RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MBD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141644

Ensembl transcript IDs: ENST00000269468.10, ENST00000269468.9, ENST00000269471.9, ENST00000339998.10, ENST00000347968.7, ENST00000353909.7, ENST00000382948.9, ENST00000398488.5, ENST00000398493.5, ENST00000398495.6, ENST00000457839.6, ENST00000585595.5, ENST00000585672.5, ENST00000586118.5, ENST00000586679.1, ENST00000586884.1, ENST00000587605.5, ENST00000588937.5, ENST00000589541.5, ENST00000589733.1, ENST00000589758.1, ENST00000589867.2, ENST00000590208.5, ENST00000590215.1, ENST00000591416.5, ENST00000591535.5, ENST00000591661.1, ENST00000592060.5

Found 1835 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCACTCTGGGGTCCAACCTGACGTTTCCGAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGC +
Preference number: 1 (lower is better)
Translates to: TTLGSNLTFPSLGWP*RLLSLLAGNRHGMG
Trigger: GCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR GCA 90 bp GACGTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACA +
Preference number: 1 (lower is better)
Translates to: DVSESWLALKASFAS*WQPPRDGPWGLDST
Trigger: TGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR GCA 90 bp GATCACCTCGTTGGTGTGGGCAGTAGTCAGGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTA +
Preference number: 1 (lower is better)
Translates to: DHLVGVGSSQACSQA*SCSTFPRIILSASL
Trigger: TAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGCCTGACTACTGCCCACACCAACGAGGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR GCA 90 bp CCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTaGGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAA +
Preference number: 1 (lower is better)
Translates to: PLPLPPASQSVGITG*ATARGRKYLTGLIE
Trigger: TTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CCA 90 bp GTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGA +
Preference number: 1 (lower is better)
Translates to: VSESWLALKASFASC*QPPRDGPWGLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR TCA 90 bp CCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCT +
Preference number: 1 (lower is better)
Translates to: PASSAGHPHHRSWRW*ETDMGSRPSSWVPA
Trigger: AGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR TCA 90 bp GCAGGACTCGAAGCAGGAATTCAGCCTCCTAGAACACATTCAGGCTaGGGGCAGGAGCCAAGCACAAAGGTGATCACAGGGCAGGAGATG +
Preference number: 1 (lower is better)
Translates to: AGLEAGIQPPRTHSG*GQEPSTKVITGQEM
Trigger: CATCTCCTGCCCTGTGATCACCTTTGTGCTTGGCTCCTGCCCTCAGCCTGAATGTGTTCTAGGAGGCTGAATTCCTGCTTCGAGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR TCA 90 bp CTCCTAGAACACATTCAGGCTGAGGGCAGGAGCCAAGCACAAAGGTaGTCACAGGGCAGGAGATGCACGTTGTCAGGAAAGATGAGCCAG +
Preference number: 1 (lower is better)
Translates to: LLEHIQAEGRSQAQR*SQGRRCTLSGKMSQ
Trigger: CTGGCTCATCTTTCCTGACAACGTGCATCTCCTGCCCTGTGATCACCTTTGTGCTTGGCTCCTGCCCTCAGCCTGAATGTGTTCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR GCA 90 bp GCAGCACCTGGGGTCTGCAGGAAACCCAGTTTCTGTATGAACAGATaGTCTGACAAGGTGACCCCATCTACATTGAGCCTTGGCACTCCC +
Preference number: 1 (lower is better)
Translates to: AAPGVCRKPSFCMNR*SDKVTPSTLSLGTP
Trigger: GGGAGTGCCAAGGCTCAATGTAGATGGGGTCACCTTGTCAGAGCATCTGTTCATACAGAAACTGGGTTTCCTGCAGACCCCAGGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR GCA 90 bp GTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTCAAGCTCCAGCATTAGATGCAAAGACA +
Preference number: 1 (lower is better)
Translates to: VSSVSHTLHPSSLPE*LPCRLQAPALDAKT
Trigger: TGTCTTTGCATCTAATGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR TCA 90 bp AAGATGAGCCAGGCTGGCAGCTTTAGTTACAAAGACTGCTCTGGCTaGAGAGGGGGAGTCAGGGTAACAAGCAAAATGGACAGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: KMSQAGSFSYKDCSG*RGGVRVTSKMDSSQ
Trigger: CTGGCTGCTGTCCATTTTGCTTGTTACCCTGACTCCCCCTCTTCAGCCAGAGCAGTCTTTGTAACTAAAGCTGCCAGCCTGGCTCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR TCA 90 bp ACCTGGGGTCTGCAGGAAACCCAGTTTCTGTATGAACAGATGCTCTaGCAAGGTGACCCCATCTACATTGAGCCTTGGCACTCCCTAAAC +
Preference number: 1 (lower is better)
Translates to: TWGLQETQFLYEQML*QGDPIYIEPWHSLN
Trigger: GTTTAGGGAGTGCCAAGGCTCAATGTAGATGGGGTCACCTTGTCAGAGCATCTGTTCATACAGAAACTGGGTTTCCTGCAGACCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR TCA 90 bp CACAAAGGTGATCACAGGGCAGGAGATGCACGTTGTCAGGAAAGATaGGCCAGGCTGGCAGCTTTAGTTACAAAGACTGCTCTGGCTGAA +
Preference number: 1 (lower is better)
Translates to: HKGDHRAGDARCQER*ARLAALVTKTALAE
Trigger: TTCAGCCAGAGCAGTCTTTGTAACTAAAGCTGCCAGCCTGGCTCATCTTTCCTGACAACGTGCATCTCCTGCCCTGTGATCACCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR GCA 90 bp GTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTaGAGACTTCAAGCTCCAGCATTAGATGCAAAGACAACAGCCTTA +
Preference number: 1 (lower is better)
Translates to: VSHTLHPSSLPECLP*RLQAPALDAKTTAL
Trigger: TAAGGCTGTTGTCTTTGCATCTAATGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR GCA 90 bp ATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTaGAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAA +
Preference number: 1 (lower is better)
Translates to: IQAEQETQIREPGRT*STGGNHSCISSQEQ
Trigger: TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTC +
Preference number: 1 (lower is better)
Translates to: LLHLPQDHPFSFSNS*ARCIFNSVRKGTSF
Trigger: GAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
3UTR CCA 90 bp GCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTaGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATACT +
Preference number: 1 (lower is better)
Translates to: AGLPKCWNYRVRYRA*PQISYRVDRIASNT
Trigger: AGTATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR TCA 90 bp GATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTaGAGCAGCAGCACATTGTTTTTACACTTGGAAGGTTGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: DGPQETFCLITGGRK*SSSTLFLHLEGWCW
Trigger: CCAGCACCAACCTTCCAAGTGTAAAAACAATGTGCTGCTGCTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR GCA 90 bp CTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGG +
Preference number: 1 (lower is better)
Translates to: LPQDHPFSFSNSWAR*IFNSVRKGTSFFCR
Trigger: CCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
3UTR GCA 90 bp ATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTaGATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACA +
Preference number: 1 (lower is better)
Translates to: IREPGRTCSTGGNHS*ISSQEQGGNTLNPT
Trigger: TGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
3UTR TCA 90 bp CTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTaGGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGA +
Preference number: 1 (lower is better)
Translates to: LSASLIPGPDAYLTL*GRAPASSAGHPHHR
Trigger: TCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR CCA 90 bp CCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: PAPPPLKSNFLYSGS*GGEDAPTFYSFSSF
Trigger: AAAGGAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR GCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCAGCGATCCTCCCCACTaGCCCTCCCGCCGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: LGLSLQSIWDYKACATTPSDPPH*PSRRPP
Trigger: GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCT...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR TCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCCCAGTAACTGGTTTCTaGGAATCAGGATCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPPVTGF*ESGSRQ
Trigger: CTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGG...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCGGACTAGTGGGGCAGTaGCACGACCTGGTGGAGCAT +
Preference number: 2 (lower is better)
Translates to: LGLSLQSIWDYKACATTPGLVGQ*HDLVEH
Trigger: ATGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCC...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR TCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAACCAGTAACTGGTTTCTaGGAATCAGGATCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQPVTGF*ESGSRQ
Trigger: CTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGG...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR GCA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTCCCGAGTGCCTGCCCTaGAGACTTCAAGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTPECLP*RLQAPA
Trigger: TGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGG...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAGGACTAGTGGGGCAGTaGCACGACCTGGTGGAGCAT +
Preference number: 2 (lower is better)
Translates to: PASQSVGITGCATARGRKGLVGQ*HDLVEH
Trigger: ATGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCC...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 90 bp TCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTaGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATATCTTA +
Preference number: 2 (lower is better)
Translates to: SSDPPHCPSRRPPKV*ELQGALPRVAANIL
Trigger: TAAGATATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp CCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACTGGAACTCCTGCTCCTaGGTTCAAGCGATCCTCCCC +
Preference number: 2 (lower is better)
Translates to: PPGPQPPEYLGLQSLRHHWNSCS*VQAILP
Trigger: GGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCA...GTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCTGGAACTCCTGCTCCTaGGTTCAAGCGATCCTCCCC +
Preference number: 2 (lower is better)
Translates to: VLLGLSLQSIWDYKACATWNSCS*VQAILP
Trigger: GGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCA...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 90 bp CACCACTCTGGGGTCCAACCTGACGTTTCCGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGG +
Preference number: 2 (lower is better)
Translates to: HHSGVQPDVSESWLA*KASFASCWQPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR-3UTR GCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGAA +
Preference number: 2 (lower is better)
Translates to: ETDMGSRPSSWVPARARGSSLPE*LPCRLE
Trigger: TTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR CCA 90 bp CCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACTGGGGGCAGATCAAATaGACTAGTGGGGCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: PPGPQPPEYLGLQSLRHHWGQIK*TSGAVA
Trigger: TGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCA...GTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 90 bp AACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGTGAGATCACACGCAGGGCCCAGGTA +
Preference number: 2 (lower is better)
Translates to: NRHGMGLGGWIAQDA*FEVEEGEITRRAQV
Trigger: TACCTGGGCCCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 2 (lower is better)
Translates to: STFPRIILSASLIPGPDAACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CCA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGACCAGGGTCAGGATGTaGATCAGAAGTCCAGTAACT +
Preference number: 2 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWTRVRM*IRSPVT
Trigger: AGTTACTGGACTTCTGATCCACATCCTGACCCTGGT...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACATGGGGGCAGATCAAATaGACTAGTGGGGCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: KRSSPLPLPPASQSVGITWGQIK*TSGAVA
Trigger: TGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCA...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR TCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGAAAGACTGCTCTGGCTaGAGAGGGGGAGTCAGGGTA +
Preference number: 2 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWKDCSG*RGGVRV
Trigger: TACCCTGACTCCCCCTCTTCAGCCAGAGCAGTCTTT...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 2 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGCAGAAGTCCAGTAACTaGTTTCTGAGAATCAGGATC +
Preference number: 2 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKQKSSN*FLRIRI
Trigger: GATCCTGATTCTCAGAAACCAGTTACTGGACTTCTG...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCAGTGGCACGACCTGGTaGAGCATAATTAAGAGTCTG +
Preference number: 2 (lower is better)
Translates to: SSPLPLPPASQSVGITGCSGTTW*SIIKSL
Trigger: CAGACTCTTAATTATGCTCCACCAGGTCGTGCCACT...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTCAA +
Preference number: 2 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCSSLPE*LPCRLQ
Trigger: TTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAACCAGGGTCAGGATGTaGATCAGAAGTCCAGTAACT +
Preference number: 2 (lower is better)
Translates to: PASQSVGITGCATARGRKTRVRM*IRSPVT
Trigger: AGTTACTGGACTTCTGATCCACATCCTGACCCTGGT...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAACAGGATATCCTAGGATaGGGGCAGATCAAATGGACT +
Preference number: 2 (lower is better)
Translates to: PASQSVGITGCATARGRKQDILG*GQIKWT
Trigger: AGTCCATTTGATCTGCCCCCATCCTAGGATATCCTG...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCCTTCCTATTTGCCATTaGCAGAAACCAGGGCTTAGA +
Preference number: 2 (lower is better)
Translates to: SSPLPLPPASQSVGITGCLPICH*QKPGLR
Trigger: TCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAG...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR TCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 2 (lower is better)
Translates to: SCSTFPRIILSASLIPGPRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR TCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 2 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGSSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCCCGAGTGCCTGCCCTaGAGACTTGAATCCTACAGT +
Preference number: 2 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVPECLP*RLESYS
Trigger: ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGG...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
3UTR-3UTR GCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 2 (lower is better)
Translates to: VRWATRDILLDNRRAEVKSQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 2 (lower is better)
Translates to: IVILSYPQVSSETLGSGFACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACCCGAGTGCCTGCCCTaGAGACTTGAATCCTACAGT +
Preference number: 2 (lower is better)
Translates to: SCSTFPRIILSASLIPGPPECLP*RLESYS
Trigger: ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR CCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATAAGTGGCACGACCTGGTaGAGCATAATTAAGAGTCTG +
Preference number: 2 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQISGTTW*SIIKSL
Trigger: CAGACTCTTAATTATGCTCCACCAGGTCGTGCCACT...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR TCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR TCA 90 bp GGAGGCACACAGGATACAAAGTTTAAGGAGGCACTCACTCAGTCCTGGCCCTGTCGTTGTCAGGAAAGATaGGCCAGGCTGGCAGCTTTA +
Preference number: 2 (lower is better)
Translates to: GGTQDTKFKEALTQSWPCRCQER*ARLAAL
Trigger: TAAAGCTGCCAGCCTGGCTCATCTTTCCTGACAACG...ACAGGGCCAGGACTGAGTGAGTGCCTCCTTAAACTTTGTATCCTGTGTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 2 (lower is better)
Translates to: IVILSYPQVSSETLGSGFSQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 2 (lower is better)
Translates to: HRISVLAGITMKSMVFSFACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACCTGCCCTGCAGACTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: STFPRIILSASLIPGPDAPALQT*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR TCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCTGCAAATATCACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLELQISP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTGATATTTGCAG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCCCCGAGTGCCTGCCCTaGAGACTTGAATCCTACAGT +
Preference number: 2 (lower is better)
Translates to: IVILSYPQVSSETLGSGFPECLP*RLESYS
Trigger: ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGG...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR GCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR GCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 2 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVSQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 2 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR GCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGTTGCAGTTCACACGTTaGCATGTATCTGCTAGATCA +
Preference number: 2 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLLQFTR*HVSARS
Trigger: TGATCTAGCAGATACATGGCAACGTGTGAACTGCAA...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR GCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGCCCGAGTGCCTGCCCTaGAGACTTCAAGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLPECLP*RLQAPA
