Trigger: GGGTACCAGGGAGGAGAGGCTCAGGACCCCCGTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp CTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACG +
Preference number: 1 (lower is better)
Translates to: LGVSKAGLRRRAWFT*GRGPRLQAAPAGST
Trigger: CGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp GGAGGGAGCCAGGAGCACGGCCTTCCTCCTGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCG +
Preference number: 1 (lower is better)
Translates to: GGSQEHGLPPGCLQG*ASPPSLVHVGPRTA
Trigger: CGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGCTCCTGGCTCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp GCCTTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: AFLLGVSKAGLRRRA*FTWGRGPRLQAAPA
Trigger: TGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 90 bp CCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTCAAGGAGCTGGGACAGCGGGCATGG +
Preference number: 1 (lower is better)
Translates to: PSQLSASRGAELPGT*WLLSSLKELGQRAW
Trigger: CCATGCCCGCTGTCCCAGCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp GAGAGCGGCCTCCTGGGCATGCCACTCAGGCACGGTGAGGCTCTGTaGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTG +
Preference number: 1 (lower is better)
Translates to: ESGLLGMPLRHGEAL*HHQPHGRAESGAVL
Trigger: CAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 90 bp TCTTCCTCACCGGGGCAGCAGGGCCAAGACCCACGATCCCTAGGCTaGGCCAGCGGCACCTCAGGGGGCACGGCCCTTGCCCACAGATGC +
Preference number: 1 (lower is better)
Translates to: SSSPGQQGQDPRSLG*ASGTSGGTALAHRC
Trigger: GCATCTGTGGGCAAGGGCCGTGCCCCCTGAGGTGCCGCTGGCTCAGCCTAGGGATCGTGGGTCTTGGCCCTGCTGCCCCGGTGAGGAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp AGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGCTGGGACAGCGGGCATGGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: SCQQAVAPSCRAPAG*SPVSRSWDSGHGEE
Trigger: CTCCTCCCCATGCCCGCTGTCCCAGCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 90 bp GCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGAGTCCCGTCCTCACGCTGCACAGTG +
Preference number: 1 (lower is better)
Translates to: APPAAWQGREWRRPA*PPQQTRVPSSRCTV
Trigger: CACTGTGCAGCGTGAGGACGGGACTCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp TCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAGGAGCTGGGACAGCGGGCATGGGGA +
Preference number: 1 (lower is better)
Translates to: SQLSASRGAELPGTC*LLSSLKELGQRAWG
Trigger: TCCCCATGCCCGCTGTCCCAGCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp GAGCGTCTGGGAGCCTCACCCTGTCCCAGTGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCAC +
Preference number: 1 (lower is better)
Translates to: ERLGASPCPSGSWHP*ERQHHPKAGCLCRH
Trigger: GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCCACTGGGACAGGGTGAGGCTCCCAGACGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp GAGTGTGTGCGGTGGTCAGAAGGGCTGTCCCTGTCTGCCTGGGTCTaGGGGCTGCAGGGACAGCAAGGCACGGGCCCTGGGTGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: ECVRWSEGLSLSAWV*GLQGQQGTGPGCGR
Trigger: CCTGCCACACCCAGGGCCCGTGCCTTGCTGTCCCTGCAGCCCCCAGACCCAGGCAGACAGGGACAGCCCTTCTGACCACCGCACACACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp GGTGGCGAGTGTGTGCGGTGGTCAGAAGGGCTGTCCCTGTCTGCCTaGGTCTGGGGGCTGCAGGGACAGCAAGGCACGGGCCCTGGGTGT +
Preference number: 1 (lower is better)
Translates to: GGECVRWSEGLSLSA*VWGLQGQQGTGPGC
Trigger: ACACCCAGGGCCCGTGCCTTGCTGTCCCTGCAGCCCCCAGACCCAGGCAGACAGGGACAGCCCTTCTGACCACCGCACACACTCGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp GGGGCATCTGCGCCGTGGCCGGTGTCAGAGCCTGGTTCCTGTTCATaGCCGAGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCG +
Preference number: 1 (lower is better)
Translates to: GASAPWPVSEPGSCS*PSPAPWCGRAGLCS
Trigger: CGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACTCGGCCATGAACAGGAACCAGGCTCTGACACCGGCCACGGCGCAGATGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp TCCACGGCGGCCGAGAGCTGTCCCGTGATGGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCCGACAGCAGCGTCTCATCCGTGCAG +
Preference number: 1 (lower is better)
Translates to: STAAESCPVMGMVLV*RALAMADSSVSSVQ
Trigger: CTGCACGGATGAGACGCTGCTGTCGGCCATCGCCAGCGCCCTGCACACTAGCACCATGCCCATCACGGGACAGCTCTCGGCCGCCGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR CCA 90 bp TTAGCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTaGGCCGAGGGCTGGGAGGTGCATCCTCGCCACGGGGGTCCTGAG +
Preference number: 1 (lower is better)
Translates to: LAGVAETREPCGPCG*AEGWEVHPRHGGPE
Trigger: CTCAGGACCCCCGTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGCTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 90 bp CCTGGGTGTGGCAGGAGAGGCATGATGCCCCTTAGCTGGTGTTGCTaGGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCTG +
Preference number: 1 (lower is better)
Translates to: PGCGRRGMMPLSWCC*DSGALWSVWLGRGL
Trigger: CAGCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGCTAAGGGGCATCATGCCTCTCCTGCCACACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp ACGATCCCTAGGCTGAGCCAGCGGCACCTCAGGGGGCACGGCCCTTaGCCACAGATGCCCAGGCCGGCCTGGTCTTCTCTGAATACCCCT +
Preference number: 1 (lower is better)
Translates to: TIPRLSQRHLRGHGP*PQMPRPAWSSLNTP
Trigger: AGGGGTATTCAGAGAAGACCAGGCCGGCCTGGGCATCTGTGGGCAAGGGCCGTGCCCCCTGAGGTGCCGCTGGCTCAGCCTAGGGATCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp GCCGTGGCCGGTGTCAGAGCCTGGTTCCTGTTCATGGCCGAGTCCTaGTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGG +
Preference number: 1 (lower is better)
Translates to: AVAGVRAWFLFMAES*SMVWPGRAVFVHPW
Trigger: CCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACTCGGCCATGAACAGGAACCAGGCTCTGACACCGGCCACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 90 bp CCTTCAGGTCCAGAAAGCAGCTTCCAGTGGCCATGGCTAGTGAGCTaGAGTCCAGGGTCCCGGGGCACAGCTCCCCTCCCTGCAGCGGCT +
Preference number: 1 (lower is better)
Translates to: PSGPESSFQWPWLVS*SPGSRGTAPLPAAA
Trigger: AGCCGCTGCAGGGAGGGGAGCTGTGCCCCGGGACCCTGGACTTCAGCTCACTAGCCATGGCCACTGGAAGCTGCTTTCTGGACCTGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 90 bp AGCCAGGTCCCACCCCCTGCAGGCCCTTGGGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGTCGAAGGCGTTCAGGCCGCTCAGCT +
Preference number: 1 (lower is better)
Translates to: SQVPPPAGPWGGPWS*PAPQQCRRRSGRSA
Trigger: AGCTGAGCGGCCTGAACGCCTTCGACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR CCA 90 bp CAGTGGCTCCTGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: QWLLAPLGASAPPQS*VPVSPLNRRETEAG
Trigger: CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp CTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTG +
Preference number: 1 (lower is better)
Translates to: LAVEHSGSAGRPSPD*QRLEFGFQKRRLAL
Trigger: CAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 90 bp CAGACCAAGGCCAGGACATGGCCAGAACCCCGGGATCAGAGGGACTaGTCGGGGTCTGTCAGTGACAGGAAGCTGGGCTGCGACAGAGAG +
Preference number: 1 (lower is better)
Translates to: QTKARTWPEPRDQRD*SGSVSDRKLGCDRE
Trigger: CTCTCTGTCGCAGCCCAGCTTCCTGTCACTGACAGACCCCGATCAGTCCCTCTGATCCCGGGGTTCTGGCCATGTCCTGGCCTTGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp CCCAGGCCGGCCTGGTCTTCTCTGAATACCCCTAAGCCTGACTCTTaGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTGGCCCTGTC +
Preference number: 1 (lower is better)
Translates to: PRPAWSSLNTPKPDS*VVNVREVGGPAGPV
Trigger: GACAGGGCCAGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGTATTCAGAGAAGACCAGGCCGGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp CGTTCCGGAAGCTGGGGGTGTTTTCCATGGGCACCTCCGGGCTCCTaGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGG +
Preference number: 1 (lower is better)
Translates to: RSGSWGCFPWAPPGS*RFAVTAMRDTHRRG
Trigger: CCCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGAGGTGCCCATGGAAAACACCCCCAGCTTCCGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 90 bp CAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGGGCATGCCACTCAGGCACGGTGAGG +
Preference number: 1 (lower is better)
Translates to: QGRLPDDVPRLCYIY*RRAASWACHSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 90 bp TCTCACAGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTaGTCCGGTATGGCCCTGTCCGAAAGAACGTTCCGGAAGCTGGGG +
Preference number: 1 (lower is better)
Translates to: SHRQCPATRYQKAES*SGMALSERTFRKLG
Trigger: CCCCAGCTTCCGGAACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp CACCTCAGGGGGCACGGCCCTTGCCCACAGATGCCCAGGCCGGCCTaGTCTTCTCTGAATACCCCTAAGCCTGACTCTTGGGTTGTGAAT +
Preference number: 1 (lower is better)
Translates to: HLRGHGPCPQMPRPA*SSLNTPKPDSWVVN
Trigger: ATTCACAACCCAAGAGTCAGGCTTAGGGGTATTCAGAGAAGACCAGGCCGGCCTGGGCATCTGTGGGCAAGGGCCGTGCCCCCTGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 90 bp ATGGCCAGAACCCCGGGATCAGAGGGACTGATCGGGGTCTGTCAGTaGCAGGAAGCTGGGCTGCGACAGAGAGGGAGAGACAGCAAGAGA +
Preference number: 1 (lower is better)
Translates to: MARTPGSEGLIGVCQ*QEAGLRQRGRDSKR
Trigger: TCTCTTGCTGTCTCTCCCTCTCTGTCGCAGCCCAGCTTCCTGTCACTGACAGACCCCGATCAGTCCCTCTGATCCCGGGGTTCTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp AAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: KRRLALAHREGCPMT*LDCVTFTEGERPPG
Trigger: CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 90 bp CCCGGGATCAGAGGGACTGATCGGGGTCTGTCAGTGACAGGAAGCTaGGCTGCGACAGAGAGGGAGAGACAGCAAGAGACAGAGACAGAG +
Preference number: 1 (lower is better)
Translates to: PGIRGTDRGLSVTGS*AATERERQQETETE
Trigger: CTCTGTCTCTGTCTCTTGCTGTCTCTCCCTCTCTGTCGCAGCCCAGCTTCCTGTCACTGACAGACCCCGATCAGTCCCTCTGATCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp TCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTaGGGGTCCCCAAGGTTTCAGGGAGAGAGGAAAGGACCCTCAAGC +
Preference number: 1 (lower is better)
Translates to: SPGTTSSKGQYCLGL*GSPRFQGERKGPSS
Trigger: GCTTGAGGGTCCTTTCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp TGGCCCTGTCCGAAAGAACGTTCCGGAAGCTGGGGGTGTTTTCCATaGGCACCTCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGG +
Preference number: 1 (lower is better)
Translates to: WPCPKERSGSWGCFP*APPGSWRFAVTAMR
Trigger: CCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGAGGTGCCCATGGAAAACACCCCCAGCTTCCGGAACGTTCTTTCGGACAGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp AGTCTTGCTCCGGTATGGCCCTGTCCGAAAGAACGTTCCGGAAGCTaGGGGTGTTTTCCATGGGCACCTCCGGGCTCCTGGAGATTTGCT +
Preference number: 1 (lower is better)
Translates to: SLAPVWPCPKERSGS*GCFPWAPPGSWRFA
Trigger: AGCAAATCTCCAGGAGCCCGGAGGTGCCCATGGAAAACACCCCCAGCTTCCGGAACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp AGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATaGCCCTGTCCGAAAGAACGTTCCGGAAGCTGGGGGTGTTTTCCA +
Preference number: 1 (lower is better)
Translates to: SAQPPATRKLSLAPV*PCPKERSGSWGCFP
Trigger: TGGAAAACACCCCCAGCTTCCGGAACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 90 bp CACAGCAGACCAGAGTCCCGTCCTCACGCTGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: HSRPESRPHAAQWVM*VSKLRLQTEKPSQL
Trigger: CAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCAGCGTGAGGACGGGACTCTGGTCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 90 bp TTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTC +
Preference number: 1 (lower is better)
Translates to: FRSEGWRWHTGKAAR*RASTVLHLLKESGL
Trigger: GAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 90 bp GACAGAATCTCACAGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTaGGTCTTGCTCCGGTATGGCCCTGTCCGAAAGAACGTTCCGGAA +
Preference number: 1 (lower is better)
Translates to: DRISQAVPSHPLPES*VLLRYGPVRKNVPE
Trigger: TTCCGGAACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCTGTGAGATTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp GGACCCCTTGAATCTGGAGCGAGTGTGACAGAATCTCACAGGCAGTaGCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATG +
Preference number: 1 (lower is better)
Translates to: GPLESGASVTESHRQ*PATRYQKAESCSGM
Trigger: CATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCTGTGAGATTCTGTCACACTCGCTCCAGATTCAAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp ACAACTCACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTaGCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGAAA +
Preference number: 1 (lower is better)
Translates to: TTHFSPGTTSSKGQY*LGLWGSPRFQGERK
Trigger: TTTCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTGAGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp ACAGAGACAGAGAGAGACCAAGGGAGACAGGGACACAGTGGGAGATaGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGG +
Preference number: 1 (lower is better)
Translates to: TETERDQGRQGHSGR*EEGNRVSLSAGQMR
Trigger: CCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTCCCACTGTGTCCCTGTCTCCCTTGGTCTCTCTCTGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp GGGATAGACAGAGACAGAGAGAGACCAAGGGAGACAGGGACACAGTaGGAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: GIDRDRERPRETGTQ*EMGRGKQSVSECRA
Trigger: TGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTCCCACTGTGTCCCTGTCTCCCTTGGTCTCTCTCTGTCTCTGTCTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp CGCTTTCAGCCTTTCATCACCCAACCAAAGACAGAAGCTCAAACGTaGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGC +
Preference number: 1 (lower is better)
Translates to: RFQPFITQPKTEAQT*APKSSGRTELQAPS
Trigger: GCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGTCTTTGGTTGGGTGATGAAAGGCTGAAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 90 bp GCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATaGGCACTTGACTTGTTTACACTTTTTGGACCCCTTGAATCTGGA +
Preference number: 1 (lower is better)
Translates to: APWCGRAGLCSFIPG*ALDLFTLFGPLESG
Trigger: TCCAGATTCAAGGGGTCCAAAAAGTGTAAACAAGTCAAGTGCCCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 90 bp TTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAG +
Preference number: 1 (lower is better)
Translates to: FGFQKRRLALAHREG*PMTCLDCVTFTEGE
Trigger: CTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALLRRRA*FTWGRG
Trigger: TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAG...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTG +
Preference number: 2 (lower is better)
Translates to: AGPWRADGGAALPQLPRSGCLQG*ASPPSL
Trigger: CAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCC...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGCACCACCAGCCGCATaGCAGGGCAGAGAGTGGCGC +
Preference number: 2 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRAPPAA*QGREWR
Trigger: GCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCC +
Preference number: 2 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPGSWHP*ERQHHP
Trigger: GGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCC...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGAGGGCACCAGGGACTaGCCGCAGAGTCCACTCGGG +
Preference number: 2 (lower is better)
Translates to: AGPWRADGGAALPQLPRSEGTRD*PQSPLG
Trigger: CCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTC...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGCGGGACGGGGACGCTTaGGCTCTTCTAGGGAGATGG +
Preference number: 2 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRRDGDA*ALLGRW
Trigger: CCATCTCCCTAGAAGAGCCCAAGCGTCCCCGTCCCG...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
3UTR-3UTR TCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCTGCCCTGGCCCTTaGGCCCGTCCTGAGGATTTG +
Preference number: 2 (lower is better)
Translates to: AGPWRADGGAALPQLPRSGCPGP*ARPEDL
Trigger: CAAATCCTCAGGACGGGCTCAAGGGCCAGGGCAGCC...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCCCACGATCCCTAGGCTaGGCCAGCGGCACCTCAGGG +
Preference number: 2 (lower is better)
Translates to: AGVAETREPCGPCGWAEGPRSLG*ASGTSG
Trigger: CCCTGAGGTGCCGCTGGCTCAGCCTAGGGATCGTGG...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCAGGCAGTCCCCACTaGCAGGACCCGACTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGPGSPH*QDPTPG
Trigger: CCCTGGAGTCGGGTCCTGGCAGTGGGGACTGCCTGG...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
3UTR-3UTR CCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTG +
Preference number: 2 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGRAWFT*GRGPRL
Trigger: CAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCG...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: AVSKPWRRAAGHLLAALQARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...CTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCTGGCAGGGCAGAGAGTaGCGCCGTCCTGCATGCCCC +
Preference number: 2 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRWQGRE*RRPACP
Trigger: GGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCA...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCACCACCAGCCGCATaGCAGGGCAGAGAGTGGCGC +
Preference number: 2 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPAPPAA*QGREWR
Trigger: GCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCC +
Preference number: 2 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAGSWHP*ERQHHP
Trigger: GGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCCGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRRPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTGCAGCCCCAGCTGTGTaGCCCGAGGCCCCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPAAPAV*PEAPGS
Trigger: ACTTCCCGGGGCCTCGGGGCACACAGCTGGGGCTGC...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRRAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTG +
Preference number: 2 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVGCLQG*ASPPSL
Trigger: CAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCC...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGGAGGGTCTTTCGGGTaGGGGCAGCCCCAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAGGSFG*GQPQLC
Trigger: ACACAGCTGGGGCTGCCCCCACCCGAAAGACCCTCC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRLPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 2 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: RRAPGTGRRVHSGQASVARAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHELPGT*WLLSSL
Trigger: GAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGA +
Preference number: 2 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVWRRPA*PPQQTR
Trigger: TCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCA...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GGGGTTCTTCTCCACGGCGGCCGAGAGCTGTCCCGTGATGGGCATGGTGCTAGTCCAGGTCCCACCCCCTaGAGGCCCTTGGGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: GVLLHGGRELSRDGHGASPGPTP*RPLGRS
Trigger: GGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGG...ACTAGCACCATGCCCATCACGGGACAGCTCTCGGCCGCCGTGGAGAAGAACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR-3UTR CCA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTG +
Preference number: 2 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSGCLQG*ASPPSL
Trigger: CAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCC...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 2 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTA +
Preference number: 2 (lower is better)
Translates to: AGPWRADGGAALPQLPRSAPPQS*VPVSPL
Trigger: TAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGC...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTA +
Preference number: 2 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRAPPQS*VPVSPL
Trigger: TAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTCGGGGCAGGCGTCTGTaGCTTGGAACCTGCCCTCGC +
Preference number: 2 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPRGRRL*LGTCPR
Trigger: GCGAGGGCAGGTTCCAAGCCACAGACGCCTGCCCCG...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCAAGCTGCCAGCCCACTaGCTCCATGCGGGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVKLPAH*LHAGPW
Trigger: CCAAGGACCCGCATGGAGGCAGTGGGCTGGCAGCTT...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRRPSPD*QRLEFG
Trigger: ACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCG...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGCGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWRPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGGCAGCGACCAGATCCTaGCTGGGGCAGCACCGGGAC +
Preference number: 2 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWAATRS*LGQHRD
Trigger: GTCCCGGTGCTGCCCCAGCCAGGATCTGGTCGCTGC...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCATTAGCTGGGCGTGGTaGCTACTCGGGAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: AGVAETREPCGPCGWAEGISWAW*LLGRLR
Trigger: CCTCAGCCTCCCGAGTAGCCACCACGCCCAGCTAAT...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTG +
Preference number: 2 (lower is better)
Translates to: RQCPATRYQKAESCSGMARAWFT*GRGPRL
Trigger: CAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCG...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGCTGTCAGCAAGCCGTaGCGCCGAGCTGCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSEAVSKP*RRAAGH
Trigger: GTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCAGCCCAGGGCCTGGATaGGCTTCCAGTGGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RQCPATRYQKAESCSGMASPGPG*ASSGEG
Trigger: GCCCTCCCCACTGGAAGCCCATCCAGGCCCTGGGCT...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGTCTCGGCAGGGCCTCTaGAAAGGACAGGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRSRQGL*KGQGGL
Trigger: CAGCCCTCCCTGTCCTTTCCAGAGGCCCTGCCGAGA...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
3UTR-3UTR TCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGCCAGGGCAGGGAATTTaGCGAGGGCCTGAGCACTGG +
Preference number: 2 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALPGQGI*RGPEHW
Trigger: CCAGTGCTCAGGCCCTCGTCAAATTCCCTGCCCTGG...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGTGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRCRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGCTGTCAGCAAGCCGTaGCGCCGAGCTGCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTAVSKP*RRAAGH
Trigger: GTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGTGGCAGGGCAGAGAGTaGCGCCGTCCTGCATGCCCC +
Preference number: 2 (lower is better)
Translates to: SGLLEICCDSHEGHTQARWQGRE*RRPACP
Trigger: GGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCA...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGAAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCCCGACTGGCAGCGGCTaGAGTTTGGTTTTCAGAAGC +
Preference number: 2 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPPTGSG*SLVFRS
Trigger: GCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGG...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp GCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTC +
Preference number: 2 (lower is better)
Translates to: AVSKPWRRAAGHLLAALQAQWVM*VSKLRL
Trigger: GAGGCGTAGTTTTGAAACTCACATCACCCACTGTGC...CTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCCTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCAGGGCAGGCTGGTCATaGGGCCCCCACGAAAGATCC +
Preference number: 2 (lower is better)
Translates to: RQCPATRYQKAESCSGMARAGWS*GPHERS
Trigger: GGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCT...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSEELPGT*WLLSSL
Trigger: GAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTC...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 2 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGCAGAGTGTCTCTGAGTaGCGGGCAGATGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALQSVSE*RADEGR
Trigger: CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTG...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CACCATGAAGGCTTTGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCGGGGTTGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCC +
Preference number: 2 (lower is better)
Translates to: HHEGFAQGLRGVEPYAGVGMVLV*RALAMA
Trigger: GGCCATCGCCAGCGCCCTGCACACTAGCACCATGCC...AACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTG +
Preference number: 2 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTGCLQG*ASPPSL
Trigger: CAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACAGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: LALAHREGCPMTCLDCVTGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGCTGTCAGCAAGCCGTaGCGCCGAGCTGCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVAVSKP*RRAAGH
Trigger: GTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCTTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGCGGGGCAGGCGTCTGTaGCTTGGAACCTGCCCTCGC +
Preference number: 2 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWRGRRL*LGTCPR
Trigger: GCGAGGGCAGGTTCCAAGCCACAGACGCCTGCCCCG...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGGAGGGCACCAGGGACTaGCCGCAGAGTCCACTCGGG +
Preference number: 2 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWEGTRD*PQSPLG
Trigger: CCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTC...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTCGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: TPKPDSWVVNVREVGGPARPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCCCTAAGCCTGACTCTTaGGTTGTGAATGTCCGCGAG +
Preference number: 2 (lower is better)
Translates to: AGVAETREPCGPCGWAEGPKPDS*VVNVRE
Trigger: CTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGG...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGGCCCCATGCCAGGTCTaGGTTCTGGGGCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLAPCQV*VLGLEC
Trigger: ACACTCCAGCCCCAGAACCCAGACCTGGCATGGGGC...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCAGCCACTCAGGCACGGTaGGGCTCTGTGGCACCACCA +
Preference number: 2 (lower is better)
Translates to: LKRGHQSLADAPNSRLQAATQAR*GSVAPP
Trigger: TGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGC...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCCGGGAGGCTGAGGCTTaGACCCAGAAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RQCPATRYQKAESCSGMAREAEA*TQKVEV