Trigger: TGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGG...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGTCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 2 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATGGCAGTGGCACGACCTaGTGGAGCATAATTAAGAGT +
Preference number: 2 (lower is better)
Translates to: RYRAWPQISYRVDRIASNGSGTT*WSIIKS
Trigger: ACTCTTAATTATGCTCCACCAGGTCGTGCCACTGCC...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR GCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTCAA +
Preference number: 2 (lower is better)
Translates to: RISVLAGITMKSMVFSFASSLPE*LPCRLQ
Trigger: TTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR-3UTR TCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCTCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 2 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSSSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR TCA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCAAGGTGGTAATACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: RIRIQAEQETQIREPGRTKVVIP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTATTACCACCTT...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
3UTR-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCCCGAGTGCCTGCCCTaGAGACTTGAATCCTACAGT +
Preference number: 2 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSPECLP*RLESYS
Trigger: ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR GCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 2 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 2 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCA +
Preference number: 2 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLLYSGS*GGEDAP
Trigger: TGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAA...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR CCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATGGCAGTGGCACGACCTaGTGGAGCATAATTAAGAGT +
Preference number: 2 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNGSGTT*WSIIKS
Trigger: ACTCTTAATTATGCTCCACCAGGTCGTGCCACTGCC...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 90 bp GAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTC +
Preference number: 2 (lower is better)
Translates to: EIHGLQLCIFSHIVI*SYPQVSSETLGSGF
Trigger: GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR TCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCACCTGCCCTGCAGACTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: RISVLAGITMKSMVFSFAPALQT*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGG...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR TCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 2 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR TCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCTCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 2 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFSSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 2 (lower is better)
Translates to: SSALHFQPHSYIELSSGEGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCA +
Preference number: 2 (lower is better)
Translates to: EVCRDTARSHPEATYNYSLYSGS*GGEDAP
Trigger: TGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAA...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR CCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATCAGGATATCCTAGGATaGGGGCAGATCAAATGGACT +
Preference number: 2 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNQDILG*GQIKWT
Trigger: AGTCCATTTGATCTGCCCCCATCCTAGGATATCCTG...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR-3UTR TCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACCTGCCCTGCAGACTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSPALQT*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR TCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGTGGTTCTGCTCCTCTaGTTGTACCCTAACATAAAT +
Preference number: 2 (lower is better)
Translates to: SRNSLPVRWATRDILLDNVVLLL*LYPNIN
Trigger: ATTTATGTTAGGGTACAATCAGAGGAGCAGAACCAC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCAGCTCCAGCATTAGATaGAAAGACAACAGCCTTACA +
Preference number: 2 (lower is better)
Translates to: IVILSYPQVSSETLGSGFSSSIR*KDNSLT
Trigger: TGTAAGGCTGTTGTCTTTGCATCTAATGCTGGAGCT...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR-3UTR TCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCAAATATCACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQALQISP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTGATATTTGCAG...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR CAA 90 bp AAGCTGGGTTTGAGTCTAGGCTCTACTAACACCAGCTGTTCGACATaGGACAAATTAATGAGTCTCAGTTTTCCCATCCACATAAATGGA +
Preference number: 2 (lower is better)
Translates to: KLGLSLGSTNTSCST*DKLMSLSFPIHING
Trigger: TCCATTTATGTGGATGGGAAAACTGAGACTCATTAATTTGTCCAATGTCGAACAGCTGGTGTTAGTAGAGCCTAGACTCAAACCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR GCA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR GCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTGCAGTTCACACGTTaGCATGTATCTGCTAGATCA +
Preference number: 2 (lower is better)
Translates to: RISVLAGITMKSMVFSFALQFTR*HVSARS
Trigger: TGATCTAGCAGATACATGGCAACGTGTGAACTGCAA...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 2 (lower is better)
Translates to: GLHRISVLAGITMKSMVFSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 2 (lower is better)
Translates to: LAGITMKSMVFSFAFSATSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: HRISVLAGITMKSMVFSFHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTAGCTCCAGCATTAGATaGAAAGACAACAGCCTTACA +
Preference number: 2 (lower is better)
Translates to: HRISVLAGITMKSMVFSFSSSIR*KDNSLT
Trigger: TGTAAGGCTGTTGTCTTTGCATCTAATGCTGGAGCT...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR-3UTR TCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCTTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTTGCAGTTCACACGTTaGCATGTATCTGCTAGATCA +
Preference number: 2 (lower is better)
Translates to: SSALHFQPHSYIELSSGELQFTR*HVSARS
Trigger: TGATCTAGCAGATACATGGCAACGTGTGAACTGCAA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR GCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCTTCCAATTCCTACTGTaGCCCAAACAAGGTTCACAA +
Preference number: 2 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSFQFLL*PKQGSQ
Trigger: TTGTGAACCTTGTTTGGGGCACAGTAGGAATTGGAA...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 2 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCATCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 2 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSASLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR CAA 90 bp ATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTaGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGC +
Preference number: 2 (lower is better)
Translates to: IQKPLTITHEHGLFR*FCGGFNYITFLQPS
Trigger: GCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR CAA 90 bp CCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTaGTTTAGGTTGTTTTGTGGTGGCTTTAATTATATTACCTTTCTC +
Preference number: 2 (lower is better)
Translates to: PGLIQKPLTITHEHG*FRLFCGGFNYITFL
Trigger: GAGAAAGGTAATATAATTAAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR TCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTCTGCAAATATCACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFLQISP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTGATATTTGCAG...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR GCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR-3UTR CCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGTCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 2 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR GCA 72 bp GAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGATGGGCCTTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: ESWLALKASFAS*WQPPRDGPWGL
Trigger: CAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR GCA 72 bp CTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTaGGCTACCGCGCGTGGCCGCAAATATCTTACAGGG +
Preference number: 3 (lower is better)
Translates to: LPPASQSVGITG*ATARGRKYLTG
Trigger: CCCTGTAAGATATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR GCA 72 bp GAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTaGCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTA +
Preference number: 3 (lower is better)
Translates to: ELLLLGSSDPPH*PSRRPPKVLEL
Trigger: TAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CCA 72 bp TCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGGCCTTGGGGGCTGGAT +
Preference number: 3 (lower is better)
Translates to: SWLALKASFASC*QPPRDGPWGLD
Trigger: ATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR TCA 72 bp GCCTCCTTCCTGACCTCACCACTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTC +
Preference number: 3 (lower is better)
Translates to: ASFLTSPLWGPT*RFRVLAGLEGF
Trigger: GAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAGTGGTGAGGTCAGGAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR TCA 72 bp ACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTaGCATGGGTTCCAGGCCATCCTCGTGGGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: TPTSSKLEVVRD*HGFQAILVGSS
Trigger: GCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR TCA 72 bp GGGTCCAACCTGACGTTTCCGAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCAC +
Preference number: 3 (lower is better)
Translates to: GSNLTFPSLGWP*RLLSLLAGNRH
Trigger: GTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTCAGGTTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR CCA 72 bp CACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATaGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTG +
Preference number: 3 (lower is better)
Translates to: HIIEAGGGERLT*VPGHPRGFQLV
Trigger: CACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR CCA 72 bp CACCACTCTGGGGTCCAACCTGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: HHSGVQPDVSES*LALKASFASCW
Trigger: CCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR CCA 72 bp GAATTGGGAGAGAGTGAGGTAGGGCTGAGCCAAGACTaGCTCTTGGGCAGGACTCGAAGCAGGAATTCAGCC +
Preference number: 3 (lower is better)
Translates to: ELGESEVGLSQD*LLGRTRSRNSA
Trigger: GGCTGAATTCCTGCTTCGAGTCCTGCCCAAGAGCCAGTCTTGGCTCAGCCCTACCTCACTCTCTCCCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
3UTR-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 3 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR TCA 72 bp CACATTCAGGCTGAGGGCAGGAGCCAAGCACAAAGGTaGTCACAGGGCAGGAGATGCACGTTGTCAGGAAAG +
Preference number: 3 (lower is better)
Translates to: HIQAEGRSQAQR*SQGRRCTLSGK
Trigger: CTTTCCTGACAACGTGCATCTCCTGCCCTGTGATCACCTTTGTGCTTGGCTCCTGCCCTCAGCCTGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
3UTR-3UTR CAA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCAGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp GTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGACACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 3 (lower is better)
Translates to: VLAGLEGFFRFLLATATGHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR TCA 72 bp GACAGCAGCCAGTGGGGAGATATATCCTGTAGGGTTTaGGGAATCCTATGCAGCACCTGGGGTCTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: DSSQWGDISCRV*GILCSTWGLQE
Trigger: TTCCTGCAGACCCCAGGTGCTGCATAGGATTCCTCAAACCCTACAGGATATATCTCCCCACTGGCTGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CAA 90 bp GTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGAATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 3 (lower is better)
Translates to: VLAGLEGFFRFLLATATGIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
3UTR GCA 72 bp GTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTCAAGCTCCAGCATTAGAT +
Preference number: 3 (lower is better)
Translates to: VSHTLHPSSLPE*LPCRLQAPALD
Trigger: ATCTAATGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
3UTR GCA 72 bp AAACAAATTTTGAAGAGACAGGGGGTCCCGCTATGTTaGTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCG +
Preference number: 3 (lower is better)
Translates to: KQILKRQGVPLC*SGWNSCSWVQA
Trigger: CGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAGCAACATAGCGGGACCCCCTGTCTCTTCAAAATTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR TCA 72 bp GATCACAGGGCAGGAGATGCACGTTGTCAGGAAAGATaGGCCAGGCTGGCAGCTTTAGTTACAAAGACTGCT +
Preference number: 3 (lower is better)
Translates to: DHRAGDARCQER*ARLAALVTKTA
Trigger: AGCAGTCTTTGTAACTAAAGCTGCCAGCCTGGCTCATCTTTCCTGACAACGTGCATCTCCTGCCCTGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR GCA 72 bp ATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTaGAGGACACCCACATCATCGAAGCTGGAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: IFNSVRKGTSFF*RTPTSSKLEVV
Trigger: CACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR GCA 72 bp GAACAGGAAACACAAATCAGGGAACCAGGACGGACCTaGAGCACAGGTGGTAACCACAGTTGCATTTCCAGT +
Preference number: 3 (lower is better)
Translates to: EQETQIREPGRT*STGGNHSCISS
Trigger: ACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
3UTR-3UTR CAA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCACAAGGTGGTAATACCTaGAATCCTACAGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPQGGNT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTATTACCACCTTG...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
3UTR TCA 72 bp TCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTaGGGAAGGGCACCAGCTTCTTCTGCAGGACACCCA +
Preference number: 3 (lower is better)
Translates to: SLIPGPDAYLTL*GRAPASSAGHP
Trigger: TGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
3UTR TCA 72 bp CCACATAGTTATATTGAGTTATCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATTCATGGTAGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: PHSYIELSSGEQ*DPWERIHGRVA
Trigger: AGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR TCA 72 bp CTGCAGGAAACCCAGTTTCTGTATGAACAGATGCTCTaGCAAGGTGACCCCATCTACATTGAGCCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: LQETQFLYEQML*QGDPIYIEPWH
Trigger: GTGCCAAGGCTCAATGTAGATGGGGTCACCTTGTCAGAGCATCTGTTCATACAGAAACTGGGTTTCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR GCA 72 bp GGGGTCTGCAGGAAACCCAGTTTCTGTATGAACAGATaGTCTGACAAGGTGACCCCATCTACATTGAGCCTT +
Preference number: 3 (lower is better)
Translates to: GVCRKPSFCMNR*SDKVTPSTLSL
Trigger: AAGGCTCAATGTAGATGGGGTCACCTTGTCAGAGCATCTGTTCATACAGAAACTGGGTTTCCTGCAGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CAA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: SLPVRWATRDILLDNRRATLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: VRWATRDILLDNRRAEVKTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGCCTAGTAGATCAGTGTaGTCTCTCATAAAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGPSRSV*SLIKPV
Trigger: GACTGGCTTTATGAGAGACAACACTGATCTACTAGG...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR CCA 72 bp CTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAACTCTGTGAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LPQDHPFSFSNS*ARCIFNSVRKG
Trigger: GCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269468.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: SSALHFQPHSYIELSSGEGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 3 (lower is better)
Translates to: SSALHFQPHSYIELSSGEFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGCATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 3 (lower is better)
Translates to: VRWATRDILLDNRRAEVKHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp CCAGAATACTGGGGTTGGGTGGTTGGTTCCTGGGGGAAACAAAGCAGTATCAGTCATGGCTTGTTTAGGTaGTTTTGTGGTGGCTTTAAT +
Preference number: 3 (lower is better)
Translates to: PEYWGWVVGSWGKQSSISHGLFR*FCGGFN
Trigger: ATTAAAGCCACCACAAAACAACCTAAACAAGCCATG...ACTGATACTGCTTTGTTTCCCCCAGGAACCAACCACCCAACCCCAGTATTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CAA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATTTTTCCTCCTAGGGTaGATTCACACACAAGCCCTG +
Preference number: 3 (lower is better)
Translates to: EVCRDTARSHPEATYNYSFFLLG*IHTQAL
Trigger: CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAA...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR TCA 72 bp CAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTaGAGCAGCAGCACATTGTTTTTACACTTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: QETFCLITGGRK*SSSTLFLHLEG