Trigger: AACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCG...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAACGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSERAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGGTCCCGTCCTCACGCTaGACAGTGGGTGATGTGAGT +
Preference number: 2 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALVPSSR*TVGDVS
Trigger: ACTCACATCACCCACTGTGCAGCGTGAGGACGGGAC...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGAC +
Preference number: 2 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSEAHREG*PMTCLD
Trigger: GTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGC...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 2 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGAGCTCCCTGGAGAGCTaGGCACCTCGAGGAGCGTCT +
Preference number: 2 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGSSLES*APRGAS
Trigger: AGACGCTCCTCGAGGTGCCCAGCTCTCCAGGGAGCT...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGGGCGAGTGTGTGCGGTaGTCAGAAGGGCTGTCCCTG +
Preference number: 2 (lower is better)
Translates to: SGLLEICCDSHEGHTQARGECVR*SEGLSL
Trigger: CAGGGACAGCCCTTCTGACCACCGCACACACTCGCC...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGGAGATGGGAAGCTCTTaGGAGGCACCCGTCATCCCA +
Preference number: 2 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGEMGSS*EAPVIP
Trigger: TGGGATGACGGGTGCCTCCCAAGAGCTTCCCATCTC...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590550.6
3UTR-3UTR TCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGTTCAGCCTGAGGGTCTaGGACTTTTCCAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLFSLRV*DFSRAG
Trigger: CCCTGCCCTGGAAAAGTCTCAGACCCTCAGGCTGAA...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp GGGGTTCTTCTCCACGGCGGCCGAGAGCTGTCCCGTGATGGGCATGGTGCTAGTGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGT +
Preference number: 2 (lower is better)
Translates to: GVLLHGGRELSRDGHGASGGPWS*PAPQQC
Trigger: ACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCC...ACTAGCACCATGCCCATCACGGGACAGCTCTCGGCCGCCGTGGAGAAGAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR-3UTR GCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGA +
Preference number: 2 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGWRRPA*PPQQTR
Trigger: TCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCA...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGAGGGTCTTTCGGGTaGGGGCAGCCCCAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVGGSFG*GQPQLC
Trigger: ACACAGCTGGGGCTGCCCCCACCCGAAAGACCCTCC...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LALAHREGCPMTCLDCVTCRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGCTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWLPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CAA 90 bp GACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTaGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTT +
Preference number: 2 (lower is better)
Translates to: DWQRLEFGFQKRRLA*AHREGCPMTCLDCV
Trigger: AACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCAGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTA +
Preference number: 2 (lower is better)
Translates to: LKRGHQSLADAPNSRLQAGKAAR*RASTVL
Trigger: TAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCC...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGAC +
Preference number: 2 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVAHREG*PMTCLD
Trigger: GTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGC...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGACTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGLRRRA*FTWGRG
Trigger: TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAG...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CAA 90 bp CTCACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTaGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: LTSHRARPLAKASIA*ACGGPQGFRERGKD
Trigger: GTCCTTTCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGCTGACTCTTGGGTTGTaGATGTCCGCGAGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWLTLGL*MSARLG
Trigger: CCCCAACCTCGCGGACATTCACAACCCAAGAGTCAG...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTGTCCCGTCCTCACGCTaGACAGTGGGTGATGTGAGT +
Preference number: 2 (lower is better)
Translates to: TPKPDSWVVNVREVGGPAVPSSR*TVGDVS
Trigger: ACTCACATCACCCACTGTGCAGCGTGAGGACGGGAC...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGTCCCGTCCTCACGCTaGACAGTGGGTGATGTGAGT +
Preference number: 2 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTVPSSR*TVGDVS
Trigger: ACTCACATCACCCACTGTGCAGCGTGAGGACGGGAC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTG +
Preference number: 2 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLRAWFT*GRGPRL
Trigger: CAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCG...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGTTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGCTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR GCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 2 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSEGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGACTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGLPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp ATCACCCAACCAAAGACAGAAGCTCAAACGTGGGCACCAAAGTCTAGCGGACGCTTGGAGGGCAGACGGTaGAGCGGCGCTTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ITQPKTEAQTWAPKSSGRLEGRR*SGASSA
Trigger: AGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAA...GCGTCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGTCTTTGGTTGGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp AAGGCCAGTATTGCCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGACTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: KASIALACGGPQGFRERGLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...TCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLLPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHRPSPD*QRLEFG
Trigger: ACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCG...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCAGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTC +
Preference number: 2 (lower is better)
Translates to: LKRGHQSLADAPNSRLQAAQWVM*VSKLRL
Trigger: GAGGCGTAGTTTTGAAACTCACATCACCCACTGTGC...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTAC +
Preference number: 2 (lower is better)
Translates to: GFQKRRLALAHREGCPMTTLHSG*CEFQNY
Trigger: GTAGTTTTGAAACTCACATCACCCACTGTGCAGCGT...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCTGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLCRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGGCAGCGGCTGGAGTTTaGTTTTCAGAAGCGAAGGCT +
Preference number: 2 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGAAAGV*FSEAKA
Trigger: AGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGC...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCCTGTGGCGGCAGCGGTaGGGAGCTTGGTCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: WNIIINFCGCPLAISPSPLWRQR*GAWSEG
Trigger: CCCCTCAGACCAAGCTCCCCACCGCTGCCGCCACAG...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR TCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTAC +
Preference number: 2 (lower is better)
Translates to: EMGRGKQSVSECRADEGRTLHSG*CEFQNY
Trigger: GTAGTTTTGAAACTCACATCACCCACTGTGCAGCGT...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGATTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCAGACATGGGCGGGGCTaGGGGCAGCCAAGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: WNIIINFCGCPLAISPSPRHGRG*GQPSGL
Trigger: AAGGCCACTTGGCTGCCCCCAGCCCCGCCCATGTCT...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR GCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 2 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR TCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCCCCTGGATGGGCACTTaGCTTGTTTACACTTTTTGG +
Preference number: 2 (lower is better)
Translates to: WNIIINFCGCPLAISPSPPWMGT*LVYTFW
Trigger: CCAAAAAGTGTAAACAAGTCAAGTGCCCATCCAGGG...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp CCGGGGCAGCAGGGCCAAGACCCACGATCCCTAGGCTaGGCCAGCGGCACCTCAGGGGGCACGGCCCTTGCC +
Preference number: 3 (lower is better)
Translates to: PGQQGQDPRSLG*ASGTSGGTALA
Trigger: GGCAAGGGCCGTGCCCCCTGAGGTGCCGCTGGCTCAGCCTAGGGATCGTGGGTCTTGGCCCTGCTGCCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp CCTGTGGTCCGTGTGGCTGGGCCGAGGGCTGGGAGGTaGATCCTCGCCACGGGGGTCCTGAGCCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: PVVRVAGPRAGR*ILATGVLSLSS
Trigger: GGAGGAGAGGCTCAGGACCCCCGTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCCACACGGACCACAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp TCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: SKAGLRRRAWFT*GRGPRLQAAPA
Trigger: TGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp CTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCG +
Preference number: 3 (lower is better)
Translates to: LGVSKAGLRRRA*FTWGRGPRLQA
Trigger: CGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp CCACTGCCTCCATGCGGGTCCTTGGAGGGCAGACGGTaGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCC +
Preference number: 3 (lower is better)
Translates to: PLPPCGSLEGRR*SGASSAPAVRP
Trigger: GGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGGCAGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp GCTCAGGCTTCCCCGCCCCATGCCAGGTCTGGGTTCTaGGGCTGGAGTGTGGAGCCTCGGTGCGCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: AQASPPHARSGF*GWSVEPRCAQG
Trigger: CCCCTGGGCGCACCGAGGCTCCACACTCCAGCCCCAGAACCCAGACCTGGCATGGGGCGGGGAAGCCTGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp GCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGAGTCCCGTCCTCACGC +
Preference number: 3 (lower is better)
Translates to: AAWQGREWRRPA*PPQQTRVPSSR
Trigger: GCGTGAGGACGGGACTCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 72 bp AGGCTGAGCCAGCGGCACCTCAGGGGGCACGGCCCTTaGCCACAGATGCCCAGGCCGGCCTGGTCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: RLSQRHLRGHGP*PQMPRPAWSSL
Trigger: CAGAGAAGACCAGGCCGGCCTGGGCATCTGTGGGCAAGGGCCGTGCCCCCTGAGGTGCCGCTGGCTCAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp CCTCGAGGAGCGTCTGGGAGCCTCACCCTGTCCCAGTaGCTCCTGGCACCCCTGGGAGCGTCAGCACCACCC +
Preference number: 3 (lower is better)
Translates to: PRGASGSLTLSQ*LLAPLGASAPP
Trigger: GGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCCACTGGGACAGGGTGAGGCTCCCAGACGCTCCTCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp GTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTaGGCCGAGGGCTGGGAGGTGCATCCTCGCCACGGG +
Preference number: 3 (lower is better)
Translates to: VAETREPCGPCG*AEGWEVHPRHG
Trigger: CCCGTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCGCAGGCGTCTGTGGCTaGGAACCTGCCCTCGCCAAG +
Preference number: 3 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVAGVCG*EPALAK
Trigger: CTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTGC...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 72 bp CAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGCTGGGACAGCGGGCAT +
Preference number: 3 (lower is better)
Translates to: QAVAPSCRAPAG*SPVSRSWDSGH
Trigger: ATGCCCGCTGTCCCAGCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp TCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAGGAGCTGGGACAGCGG +
Preference number: 3 (lower is better)
Translates to: SASRGAELPGTC*LLSSLKELGQR
Trigger: CCGCTGTCCCAGCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CAA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGGAGATGGGAAGCTCTaGGGAGGCACCCGTCATCCC +
Preference number: 3 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGGDGKL*GGTRHP
Trigger: GGGATGACGGGTGCCTCCCAAGAGCTTCCCATCTCC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
3UTR GCA 72 bp CTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTCAAGGAGCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: LSASRGAELPGT*WLLSSLKELGQ
Trigger: CTGTCCCAGCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 72 bp TCCCAAGCACATCTGTGTTCACCAGGCAGTCCCCACTaGCAGGACCCGACTCCAGGGAGCCCCCGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: SQAHLCSPGSPH*QDPTPGSPRGP
Trigger: GGGGCCACGGGGGCTCCCTGGAGTCGGGTCCTGGCAGTGGGGACTGCCTGGTGAACACAGATGTGCTTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590550.6
3UTR CCA 72 bp CTCCTGGGCATGCCACTCAGGCACGGTGAGGCTCTGTaGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGC +
Preference number: 3 (lower is better)
Translates to: LLGMPLRHGEAL*HHQPHGRAESG
Trigger: GCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGCATGCCCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp AAGCTCCCTGGAGAGCTGGGCACCTCGAGGAGCGTCTaGGAGCCTCACCCTGTCCCAGTGGCTCCTGGCACC +
Preference number: 3 (lower is better)
Translates to: KLPGELGTSRSV*EPHPVPVAPGT
Trigger: GGTGCCAGGAGCCACTGGGACAGGGTGAGGCTCCCAGACGCTCCTCGAGGTGCCCAGCTCTCCAGGGAGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 72 bp GCCGAGAGCTGTCCCGTGATGGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCCGACAGCAGCGTCTCA +
Preference number: 3 (lower is better)
Translates to: AESCPVMGMVLV*RALAMADSSVS
Trigger: TGAGACGCTGCTGTCGGCCATCGCCAGCGCCCTGCACACTAGCACCATGCCCATCACGGGACAGCTCTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR CCA 72 bp GCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGGGCAGCCCCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: ALPEAGLCRGRA*RVFRVGAAPAV
Trigger: CACAGCTGGGGCTGCCCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CAA 90 bp GTGCAGGGCGCTGGCGATGGCCGACAGCAGCGTCTCATCCGTGCAGCCAGGTCCGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATG +
Preference number: 3 (lower is better)
Translates to: VQGAGDGRQQRLIRAARSGRSMV*TSSSAM
Trigger: CATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCC...GGACCTGGCTGCACGGATGAGACGCTGCTGTCGGCCATCGCCAGCGCCCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR TCA 72 bp GGCAGGAGAGGCATGATGCCCCTTAGCTGGTGTTGCTaGGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: GRRGMMPLSWCC*DSGALWSVWLG
Trigger: GCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGCTAAGGGGCATCATGCCTCTCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp ATCCCCGGGGATCTTTGCGGTGGCGAGTGTGTGCGGTaGTCAGAAGGGCTGTCCCTGTCTGCCTGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: IPGDLCGGECVR*SEGLSLSAWVW
Trigger: CCAGACCCAGGCAGACAGGGACAGCCCTTCTGACCACCGCACACACTCGCCACCGCAAAGATCCCCGGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp TCCAGGGGCATCTGCGCCGTGGCCGGTGTCAGAGCCTaGTTCCTGTTCATGGCCGAGTCCTGCTCCATGGTG +
Preference number: 3 (lower is better)
Translates to: SRGICAVAGVRA*FLFMAESCSMV
Trigger: CACCATGGAGCAGGACTCGGCCATGAACAGGAACCAGGCTCTGACACCGGCCACGGCGCAGATGCCCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGAAAGCGAAGGCTGGCGTaGGCACACAGGGAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRKRRLA*AHREGC
Trigger: GCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTT...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CAA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGC +
Preference number: 3 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHGSGWS*VFRSEG
Trigger: GCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 72 bp GCCAGGACATGGCCAGAACCCCGGGATCAGAGGGACTaGTCGGGGTCTGTCAGTGACAGGAAGCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: ARTWPEPRDQRD*SGSVSDRKLGC
Trigger: GCAGCCCAGCTTCCTGTCACTGACAGACCCCGATCAGTCCCTCTGATCCCGGGGTTCTGGCCATGTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp CCACCCCCTGCAGGCCCTTGGGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGTCGAAGGCGTTCAGGC +
Preference number: 3 (lower is better)
Translates to: PPPAGPWGGPWS*PAPQQCRRRSG
Trigger: GCCTGAACGCCTTCGACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCCCAAGGGCCTGCAGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR GCA 72 bp GGTGTCAGAGCCTGGTTCCTGTTCATGGCCGAGTCCTaGTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTT +
Preference number: 3 (lower is better)
Translates to: GVRAWFLFMAES*SMVWPGRAVFV
Trigger: AACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACTCGGCCATGAACAGGAACCAGGCTCTGACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp TGTCTCTTGCTGAGGGTGGACTCCTCCAGGGGCATCTaGGCCGTGGCCGGTGTCAGAGCCTGGTTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: CLLLRVDSSRGI*AVAGVRAWFLF
Trigger: GAACAGGAACCAGGCTCTGACACCGGCCACGGCGCAGATGCCCCTGGAGGAGTCCACCCTCAGCAAGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp GGGCACGGCCCTTGCCCACAGATGCCCAGGCCGGCCTaGTCTTCTCTGAATACCCCTAAGCCTGACTCTTGG +
Preference number: 3 (lower is better)
Translates to: GHGPCPQMPRPA*SSLNTPKPDSW
Trigger: CCAAGAGTCAGGCTTAGGGGTATTCAGAGAAGACCAGGCCGGCCTGGGCATCTGTGGGCAAGGGCCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp GGCCTCCCAGCCTTCAGGTCCAGAAAGCAGCTTCCAGTGGCCATGGCTAGTGAGATCCCTCAGACGGCCTaGGGCCAGAAGCTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: GLPAFRSRKQLPVAMASEIPQTA*GQKLPG
Trigger: TCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGAT...CTCACTAGCCATGGCCACTGGAAGCTGCTTTCTGGACCTGAAGGCTGGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGCGAAAGATCCCAGCATaGGGAGCTCAGGCTTCCCCG +
Preference number: 3 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLRKIPA*GAQASP
Trigger: CGGGGAAGCCTGAGCTCCCAATGCTGGGATCTTTCG...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp ACCCCGGGATCAGAGGGACTGATCGGGGTCTGTCAGTaGCAGGAAGCTGGGCTGCGACAGAGAGGGAGAGAC +
Preference number: 3 (lower is better)
Translates to: TPGSEGLIGVCQ*QEAGLRQRGRD
Trigger: GTCTCTCCCTCTCTGTCGCAGCCCAGCTTCCTGTCACTGACAGACCCCGATCAGTCCCTCTGATCCCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp CGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTaGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAG +
Preference number: 3 (lower is better)
Translates to: RATKSRLAAAGV*FSEAKAGVGTQ
Trigger: CTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp GAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGG +
Preference number: 3 (lower is better)
Translates to: EHSGSAGRPSPD*QRLEFGFQKRR
Trigger: CCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp CTGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACC +
Preference number: 3 (lower is better)
Translates to: LAPLGASAPPQS*VPVSPLNRRET
Trigger: GGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp TGGTTCCTGTTCATGGCCGAGTCCTGCTCCATGGTGTaGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATG +
Preference number: 3 (lower is better)
Translates to: WFLFMAESCSMV*PGRAVFVHPWM
Trigger: CATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACTCGGCCATGAACAGGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTAAGCGAAGGCTGGCGTaGGCACACAGGGAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: TPKPDSWVVNVREVGGPAKRRLA*AHREGC
Trigger: GCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTT...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCTCCTCAGCGCAGGCCTaGTCCAGCGGCGCCTCCCCG +
Preference number: 3 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLSSAQA*SSGASP
Trigger: CGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGGA...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592012.5
3UTR GCA 72 bp CTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTaGTGGCCCTGTCCCCACACCGCTTTCAGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: LLGCECPRGWGT*WPCPHTAFSLS
Trigger: TGAAAGGCTGAAAGCGGTGTGGGGACAGGGCCAGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp CAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTaGTCCGGTATGGCCCTGTCCGAAAGAACGTTCCGG +
Preference number: 3 (lower is better)
Translates to: QCPATRYQKAES*SGMALSERTFR
Trigger: CCGGAACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp CTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGGGCATGCCACTCAGGC +
Preference number: 3 (lower is better)
Translates to: LPDDVPRLCYIY*RRAASWACHSG
Trigger: GCCTGAGTGGCATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 72 bp TCACAGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTaGGTCTTGCTCCGGTATGGCCCTGTCCGAAAGAAC +
Preference number: 3 (lower is better)
Translates to: SQAVPSHPLPES*VLLRYGPVRKN
Trigger: GTTCTTTCGGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp TTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTaGCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: FSPGTTSSKGQY*LGLWGSPRFQG
Trigger: TCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp GTGTTTTCCATGGGCACCTCCGGGCTCCTGGAGATTTaGTGTGACAGCCATGAGGGACACACACAGGCGAGG +
Preference number: 3 (lower is better)
Translates to: VFSMGTSGLLEI*CDSHEGHTQAR
Trigger: CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGAGGTGCCCATGGAAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp TTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTaGCCCTGTCCCCACACCGCTTTCAGCCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: LGCECPRGWGTC*PCPHTAFSLSS
Trigger: TGATGAAAGGCTGAAAGCGGTGTGGGGACAGGGCCAGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR-3UTR CAA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGC +
Preference number: 3 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRGSGWS*VFRSEG
Trigger: GCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR-3UTR CAA 90 bp AAGGCCAGTATTGCCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGAGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGC +
Preference number: 3 (lower is better)
Translates to: KASIALACGGPQGFRERGGSGWS*VFRSEG
Trigger: GCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCC...TCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR GCA 72 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTTACTGAAGGAGAGCGG +
Preference number: 3 (lower is better)
Translates to: LALAHREGCPMT*LDCVTFTEGER
Trigger: CCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp CCGAAAGAACGTTCCGGAAGCTGGGGGTGTTTTCCATaGGCACCTCCGGGCTCCTGGAGATTTGCTGTGACA +
Preference number: 3 (lower is better)
Translates to: PKERSGSWGCFP*APPGSWRFAVT
Trigger: TGTCACAGCAAATCTCCAGGAGCCCGGAGGTGCCCATGGAAAACACCCCCAGCTTCCGGAACGTTCTTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp GCAGACCAGAGTCCCGTCCTCACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTACGCCTCCAGACCGAGA +
Preference number: 3 (lower is better)
Translates to: ADQSPVLTLHSG*CEFQNYASRPR
Trigger: TCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCAGCGTGAGGACGGGACTCTGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR TCA 72 bp GAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTACATTTACTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: EGWRWHTGKAAR*RASTVLHLLKE
Trigger: CTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR GCA 72 bp CAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGACTGTGTTACATTTACT +
Preference number: 3 (lower is better)
Translates to: QKRRLALAHREG*PMTCLDCVTFT
Trigger: AGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CCA 72 bp GCCTGGTCTTCTCTGAATACCCCTAAGCCTGACTCTTaGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCT +
Preference number: 3 (lower is better)
Translates to: AWSSLNTPKPDS*VVNVREVGGPA
Trigger: AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGTATTCAGAGAAGACCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp ACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTaGGGGTCCCCAAGGTTTCAGGGAGAGAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: TTSSKGQYCLGL*GSPRFQGERKG
Trigger: TCCTTTCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp TTACACTTTTTGGACCCCTTGAATCTGGAGCGAGTGTaGCAGAATCTCACAGGCAGTGCCCAGCCACCCGCT +
Preference number: 3 (lower is better)
Translates to: LHFLDPLNLERV*QNLTGSAQPPA
Trigger: AGCGGGTGGCTGGGCACTGCCTGTGAGATTCTGTCACACTCGCTCCAGATTCAAGGGGTCCAAAAAGTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CCA 72 bp CCTTTCATCACCCAACCAAAGACAGAAGCTCAAACGTaGGCACCAAAGTCTAGCGGACGCACCGAACTCCAG +
Preference number: 3 (lower is better)
Translates to: PFITQPKTEAQT*APKSSGRTELQ
Trigger: CTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGTCTTTGGTTGGGTGATGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR TCA 72 bp CCCACTTCACACACGTTAACTGGAAATATCTTCAAATaGACGGCCGTGAGCGTGGTTATTTTGGTAACCAGA +
Preference number: 3 (lower is better)
Translates to: PTSHTLTGNIFK*TAVSVVILVTR
Trigger: TCTGGTTACCAAAATAACCACGCTCACGGCCGTTCATTTGAAGATATTTCCAGTTAACGTGTGTGAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGCAGCCCCAGCTGTGTaGCCCGAGGCCCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALAAPAV*PEAPGS
Trigger: ACTTCCCGGGGCCTCGGGGCACACAGCTGGGGCTGC...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGGGCTGGGCCGAGGGCTaGGAGGTGCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRGWAEG*EVHPRH
Trigger: GTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCC...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCTCAGCGCAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACCAGGTCCCACCCCCTaGAGGCCCTTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PQRRPCPAAPPRHGPAPPPGPTP*RPLGRS
Trigger: GGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGG...TGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGCTGCCCTGGCCCTTaGGCCCGTCCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALGCPGP*ARPEDL
Trigger: CAAATCCTCAGGACGGGCTCAAGGGCCAGGGCAGCC...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALAPAAA*CGTSSR
Trigger: GCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGC...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACGTGCGCCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: QALSSGASPSRASSSTCAAPAAA*CGTSSR
Trigger: GCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGC...GGCGCACGTGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR GCA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCCCGAGGGCTGGGAGGTaGATCCTCGCCACGGGGGTC +
Preference number: 4 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVPRAGR*ILATGV
Trigger: GACCCCCGTGGCGAGGATGCACCTCCCAGCCCTCGG...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGTCCTCCAGGGGCATCTaGGCCGTGGCCGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRSSRGI*AVAGVR
Trigger: TCTGACACCGGCCACGGCGCAGATGCCCCTGGAGGA...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCAAGATGGACGCCGTCTaGCGCACGGGCAGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSKMDAV*RTGSAV
Trigger: CACGGCGCTGCCCGTGCGCCAGACGGCGTCCATCTT...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACGTGCGCCGGAGGGTCTTTCGGGTaGGGGCAGCCCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QALSSGASPSRASSSTCAGGSFG*GQPQLC
Trigger: ACACAGCTGGGGCTGCCCCCACCCGAAAGACCCTCC...GGCGCACGTGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR CCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRGSWHP*ERQHHP
Trigger: GGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALGSWHP*ERQHHP
Trigger: GGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCC...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCTCAGCGCAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCAGAGGGCACCAGGGACTaGCCGCAGAGTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: PQRRPCPAAPPRHGPAPPEGTRD*PQSPLG
Trigger: CCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTC...TGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGCCCTGTGGTCCGTGTaGCTGGGCCGAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSALWSV*LGRGLG
Trigger: TCCCAGCCCTCGGCCCAGCCACACGGACCACAGGGC...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCTCGCCACGGGGGTCCTaGGCCTCTCCTCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPSPRGS*ASPPWY
Trigger: GTACCAGGGAGGAGAGGCTCAGGACCCCCGTGGCGA...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCGCTCTTCCGCTCCATTaGGCCCGGCTCCTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVALPLH*ARLLGP
Trigger: CGGGCCGAGGAGCCGGGCGCAATGGAGCGGAAGAGC...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS-3UTR GCA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRPAAAC*GTSSRS
Trigger: CGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGG...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGCCAGGTCCCACCCCCTaGAGGCCCTTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQPGPTP*RPLGRS
Trigger: GGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGG...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCGCCAGCTCCTCCACGTaGGCCAGCATGTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSASSST*ASMSAI
Trigger: GATGGCCGACATGCTGGCGCACGTGGAGGAGCTGGC...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSWRRPA*PPQQTR
Trigger: TCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCA...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPAHREG*PMTCLD
Trigger: GTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGC...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGGCTTCCCCGCCCCATaGCAGGTCTGGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRGFPAP*QVWVLG
Trigger: CCCCAGAACCCAGACCTGGCATGGGGCGGGGAAGCC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRRAWFT*GRGPRL
Trigger: CAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCG...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCCTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPLRRRA*FTWGRG
Trigger: TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAG...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCACTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPLPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCATGGCAGGGCAGAGAGTaGCGCCGTCCTGCATGCCCC +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSWQGRE*RRPACP
Trigger: GGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCA...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAGSWHP*ERQHHP
Trigger: GGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCCTCACCCTGTCCCAGTaGCTCCTGGCACCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSLTLSQ*LLAPLG
Trigger: TCCCAGGGGTGCCAGGAGCCACTGGGACAGGGTGAG...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACGTGCGCCTCCCTCAGACGGCCTTaGGCCAGAAGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QALSSGASPSRASSSTCASLRRP*ARSSLE
Trigger: CTCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGA...GGCGCACGTGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR CCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCGCAGCGACCAGATCCTaGCTGGGGCAGCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGAATRS*LGQHRD
Trigger: GTCCCGGTGCTGCCCCAGCCAGGATCTGGTCGCTGC...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGGCAGCGACCAGATCCTaGCTGGGGCAGCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: PGCLQGWASPPSLVHVGPAATRS*LGQHRD
Trigger: GTCCCGGTGCTGCCCCAGCCAGGATCTGGTCGCTGC...CGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCAGCCCAGGGCCTGGATaGGCTTCCAGTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALSPGPG*ASSGEG
Trigger: GCCCTCCCCACTGGAAGCCCATCCAGGCCCTGGGCT...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCATCTGGGGCTGGAGTGTaGAGCCTCGGTGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSSGAGV*SLGAPR
Trigger: CCTGGGCGCACCGAGGCTCCACACTCCAGCCCCAGA...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCCTGTGGCGGCAGCGGTaGGGAGCTTGGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGLWRQR*GAWSEG
Trigger: CCCCTCAGACCAAGCTCCCCACCGCTGCCGCCACAG...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGCCCTGGTACCCTCTGTaGCGGCAGCGGTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGCLQGWASPPSLVHVGPPWYPL*RQRWGA
Trigger: AGCTCCCCACCGCTGCCGCCACAGAGGGTACCAGGG...CGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGCCCTGTGGTCCGTGTaGCTGGGCCGAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAALWSV*LGRGLG
Trigger: TCCCAGCCCTCGGCCCAGCCACACGGACCACAGGGC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGCGGGGATCTTTGCGGTaGCGAGTGTGTGCGGTGGTC +
Preference number: 4 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRRGSLR*RVCAVV
Trigger: GACCACCGCACACACTCGCCACCGCAAAGATCCCCG...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCCCGAGTCCTGCTCCATaGTGTGGCCGGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVPSPAP*CGRAGL
Trigger: CAGCCCGGCCCGGCCACACCATGGAGCAGGACTCGG...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACTCCAGGGAGCCCCCGTaGCCCCGCAGCACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHSREPP*PRSTCP
Trigger: AGGGCAGGTGCTGCGGGGCCACGGGGGCTCCCTGGA...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR TCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGGTCGGGCTTGCCCTTaGCCTGGTTGGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRGRACP*PGWRSR
Trigger: ACGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALGKAAR*RASTVL
Trigger: TAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCC...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp GCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGCCATGGCTAGTGAGCTaGAGTCCAGGGTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AVSKPWRRAAGHLLAALQPWLVS*SPGSRG
Trigger: GCCCCGGGACCCTGGACTTCAGCTCACTAGCCATGG...CTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCGAGGCGGGGGACACGTaGGGCTCTTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGEAGDT*GSCCCW
Trigger: CCAGCAGCAGCAAGAGCCTCACGTGTCCCCCGCCTC...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALAPAAA*CGTSSR
Trigger: GCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGC...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGGCAGCGTCTCATCCGTaGAGCCAGGTCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: PGCLQGWASPPSLVHVGPAASHP*SQVPPP
Trigger: AGGGGGTGGGACCTGGCTGCACGGATGAGACGCTGC...CGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCACGCTTCCGCACCTGCTaGACCAGCTCTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPRFRTC*TSSSCF
Trigger: GAAGCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCG...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR GCA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGAGCCGCTTCCGCACCTaGTGCACCAGCTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQSRFRT*CTSSSC
Trigger: GCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCGGCT...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRRAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVELPGT*WLLSSL
Trigger: GAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTC...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGWRRPA*PPQQTR
Trigger: TCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCA...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCACAGCTCCCCTCCCTaGAGCGGCTGTGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRHSSPP*SGCAGP
Trigger: AGGTCCTGCACAGCCGCTGCAGGGAGGGGAGCTGTG...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCACAGAGTGTCTCTGAGTaGCGGGCAGATGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPQSVSE*RADEGR
Trigger: CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTG...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGTGGCCCCGCAGCACCTaGCCTAGACGTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGWPRST*PRRAPS
Trigger: AGATGGAGCACGTCTAGGGCAGGTGCTGCGGGGCCA...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVARAWFT*GRGPRL
Trigger: CAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCG...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVGCLQG*ASPPSL
Trigger: CAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCC...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGCTGTCAGCAAGCCGTaGCGCCGAGCTGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAAVSKP*RRAAGH
Trigger: GTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGCACCACCAGCCGCATaGCAGGGCAGAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRAPPAA*QGREWR
Trigger: GCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALRPSPD*QRLEFG
Trigger: ACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCG...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGTCCCTCAGACGGCCTTaGGCCAGAAGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGSLRRP*ARSSLE
Trigger: CTCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGA...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGCGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQRPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCGAATGTCCGCGAGGTTaGGGGACCTGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSECPRG*GTCWPC
Trigger: ACAGGGCCAGCAGGTCCCCCAACCTCGCGGACATTC...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCAGACATGGGCGGGGCTaGGGGCAGCCAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPRHGRG*GQPSGL
Trigger: AAGGCCACTTGGCTGCCCCCAGCCCCGCCCATGTCT...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGATGTGGTCCGTGTGGCTaGGCCGAGGGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGCGPCG*AEGWEV
Trigger: CACCTCCCAGCCCTCGGCCCAGCCACACGGACCACA...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCGACTCGGGAGCCCTGTaGTCCGTGTGGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGDSGAL*SVWLGR
Trigger: TCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTC...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGCGGGACGGGGACGCTTaGGCTCTTCTAGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQRDGDA*ALLGRW
Trigger: CCATCTCCCTAGAAGAGCCCAAGCGTCCCCGTCCCG...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR TCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCGGGGCTGCGTGGTGTTaGGCCATACGCCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVGAAWC*AIRRGS
Trigger: AGAACCCCGGCGTATGGCTCAACACCACGCAGCCCC...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGCCACTCAGGCACGGTaGGGCTCTGTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRATQAR*GSVAPP
Trigger: TGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGC...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGAGGTCAGGAGTTCGTaGCCAGCCTGGCTAACATGG +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPEVRSS*PAWLTW
Trigger: CCATGTTAGCCAGGCTGGTCACGAACTCCTGACCTC...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALPAAAC*GTSSRS
Trigger: CGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGG...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGGACAGGGAGGGCTGGCTTTAGCGACTCCACGGGACGGGGACGCTTGGGCTCTCCAGGTCCCACCCCCTaGAGGCCCTTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RTGRAGFSDSTGRGRLGSPGPTP*RPLGRS
Trigger: GGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGG...AGAGCCCAAGCGTCCCCGTCCCGTGGAGTCGCTAAAGCCAGCCCTCCCTGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR GCA 90 bp AGGGCGCTGGCGATGGCCGACAGCAGCGTCTCATCCGTGCAGCCAGGTCCCACCGCAGCGTCTCATCCGTaGAGCCAGGTCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: RALAMADSSVSSVQPGPTAASHP*SQVPPP
Trigger: AGGGGGTGGGACCTGGCTGCACGGATGAGACGCTGC...GGTGGGACCTGGCTGCACGGATGAGACGCTGCTGTCGGCCATCGCCAGCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR GCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGWRRPA*PPQQTR
Trigger: TCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCA...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCTGGCGCCGTCCTGCATaGCCCCCACAGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPWRRPA*PPQQTR
Trigger: TCTGGTCTGCTGTGGGGGGCATGCAGGACGGCGCCA...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRAHREG*PMTCLD
Trigger: GTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGCCAGGCAGCCCCTCCTaGTTCCCTTCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQPGSPS*FPSFGR
Trigger: CCTTCCAAAGGAAGGGAAGCAGGAGGGGCTGCCTGG...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCCACAGCTCCCCTCCCTaGAGCGGCTGTGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRHSSPP*SGCAGP
Trigger: AGGTCCTGCACAGCCGCTGCAGGGAGGGGAGCTGTG...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCCCGGGAGGAGGAGGTTaGGGTGAGCCAAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSPGGGG*GEPSLH
Trigger: GTGCAAACTTGGCTCACCGCAACCTCCTCCTCCCGG...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTCCCTCTCCCAGCCCTaGGGGAGCGCCGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSSLSQP*GSAGHS
Trigger: GGAGTGCCCGGCGCTCCCGCAGGGCTGGGAGAGGGA...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR CCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGATTCTCCCAGAAGAGCTaGCGCGGCTGGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGFSQKS*RGWSTA
Trigger: GGCGGTGGACCAGCCGCGCCAGCTCTTCTGGGAGAA...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGCACCACCAGCCGCATaGCAGGGCAGAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAAPPAA*QGREWR
Trigger: GCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTA +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRAPPQS*VPVSPL
Trigger: TAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTA +
Preference number: 4 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGAPPQS*VPVSPL
Trigger: TAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGC...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCTGTCCCAGTGGCTCCTaGCACCCCTGGGAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGCPSGS*HPWERQ
Trigger: CTGACGCTCCCAGGGGTGCCAGGAGCCACTGGGACA...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGCTCACCCTGTCCCAGTaGCTCCTGGCACCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQLTLSQ*LLAPLG
Trigger: TCCCAGGGGTGCCAGGAGCCACTGGGACAGGGTGAG...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCAGCTCCCTGGAGAGCTaGGCACCTCGAGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGSSLES*APRGAS
Trigger: AGACGCTCCTCGAGGTGCCCAGCTCTCCAGGGAGCT...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGTCCCTCAGACGGCCTTaGGCCAGAAGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGCLQGWASPPSLVHVGPSLRRP*ARSSLE
Trigger: CTCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGA...CGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTCGGGGCAGGCGTCTGTaGCTTGGAACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERRGRRL*LGTCPR
Trigger: GCGAGGGCAGGTTCCAAGCCACAGACGCCTGCCCCG...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGAGGGCACCAGGGACTaGCCGCAGAGTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHEGTRD*PQSPLG
Trigger: CCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGAGGCCCCATCAGGGATaGTCACAGTCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGRPHQG*SQSSHR
Trigger: CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCT...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGGAATGTCCGCGAGGTTaGGGGACCTGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRECPRG*GTCWPC
Trigger: ACAGGGCCAGCAGGTCCCCCAACCTCGCGGACATTC...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCACTGCTTCCCTTCCTTTaGAAGGAGCGGTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPLLPFL*KERCWV
Trigger: GACCCAGCACCGCTCCTTCCAAAGGAAGGGAAGCAG...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCTCTGGGGCTGGAGTGTaGAGCCTCGGTGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPASGAGV*SLGAPR
Trigger: CCTGGGCGCACCGAGGCTCCACACTCCAGCCCCAGA...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCGCCAGGTCTGGGTTCTaGGGCTGGAGTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGARSGF*GWSVEP
Trigger: AGGCTCCACACTCCAGCCCCAGAACCCAGACCTGGC...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCGAGTGTGTGCGGTaGTCAGAAGGGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSGECVR*SEGLSL
Trigger: CAGGGACAGCCCTTCTGACCACCGCACACACTCGCC...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCCTGCTCCATGGTGTaGCCGGGCCGGGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVSCSMV*PGRAVF
Trigger: GAACACAGCCCGGCCCGGCCACACCATGGAGCAGGA...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GGCTGCGTGGTGTTGAGCCATACGCCGGGGTTCTTCTCCACGGCGGCCGAGAGCGACAGAGCGAGACTCTaGCGCGGCTGGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: GCVVLSHTPGFFSTAAESDRARL*RGWSTA
Trigger: GGCGGTGGACCAGCCGCGCCAGAGTCTCGCTCTGTC...GCTCTCGGCCGCCGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR TCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCTCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPSAGRS*PCCWGG
Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp AGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCAAGGGGCTGCGTGGTGTTaGGCCATACGCCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SKPWRRAAGHLLAALQSQGAAWC*AIRRGS
Trigger: AGAACCCCGGCGTATGGCTCAACACCACGCAGCCCC...TTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp GCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGCCTCGTCGGTCACCATaGAGGCTTTGCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AVSKPWRRAAGHLLAALQPRRSP*RLCTGA
Trigger: AGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGG...CTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGCTCTTCCTGCTTCCTaGTGTCCTCGTCGGTCACCA +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRALPAS*CPRRSP
Trigger: TGGTGACCGACGAGGACATCAGGAAGCAGGAAGAGC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR TCA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGCCACGATCCCTAGGCTaGGCCAGCGGCACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWPRSLG*ASGTSG
Trigger: CCCTGAGGTGCCGCTGGCTCAGCCTAGGGATCGTGG...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCCCACGATCCCTAGGCTaGGCCAGCGGCACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSPRSLG*ASGTSG
Trigger: CCCTGAGGTGCCGCTGGCTCAGCCTAGGGATCGTGG...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCACGGGATCAGAGGGACTaGTCGGGGTCTGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSRDQRD*SGSVSD
Trigger: GTCACTGACAGACCCCGATCAGTCCCTCTGATCCCG...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCCCAGGGCAGGGAATTTaGCGAGGGCCTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVPGQGI*RGPEHW
Trigger: CCAGTGCTCAGGCCCTCGTCAAATTCCCTGCCCTGG...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCAGGGCAGGCTGGTCATaGGGCCCCCACGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGRAGWS*GPHERS
Trigger: GGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCT...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCGGCTACTCGGGAGGCTaGGGCTTGAACCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPGYSGG*GLNPEG
Trigger: ACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCC...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGACCCCAACACGGCCCTaGCCCCAAACCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRTPTRP*PQTQAG
Trigger: GCCTGCCTGGGTTTGGGGTCAGGGCCGTGTTGGGGT...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR GCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRPAAAC*GTSSRS
Trigger: CGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGG...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHAPAAA*CGTSSR
Trigger: GCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERGMVLV*RALAMA
Trigger: GGCCATCGCCAGCGCCCTGCACACTAGCACCATGCC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGAGCCGCTTCCGCACCTaGTGCACCAGCTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQSRFRT*CTSSSC
Trigger: GCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCGGCT...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTGCAGCCCCAGCTGTGTaGCCCGAGGCCCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSAAPAV*PEAPGS
Trigger: ACTTCCCGGGGCCTCGGGGCACACAGCTGGGGCTGC...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQRAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVRAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGTCCCGTCCTCACGCTaGACAGTGGGTGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRVPSSR*TVGDVS
Trigger: ACTCACATCACCCACTGTGCAGCGTGAGGACGGGAC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVAHREG*PMTCLD
Trigger: GTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGC...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTAAGCTGCCAGCCCACTaGCTCCATGCGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAKLPAH*LHAGPW
Trigger: CCAAGGACCCGCATGGAGGCAGTGGGCTGGCAGCTT...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGAAGCTGCCAGCCCACTaGCTCCATGCGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQKLPAH*LHAGPW
Trigger: CCAAGGACCCGCATGGAGGCAGTGGGCTGGCAGCTT...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCCAGAAGGTGGAGGTTaGAGTGAGCCCAGATCACGC +
Preference number: 4 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGPEGGG*SEPRSR
Trigger: GCGTGATCTGGGCTCACTGCAACCTCCACCTTCTGG...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAAAGTGCCAGAAGGGCTaGCATGGTGGTTCACACCTG +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPKCQKG*HGGSHL
Trigger: CAGGTGTGAACCACCATGGCAGCCCTTCTGGCACTT...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCACAGAAAGCTGAGTCTTaGTCCGGTATGGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPQKAES*SGMALS
Trigger: GGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTG...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGCCTCTTCCGCTCCATTaGGCCCGGCTCCTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGPLPLH*ARLLGP
Trigger: CGGGCCGAGGAGCCGGGCGCAATGGAGCGGAAGAGG...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR CCA 90 bp AGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCAAAGGTGCTCAGGTCCATaGAGCCGCCCAGGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: SKPWRRAAGHLLAALQSQRCSGP*SRPGSA
Trigger: CGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCT...TTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTCTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPLRRRA*FTWGRG
Trigger: TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAG...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGGTGTCTCCAAGGCTaGGCTTCGCCGCCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWGCLQG*ASPPSL
Trigger: CAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCC...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTaGGGGCAGCCCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERGGSFG*GQPQLC
Trigger: ACACAGCTGGGGCTGCCCCCACCCGAAAGACCCTCC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AVSKPWRRAAGHLLAALQCRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...CTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTCTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVALPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACTGTCCCAGTGGCTCCTaGCACCCCTGGGAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHCPSGS*HPWERQ
Trigger: CTGACGCTCCCAGGGGTGCCAGGAGCCACTGGGACA...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCTGTCCCAGTGGCTCCTaGCACCCCTGGGAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVCPSGS*HPWERQ
Trigger: CTGACGCTCCCAGGGGTGCCAGGAGCCACTGGGACA...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCAGCTCCCTGGAGAGCTaGGCACCTCGAGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRSSLES*APRGAS
Trigger: AGACGCTCCTCGAGGTGCCCAGCTCTCCAGGGAGCT...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTCCCTCAGACGGCCTTaGGCCAGAAGCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVASLRRP*ARSSLE
Trigger: CTCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGA...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCCAGGCGTCTGTGGCTTaGAACCTGCCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVQASVA*NLPSPR
Trigger: CCTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTG...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCTTGGAGGGCAGACGGTaGAGCGGCGCTTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPLEGRR*SGASSA
Trigger: AGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAA...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGCCCCATGCCAGGTCTaGGTTCTGGGGCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGAPCQV*VLGLEC