Trigger: ACCTTCCAAGTGTAAAAACAATGTGCTGCTGCTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCACCTAGTAGATCAGTGTaGTCTCTCATAAAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: EVCRDTARSHPEATYNYSPSRSV*SLIKPV
Trigger: GACTGGCTTTATGAGAGACAACACTGATCTACTAGG...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR CCA 72 bp CCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCAACTTTCTACTCTTTC +
Preference number: 3 (lower is better)
Translates to: PPLKSNFLYSGS*GGEDAPTFYSF
Trigger: GAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR CAA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269468.9
ENST00000347968.7
ENST00000353909.7
3UTR-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: HRISVLAGITMKSMVFSFTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCTCTGCAAATATCACCTaGAATCCTACAGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQASANIT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTGATATTTGCAGA...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR-3UTR CAA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTCTGCAAATATCACCTaGAATCCTACAGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLSANIT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTGATATTTGCAGA...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
3UTR TCA 72 bp GGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATaGAATCCATGGTCTTCAGCTTTGCATTTTCAGCCA +
Preference number: 3 (lower is better)
Translates to: GFIESLYLLESP*NPWSSALHFQP
Trigger: TGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGC +
Preference number: 3 (lower is better)
Translates to: RISVLAGITMKSMVFSFASHIVI*SYPQVS
Trigger: GCTCACCTGAGGATAACTCAATATAACTATGTGGCT...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
3UTR-3UTR CAA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATACCTAGTAGATCAGTGTaGTCTCTCATAAAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSIPSRSV*SLIKPV
Trigger: GACTGGCTTTATGAGAGACAACACTGATCTACTAGG...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR-3UTR CAA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACCAGCTGTTCGACATaGGACAAATTAATGAGTCTC +
Preference number: 3 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSTSCST*DKLMSL
Trigger: GAGACTCATTAATTTGTCCAATGTCGAACAGCTGGT...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
3UTR TCA 72 bp ATATACATAATCTTTATCTTAGTGGTTCTGCTCCTCTaGTTGTACCCTAACATAAATGGTCAGCAGAAGCTT +
Preference number: 3 (lower is better)
Translates to: IYIIFILVVLLL*LYPNINGQQKL
Trigger: AAGCTTCTGCTGACCATTTATGTTAGGGTACAATCAGAGGAGCAGAACCACTAAGATAAAGATTATGTATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAGCGATCCTCCCCACTaGCCCTCCCGCCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPSDPPH*PSRRPP
Trigger: GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCT...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCAGCGATCCTCCCCACTaGCCCTCCCGCCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSSDPPH*PSRRPP
Trigger: GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCT...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR TCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR TCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAACTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR TCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGGTGATCATGGCTCCCTaGAGCCTCGTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKVIMAP*SLVLLG
Trigger: GCCCAGGAGGACGAGGCTGCAGGGAGCCATGATCAC...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAACAGGGTGGAGTGCAGTaGCGTGATCATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQQGGVQ*RDHGSL
Trigger: CAGGGAGCCATGATCACGCCACTGCACTCCACCCTG...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp GGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTCGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GNRHGMGLGGWIAQDALFRGRLL*SGSCRL
Trigger: GAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCG...AAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGGGGGTCCCGCTATGTTaGTCAGGCTGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKGVPLC*SGWNSC
Trigger: GCAGGAGTTCCAGCCTGAGCAACATAGCGGGACCCC...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGARGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAACACAGAAGGCAGGCCTaGGTCTACTGCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQHRRQA*VYCLQQ
Trigger: CTGTTGCAGGCAGTAGACCCAGGCCTGCCTTCTGTG...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS-3UTR TCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEGEGPS*TSRLAL
Trigger: GAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCACACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp CCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: PPGPQPPEYLGLQSLRHHTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...GTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAATGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGCCTCCAGAGTATCTaGGACTACAAAGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQSLQSI*DYKACA
Trigger: GGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCT...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACATCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAACTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCAGGGTGGAGTGCAGTaGCGTGATCATGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSQGGVQ*RDHGSL
Trigger: CAGGGAGCCATGATCACGCCACTGCACTCCACCCTG...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSLLAGNRHGMGLGGWIALVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...TGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGGEGPS*TSRLAL
Trigger: GAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QNRKHKSGNQDGPAAQVVGEGPS*TSRLAL
Trigger: GAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCC...TACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCAGCACCTGCGCACTATTaGCTCGATGTCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSLLAGNRHGMGLGGWIAAPAHY*LDVACP
Trigger: AGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGC...TGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR GCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCGAACCAGGACGGACCTaGAGCACAGGTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPEPGRT*STGGNH
Trigger: GTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCCCACAGCCAGGGGAGTaGGTCGCTGACATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPPQPGE*VADISD
Trigger: ATCAGAGATGTCAGCGACGCACTCCCCTGGCTGTGG...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS-3UTR GCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAGTGATCATGGCTCCCTaGAGCCTCGTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAVIMAP*SLVLLG
Trigger: GCCCAGGAGGACGAGGCTGCAGGGAGCCATGATCAC...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEATLGP*THGEGP
Trigger: GGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLELRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWARGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCTLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAACCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 72 bp CGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGATGGGCCTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RVLAGLEGFFRF*LATATGWALGA
Trigger: AGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPESGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCGGCGACGCAGGCGGTaGGCAAGGTGCCGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSRRRRR*ARCRRQ
Trigger: TTGCCTACGGCACCTTGCTCACCGCCTGCGTCGCCG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR GCA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: GRTGNTNQGTRTDLQHRWTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...CCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp CCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPGPQPPEYLGLQSLRHHGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...GTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLSSLPE*LPCRLE
Trigger: TTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR GCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGCGGCTCTCCTCGCTaGCCATCTAGCTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWCGSPR*PSSWRM
Trigger: CATGCGCCAGCTAGATGGGCAGCGAGGAGAGCCGCA...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQEPEVR*LPLGLR
Trigger: GCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347968.7
CDS-3UTR GCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAGGGGTCCCGCTATGTTaGTCAGGCTGGAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAGVPLC*SGWNSC
Trigger: GCAGGAGTTCCAGCCTGAGCAACATAGCGGGACCCC...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVATLGP*THGEGP
Trigger: GGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTTGGGGGCTGTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: KASFASCWQPPRDGPWGLSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...CAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: VLLGLSLQSIWDYKACATEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QNRKHKSGNQDGPAAQVVRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...TACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAGGACTAGTGGGGCAGTaGCACGACCTGGTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAGLVGQ*HDLVEH
Trigger: ATGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCC...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCTGGGGGCAGATCAAATaGACTAGTGGGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCWGQIK*TSGAVA
Trigger: TGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCA...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 72 bp GCAGGGAATGAAGCTGGGGCTGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCCTCCTTCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: AGNEAGAVSVSA*VSSLGASFLTS
Trigger: TGAGGTCAGGAAGGAGGCCCCGAGGGATGAGACCAAGGCTGACACTGACACAGCCCCAGCTTCATTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDARGRLL*SGSCRL
Trigger: GAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDRGRLL*SGSCRL
Trigger: GAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCCGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: RIRIQAEQETQIREPGRTRGRLL*SGSCRL
Trigger: GAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCG...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: THIIEAGGGERLTWVPGHSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp CACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAATCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HGMGLGGWIAQDALFEVESGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...TTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GPAAQVVTTVAFPVKSKVISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...CACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAACGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKRFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTSSLPE*LPCRLE
Trigger: TTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTTGCGGCTCTCCTCGCTaGCCATCTAGCTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCCGSPR*PSSWRM
Trigger: CATGCGCCAGCTAGATGGGCAGCGAGGAGAGCCGCA...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTCGGAAGTCCGCTGCCTaGCTCTCGGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ETQIREPGRTCSTGGNHSRKSAA*LSGSAS
Trigger: AGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCG...ACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GACGTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACGGAAGTCCGCTGCCTaGCTCTCGGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: DVSESWLALKASFASCWQRKSAA*LSGSAS
Trigger: AGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCG...TTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR GCA 90 bp GAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: EQETQIREPGRTCSTGGNEPEVR*LPLGLR
Trigger: GCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTC...GTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TTGTTTGAAGTCGAAGAGGGTGAGATCACACGCAGGGCCCAGGTATCGAGTCAGGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LFEVEEGEITRRAQVSSQEPEVR*LPLGLR
Trigger: GCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTC...CTGACTCGATACCTGGGCCCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR GCA 90 bp TCGAAGCAGGAATTCAGCCTCCTAGAACACATTCAGGCTGAGGGCAGGAGCCAAGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SKQEFSLLEHIQAEGRSQEPEVR*LPLGLR
Trigger: GCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTC...TTGGCTCCTGCCCTCAGCCTGAATGTGTTCTAGGAGGCTGAATTCCTGCTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCSAAVR*SRNRKS
Trigger: GGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGA...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAGGTGGTAACCACAGTTaGATTTCCAGTCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQGGNHS*ISSQEQ
Trigger: TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACC...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQATLGP*THGEGP
Trigger: GGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGC...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: RHGMGLGGWIAQDALFEVPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...GACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACATGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QIREPGRTCSTGGNHSCILRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATACGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQIRQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLLGLSLQSIWDYKACATANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCACACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VLLGLSLQSIWDYKACATLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTACCCCTTCGAGGGACTaGCAGTTGCGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGTPSRD*QLRLSS
Trigger: CGAGGAGAGCCGCAACTGCCAGTCCCTCGAAGGGGT...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGACCAGGGTCAGGATGTaGATCAGAAGTCCAGTAACT +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKTRVRM*IRSPVT
Trigger: AGTTACTGGACTTCTGATCCACATCCTGACCCTGGT...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGAGTGGCACGACCTGGTaGAGCATAATTAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKSGTTW*SIIKSL
Trigger: CAGACTCTTAATTATGCTCCACCAGGTCGTGCCACT...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACATGGAACTCCTGCTCCTaGGTTCAAGCGATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITWNSCS*VQAILP
Trigger: GGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCA...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSPLPLPPASQSVGITGCSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: PPGPQPPEYLGLQSLRHHHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...GTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCCAGTAACTGGTTTCTaGGAATCAGGATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSPVTGF*ESGSRQ
Trigger: CTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGG...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCCCCCTTATCGGCCTaGGGGCCCTTCATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLSPLSA*GPFIPP
Trigger: GGGAGGAATGAAGGGCCCTCAGGCCGATAAGGGGGA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPERWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: LALKASFASCWQPPRDGPASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...AGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATACCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQIPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVSQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWASQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGGGCAGTAGTCAGGCCTaGAGCCAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKGSSQA*SQACSC
Trigger: GCAGCTGCAGGCCTGGCTGCAGGCCTGACTACTGCC...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCGAGGGACTGGCAGTTaGGGCTCTCCTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCRGTGS*GSPRCP
Trigger: TGGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCG...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACACTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: FASCWQPPRDGPWGLDSTLWLST*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAG...TGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGACTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: VLAGLEGFFRFLLATATGLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATATGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQICQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000585595.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRARGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLERQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPERQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: REPGRTCSTGGNHSCISSSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...ACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCACTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGALLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGCTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQLGLRL*LSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347968.7
CDS-3UTR CCA 90 bp CACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAACTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: HGMGLGGWIAQDALFEVELGLRL*LSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG...TTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR TCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPELWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KHKSGNQDGPAAQVVTTVSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...AACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQILCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAACCAGTAACTGGTTTCTaGGAATCAGGATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PASQSVGITGCATARGRKPVTGF*ESGSRQ
Trigger: CTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGG...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: THIIEAGGGERLTWVPGHRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRAHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDATGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGSQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCSQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR GCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGGCAGTAGTCAGGCCTaGAGCCAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDGSSQA*SQACSC
Trigger: GCAGCTGCAGGCCTGGCTGCAGGCCTGACTACTGCC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACTGCGGCTCTCCTCGCTaGCCATCTAGCTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: EQETQIREPGRTCSTGGNCGSPR*PSSWRM
Trigger: CATGCGCCAGCTAGATGGGCAGCGAGGAGAGCCGCA...GTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACGAGGGACTGGCAGTTaGGGCTCTCCTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDARGTGS*GSPRCP
Trigger: TGGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGCACCTGCGCACTATTaGCTCGATGTCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAAPAHY*LDVACP
Trigger: AGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGCACCTGCGCACTATTaGCTCGATGTCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLAPAHY*LDVACP
Trigger: AGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCGGAAGTCCGCTGCCTaGCTCTCGGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPRKSAA*LSGSAS
Trigger: AGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGSAAVR*SRNRKS
Trigger: GGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGA...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGSAAVR*SRNRKS
Trigger: GGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGA...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TTGTTTGAAGTCGAAGAGGGTGAGATCACACGCAGGGCCCAGGTATCGAGTCAGTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LFEVEEGEITRRAQVSSQSAAVR*SRNRKS
Trigger: GGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGA...CTGACTCGATACCTGGGCCCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR GCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCCTTCCCGAGTGCCTaGCCTGCAGACTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGPFPSA*PADLAT
Trigger: GGTTGCCAAGTCTGCAGGGCAGGCACTCGGGAAGGG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAAGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGMGLGGWIAQDALFEVEASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...TTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPESFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WQPPRDGPWGLDSTRCLVDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...AACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPELSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALARGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp ACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TCSTGGNHSCISSQEQGGDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...ACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATACACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQIHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLRQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWARQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLETLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCATCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPESLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAACCCCTTCGAGGGACTaGCAGTTGCGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARTPSRD*QLRLSS
Trigger: CGAGGAGAGCCGCAACTGCCAGTCCCTCGAAGGGGT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARLGLRL*LSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACTGGGGTTGGGTGGTTaGTTCCACGGGTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARLGLGG*FHGCAS
Trigger: GCTGGCACACCCGTGGAACCAACCACCCAACCCCAG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS-3UTR CCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGGCATGTTTACCAGTTaGGGGAGCCACAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVGMFTS*GSHSQG
Trigger: CCCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR CCA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCGGCAGTGGCACGACCTaGTGGAGCATAATTAAGAGT +
Preference number: 4 (lower is better)
Translates to: VLLGLSLQSIWDYKACATGSGTT*WSIIKS
Trigger: ACTCTTAATTATGCTCCACCAGGTCGTGCCACTGCC...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATAAGCCTCCAGAGTATCTaGGACTACAAAGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQISLQSI*DYKACA
Trigger: GGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCT...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 72 bp GGGGTCCAACCTGACGTTTCCGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCA +
Preference number: 4 (lower is better)
Translates to: GVQPDVSESWLA*KASFASCWQPP
Trigger: TGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTCAGGTTGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp GGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAATCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: GRTCSTGGNHSCISSQEQSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCATCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GACGTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAATCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: DVSESWLALKASFASCWQSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...TTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR TCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp CACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAACTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HGMGLGGWIAQDALFEVELWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...TTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACATTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCACGGCGACGCAGGCGGTaGGCAAGGTGCCGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALARRRRR*ARCRRQ
Trigger: TTGCCTACGGCACCTTGCTCACCGCCTGCGTCGCCG...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GACGTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAAAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: DVSESWLALKASFASCWQRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...TTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPENVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QIREPGRTCSTGGNHSCICYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: ETQIREPGRTCSTGGNHSSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...ACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLERFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCCCGAGTGCCTGCCCTaGAGACTTGAATCCTACAGT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEPECLP*RLESYS
Trigger: ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPESSLPE*LPCRLE
Trigger: TTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGGCAGTAGTCAGGCCTaGAGCCAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRAGSSQA*SQACSC
Trigger: GCAGCTGCAGGCCTGGCTGCAGGCCTGACTACTGCC...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCGGCAGTAGTCAGGCCTaGAGCCAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPGSSQA*SQACSC
Trigger: GCAGCTGCAGGCCTGGCTGCAGGCCTGACTACTGCC...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGCACCTGCGCACTATTaGCTCGATGTCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPAPAHY*LDVACP
Trigger: AGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGC...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSSAAVR*SRNRKS
Trigger: GGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGA...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACCCGAGTGCCTGCCCTaGAGACTTGGCAACCAGACT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARPECLP*RLGNQT
Trigger: AGTCTGGTTGCCAAGTCTGCAGGGCAGGCACTCGGG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCATCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPSSLPE*LPCRLG
Trigger: GCCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACCCGAGTGCCTGCCCTaGAGACTTCAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARPECLP*RLQAPA
Trigger: TGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCCCGAGTGCCTGCCCTaGAGACTTCAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWPECLP*RLQAPA
Trigger: TGCTGGAGCTTGAAGTCTGCAGGGCAGGCACTCGGG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSSHSLP*GGHVYQ
Trigger: CTGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR CCA 90 bp GGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPAAQVVTTVAFPVKSKVASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...CACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATAGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQIGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCATGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAATGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HGMGLGGWIAQDALFEVECQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...TTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RIRIQAEQETQIREPGRTPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: THIIEAGGGERLTWVPGHRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPAAQVVTTVAFPVKSKVAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...CACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCACTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALALRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACAGGGGGCCAGGGCTCTaGGGTGCGGCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNRGPGL*GAALWA
Trigger: AGCCCACAGAGCCGCACCCCAGAGCCCTGGCCCCCT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRADELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPECCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTCACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGRQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQTLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPELLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPELLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: ETDMGSRPSSWVPARARGKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTACCCCTTCGAGGGACTaGCAGTTGCGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KHKSGNQDGPAAQVVTTVTPSRD*QLRLSS
Trigger: CGAGGAGAGCCGCAACTGCCAGTCCCTCGAAGGGGT...AACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAACCCCTTCGAGGGACTaGCAGTTGCGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDATPSRD*QLRLSS
Trigger: CGAGGAGAGCCGCAACTGCCAGTCCCTCGAAGGGGT...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGCTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGLGLRL*LSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCCTGCCCTGCAGACTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCPALQT*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGTCTGCAGGGCAGG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGCCAAGACTGGCTCTTaGGCAGGACTCGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLAKTGS*AGLEAG
Trigger: TCCTGCTTCGAGTCCTGCCCAAGAGCCAGTCTTGGC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCCTTCCTATTTGCCATTaGCAGAAACCAGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LGLSLQSIWDYKACATTPLPICH*QKPGLR
Trigger: TCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAG...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAACTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGCTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR TCA 90 bp CAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: QNRKHKSGNQDGPAAQVVQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...TACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPELHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCTCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCSSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCGGCGACGCAGGCGGTaGGCAAGGTGCCGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMARRRRR*ARCRRQ
Trigger: TTGCCTACGGCACCTTGCTCACCGCCTGCGTCGCCG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR TCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGAAAGACTGCTCTGGCTaGAGAGGGGGAGTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVKDCSG*RGGVRV
Trigger: TACCCTGACTCCCCCTCTTCAGCCAGAGCAGTCTTT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWANVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000585595.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDACYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000585595.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDASHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWARFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAACCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GRTCSTGGNHSCISSQEQPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWAREHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLSSLPE*LPCRLE
Trigger: TTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAACTGCCGAGAGCCAGTTaGATCTGCGTGCTGACGTTC +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQLPRAS*ICVLTF
Trigger: GAACGTCAGCACGCAGATGCAACTGGCTCTCGGCAG...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDASSLPE*LPCRLG
Trigger: GCCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR GCA 90 bp CCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGGTGGTAACCACAGTTaGATTTCCAGTCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PPGPQPPEYLGLQSLRHHGGNHS*ISSQEQ
Trigger: TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACC...GTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp GTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGAGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLAGLEGFFRFLLATATGESAQL*FGSCLL
Trigger: GAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAAATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: HGMGLGGWIAQDALFEVEMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...TTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EQETQIREPGRTCSTGGNLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...GTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWAREGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCAGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWACCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSRQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp AGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: REPGRTCSTGGNHSCISSANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...ACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: QIREPGRTCSTGGNHSCIAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCTLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGTLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ESGSRQNRKHKSGNQDGPQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...AGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: QIREPGRTCSTGGNHSCIHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCACAGAAGGCAGGCCTaGGTCTACTGCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGHRRQA*VYCLQQ
Trigger: CTGTTGCAGGCAGTAGACCCAGGCCTGCCTTCTGTG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000587605.5