Trigger: ACACTCCAGCCCCAGAACCCAGACCTGGCATGGGGC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCCTGGGGGCAGCCAAGTaGCCTTTGAGGATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPLGAAK*PLRMGP
Trigger: TGGCCCCATCCTCAAAGGCCACTTGGCTGCCCCCAG...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTCCCTGGTACCCTCTGTaGCGGCAGCGGTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPPWYPL*RQRWGA
Trigger: AGCTCCCCACCGCTGCCGCCACAGAGGGTACCAGGG...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGTGTGGTCCGTGTGGCTaGGCCGAGGGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPPGCLQGWASPPSLVHVCGPCG*AEGWEV
Trigger: CACCTCCCAGCCCTCGGCCCAGCCACACGGACCACA...CACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACTCCTGCTCCATGGTGTaGCCGGGCCGGGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHSCSMV*PGRAVF
Trigger: GAACACAGCCCGGCCCGGCCACACCATGGAGCAGGA...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCACAGCCCCGACCTTCTaGGCACTTCTTCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVTAPTF*ALLPSP
Trigger: GGGAGAGGGAAGAAGTGCCCAGAAGGTCGGGGCTGT...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR TCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCGGTCGGGCTTGCCCTTaGCCTGGTTGGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVGRACP*PGWRSR
Trigger: ACGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACC...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVSAGRS*PCCWGG
Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CCGGGGTTCTTCTCCACGGCGGCCGAGAGCTGTCCCGTGATGGGCATGGTGCTAGGGGCTGCGTGGTGTTaGGCCATACGCCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PGFFSTAAESCPVMGMVLGAAWC*AIRRGS
Trigger: AGAACCCCGGCGTATGGCTCAACACCACGCAGCCCC...TAGCACCATGCCCATCACGGGACAGCTCTCGGCCGCCGTGGAGAAGAACCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR TCA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGGGCTGCGTGGTGTTaGGCCATACGCCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWGAAWC*AIRRGS
Trigger: AGAACCCCGGCGTATGGCTCAACACCACGCAGCCCC...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCCCTCGTCGGTCACCATaGAGGCTTTGCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVPRRSP*RLCTGA
Trigger: AGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGG...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQGKAAR*RASTVL
Trigger: TAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCTGCCCTGGCCCTTaGGCCCGTCCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWGCPGP*ARPEDL
Trigger: CAAATCCTCAGGACGGGCTCAAGGGCCAGGGCAGCC...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTGAGGCGGGGGACACGTaGGGCTCTTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSEAGDT*GSCCCW
Trigger: CCAGCAGCAGCAAGAGCCTCACGTGTCCCCCGCCTC...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCCTTAGCTGGTGTTGCTaGGACTCGGGAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVLSWCC*DSGALW
Trigger: CCACAGGGCTCCCGAGTCTCAGCAACACCAGCTAAG...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCAGGCAGAGCTTGCAGTaGGCAGAGATCACACCATTG +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALRQSLQ*AEITPL
Trigger: CAATGGTGTGATCTCTGCTCACTGCAAGCTCTGCCT...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERPAAAC*GTSSRS
Trigger: CGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGG...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGGCAGCGTCTCATCCGTaGAGCCAGGTCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRAASHP*SQVPPP
Trigger: AGGGGGTGGGACCTGGCTGCACGGATGAGACGCTGC...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CTTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGCCAGCTCCTCCACGTaGGCCAGCATGTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LPPGCLQGWASPPSLVHVASSST*ASMSAI
Trigger: GATGGCCGACATGCTGGCGCACGTGGAGGAGCTGGC...CACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGAGTGTGGAGCCTCGGTaGGCCCAGGGGGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWSVEPR*AQGVQP
Trigger: AGGCTGAACCCCCTGGGCGCACCGAGGCTCCACACT...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGCCGAGGGCTGGGAGGTaGATCCTCGCCACGGGGGTC +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLPRAGR*ILATGV
Trigger: GACCCCCGTGGCGAGGATGCACCTCCCAGCCCTCGG...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGAATCTCACAGGCAGTaGCCAGCCACCCGCTACCAG +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGESHRQ*PATRYQ
Trigger: CTGGTAGCGGGTGGCTGGGCACTGCCTGTGAGATTC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCAGGTGCTCAGGTCCATaGAGCCGCCCAGGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSRCSGP*SRPGSA
Trigger: CGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCT...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGAGGTGCTCAGGTCCATaGAGCCGCCCAGGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRRCSGP*SRPGSA
Trigger: CGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCT...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGAAGAGCTGGCGCGGCTaGTCCACCGCCTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWKSWRG*STAFCG
Trigger: CCCGCAGAAGGCGGTGGACCAGCCGCGCCAGCTCTT...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGAAGAGCTGGCGCGGCTaGTCCACCGCCTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGKSWRG*STAFCG
Trigger: CCCGCAGAAGGCGGTGGACCAGCCGCGCCAGCTCTT...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGCGAGCCTGGTTCACGTaGGGCCGAGGACCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGRAWFT*GRGPRL
Trigger: CAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCG...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVCRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCACCACCAGCCGCATaGCAGGGCAGAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRAPPAA*QGREWR
Trigger: GCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQRPSPD*QRLEFG
Trigger: ACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCG...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTAGCTCCCTGGAGAGCTaGGCACCTCGAGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERSSLES*APRGAS
Trigger: AGACGCTCCTCGAGGTGCCCAGCTCTCCAGGGAGCT...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGCGGGGCAGGCGTCTGTaGCTTGGAACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALRGRRL*LGTCPR
Trigger: GCGAGGGCAGGTTCCAAGCCACAGACGCCTGCCCCG...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRRPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGGCAGCGACCAGATCCTaGCTGGGGCAGCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGAATRS*LGQHRD
Trigger: GTCCCGGTGCTGCCCCAGCCAGGATCTGGTCGCTGC...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCTTGGAGGGCAGACGGTaGAGCGGCGCTTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPALEGRR*SGASSA
Trigger: AGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAA...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCACCAAGGCCAGGACATaGCCAGAACCCCGGGATCAG +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRTKART*PEPRDQ
Trigger: CTGATCCCGGGGTTCTGGCCATGTCCTGGCCTTGGT...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCAATCTGGGTTCTGGGGCTaGAGTGTGGAGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SKPWRRAAGHLLAALQSQSGFWG*SVEPRC
Trigger: GCACCGAGGCTCCACACTCCAGCCCCAGAACCCAGA...TTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCTGGGGGCAGCCAAGTaGCCTTTGAGGATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVLGAAK*PLRMGP
Trigger: TGGCCCCATCCTCAAAGGCCACTTGGCTGCCCCCAG...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGCCAGAAGGGCTGCCATaGTGGTTCACACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRPEGLP*WFTPVI
Trigger: GATTACAGGTGTGAACCACCATGGCAGCCCTTCTGG...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGCCGGTGTCAGAGCCTaGTTCCTGTTCATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAAGVRA*FLFMAE
Trigger: CTCGGCCATGAACAGGAACCAGGCTCTGACACCGGC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGGCCACTCAGGCACGGTaGGGCTCTGTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWATQAR*GSVAPP
Trigger: TGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGC...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVGKAAR*RASTVL
Trigger: TAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCC...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGGCTGCCCTGGCCCTTaGGCCCGTCCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRGCPGP*ARPEDL
Trigger: CAAATCCTCAGGACGGGCTCAAGGGCCAGGGCAGCC...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGTTCAGCCTGAGGGTCTaGGACTTTTCCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQFSLRV*DFSRAG
Trigger: CCCTGCCCTGGAAAAGTCTCAGACCCTCAGGCTGAA...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGGCTACTCGGGAGGCTaGGGCTTGAACCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAGYSGG*GLNPEG
Trigger: ACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGTCGCCACGGGGGTCCTaGGCCTCTCCTCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLSPRGS*ASPPWY
Trigger: GTACCAGGGAGGAGAGGCTCAGGACCCCCGTGGCGA...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGTGGCAGGAGAGGCATaGTGCCCCTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQVAGEA*CPLAGV
Trigger: AACACCAGCTAAGGGGCATCATGCCTCTCCTGCCAC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACCTGTGTGTCTCTTGCTaGGGGTGGACTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHLCVSC*GWTPPG
Trigger: CCCTGGAGGAGTCCACCCTCAGCAAGAGACACACAG...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGAGAATGGCGTaGACCCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERGGRMA*TQEAEL
Trigger: AAGCTCTGCCTCCTGGGTTCACGCCATTCTCCCTCC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGGAGGGAGAATGGCGTaGACCCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAGGRMA*TQEAEL
Trigger: AAGCTCTGCCTCCTGGGTTCACGCCATTCTCCCTCC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGAGGTCAGGAGTTCGTaGCCAGCCTGGCTAACATGG +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAEVRSS*PAWLTW
Trigger: CCATGTTAGCCAGGCTGGTCACGAACTCCTGACCTC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCATCAGCATCTTGCCCGTaGGGAAGTCGAAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSSASCP*GSRRCS
Trigger: TGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGA...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCTGCTCATCAGCATCTTaGCCGTGCGGAAGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPCSSAS*PCGSRR
Trigger: CCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCA...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCTGCTCATCAGCATCTTaGCCGTGCGGAAGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALCSSAS*PCGSRR
Trigger: CCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCA...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCATCTTGGTCACCGGCTaGTTGAAGATGGACGCCGTC +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPILVTG*LKMDAV
Trigger: GACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGAT...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGATCTTGGTCACCGGCTaGTTGAAGATGGACGCCGTC +
Preference number: 4 (lower is better)
Translates to: GSLEGRRWSGASSAPAVRILVTG*LKMDAV
Trigger: GACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGAT...CCTGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAATCTTGGTCACCGGCTaGTTGAAGATGGACGCCGTC +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSILVTG*LKMDAV
Trigger: GACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGAT...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSGMVLV*RALAMA
Trigger: GGCCATCGCCAGCGCCCTGCACACTAGCACCATGCC...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACG +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQALHRG*VVLSHT
Trigger: CGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACG +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGALHRG*VVLSHT
Trigger: CGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCTGCACCAGCTCTTCCTaGTTCCTGATGTCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVCTSSS*FLMSSS
Trigger: CGACGAGGACATCAGGAAGCAGGAAGAGCTGGTGCA...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR GCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCATGCACCAGCTCTTCCTaGTTCCTGATGTCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSCTSSS*FLMSSS
Trigger: CGACGAGGACATCAGGAAGCAGGAAGAGCTGGTGCA...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR GCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACCGCTTCCGCACCTGCTaGACCAGCTCTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHRFRTC*TSSSCF
Trigger: GAAGCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCG...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR GCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCAGCAAAGGCCAGTATTaGCTTGGCCTGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVSKGQY*LGLWGS
Trigger: GGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCT...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAAGTGCCAGAAGGGCTaGCATGGTGGTTCACACCTG +
Preference number: 4 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVKCQKG*HGGSHL
Trigger: CAGGTGTGAACCACCATGGCAGCCCTTCTGGCACTT...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCCCAGGAGGCAGAGCTTaGAGTGAGCAGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPPGGRA*SEQRSH
Trigger: GTGTGATCTCTGCTCACTGCAAGCTCTGCCTCCTGG...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCAAGAGCTGGCGCGGCTaGTCCACCGCCTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFKSWRG*STAFCG
Trigger: CCCGCAGAAGGCGGTGGACCAGCCGCGCCAGCTCTT...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGTTCTCCCAGAAGAGCTaGCGCGGCTGGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWFSQKS*RGWSTA
Trigger: GGCGGTGGACCAGCCGCGCCAGCTCTTCTGGGAGAA...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACTGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHCRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCATTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AGPWRADGGAALPQLPRSFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...TGACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGCCGACTGGCAGCGGCTaGAGTTTGGTTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGCLQGWASPPSLVHVGPPTGSG*SLVFRS
Trigger: GCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGG...CGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTCACCCTGTCCCAGTaGCTCCTGGCACCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRLTLSQ*LLAPLG
Trigger: TCCCAGGGGTGCCAGGAGCCACTGGGACAGGGTGAG...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCAGCTCCCTGGAGAGCTaGGCACCTCGAGGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSSSLES*APRGAS
Trigger: AGACGCTCCTCGAGGTGCCCAGCTCTCCAGGGAGCT...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGCAGGCGTCTGTGGCTTaGAACCTGCCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRQASVA*NLPSPR
Trigger: CCTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTG...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCCGGGGCAGGCGTCTGTaGCTTGGAACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RQCPATRYQKAESCSGMARGRRL*LGTCPR
Trigger: GCGAGGGCAGGTTCCAAGCCACAGACGCCTGCCCCG...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACAGGCCCCATCAGGGATaGTCACAGTCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHRPHQG*SQSSHR
Trigger: CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCT...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCACAGAAGCTCAAACGTaGGCACCAAAGTCTAGCGGA +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALTEAQT*APKSSG
Trigger: TCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGT...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCTCAGTGACAGGAAGCTaGGCTGCGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SMRVLGGQTVERRFLSSRSVTGS*AATERE
Trigger: CTCCCTCTCTGTCGCAGCCCAGCTTCCTGTCACTGA...GCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGTCTGGGTTCTGGGGCTaGAGTGTGGAGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRSGFWG*SVEPRC
Trigger: GCACCGAGGCTCCACACTCCAGCCCCAGAACCCAGA...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGGCCAGGTCTGGGTTCTaGGGCTGGAGTGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRARSGF*GWSVEP
Trigger: AGGCTCCACACTCCAGCCCCAGAACCCAGACCTGGC...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGAAAGATCCCAGCATTaGGAGCTCAGGCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPERSQH*ELRLPR
Trigger: GCGGGGAAGCCTGAGCTCCCAATGCTGGGATCTTTC...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCAGTACAAAGATTAGCTaGGTGTGGTGGCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGSTKIS*VWWRAP
Trigger: GGGCGCCCGCCACCACACCCAGCTAATCTTTGTACT...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCGAGATGGGAAGCTCTTaGGAGGCACCCGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVEMGSS*EAPVIP
Trigger: TGGGATGACGGGTGCCTCCCAAGAGCTTCCCATCTC...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR TCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGGGPWS*PAPQQC
Trigger: ACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGCTCTTCCTGCTTCCTaGTGTCCTCGTCGGTCACCA +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHALPAS*CPRRSP
Trigger: TGGTGACCGACGAGGACATCAGGAAGCAGGAAGAGC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR TCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGCCATGGCTAGTGAGCTaGAGTCCAGGGTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLPWLVS*SPGSRG
Trigger: GCCCCGGGACCCTGGACTTCAGCTCACTAGCCATGG...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCAGGTGGAGGTTGCAGTaGGCCCAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSRWRLQ*AQITPL
Trigger: CAGTGGCGTGATCTGGGCTCACTGCAACCTCCACCT...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCAAGTGGCAGGAGAGGCATaGTGCCCCTTAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SKPWRRAAGHLLAALQSQVAGEA*CPLAGV
Trigger: AACACCAGCTAAGGGGCATCATGCCTCTCCTGCCAC...TTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACCCGCTACCAGAAAGCTaGGTCTTGCTCCGGTATGGC +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHPLPES*VLLRYG
Trigger: GCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGG...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCCCCTGGATGGGCACTTaGCTTGTTTACACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGAEDRVCRRLQQAARALPWMGT*LVYTFW
Trigger: CCAAAAAGTGTAAACAAGTCAAGTGCCCATCCAGGG...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTACCCCAACCCTGGCGTaGCCCCAGACCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSTPTLA*PQTFIP
Trigger: TGGGATGAAGGTCTGGGGTCACGCCAGGGTTGGGGT...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR GCA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGATGCTCATCAGCATCTTaGCCGTGCGGAAGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGCSSAS*PCGSRR
Trigger: CCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCA...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CTCAGCGCAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACGGCTCTTGTTCATCTTaGTCATCAGCATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LSAGLVQRRLPVTGQLLHGSCSS*SSASCP
Trigger: CGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCC...GTGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR GCA 90 bp AGGACAGGGAGGGCTGGCTTTAGCGACTCCACGGGACGGGGACGCTTGGGCTCTTGGTCCACCGCCTTCTaGGGGTCGCTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: RTGRAGFSDSTGRGRLGSWSTAF*GSLLTL
Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCA...AGAGCCCAAGCGTCCCCGTCCCGTGGAGTCGCTAAAGCCAGCCCTCCCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR GCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTTGGTCCACCGCCTTCTaGGGGTCGCTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPWSTAF*GSLLTL
Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCA...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAAGCCGCTTCCGCACCTaGTGCACCAGCTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRSRFRT*CTSSSC
Trigger: GCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCGGCT...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AAGGCCAGTATTGCCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGAGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KASIALACGGPQGFRERGAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...TCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGCCGAGGACCGCGTCTaGAGGCGGCTCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRAEDRV*RRLQQA
Trigger: TGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGGCAGCCCCAGCTGTGTaGCCCGAGGCCCCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: EMGRGKQSVSECRADEGRAAPAV*PEAPGS
Trigger: ACTTCCCGGGGCCTCGGGGCACACAGCTGGGGCTGC...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGAAGCTGCCAGCCCACTaGCTCCATGCGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWKLPAH*LHAGPW
Trigger: CCAAGGACCCGCATGGAGGCAGTGGGCTGGCAGCTT...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGCCCTTGCCCACAGATaGCCAGGCCGGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFALAHR*PGRPGL
Trigger: AAGACCAGGCCGGCCTGGGCATCTGTGGGCAAGGGC...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCGGGCTCCTGGAGATTTaGTGTGACAGCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVGLLEI*CDSHEG
Trigger: TCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCC...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCTCCTCCAGGGGCATCTaGGCCGTGGCCGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFSSRGI*AVAGVR
Trigger: TCTGACACCGGCCACGGCGCAGATGCCCCTGGAGGA...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGACCTTGTTGCTGGGGTaGTTGGTAATCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGTLLLG*LVILVT
Trigger: GGTGACCAAGATTACCAACCACCCCAGCAACAAGGT...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACACTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTLRRRA*FTWGRG
Trigger: TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAG...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGGCACGGCCTTCCTCCTaGGTGTCTCCAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLARPSS*VSPRLG
Trigger: GCCCAGCCTTGGAGACACCCAGGAGGAAGGCCGTGC...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATGGCAGGGCAGAGAGTaGCGCCGTCCTGCATGCCCC +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTWQGRE*RRPACP
Trigger: GGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCA...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTACCTCGAGGAGCGTCTaGGAGCCTCACCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSTSRSV*EPHPVP
Trigger: TGGGACAGGGTGAGGCTCCCAGACGCTCCTCGAGGT...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGCAGGCGTCTGTGGCTTaGAACCTGCCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGQASVA*NLPSPR
Trigger: CCTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTG...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGCGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGRPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGCAGCGACCAGATCCTaGCTGGGGCAGCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSEAATRS*LGQHRD
Trigger: GTCCCGGTGCTGCCCCAGCCAGGATCTGGTCGCTGC...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTAGGCCCCATCAGGGATaGTCACAGTCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPRPHQG*SQSSHR
Trigger: CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCT...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTGGGGGTGTTTTCCATaGGCACCTCCGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSWGCFP*APPGSW
Trigger: CCAGGAGCCCGGAGGTGCCCATGGAAAACACCCCCA...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACCGAGTCCTGCTCCATaGTGTGGCCGGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTPSPAP*CGRAGL
Trigger: CAGCCCGGCCCGGCCACACCATGGAGCAGGACTCGG...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CAA 72 bp CCCACCCCCTGCAGGCCCTTGGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATGTCGAAGGCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTPCRPLGRSMV*TSSSAMSKAFR
Trigger: CCTGAACGCCTTCGACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCCCAAGGGCCTGCAGGGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR TCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGTCGGGCTTGCCCTTaGCCTGGTTGGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFGRACP*PGWRSR
Trigger: ACGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACC...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp AGGGGCTGCGTGGTGTTGAGCCATACGCCGGGGTTCTTCTCCACGGCGGCCGAGGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: RGCVVLSHTPGFFSTAAEGGPWS*PAPQQC
Trigger: ACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCC...CTCGGCCGCCGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR TCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGGCCACTCAGGCACGGTaGGGCTCTGTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGATQAR*GSVAPP
Trigger: TGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGC...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGAGAAGGTCTTGGGGCTaGGACATGGGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGLLEICCDSHEGHTQARRRSWG*DMGGAG
Trigger: CCCAGCCCCGCCCATGTCTCAGCCCCAAGACCTTCT...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTAGGTGGAGGTTGCAGTaGGCCCAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSRWRLQ*AQITPL
Trigger: CAGTGGCGTGATCTGGGCTCACTGCAACCTCCACCT...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGACGGGAGGCTGAGGCTTaGACCCAGAAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRREAEA*TQKVEV
Trigger: AACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCG...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGCTTAGCTGGTGTTGCTaGGACTCGGGAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWLSWCC*DSGALW
Trigger: CCACAGGGCTCCCGAGTCTCAGCAACACCAGCTAAG...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCACTTTTTGGACCCCTTaGATCTGGAGCGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALTFWTP*IWSECD