CDS-3UTR CCA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCACAGGATATCCTAGGATaGGGGCAGATCAAATGGACT +
Preference number: 4 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAQDILG*GQIKWT
Trigger: AGTCCATTTGATCTGCCCCCATCCTAGGATATCCTG...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCCGAGTGCCTGCCCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWPSACP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGGCAGGCACTCGG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587605.5
CDS-3UTR TCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRASTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDALWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EQETQIREPGRTCSTGGNLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...GTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: THIIEAGGGERLTWVPGHLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCACTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCACGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDSSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDASSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSGEGPS*TSRLAL
Trigger: GAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFGEGPS*TSRLAL
Trigger: GAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCC...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: QIREPGRTCSTGGNHSCINVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000585595.5
CDS-3UTR GCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESGSRQNRKHKSGNQDGPGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...AGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCRFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCRFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCGAGGGACTGGCAGTTaGGGCTCTCCTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMARGTGS*GSPRCP
Trigger: TGGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGCCAGTTGCATCTaGGTGCTGACGTTCAACGAC +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWARASCI*VLTFND
Trigger: GTCGTTGAACGTCAGCACGCAGATGCAACTGGCTCT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACTGCCGAGAGCCAGTTaGATCTGCGTGCTGACGTTC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDALPRAS*ICVLTF
Trigger: GAACGTCAGCACGCAGATGCAACTGGCTCTCGGCAG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCGGAAGTCCGCTGCCTaGCTCTCGGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFRKSAA*LSGSAS
Trigger: AGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFEPEVR*LPLGLR
Trigger: GCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTC...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCCACAGCCAGGGGAGTaGGTCGCTGACATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSPQPGE*VADISD
Trigger: ATCAGAGATGTCAGCGACGCACTCCCCTGGCTGTGG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR GCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGTATCCGCCTTCTCTTaGTTCACCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVVSAFS*FTCNRA
Trigger: AGCCCTGTTGCAGGTGAAGCAAGAGAAGGCGGATAC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS-3UTR GCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGTCAGAGTTCAGAGCTaGATTCCTTCCCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQVRVQS*IPSRPQ
Trigger: CTGAGGACGGGAAGGAATGCAGCTCTGAACTCTGAC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR GCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCCCTTCCCGAGTGCCTaGCCTTGGCAACCAGACTGC +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSPFPSA*PWQPDC
Trigger: GCAGTCTGGTTGCCAAGGGCAGGCACTCGGGAAGGG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587605.5
CDS-3UTR CCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTAGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLATLGP*THGEGP
Trigger: GGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGC...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPSACPADLNPTVCRSLQDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCATTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: TCSTGGNHSCISSQEQGGRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...ACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGCACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: GPAAQVVTTVAFPVKSKVHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...CACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGRQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDTLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRAKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: TCSTGGNHSCISSQEQGGVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...ACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ETQIREPGRTCSTGGNHSCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...ACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RIRIQAEQETQIREPGRTGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACCAGAATACTGGGGTTaGGTGGTTGGTTCCACGGGT +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPPEYWG*VVGSTG
Trigger: ACCCGTGGAACCAACCACCCAACCCCAGTATTCTGG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGGGCATGTTTACCAGTTaGGGGAGCCACAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGGMFTS*GSHSQG
Trigger: CCCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCC...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CCA 90 bp AAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACACTTCCTATTTGCCATTaGCAGAAACCAGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: KRSSPLPLPPASQSVGITLPICH*QKPGLR
Trigger: TCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAG...TGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSRGRLL*SGSCRL
Trigger: GAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWASLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDALCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: THIIEAGGGERLTWVPGHFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGTTGCATCTGCGTGCTaGCGTTCAACGACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGVASAC*RSTTAN
Trigger: GTTAGCTGTCGTTGAACGTCAGCACGCAGATGCAAC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTGTTGCATCTGCGTGCTaGCGTTCAACGACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: QIREPGRTCSTGGNHSCIVASAC*RSTTAN
Trigger: GTTAGCTGTCGTTGAACGTCAGCACGCAGATGCAAC...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGTATGAACAGATGCTCTaGCAAGGTGACCCCATCTAC +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEYEQML*QGDPIY
Trigger: GTAGATGGGGTCACCTTGTCAGAGCATCTGTTCATA...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTATATCCTGTAGGGTTTaGGGAATCCTATGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCISCRV*GILCST
Trigger: GGTGCTGCATAGGATTCCTCAAACCCTACAGGATAT...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp CCAGAATACTGGGGTTGGGTGGTTGGTTCCTGGGGGAAACAAAGCAGTATCAGTAGCCAAGCACAAAGGTaGTCACAGGGCAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PEYWGWVVGSWGKQSSISSQAQR*SQGRRC
Trigger: GCATCTCCTGCCCTGTGATCACCTTTGTGCTTGGCT...ACTGATACTGCTTTGTTTCCCCCAGGAACCAACCACCCAACCCCAGTATTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCAAGAACACATTCAGGCTaGGGGCAGGAGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSRTHSG*GQEPST
Trigger: TGTGCTTGGCTCCTGCCCTCAGCCTGAATGTGTTCT...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDANVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCAGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCCCGAGTGCCTGCCCTaGAGACTTGAATCCTACAGT +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDPECLP*RLESYS
Trigger: ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACGAGGGACTGGCAGTTaGGGCTCTCCTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATRGTGS*GSPRCP
Trigger: TGGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCCGAGGGACTGGCAGTTaGGGCTCTCCTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSNWFLRIRIQAEQETQIRGTGS*GSPRCP
Trigger: TGGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCG...GATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGAGAGCCAGTTGCATCTaGGTGCTGACGTTCAACGAC +
Preference number: 4 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGRASCI*VLTFND
Trigger: GTCGTTGAACGTCAGCACGCAGATGCAACTGGCTCT...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGCTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GPAAQVVTTVAFPVKSKVLWLST*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAG...CACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAGAACCAGGACGGACCTaGAGCACAGGTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKEPGRT*STGGNH
Trigger: GTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTCACAGGGCAGGAGATaGACGTTGTCAGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSSQGRR*TLSGKM
Trigger: CATCTTTCCTGACAACGTGCATCTCCTGCCCTGTGA...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAGCAGCAGTAGCCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPEAAVA*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGCTACTGCTGCTTC...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587605.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAATLGP*THGEGP
Trigger: GGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRALSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCAATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRASFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRACQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCATGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALAWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEELRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TCSTGGNHSCISSQEQGGCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...ACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSTGGNHSCISSQEQGGNKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...ATTACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDACFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RYRAWPQISYRVDRIASNATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ESGSRQNRKHKSGNQDGPLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...AGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDALLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAELGLRL*LSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCCTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFLGLRL*LSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTTTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCLYSGS*GGEDAP
Trigger: TGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAA...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCCAGAATACTGGGGTTaGGTGGTTGGTTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPPEYWG*VVGSWG
Trigger: CCCCCAGGAACCAACCACCCAACCCCAGTATTCTGG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QNRKHKSGNQDGPAAQVVSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...TACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTGTTTGAAGTCGAAGAGGGTGAGATCACACGCAGGGCCCAGGTATCGAGTCAGAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFEVEEGEITRRAQVSSQSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...CTGACTCGATACCTGGGCCCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR TCA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCACATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KHKSGNQDGPAAQVVTTVHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...AACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR TCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALAQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFISTGA*DQGGEG
Trigger: GCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAAT...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR TCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACCTGCCCTGCAGACTTaGATCCTACAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARPALQT*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR TCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCCTGCCCTGCAGACTTaGATCCTACAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCPALQT*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR TCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTTTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGTTGCATCTGCGTGCTaGCGTTCAACGACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDVASAC*RSTTAN
Trigger: GTTAGCTGTCGTTGAACGTCAGCACGCAGATGCAAC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGACGGCGACGCAGGCGGTaGGCAAGGTGCCGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGRRRRR*ARCRRQ
Trigger: TTGCCTACGGCACCTTGCTCACCGCCTGCGTCGCCG...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEEVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
52% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp TGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CSTGGNHSCISSQEQGGNEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...ATTACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCTGCAGCCAGGCCTaGAGCTGCTCCACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSACSQA*SCSTFP
Trigger: GGGGAAGGTGGAGCAGCTGCAGGCCTGGCTGCAGGC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCGCACCTGCGCACTATTaGCTCGATGTCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFAPAHY*LDVACP
Trigger: AGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGC...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAGCACCTGCGCACTATTaGCTCGATGTCGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEAPAHY*LDVACP
Trigger: AGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGC...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCGGAAGTCCGCTGCCTaGCTCTCGGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFRKSAA*LSGSAS
Trigger: AGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHSAAVR*SRNRKS
Trigger: GGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGA...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATGAACCAGGACGGACCTaGAGCACAGGTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: CSTGGNHSCISSQEQGGNEPGRT*STGGNH
Trigger: GTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC...ATTACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: RYRAWPQISYRVDRIASNSHSLP*GGHVYQ
Trigger: CTGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS-3UTR CCA 90 bp TGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: CSTGGNHSCISSQEQGGNLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...ATTACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp AAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: KSGNQDGPAAQVVTTVAFGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...AAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESGSRQNRKHKSGNQDGPDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...AGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDADVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RYRAWPQISYRVDRIASNLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAATGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTGATGAACTCGGCAGGTaGCGAGGGGGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGDELGR*RGGQGS
Trigger: AGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATC...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAAGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALASLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: WFGSRFFLLGLIHTQALAVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACATGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRALLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRAITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGTTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGGATTCATGGTAGGGTaGCTTTGTAATGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEGFMVG*LCNVSP
Trigger: AGGTGACACATTACAAAGCCACCCTACCATGAATCC...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGCCTGCCCTGCAGACTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKPALQT*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGTCTGCAGGGCAGG...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR CCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCGGCATGTTTACCAGTTaGGGGAGCCACAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAGMFTS*GSHSQG
Trigger: CCCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCC...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAGGCATGTTTACCAGTTaGGGGAGCCACAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEGMFTS*GSHSQG