Trigger: GTCACACTCGCTCCAGATTCAAGGGGTCCAAAAAGT...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCAGGCAGAGCTTGCAGTaGGCAGAGATCACACCATTG +
Preference number: 4 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVRQSLQ*AEITPL
Trigger: CAATGGTGTGATCTCTGCTCACTGCAAGCTCTGCCT...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGGAAATATCTTCAAATaGACGGCCGTGAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRGNIFK*TAVSVV
Trigger: AACCACGCTCACGGCCGTTCATTTGAAGATATTTCC...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GGCGCTGGCGATGGCCGACAGCAGCGTCTCATCCGTGCAGCCAGGTCCCACCCCTCACTTGAACCCAGTTaGAACCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GAGDGRQQRLIRAARSHPSLEPS*NQEAEV
Trigger: AACCTCTGCCTCCTGGTTTCAACTGGGTTCAAGTGA...GGGGTGGGACCTGGCTGCACGGATGAGACGCTGCTGTCGGCCATCGCCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR GCA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCGGCTCTTGTTCATCTTaGTCATCAGCATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALGSCSS*SSASCP
Trigger: CGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCC...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCATCTTGGTCACCGGCTaGTTGAAGATGGACGCCGTC +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAILVTG*LKMDAV
Trigger: GACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGAT...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGATGGTCCACCGCCTTCTaGGGGTCGCTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRWSTAF*GSLLTL
Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCA...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGTCTTGACCAGCTCCTCAGCAATGTCGAAGGCGTTCAGGCCGCTCAGCTTCTTCCAGGTCCCACCCCCTaGAGGCCCTTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLDQLLSNVEGVQAAQLLPGPTP*RPLGRS
Trigger: GGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGG...AAGAAGCTGAGCGGCCTGAACGCCTTCGACATTGCTGAGGAGCTGGTCAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR GCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACAGCAGCGTCTCATCCGTaGAGCCAGGTCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTAASHP*SQVPPP
Trigger: AGGGGGTGGGACCTGGCTGCACGGATGAGACGCTGC...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: SGLLEICCDSHEGHTQARGMVLV*RALAMA
Trigger: GGCCATCGCCAGCGCCCTGCACACTAGCACCATGCC...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTELPGT*WLLSSL
Trigger: GAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTC...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACAGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTELPGT*WLLSSL
Trigger: GAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTC...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGGACAGGGAGGGCTGGCTTTAGCGACTCCACGGGACGGGGACGCTTGGGCTCTGTCCCGTCCTCACGCTaGACAGTGGGTGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: RTGRAGFSDSTGRGRLGSVPSSR*TVGDVS
Trigger: ACTCACATCACCCACTGTGCAGCGTGAGGACGGGAC...AGAGCCCAAGCGTCCCCGTCCCGTGGAGTCGCTAAAGCCAGCCCTCCCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR GCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGCGGCCTCCTGGGCATaGCACTCAGGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTAASWA*HSGTVR
Trigger: CCTCACCGTGCCTGAGTGGCATGCCCAGGAGGCCGC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTCGAGGTTGGGGGACCTaGTGGCCCTGTCCCCACACC +
Preference number: 4 (lower is better)
Translates to: TPKPDSWVVNVREVGGPARGWGT*WPCPHT
Trigger: GGTGTGGGGACAGGGCCAGCAGGTCCCCCAACCTCG...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGCGAGGTTGGGGGACCTaGTGGCCCTGTCCCCACACC +
Preference number: 4 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWRGWGT*WPCPHT
Trigger: GGTGTGGGGACAGGGCCAGCAGGTCCCCCAACCTCG...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGGGCTTCCCCGCCCCATaGCAGGTCTGGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVGFPAP*QVWVLG
Trigger: CCCCAGAACCCAGACCTGGCATGGGGCGGGGAAGCC...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGCGGTGGCGAGTGTGTaGGGTGGTCAGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFAVASV*GGQKGC
Trigger: ACAGCCCTTCTGACCACCGCACACACTCGCCACCGC...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCCCAGGAGGCAGAGCTTaGAGTGAGCAGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPAPGGRA*SEQRSH
Trigger: GTGTGATCTCTGCTCACTGCAAGCTCTGCCTCCTGG...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GTCATCCCAAGCACATCTGTGTTCACCAGGCAGTCCCCACTGCCAGGACCCGACGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: VIPSTSVFTRQSPLPGPDGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...GTCGGGTCCTGGCAGTGGGGACTGCCTGGTGAACACAGATGTGCTTGGGATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGGCTGTCAGCAAGCCGTaGCGCCGAGCTGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGAVSKP*RRAAGH
Trigger: GTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACATGGCAGGGCAGAGAGTaGCGCCGTCCTGCATGCCCC +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTWQGRE*RRPACP
Trigger: GGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCA...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGCAGCGGCTGGAGTTTaGTTTTCAGAAGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAAAAGV*FSEAKA
Trigger: AGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTCCGACTGGCAGCGGCTaGAGTTTGGTTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERPTGSG*SLVFRS
Trigger: GCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGG...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCTCCTGGCACCCCTaGGAGCGTCAGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVGSWHP*ERQHHP
Trigger: GGGGTGGTGCTGACGCTCCCAGGGGTGCCAGGAGCC...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGTCCCAGTGGCTCCTaGCACCCCTGGGAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTCPSGS*HPWERQ
Trigger: CTGACGCTCCCAGGGGTGCCAGGAGCCACTGGGACA...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGAGGGCACCAGGGACTaGCCGCAGAGTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTEGTRD*PQSPLG
Trigger: CCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTAGGCCCCATCAGGGATaGTCACAGTCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSRPHQG*SQSSHR
Trigger: CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCT...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GTCATCCCAAGCACATCTGTGTTCACCAGGCAGTCCCCACTGCCAGGACCCGACCTCCATGCGGGTCCTTaGAGGGCAGACGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: VIPSTSVFTRQSPLPGPDLHAGP*RADGGA
Trigger: CGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAG...GTCGGGTCCTGGCAGTGGGGACTGCCTGGTGAACACAGATGTGCTTGGGATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGCTCCATGCGGGTCCTTaGAGGGCAGACGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTLHAGP*RADGGA
Trigger: CGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAG...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTATGCCCAGGCCGGCCTaGTCTTCTCTGAATACCCCT +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPMPRPA*SSLNTP
Trigger: AGGGGTATTCAGAGAAGACCAGGCCGGCCTGGGCAT...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTCTGCTTCCCTTCCTTTaGAAGGAGCGGTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPLLPFL*KERCWV
Trigger: GACCCAGCACCGCTCCTTCCAAAGGAAGGGAAGCAG...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGGGCTCTTGCTGCTGCTaGCAAGTGCCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGGSCCC*QVPEGL
Trigger: CAGCCCTTCTGGCACTTGCCAGCAGCAGCAAGAGCC...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTCTGTGGCGGCAGCGGTaGGGAGCTTGGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TPKPDSWVVNVREVGGPALWRQR*GAWSEG
Trigger: CCCCTCAGACCAAGCTCCCCACCGCTGCCGCCACAG...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCCGGGGATCTTTGCGGTaGCGAGTGTGTGCGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFRGSLR*RVCAVV
Trigger: GACCACCGCACACACTCGCCACCGCAAAGATCCCCG...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCTGGTGTTGCTGAGACTCGGGAGCCCTGTGGTCCGTGTGGCTGGGCCGAGGGCAGTCTTGCTCCGGTATaGCCCTGTCCGAAAGAACGT +
Preference number: 4 (lower is better)
Translates to: AGVAETREPCGPCGWAEGSLAPV*PCPKER
Trigger: ACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACT...GCCCTCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTCTCAGCAACACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GGCCTCCCAGCCTTCAGGTCCAGAAAGCAGCTTCCAGTGGCCATGGCTAGTGAGTGGTCACCGGCTGCTTaGAGATGGACGCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLPAFRSRKQLPVAMASEWSPAA*RWTPSG
Trigger: GCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCA...CTCACTAGCCATGGCCACTGGAAGCTGCTTTCTGGACCTGAAGGCTGGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTGGGGCTGCGTGGTGTTaGGCCATACGCCGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TPKPDSWVVNVREVGGPAGAAWC*AIRRGS
Trigger: AGAACCCCGGCGTATGGCTCAACACCACGCAGCCCC...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACCTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTGGCTGCCCTGGCCCTTaGGCCCGTCCTGAGGATTTG +
Preference number: 4 (lower is better)
Translates to: TPKPDSWVVNVREVGGPAGCPGP*ARPEDL
Trigger: CAAATCCTCAGGACGGGCTCAAGGGCCAGGGCAGCC...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGCCAGGGCAGGGAATTTaGCGAGGGCCTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGPGQGI*RGPEHW
Trigger: CCAGTGCTCAGGCCCTCGTCAAATTCCCTGCCCTGG...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGTTCAGCCTGAGGGTCTaGGACTTTTCCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALFSLRV*DFSRAG
Trigger: CCCTGCCCTGGAAAAGTCTCAGACCCTCAGGCTGAA...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGACTGGCCAACATGGTaGAACCCTGTCTCTATTAAA +
Preference number: 4 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQDWPTW*NPVSIK
Trigger: TTTAATAGAGACAGGGTTTCACCATGTTGGCCAGTC...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGTCAGCATCTTGCCCGTaGGGAAGTCGAAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWSASCP*GSRRCS
Trigger: TGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGA...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRGMVLV*RALAMA
Trigger: GGCCATCGCCAGCGCCCTGCACACTAGCACCATGCC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGCGGGCACCTGCTGGCTaGTCTCCAGTCTCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTRAPAG*SPVSRS
Trigger: GCTCCTTGAGACTGGAGAGCAGCCAGCAGGTGCCCG...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCCTTCAGGTCCAGAAAGCAGCTTCCAGTGGCCATGGCTAGTGAGGGCTGGCCCCTCAGGTaGCCACGCCTACAACTCACT +
Preference number: 4 (lower is better)
Translates to: GLPAFRSRKQLPVAMASEGWPLR*PRLQLT
Trigger: AGTGAGTTGTAGGCGTGGGCACCTGAGGGGCCAGCC...CTCACTAGCCATGGCCACTGGAAGCTGCTTTCTGGACCTGAAGGCTGGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCAAGTGTGGAGCCTCGGTaGGCCCAGGGGGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LKRGHQSLADAPNSRLQASVEPR*AQGVQP
Trigger: AGGCTGAACCCCCTGGGCGCACCGAGGCTCCACACT...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGAGGTGCTCAGGTCCATaGAGCCGCCCAGGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVRCSGP*SRPGSA
Trigger: CGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCT...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTACCTTGTTGCTGGGGTaGTTGGTAATCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: RRAPGTGRRVHSGQASVATLLLG*LVILVT
Trigger: GGTGACCAAGATTACCAACCACCCCAGCAACAAGGT...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCATTCTCCCAGAAGAGCTaGCGCGGCTGGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LKRGHQSLADAPNSRLQAFSQKS*RGWSTA
Trigger: GGCGGTGGACCAGCCGCGCCAGCTCTTCTGGGAGAA...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCTTCGCCGCCGAGCCTaGTTCACGTGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGLRRRA*FTWGRG
Trigger: TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAG...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAACTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSELPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGTTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGCAGCGGCTGGAGTTTaGTTTTCAGAAGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERAAAGV*FSEAKA
Trigger: AGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGC...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCGCAGCGGCTGGAGTTTaGTTTTCAGAAGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVAAAGV*FSEAKA
Trigger: AGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGC...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACTCACCCTGTCCCAGTaGCTCCTGGCACCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTLTLSQ*LLAPLG
Trigger: TCCCAGGGGTGCCAGGAGCCACTGGGACAGGGTGAG...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACACAGGCGTCTGTGGCTTaGAACCTGCCCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTQASVA*NLPSPR
Trigger: CCTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTG...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGATCAGTGACAGGAAGCTaGGCTGCGACAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRSVTGS*AATERE
Trigger: CTCCCTCTCTGTCGCAGCCCAGCTTCCTGTCACTGA...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCGGCTCTTGCTGCTGCTaGCAAGTGCCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQCPATRYQKAESCSGMAGSCCC*QVPEGL
Trigger: CAGCCCTTCTGGCACTTGCCAGCAGCAGCAAGAGCC...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGAACGTTCCGGAAGCTaGGGGTGTTTTCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LPPGCLQGWASPPSLVHVERSGS*GCFPWA
Trigger: TGCCCATGGAAAACACCCCCAGCTTCCGGAACGTTC...CACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGTAATCTCAGCTACTTaGGAGGCTGAGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQVISAT*EAEEGE
Trigger: TTCTCCCTCCTCAGCCTCCCAAGTAGCTGAGATTAC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTTGACCAGCTCCTCAGCAATGTCGAAGGCGTTCAGGCCGCTCAGCTTCTTCTCAGACTCTGGCGCGGCTaGTCCACCGCCTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LDQLLSNVEGVQAAQLLLRLWRG*STAFCG
Trigger: CCCGCAGAAGGCGGTGGACCAGCCGCGCCAGAGTCT...GAGAAGAAGCTGAGCGGCCTGAACGCCTTCGACATTGCTGAGGAGCTGGTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585903.1
3UTR CAA 72 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWS*VFRSEGWRWHT
Trigger: TGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CAA 72 bp ATGGGATTGCACGCCGTGTCGGTGTCTGTGTGTCTCTaGCTGAGGGTGGACTCCTCCAGGGGCATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: MGLHAVSVSVCL*LRVDSSRGICA
Trigger: GGCGCAGATGCCCCTGGAGGAGTCCACCCTCAGCAAGAGACACACAGACACCGACACGGCGTGCAATCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGGTCGGGCTTGCCCTTaGCCTGGTTGGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTGRACP*PGWRSR
Trigger: ACGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACACCTCGTCGGTCACCATaGAGGCTTTGCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTPRRSP*RLCTGA
Trigger: AGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGG...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACAGGGAAGGCTGCCCGATaGCGTGCCTCGACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTGKAAR*RASTVL
Trigger: TAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCC...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTCAGCATCTTGCCCGTaGGGAAGTCGAAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: STRHFPKPDSVEDERGGSSASCP*GSRRCS
Trigger: TGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGA...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCCTTCAGGTCCAGAAAGCAGCTTCCAGTGGCCATGGCTAGTGAGTGGTCCACCGCCTTCTaGGGGTCGCTCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GLPAFRSRKQLPVAMASEWSTAF*GSLLTL
Trigger: CAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCA...CTCACTAGCCATGGCCACTGGAAGCTGCTTTCTGGACCTGAAGGCTGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCCCAGGTCCCACCCCCTaGAGGCCCTTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSPGPTP*RPLGRS
Trigger: GGACCTCCCCAAGGGCCTGCAGGGGGTGGGACCTGG...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CATGGTCTTGACCAGCTCCTCAGCAATGTCGAAGGCGTTCAGGCCGCTCAGCTTGGCATGGTGCTAGTGTaGAGGGCGCTGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: HGLDQLLSNVEGVQAAQLGMVLV*RALAMA
Trigger: GGCCATCGCCAGCGCCCTGCACACTAGCACCATGCC...AAGCTGAGCGGCCTGAACGCCTTCGACATTGCTGAGGAGCTGGTCAAGACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR GCA 90 bp GCTTTGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCGGGGTTCTTCTCCACGGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACG +
Preference number: 4 (lower is better)
Translates to: ALHRGCVVLSHTPGFFSTALHRG*VVLSHT
Trigger: CGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGC...CGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR GCA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACG +
Preference number: 4 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFALHRG*VVLSHT
Trigger: CGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGC...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGTGCACCAGCTCTTCCTaGTTCCTGATGTCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWCTSSS*FLMSSS
Trigger: CGACGAGGACATCAGGAAGCAGGAAGAGCTGGTGCA...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGGCCAGCTCCTCCACGTaGGCCAGCATGTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGASSST*ASMSAI
Trigger: GATGGCCGACATGCTGGCGCACGTGGAGGAGCTGGC...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGCCAGCTCCTCCACGTaGGCCAGCATGTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVASSST*ASMSAI
Trigger: GATGGCCGACATGCTGGCGCACGTGGAGGAGCTGGC...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGGCGGTGGCGAGTGTGTaGGGTGGTCAGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EMGRGKQSVSECRADEGRAVASV*GGQKGC
Trigger: ACAGCCCTTCTGACCACCGCACACACTCGCCACCGC...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAATGTAGAGGACGAGCGTaGAGGGTCTTTCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSECRGRA*RVFRVG
Trigger: CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACA...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGCCGACTGGCAGCGGCTaGAGTTTGGTTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALPTGSG*SLVFRS
Trigger: GCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGG...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGRPSPD*QRLEFG
Trigger: ACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCG...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGCGACCAAGTCCCGACTaGCAGCGGCTGGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTRPSPD*QRLEFG
Trigger: ACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCG...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGACCTCGAGGAGCGTCTaGGAGCCTCACCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVTSRSV*EPHPVP
Trigger: TGGGACAGGGTGAGGCTCCCAGACGCTCCTCGAGGT...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGTTGGAGGGCAGACGGTaGAGCGGCGCTTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVLEGRR*SGASSA
Trigger: AGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAA...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTCTCCATGCGGGTCCTTaGAGGGCAGACGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVLHAGP*RADGGA
Trigger: CGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAG...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGTATTGCCTTGGCCTGTaGGGGTCCCCAAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWYCLGL*GSPRFQ
Trigger: CTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATA...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGAGACATGGGCGGGGCTaGGGGCAGCCAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGRHGRG*GQPSGL
Trigger: AAGGCCACTTGGCTGCCCCCAGCCCCGCCCATGTCT...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTCACGGGCCCTGGGTGTaGCAGGAGAGGCATGATGCC +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVHGPWV*QERHDA
Trigger: GGCATCATGCCTCTCCTGCCACACCCAGGGCCCGTG...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGTGGGGGTGTTTTCCATaGGCACCTCCGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EMGRGKQSVSECRADEGRWGCFP*APPGSW
Trigger: CCAGGAGCCCGGAGGTGCCCATGGAAAACACCCCCA...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCTCGTTCATCCCTGGATaGGCACTTGACTTGTTTACA +
Preference number: 4 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGSFIPG*ALDLFT
Trigger: TGTAAACAAGTCAAGTGCCCATCCAGGGATGAACGA...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGTAATCTCAGCTACTTaGGAGGCTGAGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHVISAT*EAEEGE
Trigger: TTCTCCCTCCTCAGCCTCCCAAGTAGCTGAGATTAC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
3UTR CAA 72 bp CACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTaGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HRARPLAKASIA*ACGGPQGFRER
Trigger: TCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGTCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWSAGRS*PCCWGG
Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLGGPWS*PAPQQC
Trigger: ACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCC...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGGCTCTTCCTGCTTCCTaGTGTCCTCGTCGGTCACCA +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGALPAS*CPRRSP
Trigger: TGGTGACCGACGAGGACATCAGGAAGCAGGAAGAGC...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR TCA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHTLHSG*CEFQNY
Trigger: GTAGTTTTGAAACTCACATCACCCACTGTGCAGCGT...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGCTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGCTGACTCTTGGGTTGTaGATGTCCGCGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGLTLGL*MSARLG
Trigger: CCCCAACCTCGCGGACATTCACAACCCAAGAGTCAG...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAACTGACTCTTGGGTTGTaGATGTCCGCGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSELTLGL*MSARLG
Trigger: CCCCAACCTCGCGGACATTCACAACCCAAGAGTCAG...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGCGGGAGGCTGAGGCTTaGACCCAGAAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EMGRGKQSVSECRADEGRREAEA*TQKVEV
Trigger: AACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCG...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AAGGCCAGTATTGCCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGACTGTGTGTCTCTTGCTaGGGGTGGACTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KASIALACGGPQGFRERGLCVSC*GWTPPG
Trigger: CCCTGGAGGAGTCCACCCTCAGCAAGAGACACACAG...TCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACGCTTCCGCACCTGCTaGACCAGCTCTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTRFRTC*TSSSCF
Trigger: GAAGCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCG...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
CDS-3UTR GCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGCCAGGCAGCCCCTCCTaGTTCCCTTCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWPGSPS*FPSFGR
Trigger: CCTTCCAAAGGAAGGGAAGCAGGAGGGGCTGCCTGG...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCACAGAGTGTCTCTGAGTaGCGGGCAGATGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKRGHQSLADAPNSRLQAQSVSE*RADEGR
Trigger: CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTG...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCTGGCCCCTCAGGTaGCCACGCCTACAACTCACT +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVGWPLR*PRLQLT
Trigger: AGTGAGTTGTAGGCGTGGGCACCTGAGGGGCCAGCC...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGATCCCCGGGGATCTTTaGGGTGGCGAGTGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGIPGDL*GGECVR
Trigger: CCGCACACACTCGCCACCGCAAAGATCCCCGGGGAT...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCCCAGGCAGTCCCCACTaGCAGGACCCGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSPGSPH*QDPTPG
Trigger: CCCTGGAGTCGGGTCCTGGCAGTGGGGACTGCCTGG...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATAAGAGCTGGCGCGGCTaGTCCACCGCCTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHKSWRG*STAFCG
Trigger: CCCGCAGAAGGCGGTGGACCAGCCGCGCCAGCTCTT...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCGCTGTCAGCAAGCCGTaGCGCCGAGCTGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLAVSKP*RRAAGH
Trigger: GTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGGGCACCAGGGACTaGCCGCAGAGTCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGEGTRD*PQSPLG
Trigger: CCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCCGACCAGATCCTGGCTaGGGCAGCACCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSRPDPG*GSTGTG
Trigger: GCCTGTCCCGGTGCTGCCCCAGCCAGGATCTGGTCG...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGTTGGAGGGCAGACGGTaGAGCGGCGCTTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGLEGRR*SGASSA
Trigger: AGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAA...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACAATGCCCAGGCCGGCCTaGTCTTCTCTGAATACCCCT +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTMPRPA*SSLNTP
Trigger: AGGGGTATTCAGAGAAGACCAGGCCGGCCTGGGCAT...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGACCAAGGCCAGGACATaGCCAGAACCCCGGGATCAG +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVTKART*PEPRDQ
Trigger: CTGATCCCGGGGTTCTGGCCATGTCCTGGCCTTGGT...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGACCAGAAGGGCTGCCATaGTGGTTCACACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRPEGLP*WFTPVI
Trigger: GATTACAGGTGTGAACCACCATGGCAGCCCTTCTGG...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCGACTCGGGAGCCCTGTaGTCCGTGTGGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSDSGAL*SVWLGR
Trigger: TCGGCCCAGCCACACGGACCACAGGGCTCCCGAGTC...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGGCCGGTGTCAGAGCCTaGTTCCTGTTCATGGCCGAG +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVAGVRA*FLFMAE
Trigger: CTCGGCCATGAACAGGAACCAGGCTCTGACACCGGC...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTTCTCGGCAGGGCCTCTaGAAAGGACAGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVSRQGL*KGQGGL
Trigger: CAGCCCTCCCTGTCCTTTCCAGAGGCCCTGCCGAGA...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR TCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCGCCACTCAGGCACGGTaGGGCTCTGTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSATQAR*GSVAPP
Trigger: TGGTGGTGCCACAGAGCCTCACCGTGCCTGAGTGGC...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGGGCGTGGTGGCTACTCGGGAGGCTGAGGCTTGAACCCAGAAGGTGGAGGTTGCTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WAWWLLGRLRLEPRRWRLLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...CAACCTCCACCTTCTGGGTTCAAGCCTCAGCCTCCCGAGTAGCCACCACGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCGACTGGCCAACATGGTaGAACCCTGTCTCTATTAAA +
Preference number: 4 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPADWPTW*NPVSIK
Trigger: TTTAATAGAGACAGGGTTTCACCATGTTGGCCAGTC...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGCCCTGGATGGGCACTTaGCTTGTTTACACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRPWMGT*LVYTFW
Trigger: CCAAAAAGTGTAAACAAGTCAAGTGCCCATCCAGGG...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGTGCTCATCAGCATCTTaGCCGTGCGGAAGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGCSSAS*PCGSRR
Trigger: CCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCA...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGGGCTCTTGTTCATCTTaGTCATCAGCATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALGSCSS*SSASCP
Trigger: CGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCC...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCGCAGCGTCTCATCCGTaGAGCCAGGTCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSAASHP*SQVPPP
Trigger: AGGGGGTGGGACCTGGCTGCACGGATGAGACGCTGC...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGGTCCCGTCCTCACGCTaGACAGTGGGTGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWVPSSR*TVGDVS
Trigger: ACTCACATCACCCACTGTGCAGCGTGAGGACGGGAC...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGCACTCCAGCCTGTaGAACAAGAGCGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRLHSSL*NKSERR
Trigger: TCTTCTTTCGCTCTTGTTGCACAGGCTGGAGTGCAG...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTCCCAGATCACGCCACTaGACTCCAGCCTGTGCAACA +
Preference number: 4 (lower is better)
Translates to: TPKPDSWVVNVREVGGPAPRSRH*TPACAT
Trigger: TGTTGCACAGGCTGGAGTGCAGTGGCGTGATCTGGG...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGCCCAGATCACGCCACTaGACTCCAGCCTGTGCAACA +
Preference number: 4 (lower is better)
Translates to: EMGRGKQSVSECRADEGRPRSRH*TPACAT
Trigger: TGTTGCACAGGCTGGAGTGCAGTGGCGTGATCTGGG...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGGGGCTCCTGGAGATTTaGTGTGACAGCCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: SGLLEICCDSHEGHTQARGLLEI*CDSHEG
Trigger: TCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCC...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGACCTTGTTGCTGGGGTaGTTGGTAATCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGTLLLG*LVILVT
Trigger: GGTGACCAAGATTACCAACCACCCCAGCAACAAGGT...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGGAGGGTCTTTCGGGTaGGGGCAGCCCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGGGSFG*GQPQLC
Trigger: ACACAGCTGGGGCTGCCCCCACCCGAAAGACCCTCC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGGCATGGGGAGGAGCTaGCCTCGAGCCCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGGMGRS*PRAQRS
Trigger: CGACCTTTGGGCTCGAGGCCAGCTCCTCCCCATGCC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCGCACCACCAGCCGCATaGCAGGGCAGAGAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLAPPAA*QGREWR
Trigger: GCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGC...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTCAGAAGCGAAGGCTaGCGTTGGCACACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LALAHREGCPMTCLDCVTFRSEG*RWHTGK
Trigger: CTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAA...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCACGGGGCAGGCGTCTGTaGCTTGGAACCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPRGRRL*LGTCPR
Trigger: GCGAGGGCAGGTTCCAAGCCACAGACGCCTGCCCCG...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCCTCCATGCGGGTCCTTaGAGGGCAGACGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSLHAGP*RADGGA
Trigger: CGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAG...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGACAGAAGCTCAAACGTaGGCACCAAAGTCTAGCGGA +
Preference number: 4 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWTEAQT*APKSSG
Trigger: TCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGT...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCAGCCCAGGGCCTGGATaGGCTTCCAGTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLSPGPG*ASSGEG
Trigger: GCCCTCCCCACTGGAAGCCCATCCAGGCCCTGGGCT...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGAAAGATCCCAGCATTaGGAGCTCAGGCTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRERSQH*ELRLPR
Trigger: GCGGGGAAGCCTGAGCTCCCAATGCTGGGATCTTTC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATCACGGGCCCTGGGTGTaGCAGGAGAGGCATGATGCC +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHHGPWV*QERHDA
Trigger: GGCATCATGCCTCTCCTGCCACACCCAGGGCCCGTG...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGAGTACAAAGATTAGCTaGGTGTGGTGGCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVSTKIS*VWWRAP
Trigger: GGGCGCCCGCCACCACACCCAGCTAATCTTTGTACT...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRGGPWS*PAPQQC
Trigger: ACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp GGTTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGCTGTGTTACATTTACTaGAGGAGAGCGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFQKRRLALAHREGCPMTLCYIY*RRAASW
Trigger: CCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAG...CGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCAGAAGGTCTTGGGGCTaGGACATGGGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLRRSWG*DMGGAG
Trigger: CCCAGCCCCGCCCATGTCTCAGCCCCAAGACCTTCT...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAAGCCGCTTCCGCACCTaGTGCACCAGCTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGSRFRT*CTSSSC
Trigger: GCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCGGCT...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGAGCTGCCGGGCACCTaGTGGCTGCTCTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPELPGT*WLLSSL
Trigger: GAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTC...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAAAGCTGCCAGCCCACTaGCTCCATGCGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGKLPAH*LHAGPW
Trigger: CCAAGGACCCGCATGGAGGCAGTGGGCTGGCAGCTT...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGCAGAAAGCTGAGTCTTaGTCCGGTATGGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWQKAES*SGMALS
Trigger: GGACAGGGCCATACCGGAGCAAGACTCAGCTTTCTG...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGCAGAGATCACACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGQRSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGATCTCTG...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCTTCTCCCAGAAGAGCTaGCGCGGCTGGTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLFSQKS*RGWSTA
Trigger: GGCGGTGGACCAGCCGCGCCAGCTCTTCTGGGAGAA...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp AAGGCCAGTATTGCCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGACCGACTGGCAGCGGCTaGAGTTTGGTTTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KASIALACGGPQGFRERGPTGSG*SLVFRS
Trigger: GCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGG...TCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCGGCAGTGGAGCATTCTaGCAGCGCCGGGCGACCAAG +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLGSGAF*QRRATK
Trigger: CTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCC...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATACCTCGAGGAGCGTCTaGGAGCCTCACCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHTSRSV*EPHPVP
Trigger: TGGGACAGGGTGAGGCTCCCAGACGCTCCTCGAGGT...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATGCCCCATGCCAGGTCTaGGTTCTGGGGCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHAPCQV*VLGLEC
Trigger: ACACTCCAGCCCCAGAACCCAGACCTGGCATGGGGC...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGGAACGTTCCGGAAGCTaGGGGTGTTTTCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: EMGRGKQSVSECRADEGRERSGS*GCFPWA
Trigger: TGCCCATGGAAAACACCCCCAGCTTCCGGAACGTTC...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAAGTCTTGCTCCGGTATaGCCCTGTCCGAAAGAACGT +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSESLAPV*PCPKER
Trigger: ACGTTCTTTCGGACAGGGCCATACCGGAGCAAGACT...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTTCGTTCATCCCTGGATaGGCACTTGACTTGTTTACA +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPSFIPG*ALDLFT
Trigger: TGTAAACAAGTCAAGTGCCCATCCAGGGATGAACGA...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGATCTGCGGGTCGCTCTTaGCCTTGTTGCTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGSAGRS*PCCWGG
Trigger: ACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGA...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGGGAGGTCCATGGTCTTaGCCAGCTCCTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGGGPWS*PAPQQC
Trigger: ACATTGCTGAGGAGCTGGTCAAGACCATGGACCTCC...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp ATCACCCAACCAAAGACAGAAGCTCAAACGTGGGCACCAAAGTCTAGCGGACGCCCTCGTCGGTCACCATaGAGGCTTTGCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ITQPKTEAQTWAPKSSGRPRRSP*RLCTGA
Trigger: AGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGG...GCGTCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGTCTTTGGTTGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCGGGCGACCAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTC +
Preference number: 4 (lower is better)
Translates to: PGDQVPTGSGWSLVFRSEAQWVM*VSKLRL
Trigger: GAGGCGTAGTTTTGAAACTCACATCACCCACTGTGC...TTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTGGTCGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCGCACACAGGGAAGGCTaGCCGATGACGTGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLAHREG*PMTCLD
Trigger: GTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGC...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCATCCCCGGGGATCTTTaGGGTGGCGAGTGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLIPGDL*GGECVR
Trigger: CCGCACACACTCGCCACCGCAAAGATCCCCGGGGAT...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATGAATCTCACAGGCAGTaGCCAGCCACCCGCTACCAG +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHESHRQ*PATRYQ
Trigger: CTGGTAGCGGGTGGCTGGGCACTGCCTGTGAGATTC...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTAAGAGCGAAACTCCATaGCGAAGAAGAAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERKSETP*RRRRRK
Trigger: TTTTCTTCTTCTTCTTCGGCATGGAGTTTCGCTCTT...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCACTGCCGGGCACCTGCTaGCTGCTCTCCAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPLPGTC*LLSSLK
Trigger: CTTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAG...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTA +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHAPPQS*VPVSPL
Trigger: TAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGC...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATATTAGCTGGGCGTGGTaGCTACTCGGGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHISWAW*LLGRLR
Trigger: CCTCAGCCTCCCGAGTAGCCACCACGCCCAGCTAAT...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGGCTGGGCCGAGGGCTaGGAGGTGCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPGWAEG*EVHPRH
Trigger: GTGGCGAGGATGCACCTCCCAGCCCTCGGCCCAGCC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGGCGAGTGTGTGCGGTaGTCAGAAGGGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPGECVR*SEGLSL
Trigger: CAGGGACAGCCCTTCTGACCACCGCACACACTCGCC...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCGGGATCAGAGGGACTaGTCGGGGTCTGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLRDQRD*SGSVSD
Trigger: GTCACTGACAGACCCCGATCAGTCCCTCTGATCCCG...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp ATCACCCAACCAAAGACAGAAGCTCAAACGTGGGCACCAAAGTCTAGCGGACGCCCGCTACCAGAAAGCTaGGTCTTGCTCCGGTATGGC +
Preference number: 4 (lower is better)
Translates to: ITQPKTEAQTWAPKSSGRPLPES*VLLRYG
Trigger: GCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGG...GCGTCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGTCTTTGGTTGGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AAGGCCAGTATTGCCTTGGCCTGTGGGGGTCCCCAAGGTTTCAGGGAGAGAGGAAATCTGGAGCGAGTGTaGCAGAATCTCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KASIALACGGPQGFRERGNLERV*QNLTGS
Trigger: ACTGCCTGTGAGATTCTGTCACACTCGCTCCAGATT...TCCTCTCTCCCTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGGGAAATATCTTCAAATaGACGGCCGTGAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGGNIFK*TAVSVV
Trigger: AACCACGCTCACGGCCGTTCATTTGAAGATATTTCC...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCACCAGCTCTTCCTGCTaGTGTCCTCGTCGGTCACCA +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSTSSSC*CPRRSP
Trigger: TGGTGACCGACGAGGACATCAGCAGGAAGAGCTGGT...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR GCA 90 bp CAAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTGGCTCTTGTTCATCTTaGTCATCAGCATCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QVPTGSGWSLVFRSEGWRGSCSS*SSASCP
Trigger: CGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCC...ACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAGCAAAGGCCAGTATTaGCTTGGCCTGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSSKGQY*LGLWGS
Trigger: GGACCCCCACAGGCCAAGGCAATACTGGCCTTTGCT...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTAAGAGCGAAACTCCATaGCGAAGAAGAAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPKSETP*RRRRRK
Trigger: TTTTCTTCTTCTTCTTCGGCATGGAGTTTCGCTCTT...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCACCGGGAGGAGGAGGTTaGGGTGAGCCAAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPPGGGG*GEPSLH
Trigger: GTGCAAACTTGGCTCACCGCAACCTCCTCCTCCCGG...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAACCTTGTTGCTGGGGTaGTTGGTAATCTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTTLLLG*LVILVT
Trigger: GGTGACCAAGATTACCAACCACCCCAGCAACAAGGT...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCACCACCCCAAAGCTaGGTGCCTGTGTCGCCACTA +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPAPPQS*VPVSPL
Trigger: TAGTGGCGACACAGGCACCCAGCTTTGGGGTGGTGC...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTTLHSG*CEFQNY
Trigger: GTAGTTTTGAAACTCACATCACCCACTGTGCAGCGT...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTAATCTGGAGCGAGTGTaGCAGAATCTCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVNLERV*QNLTGS
Trigger: ACTGCCTGTGAGATTCTGTCACACTCGCTCCAGATT...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp AAGTCCCGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTACTTTTTGGACCCCTTaGATCTGGAGCGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: KSRLAAAGVWFSEAKAGVTFWTP*IWSECD
Trigger: GTCACACTCGCTCCAGATTCAAGGGGTCCAAAAAGT...AACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCGGGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCTCAGCATCTTGCCCGTaGGGAAGTCGAAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSSASCP*GSRRCS
Trigger: TGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGA...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACG +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPALHRG*VVLSHT
Trigger: CGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGC...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGCCCTTGCCCACAGATaGCCAGGCCGGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPALAHR*PGRPGL
Trigger: AAGACCAGGCCGGCCTGGGCATCTGTGGGCAAGGGC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGAAGGTGGAGGTTaGAGTGAGCCCAGATCACGC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLPEGGG*SEPRSR
Trigger: GCGTGATCTGGGCTCACTGCAACCTCCACCTTCTGG...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCTATTGCCTTGGCCTGTaGGGGTCCCCAAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSYCLGL*GSPRFQ
Trigger: CTGAAACCTTGGGGACCCCCACAGGCCAAGGCAATA...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGTLHSG*CEFQNY
Trigger: GTAGTTTTGAAACTCACATCACCCACTGTGCAGCGT...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR TCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCAGGGCAGGCTGGTCATaGGGCCCCCACGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPRAGWS*GPHERS
Trigger: GGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCT...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATCAGAGATCACACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHQRSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGATCTCTG...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCAGCGAAGGCTGGCGTTaGCACACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPSEGWR*HTGKAA
Trigger: GGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCT...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGACCTAAGCCTGACTCTTaGGTTGTGAATGTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGPKPDS*VVNVRE
Trigger: CTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGG...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTC +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGAQWVM*VSKLRL
Trigger: GAGGCGTAGTTTTGAAACTCACATCACCCACTGTGC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp ATCACCCAACCAAAGACAGAAGCTCAAACGTGGGCACCAAAGTCTAGCGGACGCCTGCACTCCAGCCTGTaGAACAAGAGCGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ITQPKTEAQTWAPKSSGRLHSSL*NKSERR
Trigger: TCTTCTTTCGCTCTTGTTGCACAGGCTGGAGTGCAG...GCGTCCGCTAGACTTTGGTGCCCACGTTTGAGCTTCTGTCTTTGGTTGGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCGCAGCGGCTGGAGTTTaGTTTTCAGAAGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLAAAGV*FSEAKA
Trigger: AGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGC...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCATTAGCTGGGCGTGGTaGCTACTCGGGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPISWAW*LLGRLR
Trigger: CCTCAGCCTCCCGAGTAGCCACCACGCCCAGCTAAT...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTC +
Preference number: 4 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPAQWVM*VSKLRL
Trigger: GAGGCGTAGTTTTGAAACTCACATCACCCACTGTGC...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
3UTR CAA 72 bp GGGCTGTGTTCGTTCATCCCTGGATGGGCACTTGACTaGTTTACACTTTTTGGACCCCTTGAATCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: GLCSFIPGWALD*FTLFGPLESGA
Trigger: CGCTCCAGATTCAAGGGGTCCAAAAAGTGTAAACAAGTCAAGTGCCCATCCAGGGATGAACGAACACAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCACGCTGCACAGTGGGTaGTGTGAGTTTCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLTLHSG*CEFQNY
Trigger: GTAGTTTTGAAACTCACATCACCCACTGTGCAGCGT...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR GCA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAATTAACTTTTGTGGGTaGCCTTTAGCCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGINFCG*PLAISP
Trigger: GGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAAT...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGGCTGCCCGATGACGTaGCTCGACTGTGTTACATTT +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPGCPMT*LDCVTF
Trigger: AAATGTAACACAGTCGAGGCACGTCATCGGGCAGCC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR TCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGCACAGTGGGTGATGTaGGTTTCAAAACTACGCCTC +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPAQWVM*VSKLRL
Trigger: GAGGCGTAGTTTTGAAACTCACATCACCCACTGTGC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR GCA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCATTAACTTTTGTGGGTaGCCTTTAGCCATTTCCCCC +
Preference number: 4 (lower is better)
Translates to: WNIIINFCGCPLAISPSPINFCG*PLAISP
Trigger: GGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAAT...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS GCA 90 bp CGGCTCTGGAACGCCCGCCGCGGGCCGCGTCCTCGCCATGCGCCTTaGGCTCTGCACCCTGTGGCCTGCGCCTTCCGCTCTGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RLWNARRGPRPRHAP*ALHPVACAFRSVPS
Trigger: GGAGGGCACAGAGCGGAAGGCGCAGGCCACAGGGTGCAGAGCGCAAGGCGCATGGCGAGGACGCGGCCCGCGGCGGGCGTTCCAGAGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS GCA 90 bp GCAGCGCCGTGTTCAGGTCGGGCTTGCCCTGCGGGAGGAAGGATATaGAGTCCGGCCTGGGGGCGCCCCGGCGGCGCGGAGCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AAPCSGRACPAGGRI*SPAWGRPGGAEPQG
Trigger: CCCCTGAGGCTCCGCGCCGCCGGGGCGCCCCCAGGCCGGACTGCATATCCTTCCTCCCGCAGGGCAAGCCCGACCTGAACACGGCGCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS CCA 90 bp GCCGCGGGCCGCGTCCTCGCCATGCGCCTTGCGCTCTGCACCCTGTaGCCTGCGCCTTCCGCTCTGTGCCCTCCGCCCGCTGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: AAGRVLAMRLALCTL*PAPSALCPPPAVTS
Trigger: GGAGGTCACAGCGGGCGGAGGGCACAGAGCGGAAGGCGCAGGCCACAGGGTGCAGAGCGCAAGGCGCATGGCGAGGACGCGGCCCGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS-3UTR CAA 90 bp GCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCCAGGGGGCACGGCCCTaGCCCACAGATGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AWFTWGRGPRLQAAPAGSQGARP*PTDAQA
Trigger: GGCCTGGGCATCTGTGGGCAAGGGCCGTGCCCCCTG...GCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCGGACCTCTTCCGCTCCATaGCGCCCGGCTCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: WGRGPRLQAAPAGSTGSRTSSAP*RPAPRP
Trigger: GGGCCGAGGAGCCGGGCGCAATGGAGCGGAAGAGGT...CCGAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS GCA 90 bp CTGCCAGGACCCGACTCCAGGGAGCCCCCGTGGCCCCGCAGCACCTaGCCTAGACGTGCTCCATCTCCGGGTCCGGGTCGGGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LPGPDSREPPWPRST*PRRAPSPGPGRAPP
Trigger: AGGAGGAGCCCGACCCGGACCCGGAGATGGAGCACGTCTAGGGCAGGTGCTGCGGGGCCACGGGGGCTCCCTGGAGTCGGGTCCTGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589064.5
ENST00000590550.6
CDS TCA 90 bp TTCCCGCTCGGGAAAGGCCGCAGTCGCCGTCCGGCAGCCAGTCCCTaGACGGCCGGCCGAAAGCCATGCGGCCCAACAAGCGGCGCACGC +
Preference number: 5 (lower is better)
Translates to: FPLGKGRSRRPAASP*TAGRKPCGPTSGAR
Trigger: GCGTGCGCCGCTTGTTGGGCCGCATGGCTTTCGGCCGGCCGTTCAGGGACTGGCTGCCGGACGGCGACTGCGGCCTTTCCCGAGCGGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585967.5
CDS TCA 90 bp GCGCGCACGAACAAAGGCCGCAGTCGCCGTCCGGCAGCCAGTCCCTaGACGGCCGGCCGAAAGCCATGCGGCCCAACAAGCGGCGCACGC +
Preference number: 5 (lower is better)
Translates to: ARTNKGRSRRPAASP*TAGRKPCGPTSGAR
Trigger: GCGTGCGCCGCTTGTTGGGCCGCATGGCTTTCGGCCGGCCGTTCAGGGACTGGCTGCCGGACGGCGACTGCGGCCTTTGTTCGTGCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592965.2
CDS GCA 90 bp TCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTGCGGGGAGGCGGGACGGTCG +
Preference number: 5 (lower is better)
Translates to: SGPWSRPGSAPAAAC*GTSSRSGCGEAGRS
Trigger: CGACCGTCCCGCCTCCCCGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
CDS GCA 90 bp TGCTCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTGCGGGGAGGCGGGACGG +
Preference number: 5 (lower is better)
Translates to: CSGPWSRPGSAPAAA*CGTSSRSGCGEAGR
Trigger: CCGTCCCGCCTCCCCGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGGCTCTTCCGCTCCATaGCGCCCGGCTCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQGSSAP*RPAPRP
Trigger: GGGCCGAGGAGCCGGGCGCAATGGAGCGGAAGAGCC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS-3UTR CAA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: RGAEDRVCRRLQQAARALRGCVV*SHTPGF
Trigger: GAACCCCGGCGTATGGCTCAACACCACGCAGCCCCT...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACGTGCGCCGCAGGCGTCTGTGGCTaGGAACCTGCCCTCGCCAAG +
Preference number: 5 (lower is better)
Translates to: QALSSGASPSRASSSTCAAGVCG*EPALAK
Trigger: CTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTGC...GGCGCACGTGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS GCA 90 bp GCCGACAGCCCCGACCTTCTGGGCACTTCTTCCCTCTCCCAGCCCTaGGGGAGCGCCGGGCACTCCCACCTCTTCCGCTCCATTGCGCCC +
Preference number: 5 (lower is better)
Translates to: ADSPDLLGTSSLSQP*GSAGHSHLFRSIAP
Trigger: GGGCGCAATGGAGCGGAAGAGGTGGGAGTGCCCGGCGCTCCCGCAGGGCTGGGAGAGGGAAGAAGTGCCCAGAAGGTCGGGGCTGTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR CAA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCCTCCATGCGGGTCCTaGGAGGGCAGACGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALPPCGS*EGRRWS
Trigger: GCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS GCA 90 bp TCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGAAAGGCCGCAGTCGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: SGPWSRPGSAPAAAC*GTSSRSGKAAVAVR
Trigger: CCGGACGGCGACTGCGGCCTTTCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585967.5
CDS-3UTR CAA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACGCGCCAGCTGCGGCTaGCTGCGGAACTTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGRASCG*LRNFFP
Trigger: CGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCG...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCCGCGCCAGCTGCGGCTaGCTGCGGAACTTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPRASCG*LRNFFP
Trigger: CGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCG...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCTTGGTCACCGGCTGCTaGAAGATGGACGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RGAEDRVCRRLQQAARALLVTGC*KMDAVW
Trigger: CCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAA...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGTCCTCAGCGCAGGCCTaGTCCAGCGGCGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRSSAQA*SSGASP
Trigger: CGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGGA...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGATCCCTCAGACGGCCTaGGGCCAGAAGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQIPQTA*GQKLPG