Trigger: CCCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCC...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS-3UTR CCA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGTGGGTGGTTGGTTCCTaGGGGAAACAAAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWWVVGS*GKQSSI
Trigger: GATACTGCTTTGTTTCCCCCAGGAACCAACCACCCA...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTATCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPEEVCRDTARSHPEATYSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR TCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSISGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVASGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRAHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCCTGCCCTGCAGACTTaGATCCTACAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSPALQT*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR TCA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCCAGTAACTGGTTTCTaGGAATCAGGATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDPVTGF*ESGSRQ
Trigger: CTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGG...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCAAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR GCA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLENSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGAGAGCCAGTTGCATCTaGGTGCTGACGTTCAACGAC +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRARASCI*VLTFND
Trigger: GTCGTTGAACGTCAGCACGCAGATGCAACTGGCTCT...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCTGCCGAGAGCCAGTTaGATCTGCGTGCTGACGTTC +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNLPRAS*ICVLTF
Trigger: GAACGTCAGCACGCAGATGCAACTGGCTCTCGGCAG...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGCTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKLWLST*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAG...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRALWLST*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGGAAGTCCGCTGCCTaGCTCTCGGGCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGERKSAA*LSGSAS
Trigger: AGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCG...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGEEPEVR*LPLGLR
Trigger: GCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTC...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCCACAGCCAGGGGAGTaGGTCGCTGACATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAPQPGE*VADISD
Trigger: ATCAGAGATGTCAGCGACGCACTCCCCTGGCTGTGG...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR GCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALSHSLP*GGHVYQ
Trigger: CTGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CCA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLPVRWATRDILLDNRRAGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAACCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR CCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCACCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMASFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: CFVVALIILPFSNPAPPPEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMARRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAERRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCTCCGGGGCGCCGCCTaGCAGCCATCTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSLRGAA*QPSWSH
Trigger: GTGACTCCAAGATGGCTGCCAGGCGGCGCCCCGGAG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFRQRHF*RFWLLP
Trigger: GGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLTLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQATLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFASTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEESTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTAAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: CFVVALIILPFSNPAPPPHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDAPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGCATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTTCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAGGCCTCCCAAAGTGTTaGAATTACAGGGTGCGCTAC +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKGLPKC*NYRVRY
Trigger: GTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFASTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCCTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTATCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLSSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGAACCCAGTTTCTGTATaGACAGATGCTCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKNPVSV*TDALTR
Trigger: CCTTGTCAGAGCATCTGTTCATACAGAAACTGGGTT...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: QNRKHKSGNQDGPAAQVVEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...TACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: IHLPFPSACPADLNPTVCEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR GCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFHRPRT*GSAGGS
Trigger: CGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTG...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAATCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGEVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTGTAGGGCCAAGATGGTaGCGTCGGGCAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFVGPRW*RRAELG
Trigger: GCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTAC...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCACCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGETGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCT +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFTGPGT*TGLLAP
Trigger: AGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGT...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR GCA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CFVVALIILPFSNPAPPPKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HPSSLPECLPCRLESYSLNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR GCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCGGCAGTAGTCAGGCCTaGAGCCAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSGSSQA*SQACSC
Trigger: GCAGCTGCAGGCCTGGCTGCAGGCCTGACTACTGCC...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCCCTTCCCGAGTGCCTaGCCTGCAGACTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFPFPSA*PADLAT
Trigger: GGTTGCCAAGTCTGCAGGGCAGGCACTCGGGAAGGG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR GCA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTAGCTCCAGCATTAGATaGAAAGACAACAGCCTTACA +
Preference number: 4 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSSSSIR*KDNSLT
Trigger: TGTAAGGCTGTTGTCTTTGCATCTAATGCTGGAGCT...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR GCA 90 bp GAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGGTGGTAACCACAGTTaGATTTCCAGTCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: EPGRTCSTGGNHSCISSQGGNHS*ISSQEQ
Trigger: TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACC...TTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATCCACAGCCAGGGGAGTaGGTCGCTGACATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHPQPGE*VADISD
Trigger: ATCAGAGATGTCAGCGACGCACTCCCCTGGCTGTGG...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR GCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHSHSLP*GGHVYQ
Trigger: CTGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR GCA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTTTCTCTTGCTTCACCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LHPSSLPECLPCRLESYSFSCFT*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGTGAAGCAAGAGAA...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: IVILSYPQVSSETLGSGFMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEEPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACATCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACATTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCCCGATGCCACATCATaGGGCAGCTGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFPDATS*GSCRRQ
Trigger: CTGCCTCCTGCAGCTGCCCCATGATGTGGCATCGGG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQAANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTTCGACGACGGTAAGGTaGGGGCGATCCTGCCCCATC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFSTTVR*GRSCPI
Trigger: GATGGGGCAGGATCGCCCCCACCTTACCGTCGTCGA...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGGCCGTCGGGCAGAGCTaGGCCTCTTTCGACGACGGT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGEAVGQS*ASFDDG
Trigger: ACCGTCGTCGAAAGAGGCCCAGCTCTGCCCGACGGC...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSNWFLRIRIQAEQETQISLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...GATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGATGLL*KLQQGP
Trigger: CGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGC...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGCTCAGGCCAGAGCACTaGGCCTCCTGCAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVLRPEH*ASCNRA
Trigger: AGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCCTGAG...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAATTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCAGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAACCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCATCACCTCGTTGGTGTaGGCAGTAGTCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLITSLV*AVVRPA
Trigger: TGCAGGCCTGACTACTGCCCACACCAACGAGGTGAT...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACTTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSCSTFPRIILSASLIPGHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWASLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCACAGAAGTCCAGTAACTaGTTTCTGAGAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPQKSSN*FLRIRI
Trigger: GATCCTGATTCTCAGAAACCAGTTACTGGACTTCTG...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACATCCTATGCAGCACCTaGGGTCTGCAGGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNILCST*GLQETQ
Trigger: CTGGGTTTCCTGCAGACCCCAGGTGCTGCATAGGAT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAATGGACAGCAGCCAGTaGGGAGATATATCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTMDSSQ*GDISCR
Trigger: CCTACAGGATATATCTCCCCACTGGCTGCTGTCCAT...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTGGACTAGTGGGGCAGTaGCACGACCTGGTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPGLVGQ*HDLVEH
Trigger: ATGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCC...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTTCCACAGGTGGCCCCTaGCTTGCGAAAGACTTCGCG +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGSTGGP*LAKDFA
Trigger: CGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGA...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVLVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCTCGGGGCCTCCTTCCTaGCCTCACCACTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFSGPPS*PHHSGV
Trigger: GACCCCAGAGTGGTGAGGTCAGGAAGGAGGCCCCGA...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDALLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGTTGCATCTGCGTGCTaGCGTTCAACGACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNVASAC*RSTTAN
Trigger: GTTAGCTGTCGTTGAACGTCAGCACGCAGATGCAAC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR TCA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGTGGTTCTGCTCCTCTaGTTGTACCCTAACATAAAT +
Preference number: 4 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCVVLLL*LYPNIN
Trigger: ATTTATGTTAGGGTACAATCAGAGGAGCAGAACCAC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR TCA 90 bp AGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTAAGGTGGTAATACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: REPGRTCSTGGNHSCISSKVVIP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTATTACCACCTT...ACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCAGAATTGGGAGAGAGTaGGGTAGGGCTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFRIGRE*GRAEPR
Trigger: TCTTGGCTCAGCCCTACCTCACTCTCTCCCAATTCT...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGCAGAACAGCCCCGATaGCACATCATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSAEQPR*HIMGQL
Trigger: CAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTAGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGAAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCAAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCAGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACAGTCTGTGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCISSQEQGGNTLNPTVCGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...ACAGACTGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SCSTFPRIILSASLIPGPNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAGCCAGGCCTGCAGCTaGTCCACCTTCCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGESQACS*STFPRI
Trigger: GATCCTGGGGAAGGTGGAGCAGCTGCAGGCCTGGCT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCTGCGGCTCTCCTCGCTaGCCATCTAGCTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSCGSPR*PSSWRM
Trigger: CATGCGCCAGCTAGATGGGCAGCGAGGAGAGCCGCA...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGCCCGAGTGCCTGCCCTaGAGACTTGGCAACCAGACT +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVPECLP*RLGNQT
Trigger: AGTCTGGTTGCCAAGTCTGCAGGGCAGGCACTCGGG...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR GCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFSSLPE*LPCRLQ
Trigger: TTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVASPQP*RPQEAA
Trigger: TGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAATCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CCA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAAGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTGCCTGGCAGCCATCTTaGAGTCACAGCCTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGAWQPS*SHSLPC
Trigger: GCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGC...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTATGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFATLTRH*AAAASW
Trigger: CCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGT...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGACAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWASFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTCATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAACCCCTTCGAGGGACTaGCAGTTGCGGCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSATPSRD*QLRLSS
Trigger: CGAGGAGAGCCGCAACTGCCAGTCCCTCGAAGGGGT...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCCGTGATCTCTTCCTCTaGGGCCAATTTGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CFVVALIILPFSNPAPPPRDLFL*GQFGGR
Trigger: TCTGCCTCCAAATTGGCCCCAGAGGAAGAGATCACG...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398495.6
CDS-3UTR CCA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGTTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: RFFLLGLIHTQALATNLGLYSGS*GGEDAP
Trigger: TGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAA...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTGTATGAGACAGAACTaGGAAATGGCTAATCCATGT +
Preference number: 4 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWACMRQN*EMANPC
Trigger: ACATGGATTAGCCATTTCCCAGTTCTGTCTCATACA...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAATGGGGGCAGATCAAATaGACTAGTGGGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQWGQIK*TSGAVA
Trigger: TGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCA...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTGGTAATAGGTGTCTaGGCGTCCACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGELVIGV*ASTGGP
Trigger: GGGGCCACCTGTGGACGCTCAGACACCTATTACCAG...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKLCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR TCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFQSSWV*QPRHTP
Trigger: TGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAACTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGCGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVRSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACATTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCTGCAAATATCACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLLQISP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTGATATTTGCAG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGERWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFRWPLT*ERLRGA
Trigger: AGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCT...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGECYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVGASGC*PRIWAC