Trigger: TCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGAT...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS GCA 90 bp TCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTCTTCCGCTCCATTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: SGPWSRPGSAPAAAC*GTSSRSGSSAPLRP
Trigger: CGGGCGCAATGGAGCGGAAGAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS GCA 90 bp TGCTCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGAAAGGCCGCAGTCGCCGTC +
Preference number: 5 (lower is better)
Translates to: CSGPWSRPGSAPAAA*CGTSSRSGKAAVAV
Trigger: GACGGCGACTGCGGCCTTTCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585967.5
CDS GCA 90 bp TGCTCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTGCTCTCAGACACGGGGC +
Preference number: 5 (lower is better)
Translates to: CSGPWSRPGSAPAAA*CGTSSRSGCSQTRG
Trigger: GCCCCGTGTCTGAGAGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS-3UTR CAA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCAGGTCGGGCTTGCCCTaGACCTGGTTGGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGRSGLP*TWLEES
Trigger: CGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACCT...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPGRSMV*TSSSAM
Trigger: CATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCC...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPRGCVV*SHTPGF
Trigger: GAACCCCGGCGTATGGCTCAACACCACGCAGCCCCT...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: VHVGPRTASAGGSSRQHGVTMKA*HRGCVV
Trigger: CACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGAC...CCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGATCCTCAGCGCAGGCCTaGTCCAGCGGCGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRSSAQA*SSGASP
Trigger: CGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGGA...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTCCTCAGCGCAGGCCTaGTCCAGCGGCGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: STRHFPKPDSVEDERGGSSSAQA*SSGASP
Trigger: CGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGGA...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCAAGCGAAGGCTGGCGTaGGCACACAGGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVKRRLA*AHREGC
Trigger: GCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTT...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CAGGCCTTGTCCAGCGGCGCCTCCCCGTCACGGGCCAGCTCCTCCACGTGCGCCGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: QALSSGASPSRASSSTCAGSGWS*VFRSEG
Trigger: GCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCC...GGCGCACGTGGAGGAGCTGGCCCGTGACGGGGAGGCGCCGCTGGACAAGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592012.5
CDS-3UTR CAA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTCCTCCATGCGGGTCCTaGGAGGGCAGACGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERPPCGS*EGRRWS
Trigger: GCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCGGACACGTGAGGCTCTaGCTGCTGCTGGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPGHVRL*LLLASA
Trigger: GGCACTTGCCAGCAGCAGCAAGAGCCTCACGTGTCC...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS GCA 90 bp TGCTCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTCTTCCGCTCCATTGCGC +
Preference number: 5 (lower is better)
Translates to: CSGPWSRPGSAPAAA*CGTSSRSGSSAPLR
Trigger: GCGCAATGGAGCGGAAGAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS GCA 90 bp TCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTGCTCTCAGACACGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: SGPWSRPGSAPAAAC*GTSSRSGCSQTRGS
Trigger: AGAGCCCCGTGTCTGAGAGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS-3UTR CAA 90 bp ACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTTGGAACCTCGCGCCAGCTGCGGCTaGCTGCGGAACTTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: TRDWPQSPLGAGVCGLEPRASCG*LRNFFP
Trigger: CGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCG...AGGTTCCAAGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGAGGTCGGGCTTGCCCTaGACCTGGTTGGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQRSGLP*TWLEES
Trigger: CGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACCT...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GCCGGCTGGCAGTGGAGCATTCTGGCAGCGCCGGGCGACCAAGTCCCGACTGGCTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGWQWSILAAPGDQVPTGFCGSL*TLLLGW
Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...GCCAGTCGGGACTTGGTCGCCCGGCGCTGCCAGAATGCTCCACTGCCAGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: AGLRRRAWFTWGRGPRLQGSGWS*VFRSEG
Trigger: GCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCC...CTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp AGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTCAAGCAGGCGTCTGTGGCTaGGAACCTGCCCTCGCCAAG +
Preference number: 5 (lower is better)
Translates to: SKPWRRAAGHLLAALQSQAGVCG*EPALAK
Trigger: CTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTGC...TTGAGACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGCGAAAGATCCCAGCATaGGGAGCTCAGGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: AVSKPWRRAAGHLLAALQRKIPA*GAQASP
Trigger: CGGGGAAGCCTGAGCTCCCAATGCTGGGATCTTTCG...CTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCCGAAAGATCCCAGCATaGGGAGCTCAGGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPRKIPA*GAQASP
Trigger: CGGGGAAGCCTGAGCTCCCAATGCTGGGATCTTTCG...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTAGGTCGGGCTTGCCCTaGACCTGGTTGGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERRSGLP*TWLEES
Trigger: CGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACCT...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVGSLLT*LLGWLV
Trigger: TACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CTGTCCCGTGATGGGCATGGTGCTAGTGTGCAGGGCGCTGGCGATGGCCGACAGAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LSRDGHGASVQGAGDGRQRGCVV*SHTPGF
Trigger: GAACCCCGGCGTATGGCTCAACACCACGCAGCCCCT...CTGTCGGCCATCGCCAGCGCCCTGCACACTAGCACCATGCCCATCACGGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR CAA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGTCCTCAGCGCAGGCCTaGTCCAGCGGCGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SGLLEICCDSHEGHTQARSSAQA*SSGASP
Trigger: CGGGGAGGCGCCGCTGGACAAGGCCTGCGCTGAGGA...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TCCGGGCTCCTGGAGATTTGCTGTGACAGCCATGAGGGACACACACAGGCGAGGCAGGGGGCACGGCCCTaGCCCACAGATGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SGLLEICCDSHEGHTQARQGARP*PTDAQA
Trigger: GGCCTGGGCATCTGTGGGCAAGGGCCGTGCCCCCTG...CCTCGCCTGTGTGTGTCCCTCATGGCTGTCACAGCAAATCTCCAGGAGCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CCAGCTGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCTGCGGTGAGCCAAGTTaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PAVSKPWRRAAGHLLAALCGEPS*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAAACTTGGCTCACCGCA...GAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACGGAGATGGGAAGCTCTaGGGAGGCACCCGTCATCCC +
Preference number: 5 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHGDGKL*GGTRHP
Trigger: GGGATGACGGGTGCCTCCCAAGAGCTTCCCATCTCC...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS GCA 90 bp GATGGCCGACAGCAGCGTCTCATCCGTGCAGCCAGGTCCCACCCCTaGCAGGCAGTGGACAAACAGCCGCAAGTGGAGAGGTCACCACGG +
Preference number: 5 (lower is better)
Translates to: DGRQQRLIRAARSHP*QAVDKQPQVERSPR
Trigger: CCGTGGTGACCTCTCCACTTGCGGCTGTTTGTCCACTGCCTGGCAGGGGTGGGACCTGGCTGCACGGATGAGACGCTGCTGTCGGCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CCA 90 bp AGCAGCGTCTCATCCGTGCAGCCAGGTCCCACCCCTGCCAGGCAGTaGACAAACAGCCGCAAGTGGAGAGGTCACCACGGGGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SSVSSVQPGPTPARQ*TNSRKWRGHHGAAV
Trigger: CACAGCTGCCCCGTGGTGACCTCTCCACTTGCGGCTGTTTGTCCACTGCCTGGCAGGGGTGGGACCTGGCTGCACGGATGAGACGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CCA 90 bp TGGTTGGTAATCTTGGTCACCGGCTGCTTGAAGATGGACGCCGTCTaGCGCACGGGCAGCGCCGTGTTCAGGTCGGGCTTGCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: WLVILVTGCLKMDAV*RTGSAVFRSGLPCG
Trigger: CCCGCAGGGCAAGCCCGACCTGAACACGGCGCTGCCCGTGCGCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS-3UTR CAA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCCGCGCCAGCTGCGGCTaGCTGCGGAACTTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: RQCPATRYQKAESCSGMARASCG*LRNFFP
Trigger: CGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCG...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TGGCACCACCAGCCGCATGGCAGGGCAGAGAGTGGCGCCGTCCTGCATGCCCCCTTGCTCATCAGCATCTaGCCCGTGCGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: WHHQPHGRAESGAVLHAPLLISI*PVRKSK
Trigger: CTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAA...GGGGGCATGCAGGACGGCGCCACTCTCTGCCCTGCCATGCGGCTGGTGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCGGCTCTTGTTCATCTaGCTCATCAGCATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: PSLVHVGPRTASAGGSSRRLLFI*LISILP
Trigger: GGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCG...CCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCAGGTCGGGCTTGCCCTaGACCTGGTTGGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSRSGLP*TWLEES
Trigger: CGACTCCTCCAACCAGGTCAAGGGCAAGCCCGACCT...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCGTGTTCAGGTCGGGCTaGCCCTTGACCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVVFRSG*PLTWLE
Trigger: CTCCAACCAGGTCAAGGGCAAGCCCGACCTGAACAC...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GAGCGGCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCTTGGTCACCGGCTGCTaGAAGATGGACGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: ERRFLSSRGQAPSGMVTVLVTGC*KMDAVW
Trigger: CCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAA...GACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCTTGGTCACCGGCTGCTaGAAGATGGACGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPALVTGC*KMDAVW
Trigger: CCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAA...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CCTCCATGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: PPCGSLEGRRWSGASSAPGSLLT*LLGWLV
Trigger: TACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...GGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp AGGAGGGCACCAGGGACTGGCCGCAGAGTCCACTCGGGGCAGGCGTCTGTGGCTGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: RRAPGTGRRVHSGQASVAGSLLT*LLGWLV
Trigger: TACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...AGCCACAGACGCCTGCCCCGAGTGGACTCTGCGGCCAGTCCCTGGTGCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGGGGAGGAGCTGGCCTCGAGCCCAAAGGTCGTAGGGAGCCAGGCAGGGCCCAGGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: WGGAGLEPKGRREPGRAQGRSMV*TSSSAM
Trigger: CATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCC...CTGGGCCCTGCCTGGCTCCCTACGACCTTTGGGCTCGAGGCCAGCTCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS CCA 90 bp TCATCAGCATCTTGCCCGTGCGGAAGTCGAAGGTGCTCAGGTCCATaGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTGCGGAACT +
Preference number: 5 (lower is better)
Translates to: SSASCPCGSRRCSGP*SRPGSAPAAACCGT
Trigger: AGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS CCA 90 bp TATAGTAAAAGACATCCCTGTGGCCGGCCGACAGCCCCGACCTTCTaGGCACTTCTTCCCTCTCCCAGCCCTGCGGGAGCGCCGGGCACT +
Preference number: 5 (lower is better)
Translates to: YSKRHPCGRPTAPTF*ALLPSPSPAGAPGT
Trigger: AGTGCCCGGCGCTCCCGCAGGGCTGGGAGAGGGAAGAAGTGCCCAGAAGGTCGGGGCTGTCGGCCGGCCACAGGGATGTCTTTTACTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR CAA 90 bp TGTCAGCAAGCCGTGGCGCCGAGCTGCCGGGCACCTGCTGGCTGCTCTCCAGTCTTGCTCATCAGCATCTaGCCCGTGCGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: CQQAVAPSCRAPAGCSPVLLISI*PVRKSK
Trigger: CTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAA...GACTGGAGAGCAGCCAGCAGGTGCCCGGCAGCTCGGCGCCACGGCTTGCTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCGTGTTCAGGTCGGGCTaGCCCTTGACCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSVFRSG*PLTWLE
Trigger: CTCCAACCAGGTCAAGGGCAAGCCCGACCTGAACAC...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGAGGGTGGTTGGTAATCTaGGTCACCGGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGGWLVI*VTGCLK
Trigger: CTTCAAGCAGCCGGTGACCAAGATTACCAACCACCC...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TTCCTCCTGGGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: FLLGVSKAGLRRRAWFTWVTMKA*HRGCVV
Trigger: CACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGAC...CCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACCCAGGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GGCACCGCACAGGGCAGGCTGGTCATGAGGCCCCCACGAAAGATCCCAGCATTGAAGCGAAGGCTGGCGTaGGCACACAGGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GTAQGRLVMRPPRKIPALKRRLA*AHREGC
Trigger: GCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTT...CAATGCTGGGATCTTTCGTGGGGGCCTCATGACCAGCCTGCCCTGTGCGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCACAGGAAGGCCAGTATTGCCTaGGCCTGTGGGGGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: SSAPAVRPHQGWSQSSHRKASIA*ACGGPQ
Trigger: TTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT...CCTGTGGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp GGGCCCAGGAGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTTGCGGTGAGCCAAGTTaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPRSTRHFPKPDSVEDERCGEPS*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAAACTTGGCTCACCGCA...ACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCTCCTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGCAGCACGGGCTCTCCTCAACAAAATTCTTTaGCCCGTGGCCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: RGAEDRVCRRLQQAARALLNKIL*PVANMV
Trigger: CACCATGTTGGCCACGGGCAAAAGAATTTTGTTGAG...GAGAGCCCGTGCTGCCTGCTGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS GCA 90 bp CTGCTGATGTCCTCGTCGGTCACCATGAAGGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACGCCGGGGTTCTTCTCCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LLMSSSVTMKALHRG*VVLSHTPGFFSTAA
Trigger: GGCCGCCGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGACATCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589064.5
ENST00000592012.5
CDS GCA 90 bp CTTCCCGCTCGGGCTGCTCTCAGACACGGGGCTCTGCTCTCAGCCTaGCATGGACAAGCGCCGGCAACTCATCCTCTCCAGGACATAAGG +
Preference number: 5 (lower is better)
Translates to: LPARAALRHGALLSA*HGQAPATHPLQDIR
Trigger: CCTTATGTCCTGGAGAGGATGAGTTGCCGGCGCTTGTCCATGGCAGGCTGAGAGCAGAGCCCCGTGTCTGAGAGCAGCCCGAGCGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CCA 90 bp TGGTTGGTAATCTTGGTCACCGGCTGCTTGAAGATGGACGCCGTCTaGCGCACGGGCAGCGCCGTGTTCAGGTCGGGCTTGCCCTTGACC +
Preference number: 5 (lower is better)
Translates to: WLVILVTGCLKMDAV*RTGSAVFRSGLPLT
Trigger: GGTCAAGGGCAAGCCCGACCTGAACACGGCGCTGCCCGTGCGCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
CDS CCA 90 bp CGCTCGGGCTGCTCTCAGACACGGGGCTCTGCTCTCAGCCTGCCATaGACAAGCGCCGGCAACTCATCCTCTCCAGGACATAAGGACACC +
Preference number: 5 (lower is better)
Translates to: RSGCSQTRGSALSLP*TSAGNSSSPGHKDT
Trigger: GGTGTCCTTATGTCCTGGAGAGGATGAGTTGCCGGCGCTTGTCCATGGCAGGCTGAGAGCAGAGCCCCGTGTCTGAGAGCAGCCCGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS-3UTR CAA 90 bp TGGCACCCCTGGGAGCGTCAGCACCACCCCAAAGCTGGGTGCCTGTGTCGCCACTTGCTCATCAGCATCTaGCCCGTGCGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: WHPWERQHHPKAGCLCRHLLISI*PVRKSK
Trigger: CTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAA...GTGGCGACACAGGCACCCAGCTTTGGGGTGGTGCTGACGCTCCCAGGGGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GCGCTTCCTCAGCTCCCGCGGTCAGGCCCCATCAGGGATGGTCACAGTCCAGCCTTGCTCATCAGCATCTaGCCCGTGCGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: ALPQLPRSGPIRDGHSPALLISI*PVRKSK
Trigger: CTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAA...GGCTGGACTGTGACCATCCCTGATGGGGCCTGACCGCGGGAGCTGAGGAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GGTGTCTCCAAGGCTGGGCTTCGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACGGCTCTTGTTCATCTaGCTCATCAGCATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GVSKAGLRRRAWFTWGRGRLLFI*LISILP
Trigger: GGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCG...TCCTCGGCCCCACGTGAACCAGGCTCGGCGGCGAAGCCCAGCCTTGGAGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGATTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRFCGSL*TLLLGW
Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGATTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRFCGSL*TLLLGW
Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGTCCCGTGATGGGCATGGTGCTAGTGTGCAGGGCGCTGGCGATGGCCGACAGCGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: CPVMGMVLVCRALAMADSGRSMV*TSSSAM
Trigger: CATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCC...GCTGTCGGCCATCGCCAGCGCCCTGCACACTAGCACCATGCCCATCACGGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR CAA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACAAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LALAHREGCPMTCLDCVTRGCVV*SHTPGF
Trigger: GAACCCCGGCGTATGGCTCAACACCACGCAGCCCCT...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp AGGCAGTGCCCAGCCACCCGCTACCAGAAAGCTGAGTCTTGCTCCGGTATGGCCATCCCTCAGACGGCCTaGGGCCAGAAGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: RQCPATRYQKAESCSGMAIPQTA*GQKLPG
Trigger: TCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGAT...GGCCATACCGGAGCAAGACTCAGCTTTCTGGTAGCGGGTGGCTGGGCACTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp GAGATGGGAAGAGGGAAACAGAGTGTCTCTGAGTGCCGGGCAGATGAGGGGAGGCCTCCATGCGGGTCCTaGGAGGGCAGACGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: EMGRGKQSVSECRADEGRPPCGS*EGRRWS
Trigger: GCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG...CCTCCCCTCATCTGCCCGGCACTCAGAGACACTCTGTTTCCCTCTTCCCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGAAAGGCCAGTATTGCCTaGGCCTGTGGGGGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRKASIA*ACGGPQ
Trigger: TTGGGGACCCCCACAGGCCAAGGCAATACTGGCCTT...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACACATCCCCGGGGATCTTaGCGGTGGCGAGTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: LALAHREGCPMTCLDCVTHPRGS*RWRVCA
Trigger: CGCACACACTCGCCACCGCAAAGATCCCCGGGGATG...TGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CGCCGCCGAGCCTGGTTCACGTGGGGCCGAGGACCGCGTCTGCAGGCGGCTCCAGCAGGGAAGGCAGTTTaGTGGTCTCATATTATTTGC +
Preference number: 5 (lower is better)
Translates to: RRRAWFTWGRGPRLQAAPAGKAV*WSHIIC
Trigger: GCAAATAATATGAGACCACAAAACTGCCTTCCCTGC...TGGAGCCGCCTGCAGACGCGGTCCTCGGCCCCACGTGAACCAGGCTCGGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS GCA 90 bp TGTTCATCTTGCTCATCAGCATCTTGCCCGTGCGGAAGTCGAAGGTaGTCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: CSSCSSASCPCGSRR*SGPWSRPGSAPAAA
Trigger: AGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS GCA 90 bp CGCGCTGGCGGCTCTTGTTCATCTTGCTCATCAGCATCTTGCCCGTaGGGAAGTCGAAGGTGCTCAGGTCCATGGAGCCGCCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RAGGSCSSCSSASCP*GSRRCSGPWSRPGS
Trigger: GCTACCTGGGCGGCTCCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS GCA 90 bp AGCGCACGCGCTGGCGGCTCTTGTTCATCTTGCTCATCAGCATCTTaGCCGTGCGGAAGTCGAAGGTGCTCAGGTCCATGGAGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: SARAGGSCSSCSSAS*PCGSRRCSGPWSRP
Trigger: TGGGCGGCTCCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS GCA 90 bp TTCCTGATGTCCTCGTCGGTCACCATGAAGGCTTTGCACAGGGGCTaGGTGGTGTTGAGCCATACGCCGGGGTTCTTCTCCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: FLMSSSVTMKALHRG*VVLSHTPGFFSTAA
Trigger: GGCCGCCGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGACATCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000589901.2
ENST00000590550.6
ENST00000590830.5
CDS GCA 90 bp TGCTCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTATAGTAAAAGACATCCC +
Preference number: 5 (lower is better)
Translates to: CSGPWSRPGSAPAAA*CGTSSRSGYSKRHP
Trigger: GGGATGTCTTTTACTATAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR CAA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGAACGCGCTGGCGGCTCTaGTTCATCTTGCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRTRWRL*FILLIS
Trigger: GCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGT...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CCTCTGGAAAGGACAGGGAGGGCTGGCTTTAGCGACTCCACGGGACGGGGACGCGGGTGGTTGGTAATCTaGGTCACCGGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PLERTGRAGFSDSTGRGRGWLVI*VTGCLK
Trigger: CTTCAAGCAGCCGGTGACCAAGATTACCAACCACCC...GCGTCCCCGTCCCGTGGAGTCGCTAAAGCCAGCCCTCCCTGTCCTTTCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CAA 90 bp AGTCCTGCTCCATGGTGTGGCCGGGCCGGGCTGTGTTCGTTCATCCCTGGATGGGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: SPAPWCGRAGLCSFIPGWGRSMV*TSSSAM
Trigger: CATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCC...CCATCCAGGGATGAACGAACACAGCCCGGCCCGGCCACACCATGGAGCAGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGGCAGCGGCTGGAGTTaGGTTTTCAGAAGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRGSGWS*VFRSEG
Trigger: GCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCC...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GTCATCCCAAGCACATCTGTGTTCACCAGGCAGTCCCCACTGCCAGGACCCGACATCCCTCAGACGGCCTaGGGCCAGAAGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: VIPSTSVFTRQSPLPGPDIPQTA*GQKLPG
Trigger: TCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGAT...GTCGGGTCCTGGCAGTGGGGACTGCCTGGTGAACACAGATGTGCTTGGGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CAA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCCTCCATGCGGGTCCTaGGAGGGCAGACGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGPPCGS*EGRRWS
Trigger: GCTCCACCGTCTGCCCTCCAAGGACCCGCATGGAGG...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GGCCTCCCAGCCTTCAGGTCCAGAAAGCAGCTTCCAGTGGCCATGGCTAGTGAGTGTAATCCCGGCAATTaGGGAAGCTGGGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: GLPAFRSRKQLPVAMASECNPGN*GSWGGR
Trigger: CCGCCCGCCCCAGCTTCCCAAATTGCCGGGATTACA...CTCACTAGCCATGGCCACTGGAAGCTGCTTTCTGGACCTGAAGGCTGGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp ACCCCTAAGCCTGACTCTTGGGTTGTGAATGTCCGCGAGGTTGGGGGACCTGCTCATCCCCGGGGATCTTaGCGGTGGCGAGTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: TPKPDSWVVNVREVGGPAHPRGS*RWRVCA
Trigger: CGCACACACTCGCCACCGCAAAGATCCCCGGGGATG...AGCAGGTCCCCCAACCTCGCGGACATTCACAACCCAAGAGTCAGGCTTAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TGCGGGTCCTTGGAGGGCAGACGGTGGAGCGGCGCTTCCTCAGCTCCCGCGGTCGGATGGGCACTTGACTaGTTTACACTTTTTGGACCC +
Preference number: 5 (lower is better)
Translates to: CGSLEGRRWSGASSAPAVGWALD*FTLFGP
Trigger: GGGTCCAAAAAGTGTAAACAAGTCAAGTGCCCATCC...GACCGCGGGAGCTGAGGAAGCGCCGCTCCACCGTCTGCCCTCCAAGGACCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS GCA 90 bp TCAGGTCCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTATAGTAAAAGACATCCCTGT +
Preference number: 5 (lower is better)
Translates to: SGPWSRPGSAPAAAC*GTSSRSGYSKRHPC
Trigger: ACAGGGATGTCTTTTACTATAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS-3UTR CAA 90 bp CTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGTGGGGGGGTGGTTGGTAATCTaGGTCACCGGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LPEAGLCRGRAWRVFRVGGWLVI*VTGCLK
Trigger: CTTCAAGCAGCCGGTGACCAAGATTACCAACCACCC...CCCCACCCGAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTTTCGGGAGGTCCATGGTCTaGACCAGCTCCTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: TRHFPKPDSVEDERGGSFGRSMV*TSSSAM
Trigger: CATTGCTGAGGAGCTGGTCAAGACCATGGACCTCCC...GAAAGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGTGTAATCCCGGCAATTaGGGAAGCTGGGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVCNPGN*GSWGGR
Trigger: CCGCCCGCCCCAGCTTCCCAAATTGCCGGGATTACA...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACAGGACACGTGAGGCTCTaGCTGCTGCTGGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTGHVRL*LLLASA
Trigger: GGCACTTGCCAGCAGCAGCAAGAGCCTCACGTGTCC...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS GCA 90 bp GGTTGGAGGAGTCGTAGCGCACGCGCTGGCGGCTCTTGTTCATCTTaGTCATCAGCATCTTGCCCGTGCGGAAGTCGAAGGTGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GWRSRSARAGGSCSS*SSASCPCGSRRCSG
Trigger: ACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGTGCGCTACGACTCCTCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS CCA 90 bp TGGTCCACCGCCTTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTaGTTGGTAATCTTGGTCACCGGCTGCTTGAAGATGGACGCCGTC +
Preference number: 5 (lower is better)
Translates to: WSTAFCGSLLTLLLG*LVILVTGCLKMDAV
Trigger: GACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS-3UTR CAA 90 bp GAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGCCTCGACGGCTCTTGTTCATCTaGCTCATCAGCATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: EAKAGVGTQGRLPDDVPRRLLFI*LISILP
Trigger: GGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCG...TCGAGGCACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGATCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTAATC +
Preference number: 5 (lower is better)
Translates to: TTPPDRETLPAVSKPWRRSLLTL*LGWLVI
Trigger: GATTACCAACCACCCCAGCAACAAGGTCAAGAGCGA...TCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CACTTCTCACCGGGCACGACCTCTAGCAAAGGCCAGTATTGCCTTGGCCTGTGGAAGTCCCAGAAGGTCTaGGGGCTGAGACATGGGCGG +
Preference number: 5 (lower is better)
Translates to: HFSPGTTSSKGQYCLGLWKSQKV*GLRHGR
Trigger: CCGCCCATGTCTCAGCCCCAAGACCTTCTGGGACTT...CCACAGGCCAAGGCAATACTGGCCTTTGCTAGAGGTCGTGCCCGGTGAGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CTCAAACGTGGGCACCAAAGTCTAGCGGACGCACCGAACTCCAGGCTCCAAGCAACGCGCTGGCGGCTCTaGTTCATCTTGCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LKRGHQSLADAPNSRLQATRWRL*FILLIS