Trigger: ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACAGTCTGTCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: SCISSQEQGGNTLNPTVCRFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...ACAGACTGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCCACCACCTGCTTCCTaGTTCGTTGGAGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSPPPAS*FVGAWV
Trigger: TACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATTGCAGTTCACACGTTaGCATGTATCTGCTAGATCA +
Preference number: 4 (lower is better)
Translates to: STFPRIILSASLIPGPDALQFTR*HVSARS
Trigger: TGATCTAGCAGATACATGGCAACGTGTGAACTGCAA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTTGCAGTTCACACGTTaGCATGTATCTGCTAGATCA +
Preference number: 4 (lower is better)
Translates to: CSTFPRIILSASLIPGPDLQFTR*HVSARS
Trigger: TGATCTAGCAGATACATGGCAACGTGTGAACTGCAA...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAAGAGCCAGTTGCATCTaGGTGCTGACGTTCAACGAC +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQRASCI*VLTFND
Trigger: GTCGTTGAACGTCAGCACGCAGATGCAACTGGCTCT...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGACTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCACGGGATGGGCCTTaGGGGCTGGATAGCACAAGA +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGEPRDGP*GLDSTR
Trigger: TCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGG...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTTCTTTCGCTTCTTGCTaGCAACCGCCACGGGATGGG +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFSFASC*QPPRDG
Trigger: CCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGA...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSILSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGLSRCL*VPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAA...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGAGGGCGAAGGCAGATaGGGCAATGGCCACAATCCT +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSEGEGR*GNGHNP
Trigger: AGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCTGGACACATTTCCACTaGCGCCTGAGACCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSWTHFH*RLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCA...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCACACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAAGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGEKVGPR*CRRAEL
Trigger: CAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACAGTCTGTTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SCISSQEQGGNTLNPTVCWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...ACAGACTGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGAGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGVGAWV*SGWAVR
Trigger: ACGCACAGCCCAACCAGACCATACCCAGGCTCCAAC...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEECFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: CFVVALIILPFSNPAPPPFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAGVHSS*VSAFSC
Trigger: GCAAGAGAAGGCGGATACCCAGGACGAGTGGACACC...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAQDSCA*CPLVLG
Trigger: ACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTG...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCACAGAAGGCAGGCCTaGGTCTACTGCCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSHRRQA*VYCLAR
Trigger: CCTAGCAAGGCAGTAGACCCAGGCCTGCCTTCTGTG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAGGATTCATGGTAGGGTaGCTTTGTAATGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTGFMVG*LCNVSP
Trigger: AGGTGACACATTACAAAGCCACCCTACCATGAATCC...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGCACAGAAGGCAGGCCTaGGTCTACTGCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVHRRQA*VYCLQQ
Trigger: CTGTTGCAGGCAGTAGACCCAGGCCTGCCTTCTGTG...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000339998.10
CDS-3UTR CCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTGGGCTGAGCCAAGACTaGCTCTTGGGCAGGACTCGA +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFGLSQD*LLGRTR
Trigger: TCGAGTCCTGCCCAAGAGCCAGTCTTGGCTCAGCCC...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAGGCAGTGGCACGACCTaGTGGAGCATAATTAAGAGT +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEGSGTT*WSIIKS
Trigger: ACTCTTAATTATGCTCCACCAGGTCGTGCCACTGCC...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSALWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTCTCTGGGGTCCAACCTaGCGTTTCCGAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFLWGPT*RFRVLA
Trigger: AGCCAAGACTCGGAAACGTCAGGTTGGACCCCAGAG...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPLHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACGAAGCTGGAGGTGGTaGGAGACTGACATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSARSWRW*ETDMGS
Trigger: GGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCG...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTCCTCAGGTGAGCAGTaGGACCCTTGGGAGCGGATT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGESSGEQ*DPWERI
Trigger: AATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR GCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGNVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: RYRAWPQISYRVDRIASNEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR GCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGTGTTACCTGGCAGGCTaGACACTCCCCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRCYLAG*TLPTAH
Trigger: GTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACA...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCC +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFSHSLP*GGHVYP
Trigger: GGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACT...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGESGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFRFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSKTQGQ*QAGAAQ
Trigger: TTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTT...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGAGCACTGGGCCTCCTaGAACAGGGCTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGEHWAS*NRASVE
Trigger: TTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTC...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFVSAFS*FTWGKA
Trigger: GGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATAC...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGAAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAGGGTCAGGTGGCTCTTaGTTCACAGAAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAGSGGS*FTEGRP
Trigger: AGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCC...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTCTGCCGAGAGCCAGTTaGATCTGCGTGCTGACGTTC +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGLPRAS*ICVLTF
Trigger: GAACGTCAGCACGCAGATGCAACTGGCTCTCGGCAG...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGCTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLLWLST*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAG...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTGTATGAACAGATaGTCTGACAAGGTGACCCCA +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSFCMNR*SDKVTP
Trigger: TGGGGTCACCTTGTCAGAGCATCTGTTCATACAGAA...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTATGGGCCTTGGGGGCTaGATAGCACAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGMGLGG*IAQDAL
Trigger: CAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEEDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCATGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSACQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGCCPRI*ACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCA...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCGCAGCAGCCGCTTCATaGCAAACTGCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSAAAAS*QTAGIG
Trigger: GCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGC...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ITFSIAISLRKYVETLPGWVWSG*AVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCA...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSASLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSCFVGA*VWSGWA
Trigger: AGCCCAACCAGACCATACCCAGGCTCCAACGAAGCA...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: SSNWFLRIRIQAEQETQIFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...GATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CCA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCATTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSLHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCACAGAAGGCAGGCCTaGGTCTACTGCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSHRRQA*VYCLQQ
Trigger: CTGTTGCAGGCAGTAGACCCAGGCCTGCCTTCTGTG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000339998.10
CDS-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAAATACTGGGGTTGGGTaGTTGGTTCCACGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSNTGVG*LVPRVC
Trigger: GCACACCCGTGGAACCAACCACCCAACCCCAGTATT...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS-3UTR CCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGTTATACTCAGGCTCTTaGGGAGGAGAAGATGCACCA +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALLYSGS*GGEDAP
Trigger: TGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAA...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACCATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSALCTTF*AAAFGC
Trigger: GCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAG...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp AGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACAGTCTGTTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SCISSQEQGGNTLNPTVCFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...ACAGACTGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR TCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVALHSNR*TRQVAR
Trigger: CCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAG...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCTTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTGTTGCATCTGCGTGCTaGCGTTCAACGACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAVASAC*RSTTAN
Trigger: GTTAGCTGTCGTTGAACGTCAGCACGCAGATGCAAC...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR GCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTGCTTCTTTCGCTTCTTaGTGGCAACCGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFASFAS*WQPPRD
Trigger: ATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGC...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGENVLSR*LWVPSP
Trigger: AGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFSGASG*CPRIWA
Trigger: AGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGA...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTCGCTTCATGGCAAACTaGAGGCATTGGCGCCAACGA +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFRFMAN*RHWRQR
Trigger: TCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCG...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFKSGQL*LVSTRP
Trigger: AGGACGAGTGGACACCAGGCACAGCTGTCCTGACTT...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR GCA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: CFVVALIILPFSNPAPPPKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCGGCACCAGCTTCTTCTaGAGGACACCCACATCATCG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSGTSFF*RTPTSS
Trigger: CGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCC...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTGCAGTTCACACGTTaGCATGTATCTGCTAGATCA +
Preference number: 4 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSLQFTR*HVSARS
Trigger: TGATCTAGCAGATACATGGCAACGTGTGAACTGCAA...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCAAGGTCACCGAAAACTCCTGTTAGTGCATACAGGATTACAGGTTACAGTTTAAGAGCCAGTTGCATCTaGGTGCTGACGTTCAACGAC +
Preference number: 4 (lower is better)
Translates to: SRSPKTPVSAYRITGYSLRASCI*VLTFND
Trigger: GTCGTTGAACGTCAGCACGCAGATGCAACTGGCTCT...TAAACTGTAACCTGTAATCCTGTATGCACTAACAGGAGTTTTCGGTGACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGCTGCCGAGAGCCAGTTaGATCTGCGTGCTGACGTTC +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRLPRAS*ICVLTF
Trigger: GAACGTCAGCACGCAGATGCAACTGGCTCTCGGCAG...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSLWLST*ALLPRC
Trigger: ACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTTCTTCCCTTCCCGAGTaGCTGCCCTGCAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGSSLPE*LPCRLQ
Trigger: TTGAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGA...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRLSVHR*PLTCER
Trigger: TCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAG...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGTGTCAGTGTCAGCCTTaGTCTCATCCCTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRCQCQP*SHPSGP
Trigger: AGGCCCCGAGGGATGAGACCAAGGCTGACACTGACA...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRRRQRR*THFHWR
Trigger: GCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACG...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSHFWRF*LLPPNL
Trigger: CAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSANCRH*RQRHFW
Trigger: CCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFSLGMV*LGCACS
Trigger: GCTACACGCACAGCCCAACCAGACCATACCCAGGCT...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTCTCCTCTGGGTCAGGTaGCTCTTGCTTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFLLWVR*LLLHRR
Trigger: CCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAG...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTCTCCTTGTCCTCCTCTaGGTCAGGTGGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGLLVLL*VRWLLL
Trigger: AAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAG...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: VETLPGLIQKPLTITHEHKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: VRWATRDILLDNRRAEVKSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTTACACTTGGAAGGTTaGTGCTGGGGCACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGELHLEG*CWGTRR
Trigger: ACGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGAGGCCTCCCAAAGTGTTaGAATTACAGGGTGCGCTAC +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGGLPKC*NYRVRY
Trigger: GTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 72 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVI*SYPQVSSETLG
Trigger: CCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269468.9
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVASLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACATCCCCTGAGAAGCTaGTTCCACAGTTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAHPLRS*FHSSHS
Trigger: GCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATG...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACTTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR TCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCACGTTGTCAGGAAAGATaGGCCAGGCTGGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSARCQER*ARLAAL
Trigger: TAAAGCTGCCAGCCTGGCTCATCTTTCCTGACAACG...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCA +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFVSVHT*RTAPMP
Trigger: TGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGAC...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRAPAQD*LRLPVK
Trigger: TTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGC...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCAAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTAAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRNSLPVRWATRDILLDNNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTGGATCCTGTCTCCTGTaGGGCTCTGGTAATAGGTGT +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFGSCLL*GSGNRC
Trigger: ACACCTATTACCAGAGCCCCACAGGAGACAGGATCC...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCGGATTCATGGTAGGGTaGCTTTGTAATGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFGFMVG*LCNVSP
Trigger: AGGTGACACATTACAAAGCCACCCTACCATGAATCC...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAGGATTCATGGTAGGGTaGCTTTGTAATGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: LAGITMKSMVFSFAFSATGFMVG*LCNVSP
Trigger: AGGTGACACATTACAAAGCCACCCTACCATGAATCC...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTAGGATTCATGGTAGGGTaGCTTTGTAATGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLGFMVG*LCNVSP