Trigger: GCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGT...TGCTTGGAGCCTGGAGTTCGGTGCGTCCGCTAGACTTTGGTGCCCACGTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TTTTCAGAAGCGAAGGCTGGCGTTGGCACACAGGGAAGGCTGCCCGATGACGTGACGCGCTGGCGGCTCTaGTTCATCTTGCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: FSEAKAGVGTQGRLPDDVTRWRL*FILLIS
Trigger: GCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGT...CACGTCATCGGGCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTTCTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGTTCTGCGGGTCGCTCTaGACCTTGTTGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PMTCLDCVTFTEGERPPGFCGSL*TLLLGW
Trigger: CCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA...CCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGRGCVV*SHTPGF
Trigger: GAACCCCGGCGTATGGCTCAACACCACGCAGCCCCT...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGCAGGCGTCTGTGGCTaGGAACCTGCCCTCGCCAAG +
Preference number: 5 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGAGVCG*EPALAK
Trigger: CTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTGC...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCGCAGGCGTCTGTGGCTaGGAACCTGCCCTCGCCAAG +
Preference number: 5 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSAGVCG*EPALAK
Trigger: CTTGGCGAGGGCAGGTTCCAAGCCACAGACGCCTGC...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGCCGTGGCGCCGAGCCTCAACAAAATTCTTTaGCCCGTGGCCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: YASRPRNPPSCQQAVAPSLNKIL*PVANMV
Trigger: CACCATGTTGGCCACGGGCAAAAGAATTTTGTTGAG...GCTCGGCGCCACGGCTTGCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp CCCCAAAGCTGGGTGCCTGTGTCGCCACTAAACAGAAGGGAAACCGAGGCAGGGTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTAATC +
Preference number: 5 (lower is better)
Translates to: PQSWVPVSPLNRRETEAGSLLTL*LGWLVI
Trigger: GATTACCAACCACCCCAGCAACAAGGTCAAGAGCGA...CCCTGCCTCGGTTTCCCTTCTGTTTAGTGGCGACACAGGCACCCAGCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATAAGCGAAGGCTGGCGTaGGCACACAGGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHKRRLA*AHREGC
Trigger: GCAGCCTTCCCTGTGTGCCAACGCCAGCCTTCGCTT...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCATCCCTCAGACGGCCTaGGGCCAGAAGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSIPQTA*GQKLPG
Trigger: TCCAGGGAGCTTCTGGCCCAAGGCCGTCTGAGGGAT...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp AGCACCCGGCACTTCCCGAAGCCGGACTCTGTAGAGGACGAGCGTGGAGGGTCTGGATGGGCACTTGACTaGTTTACACTTTTTGGACCC +
Preference number: 5 (lower is better)
Translates to: STRHFPKPDSVEDERGGSGWALD*FTLFGP
Trigger: GGGTCCAAAAAGTGTAAACAAGTCAAGTGCCCATCC...AGACCCTCCACGCTCGTCCTCTACAGAGTCCGGCTTCGGGAAGTGCCGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCACGGGACGGGGACGCTaGGGCTCTTCTAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSTGRGR*GSSREM
Trigger: CATCTCCCTAGAAGAGCCCAAGCGTCCCCGTCCCGT...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590550.6
CDS-3UTR CAA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCGTGTTCAGGTCGGGCTaGCCCTTGACCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSVFRSG*PLTWLE
Trigger: CTCCAACCAGGTCAAGGGCAAGCCCGACCTGAACAC...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATGTGTTCAGGTCGGGCTaGCCCTTGACCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHVFRSG*PLTWLE
Trigger: CTCCAACCAGGTCAAGGGCAAGCCCGACCTGAACAC...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CGACTGGCAGCGGCTGGAGTTTGGTTTTCAGAAGCGAAGGCTGGCGTTGGCACATCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTAATC +
Preference number: 5 (lower is better)
Translates to: RLAAAGVWFSEAKAGVGTSLLTL*LGWLVI
Trigger: GATTACCAACCACCCCAGCAACAAGGTCAAGAGCGA...TGTGCCAACGCCAGCCTTCGCTTCTGAAAACCAAACTCCAGCCGCTGCCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSVTMKA*HRGCVV
Trigger: CACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGAC...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp GATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCAGCTGTCAGCAAGTCCCAGAAGGTCTaGGGGCTGAGACATGGGCGG +
Preference number: 5 (lower is better)
Translates to: DVSFKTTPPDRETLPAVSKSQKV*GLRHGR
Trigger: CCGCCCATGTCTCAGCCCCAAGACCTTCTGGGACTT...GCTGACAGCTGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp GAAGGCTTTGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCGGGGTTCTTCTCAGGTGGAAGGATCACTaGAACCCAGTTGAAACCAGG +
Preference number: 5 (lower is better)
Translates to: EGFAQGLRGVEPYAGVLLRWKDH*NPVETR
Trigger: CCTGGTTTCAACTGGGTTCAAGTGATCCTTCCACCT...GAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585903.1
CDS-3UTR CAA 90 bp TGCACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCACGCGCTGGCGGCTCTaGTTCATCTTGCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: CTVGDVSFKTTPPDRETLTRWRL*FILLIS
Trigger: GCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGT...GAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ATGACGTGCCTCGACTGTGTTACATTTACTGAAGGAGAGCGGCCTCCTGGGCATGGGTGGTTGGTAATCTaGGTCACCGGCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: MTCLDCVTFTEGERPPGHGWLVI*VTGCLK
Trigger: CTTCAAGCAGCCGGTGACCAAGATTACCAACCACCC...ATGCCCAGGAGGCCGCTCTCCTTCAGTAAATGTAACACAGTCGAGGCACGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp CACAGGGAAGGCTGCCCGATGACGTGCCTCGACTGTGTTACATTTACTGAAGGATCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTAATC +
Preference number: 5 (lower is better)
Translates to: HREGCPMTCLDCVTFTEGSLLTL*LGWLVI
Trigger: GATTACCAACCACCCCAGCAACAAGGTCAAGAGCGA...TCCTTCAGTAAATGTAACACAGTCGAGGCACGTCATCGGGCAGCCTTCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp ACAGTGGGTGATGTGAGTTTCAAAACTACGCCTCCAGACCGAGAAACCCTCCCACGGCTCTTGTTCATCTaGCTCATCAGCATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: TVGDVSFKTTPPDRETLPRLLFI*LISILP
Trigger: GGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCG...TGGGAGGGTTTCTCGGTCTGGAGGCGTAGTTTTGAAACTCACATCACCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000590550.6
ENST00000592012.5
CDS-3UTR CAA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: WNIIINFCGCPLAISPSPVTMKA*HRGCVV
Trigger: CACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGAC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS-3UTR CAA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: WNIIINFCGCPLAISPSPGSLLT*LLGWLV
Trigger: TACCAACCACCCCAGCAACAAGGTCAAGAGCGACCC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS CCA 90 bp GCCCCAAGAATGGGAGCTGCCACCTTCTTGGAAGGAACCCCAACTTaGGTTCCATTTCTAAATTCCCTCTCCCGCTTGTGTTACTACATT +
Preference number: 5 (lower is better)
Translates to: APRMGAATFLEGTPT*VPFLNSLSRLCYYI
Trigger: AATGTAGTAACACAAGCGGGAGAGGGAATTTAGAAATGGAACCCAAGTTGGGGTTCCTTCCAAGAAGGTGGCAGCTCCCATTCTTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CCA 90 bp TCACACTACAGGATGACAAGCACCCAACCCAACACACCGTCATCATaGTTGGGATGTAAGATGGAACAGCCATGTTGGAAAAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: SHYRMTSTQPNTPSS*LGCKMEQPCWKSLT
Trigger: TGTCAGGCTTTTCCAACATGGCTGTTCCATCTTACATCCCAACCATGATGACGGTGTGTTGGGTTGGGTGCTTGTCATCCTGTAGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS-3UTR CAA 90 bp TGGAACATTATCATTAACTTTTGTGGGTGCCCTTTAGCCATTTCCCCCAGTCCCGCAGGGAAGGCAGTTTaGTGGTCTCATATTATTTGC +
Preference number: 5 (lower is better)
Translates to: WNIIINFCGCPLAISPSPAGKAV*WSHIIC
Trigger: GCAAATAATATGAGACCACAAAACTGCCTTCCCTGC...GGGACTGGGGGAAATGGCTAAAGGGCACCCACAAAAGTTAATGATAATGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156825.5
ENST00000434436.8
CDS CAA 90 bp GCGGCTTGCTGCGGAACTTCTTCCCGCTCGGGCTCTTCCGCTCCATaGCGCCCGGCTCCTCGGCCCGCCGCCGGGCCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: AACCGTSSRSGSSAP*RPAPRPAAGPAAAA
Trigger: GGCGGCGGCGGCGGGCCCGGCGGCGGGCCGAGGAGCCGGGCGCAATGGAGCGGAAGAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS GCA 72 bp GCTGCGGCTTGCTGCGGAACTTCTTCCCGCTCGGGCTaGGGGGAGGCGGGACGGTCGGCGCCCCGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: AAACCGTSSRSG*GEAGRSAPRAD
Trigger: GTCCGCCCGGGGCGCCGACCGTCCCGCCTCCCCGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
CDS CAA 90 bp CCGGCTCTGGAACGCCCGCCGCGGGCCGCGTCCTCGCCATGCGCCTaGCGCTCTGCACCCTGTGGCCTGCGCCTTCCGCTCTGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: PALERPPRAASSPCA*RSAPCGLRLPLCAL
Trigger: GAGGGCACAGAGCGGAAGGCGCAGGCCACAGGGTGCAGAGCGCAAGGCGCATGGCGAGGACGCGGCCCGCGGCGGGCGTTCCAGAGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS GCA 72 bp AACGCCCGCCGCGGGCCGCGTCCTCGCCATGCGCCTTaGGCTCTGCACCCTGTGGCCTGCGCCTTCCGCTCT +
Preference number: 6 (lower is better)
Translates to: NARRGPRPRHAP*ALHPVACAFRS
Trigger: AGAGCGGAAGGCGCAGGCCACAGGGTGCAGAGCGCAAGGCGCATGGCGAGGACGCGGCCCGCGGCGGGCGTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS GCA 72 bp GCTCTGGAACGCCCGCCGCGGGCCGCGTCCTCGCCATaGGCCTTGCGCTCTGCACCCTGTGGCCTGCGCCTT +
Preference number: 6 (lower is better)
Translates to: ALERPPRAASSP*ALRSAPCGLRL
Trigger: AAGGCGCAGGCCACAGGGTGCAGAGCGCAAGGCGCATGGCGAGGACGCGGCCCGCGGCGGGCGTTCCAGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS GCA 72 bp TGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTGCGGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: WSRPGSAPAAAC*GTSSRSGCGEA
Trigger: CGCCTCCCCGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
CDS GCA 72 bp TGTTCAGGTCGGGCTTGCCCTGCGGGAGGAAGGATATaGAGTCCGGCCTGGGGGCGCCCCGGCGGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: CSGRACPAGGRI*SPAWGRPGGAE
Trigger: CTCCGCGCCGCCGGGGCGCCCCCAGGCCGGACTGCATATCCTTCCTCCCGCAGGGCAAGCCCGACCTGAACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS CCA 72 bp CGCGTCCTCGCCATGCGCCTTGCGCTCTGCACCCTGTaGCCTGCGCCTTCCGCTCTGTGCCCTCCGCCCGCT +
Preference number: 6 (lower is better)
Translates to: RVLAMRLALCTL*PAPSALCPPPA
Trigger: AGCGGGCGGAGGGCACAGAGCGGAAGGCGCAGGCCACAGGGTGCAGAGCGCAAGGCGCATGGCGAGGACGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS GCA 72 bp CCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: PWSRPGSAPAAA*CGTSSRSGCGE
Trigger: CTCCCCGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
CDS GCA 72 bp CGCACGGGCAGCGCCGTGTTCAGGTCGGGCTTGCCCTaGGGGAGGAAGGATATGCAGTCCGGCCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: RTGSAVFRSGLP*GRKDMQSGLGA
Trigger: CGCCCCCAGGCCGGACTGCATATCCTTCCTCCCGCAGGGCAAGCCCGACCTGAACACGGCGCTGCCCGTGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS TCA 72 bp GGGAAAGGCCGCAGTCGCCGTCCGGCAGCCAGTCCCTaGACGGCCGGCCGAAAGCCATGCGGCCCAACAAGC +
Preference number: 6 (lower is better)
Translates to: GKGRSRRPAASP*TAGRKPCGPTS
Trigger: GCTTGTTGGGCCGCATGGCTTTCGGCCGGCCGTTCAGGGACTGGCTGCCGGACGGCGACTGCGGCCTTTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585967.5
CDS GCA 72 bp TGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTCTTCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: WSRPGSAPAAAC*GTSSRSGSSAP
Trigger: TGGAGCGGAAGAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS GCA 72 bp CCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: PWSRPGSAPAAA*CGTSSRSGSSA
Trigger: AGCGGAAGAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000156825.5
CDS GCA 72 bp TGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGAAAGGCCGCAGTC +
Preference number: 6 (lower is better)
Translates to: WSRPGSAPAAAC*GTSSRSGKAAV
Trigger: GACTGCGGCCTTTCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585967.5
CDS GCA 72 bp CCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGAAAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: PWSRPGSAPAAA*CGTSSRSGKAA
Trigger: TGCGGCCTTTCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585967.5
CDS GCA 72 bp TCTGGCGCACGGGCAGCGCCGTGTTCAGGTCGGGCTTaGCCTGCGGGAGGAAGGATATGCAGTCCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SGARAAPCSGRA*PAGGRICSPAW
Trigger: CCAGGCCGGACTGCATATCCTTCCTCCCGCAGGGCAAGCCCGACCTGAACACGGCGCTGCCCGTGCGCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590830.5
CDS GCA 72 bp CCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: PWSRPGSAPAAA*CGTSSRSGCSQ
Trigger: CTGAGAGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CCA 72 bp AGACATCCCTGTGGCCGGCCGACAGCCCCGACCTTCTaGGCACTTCTTCCCTCTCCCAGCCCTGCGGGAGCG +
Preference number: 6 (lower is better)
Translates to: RHPCGRPTAPTF*ALLPSPSPAGA
Trigger: CGCTCCCGCAGGGCTGGGAGAGGGAAGAAGTGCCCAGAAGGTCGGGGCTGTCGGCCGGCCACAGGGATGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS TCA 72 bp AACAAAGGCCGCAGTCGCCGTCCGGCAGCCAGTCCCTaGACGGCCGGCCGAAAGCCATGCGGCCCAACAAGC +
Preference number: 6 (lower is better)
Translates to: NKGRSRRPAASP*TAGRKPCGPTS
Trigger: GCTTGTTGGGCCGCATGGCTTTCGGCCGGCCGTTCAGGGACTGGCTGCCGGACGGCGACTGCGGCCTTTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592965.2
CDS GCA 72 bp TGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTGCTCTCAGACA +
Preference number: 6 (lower is better)
Translates to: WSRPGSAPAAAC*GTSSRSGCSQT
Trigger: TGTCTGAGAGCAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CCA 72 bp TCTTGCCCGTGCGGAAGTCGAAGGTGCTCAGGTCCATaGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGC +
Preference number: 6 (lower is better)
Translates to: SCPCGSRRCSGP*SRPGSAPAAAC
Trigger: GCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS GCA 72 bp TCCCAGAAGAGCTGGCGCGGCTGGTCCACCGCCTTCTaGGGGTCGCTCTTGACCTTGTTGCTGGGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SQKSWRGWSTAF*GSLLTLLLGWL
Trigger: CAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCAGCCGCGCCAGCTCTTCTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS GCA 72 bp TCGGCCATCAGCGCCTCCTCCAGCCGCTTCCGCACCTaGTGCACCAGCTCTTCCTGCTTCCTGATGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SAISASSSRFRT*CTSSSCFLMSS
Trigger: CGAGGACATCAGGAAGCAGGAAGAGCTGGTGCAGCAGGTGCGGAAGCGGCTGGAGGAGGCGCTGATGGCCGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000589901.2
ENST00000590550.6
ENST00000590830.5
CDS GCA 72 bp CAGCAGCGTCTCATCCGTGCAGCCAGGTCCCACCCCTaGCAGGCAGTGGACAAACAGCCGCAAGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: QQRLIRAARSHP*QAVDKQPQVER
Trigger: CCTCTCCACTTGCGGCTGTTTGTCCACTGCCTGGCAGGGGTGGGACCTGGCTGCACGGATGAGACGCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS GCA 72 bp TTCTTCCCGCTCGGGCTGCTCTCAGACACGGGGCTCTaGTCTCAGCCTGCCATGGACAAGCGCCGGCAACTC +
Preference number: 6 (lower is better)
Translates to: FFPLGLLSDTGL*SQPAMDKRRQL
Trigger: GAGTTGCCGGCGCTTGTCCATGGCAGGCTGAGAGCAGAGCCCCGTGTCTGAGAGCAGCCCGAGCGGGAAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CCA 72 bp ATCTTGGTCACCGGCTGCTTGAAGATGGACGCCGTCTaGCGCACGGGCAGCGCCGTGTTCAGGTCGGGCTTG +
Preference number: 6 (lower is better)
Translates to: ILVTGCLKMDAV*RTGSAVFRSGL
Trigger: CAAGCCCGACCTGAACACGGCGCTGCCCGTGCGCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CCA 72 bp TCATCCGTGCAGCCAGGTCCCACCCCTGCCAGGCAGTaGACAAACAGCCGCAAGTGGAGAGGTCACCACGGG +
Preference number: 6 (lower is better)
Translates to: SSVQPGPTPARQ*TNSRKWRGHHG
Trigger: CCCGTGGTGACCTCTCCACTTGCGGCTGTTTGTCCACTGCCTGGCAGGGGTGGGACCTGGCTGCACGGATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS GCA 72 bp CCATGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTaGTGCGGAACTTCTTCCCGCTCGGGCTATAGTAAA +
Preference number: 6 (lower is better)
Translates to: PWSRPGSAPAAA*CGTSSRSGYSK
Trigger: TTTACTATAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS CAA 72 bp TTGCTGGGGTGGTTGGTAATCTTGGTCACCGGCTGCTaGAAGATGGACGCCGTCTGGCGCACGGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: LLGWLVILVTGC*KMDAVWRTGSA
Trigger: GGCGCTGCCCGTGCGCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CAA 72 bp GTCACCATGAAGGCTTTGCACAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTCTTCTCCACGGCGGCC +
Preference number: 6 (lower is better)
Translates to: VTMKALHRGCVV*SHTPGFFSTAA
Trigger: GGCCGCCGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000589064.5
ENST00000589901.2
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
CDS CAA 90 bp TCCTCGTCGGTCACCATGAAGGCTTTGCACAGGGGCTGCGTGGTGTaGAGCCATACGCCGGGGTTCTTCTCCACGGCGGCCGAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: SSSVTMKALHRGCVV*SHTPGFFSTAAESC
Trigger: ACAGCTCTCGGCCGCCGTGGAGAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000589064.5
ENST00000589901.2
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
CDS CAA 90 bp AGCTGGCGCGGCTGGTCCACCGCCTTCTGCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTAATCTTGGTCACCGGCTGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: SWRGWSTAFCGSLLT*LLGWLVILVTGCLK
Trigger: CTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCAGCCGCGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS GCA 72 bp TGGAGCCGCCCAGGTAGCGCGCCAGCTGCGGCTTGCTaGGGAACTTCTTCCCGCTCGGGCTATAGTAAAAGA +
Preference number: 6 (lower is better)
Translates to: WSRPGSAPAAAC*GTSSRSGYSKR
Trigger: TCTTTTACTATAGCCCGAGCGGGAAGAAGTTCCGCAGCAAGCCGCAGCTGGCGCGCTACCTGGGCGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434436.8
CDS CAA 72 bp GGCTGGTCCACCGCCTTCTGCGGGTCGCTCTTGACCTaGTTGCTGGGGTGGTTGGTAATCTTGGTCACCGGC +
Preference number: 6 (lower is better)
Translates to: GWSTAFCGSLLT*LLGWLVILVTG
Trigger: GCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CAA 90 bp TTGACCTTGTTGCTGGGGTGGTTGGTAATCTTGGTCACCGGCTGCTaGAAGATGGACGCCGTCTGGCGCACGGGCAGCGCCGTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LTLLLGWLVILVTGC*KMDAVWRTGSAVFR
Trigger: CCTGAACACGGCGCTGCCCGTGCGCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CAA 90 bp TGGCGCGGCTGGTCCACCGCCTTCTGCGGGTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTAATCTTGGTCACCGGCTGCTTGAAGATG +
Preference number: 6 (lower is better)
Translates to: WRGWSTAFCGSLLTL*LGWLVILVTGCLKM
Trigger: CATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCAGCCGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS GCA 72 bp TTGTTGCTGGGGTGGTTGGTAATCTTGGTCACCGGCTaGTTGAAGATGGACGCCGTCTGGCGCACGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LLLGWLVILVTG*LKMDAVWRTGS
Trigger: GCTGCCCGTGCGCCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CCA 72 bp TGCTCTCAGACACGGGGCTCTGCTCTCAGCCTGCCATaGACAAGCGCCGGCAACTCATCCTCTCCAGGACAT +
Preference number: 6 (lower is better)
Translates to: CSQTRGSALSLP*TSAGNSSSPGH
Trigger: ATGTCCTGGAGAGGATGAGTTGCCGGCGCTTGTCCATGGCAGGCTGAGAGCAGAGCCCCGTGTCTGAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CAA 72 bp TGGTCCACCGCCTTCTGCGGGTCGCTCTTGACCTTGTaGCTGGGGTGGTTGGTAATCTTGGTCACCGGCTGC +
Preference number: 6 (lower is better)
Translates to: WSTAFCGSLLTL*LGWLVILVTGC
Trigger: GCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CAA 90 bp TCCACCGCCTTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTGGTaGGTAATCTTGGTCACCGGCTGCTTGAAGATGGACGCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: STAFCGSLLTLLLGW*VILVTGCLKMDAVW
Trigger: CCAGACGGCGTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGCGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CAA 90 bp CACCAGCTCTTCCTGCTGATGTCCTCGTCGGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCGGGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: HQLFLLMSSSVTMKA*HRGCVVLSHTPGFF
Trigger: GAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGACATCAGCAGGAAGAGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589064.5
ENST00000592012.5
CDS GCA 72 bp AGTCGTAGCGCACGCGCTGGCGGCTCTTGTTCATCTTaGTCATCAGCATCTTGCCCGTGCGGAAGTCGAAGG +
Preference number: 6 (lower is better)
Translates to: SRSARAGGSCSS*SSASCPCGSRR
Trigger: CCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCGCCAGCGCGTGCGCTACGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS CAA 72 bp TGCTTCCTGATGTCCTCGTCGGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCG +
Preference number: 6 (lower is better)
Translates to: CFLMSSSVTMKA*HRGCVVLSHTP
Trigger: CGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGACATCAGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000589901.2
ENST00000590550.6
ENST00000590830.5
CDS CAA 72 bp TTCCTGCTGATGTCCTCGTCGGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCG +
Preference number: 6 (lower is better)
Translates to: FLLMSSSVTMKA*HRGCVVLSHTP
Trigger: CGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGACATCAGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589064.5
ENST00000592012.5
CDS CAA 90 bp AGCTCTTCCTGCTTCCTGATGTCCTCGTCGGTCACCATGAAGGCTTaGCACAGGGGCTGCGTGGTGTTGAGCCATACGCCGGGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSSCFLMSSSVTMKA*HRGCVVLSHTPGFF
Trigger: GAAGAACCCCGGCGTATGGCTCAACACCACGCAGCCCCTGTGCAAAGCCTTCATGGTGACCGACGAGGACATCAGGAAGCAGGAAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000589901.2
ENST00000590550.6
ENST00000590830.5
CDS GCA 72 bp GGCTCTTGTTCATCTTGCTCATCAGCATCTTGCCCGTaGGGAAGTCGAAGGTGCTCAGGTCCATGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: GSCSSCSSASCP*GSRRCSGPWSR
Trigger: GCGGCTCCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS GCA 72 bp GCTGGCGGCTCTTGTTCATCTTGCTCATCAGCATCTTaGCCGTGCGGAAGTCGAAGGTGCTCAGGTCCATGG +
Preference number: 6 (lower is better)
Translates to: AGGSCSSCSSAS*PCGSRRCSGPW
Trigger: CCATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCGCCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS GCA 72 bp CCAGACAGGCCACGGAAATGCCCCAAGAATGGGAGCTaGCACCTTCTTGGAAGGAACCCCAACTTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: PDRPRKCPKNGS*HLLGRNPNLGS
Trigger: GGAACCCAAGTTGGGGTTCCTTCCAAGAAGGTGGCAGCTCCCATTCTTGGGGCATTTCCGTGGCCTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CCA 72 bp CTGTGGCCCAGACAGGCCACGGAAATGCCCCAAGAATaGGAGCTGCCACCTTCTTGGAAGGAACCCCAACTT +
Preference number: 6 (lower is better)
Translates to: LWPRQATEMPQE*ELPPSWKEPQL
Trigger: AAGTTGGGGTTCCTTCCAAGAAGGTGGCAGCTCCCATTCTTGGGGCATTTCCGTGGCCTGTCTGGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CAA 72 bp CGCTGGCGGCTCTTGTTCATCTTGCTCATCAGCATCTaGCCCGTGCGGAAGTCGAAGGTGCTCAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: RWRLLFILLISI*PVRKSKVLRSM
Trigger: CATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGAGCAAGATGAACAAGAGCCGCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000592012.5
ENST00000592361.2
ENST00000592965.2
CDS CCA 72 bp GCCTTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTaGTTGGTAATCTTGGTCACCGGCTGCTTGAAGATG +
Preference number: 6 (lower is better)
Translates to: AFCGSLLTLLLG*LVILVTGCLKM
Trigger: CATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS TCA 72 bp CCAGAAGGTGGAAGCAGCCCAGACGCCTTCAATGGATaGACGGACAAACGCCCATCCACACGATGGGACATA +
Preference number: 6 (lower is better)
Translates to: PEGGSSPDAFNG*TDKRPSTRWDI
Trigger: TATGTCCCATCGTGTGGATGGGCGTTTGTCCGTTCATCCATTGAAGGCGTCTGGGCTGCTTCCACCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS TCA 72 bp CCCGGCCACGCCACTCTTAGGTATCTGCCCGAAAAATaGGCACGCATCCACACCATCACTTCTACACGGATG +
Preference number: 6 (lower is better)
Translates to: PGHATLRYLPEK*ARIHTITSTRM
Trigger: CATCCGTGTAGAAGTGATGGTGTGGATGCGTGCTCATTTTTCGGGCAGATACCTAAGAGTGGCGTGGCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CAA 72 bp TTCTGCGGGTCGCTCTTGACCTTGTTGCTGGGGTGGTaGGTAATCTTGGTCACCGGCTGCTTGAAGATGGAC +
Preference number: 6 (lower is better)
Translates to: FCGSLLTLLLGW*VILVTGCLKMD
Trigger: GTCCATCTTCAAGCAGCCGGTGACCAAGATTACCAACCACCCCAGCAACAAGGTCAAGAGCGACCCGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000156825.5
ENST00000434436.8
ENST00000585967.5
ENST00000589064.5
ENST00000590550.6
ENST00000590830.5
ENST00000592012.5
ENST00000592361.2
CDS CAA 90 bp CCGGCAACTCATCCTCTCCAGGACATAAGGACACCCACCAATGGGTaGCCCTGTGTGTCACATGAGGTCACACTACAGGATGACAAGCAC +
Preference number: 6 (lower is better)
Translates to: PATHPLQDIRTPTNG*PCVSHEVTLQDDKH
Trigger: GTGCTTGTCATCCTGTAGTGTGACCTCATGTGACACACAGGGCAACCCATTGGTGGGTGTCCTTATGTCCTGGAGAGGATGAGTTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CAA 72 bp CATCCTCTCCAGGACATAAGGACACCCACCAATGGGTaGCCCTGTGTGTCACATGAGGTCACACTACAGGAT +
Preference number: 6 (lower is better)
Translates to: HPLQDIRTPTNG*PCVSHEVTLQD
Trigger: ATCCTGTAGTGTGACCTCATGTGACACACAGGGCAACCCATTGGTGGGTGTCCTTATGTCCTGGAGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CCA 72 bp ATGGGAGCTGCCACCTTCTTGGAAGGAACCCCAACTTaGGTTCCATTTCTAAATTCCCTCTCCCGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: MGAATFLEGTPT*VPFLNSLSRLC
Trigger: ACACAAGCGGGAGAGGGAATTTAGAAATGGAACCCAAGTTGGGGTTCCTTCCAAGAAGGTGGCAGCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CAA 72 bp AATGGGAGCTGCCACCTTCTTGGAAGGAACCCCAACTaGGGTTCCATTTCTAAATTCCCTCTCCCGCTTGTG +
Preference number: 6 (lower is better)
Translates to: NGSCHLLGRNPN*GSISKFPLPLV
Trigger: CACAAGCGGGAGAGGGAATTTAGAAATGGAACCCAAGTTGGGGTTCCTTCCAAGAAGGTGGCAGCTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CAA 90 bp TGCCCCAAGAATGGGAGCTGCCACCTTCTTGGAAGGAACCCCAACTaGGGTTCCATTTCTAAATTCCCTCTCCCGCTTGTGTTACTACAT +
Preference number: 6 (lower is better)
Translates to: CPKNGSCHLLGRNPN*GSISKFPLPLVLLH
Trigger: ATGTAGTAACACAAGCGGGAGAGGGAATTTAGAAATGGAACCCAAGTTGGGGTTCCTTCCAAGAAGGTGGCAGCTCCCATTCTTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589901.2
CDS CAA 90 bp CACTACAGGATGACAAGCACCCAACCCAACACACCGTCATCATGGTaGGGATGTAAGATGGAACAGCCATGTTGGAAAAGCCTGACAGCT +
Preference number: 6 (lower is better)
Translates to: HYRMTSTQPNTPSSW*GCKMEQPCWKSLTA
Trigger: AGCTGTCAGGCTTTTCCAACATGGCTGTTCCATCTTACATCCCAACCATGATGACGGTGTGTTGGGTTGGGTGCTTGTCATCCTGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592361.2
CDS CCA 72 bp AGGATGACAAGCACCCAACCCAACACACCGTCATCATaGTTGGGATGTAAGATGGAACAGCCATGTTGGAAA +
Preference number: 6 (lower is better)
Translates to: RMTSTQPNTPSS*LGCKMEQPCWK
Trigger: TTTCCAACATGGCTGTTCCATCTTACATCCCAACCATGATGACGGTGTGTTGGGTTGGGTGCTTGTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592361.2