Trigger: AGGTGACACATTACAAAGCCACCCTACCATGAATCC...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTAATACTGGGGTTGGGTaGTTGGTTCCTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFNTGVG*LVPGGN
Trigger: GTTTCCCCCAGGAACCAACCACCCAACCCCAGTATT...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATAAGGTGGTAATACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNKVVIP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTATTACCACCTT...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTAGTGGCACGACCTGGTaGAGCATAATTAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPSGTTW*SIIKSL
Trigger: CAGACTCTTAATTATGCTCCACCAGGTCGTGCCACT...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGCAGGATATCCTAGGATaGGGGCAGATCAAATGGACT +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEEQDILG*GQIKWT
Trigger: AGTCCATTTGATCTGCCCCCATCCTAGGATATCCTG...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGESLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR TCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAGTCTTGGCTGGCCTTaGAGGCTTCTTTCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSSLGWP*RLLSLL
Trigger: AAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACT...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR TCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCATTCTCTGTTCCCGGTTaGAGGCAATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAFSVPG*RQFSVL
Trigger: GAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAA...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCTTCCAATTCCTACTGTaGCCCAAACAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: GLHRISVLAGITMKSMVFFQFLL*PKQGSQ
Trigger: TTGTGAACCTTGTTTGGGGCACAGTAGGAATTGGAA...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp GAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATTCCAATTCCTACTGTaGCCCAAACAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: EVCRDTARSHPEATYNYSFQFLL*PKQGSQ
Trigger: TTGTGAACCTTGTTTGGGGCACAGTAGGAATTGGAA...TGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGGACGTTTCCGAGTCTTaGCTGGCCTTGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRDVSES*LALKAS
Trigger: AGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTCCTCTGGGGCCAATTTaGAGGCAGAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGPLGPI*RQNHPC
Trigger: ACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGG...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CCA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGAGCTTCTCTAATTCCTaGGCCAGATGCATATTTAAC +
Preference number: 4 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALSFSNS*ARCIFN
Trigger: GTTAAATATGCATCTGGCCCAGGAATTAGAGAAGCT...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCACATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGGATTCATGGTAGGGTaGCTTTGTAATGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFAGFMVG*LCNVSP
Trigger: AGGTGACACATTACAAAGCCACCCTACCATGAATCC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTAAGGTGGTAATACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPKVVIP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTATTACCACCTT...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
3UTR CAA 72 bp TTGAGTCTAGGCTCTACTAACACCAGCTGTTCGACATaGGACAAATTAATGAGTCTCAGTTTTCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: LSLGSTNTSCST*DKLMSLSFPIH
Trigger: GTGGATGGGAAAACTGAGACTCATTAATTTGTCCAATGTCGAACAGCTGGTGTTAGTAGAGCCTAGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTTGCTGGAATCACCATaGAATCCATGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSLLESP*NPWSSA
Trigger: AGCTGAAGACCATGGATTTCATGGTGATTCCAGCAA...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRESAQL*FGSCLL
Trigger: CAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTC...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATAAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSIKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAAGCTCCAGCATTAGATaGAAAGACAACAGCCTTACA +
Preference number: 4 (lower is better)
Translates to: RISVLAGITMKSMVFSFASSSIR*KDNSLT
Trigger: TGTAAGGCTGTTGTCTTTGCATCTAATGCTGGAGCT...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CCA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAA +
Preference number: 4 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFFSCFT*GKATTQ
Trigger: TTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAA...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAAGGTCTTTGGACCTTaGCAACCAGACTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGEKVFGP*QPDCCI
Trigger: GATACAGCAGTCTGGTTGCCAAGGTCCAAAGACCTT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGCAGAAGTCCAGTAACTaGTTTCTGAGAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: TTKPAPPRPANLKTNFEEQKSSN*FLRIRI
Trigger: GATCCTGATTCTCAGAAACCAGTTACTGGACTTCTG...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR TCA 90 bp TCAAGGTCACCGAAAACTCCTGTTAGTGCATACAGGATTACAGGTTACAGTTTAGTGGTTCTGCTCCTCTaGTTGTACCCTAACATAAAT +
Preference number: 4 (lower is better)
Translates to: SRSPKTPVSAYRITGYSLVVLLL*LYPNIN
Trigger: ATTTATGTTAGGGTACAATCAGAGGAGCAGAACCAC...TAAACTGTAACCTGTAATCCTGTATGCACTAACAGGAGTTTTCGGTGACCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGAAGGCAATTCTCTGTaGTCGACAGTCTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGEGNSL*STVFAQ
Trigger: TTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTC...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR GCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAAGCCTCCAGTCTACTaGTTTCTAGCTCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSKPPVY*FLAPGF
Trigger: AAAACCTGGAGCTAGAAAGCAGTAGACTGGAGGCTT...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFNSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTTCCAATTCCTACTGTaGCCCAAACAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVFQFLL*PKQGSQ
Trigger: TTGTGAACCTTGTTTGGGGCACAGTAGGAATTGGAA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR GCA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATTCCAATTCCTACTGTaGCCCAAACAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSIFQFLL*PKQGSQ
Trigger: TTGTGAACCTTGTTTGGGGCACAGTAGGAATTGGAA...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCCATTGTTTTTACACTTaGAAGGTTGGTGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSHCFYT*KVGAGA
Trigger: TGCCCCAGCACCAACCTTCCAAGTGTAAAAACAATG...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTTCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 4 (lower is better)
Translates to: HRISVLAGITMKSMVFSFSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCATCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 4 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CCA 90 bp TCAAGGTCACCGAAAACTCCTGTTAGTGCATACAGGATTACAGGTTACAGTTTATCTCTTCCAGTAAGATaGGCCACAAGAGACATTTTG +
Preference number: 4 (lower is better)
Translates to: SRSPKTPVSAYRITGYSLSLPVR*ATRDIL
Trigger: CAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA...TAAACTGTAACCTGTAATCCTGTATGCACTAACAGGAGTTTTCGGTGACCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CCA 90 bp GTTAATAAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGACAGAAGTCCAGTAACTaGTTTCTGAGAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: VNKIFLFAIGRNQGLDSGQKSSN*FLRIRI
Trigger: GATCCTGATTCTCAGAAACCAGTTACTGGACTTCTG...TCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTTATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CCA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCCCATCCACATAAATaGACAAAATCAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLSHPHK*TKSMSS
Trigger: GGAAGACATTGATTTTGTCCATTTATGTGGATGGGA...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR TCA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGCTGCAAATATCACCTTaGATCCTACAGTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVLQISP*ILQSVE
Trigger: TTCTACAGACTGTAGGATTCAAGGTGATATTTGCAG...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR GCA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGAATTCCTGGGCCAGATaGATATTTAACTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSALHFQPHSYIELSSGENSWAR*IFNSVR
Trigger: CCTCACAGAGTTAAATATGCATCTGGCCCAGGAATT...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR GCA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCATTCCAATTCCTACTGTaGCCCAAACAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAFQFLL*PKQGSQ
Trigger: TTGTGAACCTTGTTTGGGGCACAGTAGGAATTGGAA...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
3UTR CAA 72 bp ATCCAGAAGCCACTTACAATTACTCATGAACATGGCTaGTTTAGGTTGTTTTGTGGTGGCTTTAATTATATT +
Preference number: 4 (lower is better)
Translates to: IQKPLTITHEHG*FRLFCGGFNYI
Trigger: AATATAATTAAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS GCA 90 bp TCTTCCGCCACTCTAGGCCCGTGGACCCATGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTCCTCCCCTTCCTCCTCCTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: SSATLGPWTHGEGPS*TSRLALLPFLLLRG
Trigger: GCCGCGGAGGAGGAGGAAGGGGAGGAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGCGGAAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000586118.5
ENST00000589758.1
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS TCA 90 bp CGCCTCGCCCTCCTCCCCTTCCTCCTCCTCCGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTCCGCGGCTGTTCGTTGCTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: RLALLPFLLLRGRLL*SGSCRLRGCSLLPE
Trigger: TTCCGGGAGCAACGAACAGCCGCGGAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCGGAGGAGGAGGAAGGGGAGGAGGGCGAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 90 bp GCCGCCTCCTCTGAAGCGGTAGCTGTCGCCTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCCGCTGCCTGCCTCTCGGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: AASSEAVAVASAAVR*SRNRKSAACLSGSA
Trigger: GGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAGGCGACAGCTACCGCTTCAGAGGAGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 90 bp GGCCACAGTCCATCCGCCGTAGGCAGGCTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCGTGTAGGGCTGCGGCTCTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: GHSPSAVGRLHRPRT*GSAGGSCRAAALWA
Trigger: AGCCCACAGAGCCGCAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000588937.5
ENST00000591535.5
CDS CCA 90 bp AGCCAGTTTGGCACCAGGCCGGTATCTTCCGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCCTCCTGCACCTCCCGCCTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: SQFGTRPVSSATLGP*THGEGPSCTSRLAL
Trigger: GAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGCGGAAGATACCGGCCTGGTGCCAAACTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000457839.6
ENST00000585672.5
ENST00000586118.5
ENST00000589758.1
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 90 bp GGCCACAGTCCATCCGCCGTAGGCAGGCTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCGTGTAGGGCTGTAGCTCGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GHSPSAVGRLHRPRT*GSAGGSCRAVARPR
Trigger: ACGAGGACGAGCTACAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269468.10
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000590208.5
ENST00000591416.5
CDS GCA 90 bp TGTCGCCTCCGCGGCTGTTCGTTGCTCCCGGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGCCTCTGGCTAAGCACCTGCGCACTA +
Preference number: 5 (lower is better)
Translates to: CRLRGCSLLPEPEVR*LPLGLRLWLSTCAL
Trigger: TAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAGGCGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS GCA 90 bp GGCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCTTCCAGCCAGGGCCCAGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: GSGNRCLSVHRWPLT*ERLRGASSQGPGPG
Trigger: GCCCGGCCCTGGGCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS GCA 90 bp GGCCACAGTCCATCCGCCGTAGGCAGGCTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCGTGTAGGGTAGCTCGTCCTCGTCTA +
Preference number: 5 (lower is better)
Translates to: GHSPSAVGRLHRPRT*GSAGGSCRVARPRL
Trigger: TAGACGAGGACGAGCTACCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAAGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: PASQSVGITGCATARGRKAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPLLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGGGGGGTCCCGCTATGTaGCTCAGGCTGGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKGGPAM*LRLELL
Trigger: CAGGAGTTCCAGCCTGAGCAACATAGCGGGACCCCC...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS TCA 90 bp CAAGGTGCCGTAGGCAACGTCGCTGGACACATTTCCACTGGCGCCTaGGACCAGGGCGGGGAGGGCGAAGGCAGATGGGGCAATGGCCAC +
Preference number: 5 (lower is better)
Translates to: QGAVGNVAGHISTGA*DQGGEGEGRWGNGH
Trigger: GTGGCCATTGCCCCATCTGCCTTCGCCCTCCCCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACGGCACCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000592060.5
CDS TCA 90 bp GGAGGGCGAAGGCAGATGGGGCAATGGCCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCACACCCTCGGCTCTGTTGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: GGRRQMGQWPQSSWV*QPRHTPHPRLCWRG
Trigger: CCCCCGCCAACAGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591661.1
CDS GCA 90 bp ACCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCTTCCAGCCAGGGCCCAGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: TSGNRCLSVHRWPLT*ERLRGASSQGPGPG
Trigger: GCCCGGCCCTGGGCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589758.1
ENST00000589867.2
CDS GCA 90 bp TCCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCTTCCAGCCAGGGCCCAGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SSGNRCLSVHRWPLT*ERLRGASSQGPGPG
Trigger: GCCCGGCCCTGGGCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS CCA 90 bp CTCCCGGAACCGGAAGTCCGCTGCCTGCCTCTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTATTGCCTCGATGTCGCGTGCCCTTA +
Preference number: 5 (lower is better)
Translates to: LPEPEVRCLPLGLRL*LSTCALLPRCRVPL
Trigger: TAAGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTCCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS-3UTR CAA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGGGGGGTCCCGCTATGTaGCTCAGGCTGGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWGGPAM*LRLELL
Trigger: CAGGAGTTCCAGCCTGAGCAACATAGCGGGACCCCC...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS GCA 90 bp TGCGGCGGGCATGTTTACCAGTTGGGGGAGCCACAGCCAGGGGAGTaGGTCGCTGACATCTCTGATGACGGCGACGCAGGCGGTGAGCAA +
Preference number: 5 (lower is better)
Translates to: CGGHVYQLGEPQPGE*VADISDDGDAGGEQ
Trigger: TTGCTCACCGCCTGCGTCGCCGTCATCAGAGATGTCAGCGACGCACTCCCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCCCGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000592060.5
CDS CCA 90 bp GGCGCCAACGACACTTCTGGCGCTTCTGGTTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGTCGCAGCGGCCACAGTCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: GANDTSGASGCCPRI*ACRSRSRSGHSPSA
Trigger: GGCGGATGGACTGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS-3UTR CAA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAACAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: PASQSVGITGCATARGRKQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LGLSLQSIWDYKACATTPRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...GGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp TGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: CSWVQAILPTAPPAGLPKLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...CTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS TCA 90 bp TGGGCAGCAGCCGCTTTAGCTCGTCCTCGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGGGGGCCAGGGCTCTGGGGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: WAAAALARPRLHSNR*TRQVARGPGLWGAA
Trigger: AGCCGCACCCCAGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACGAGGACGAGCTAAAGCGGCTGCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347968.7
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000587605.5
ENST00000589541.5
ENST00000592060.5
CDS TCA 90 bp GGCGGTTCGTGTAGGGTAGCTCGTCCTCGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGGGGGCCAGGGCTCTGGGGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GGSCRVARPRLHSNR*TRQVARGPGLWGAA
Trigger: AGCCGCACCCCAGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACGAGGACGAGCTACCCTACACGAACCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS GCA 90 bp GGGCTTCTGTGGAAGCTGCAACAGGGCCCGGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAAACACAAGGTCAGTGCCAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GLLWKLQQGPAPAQD*LRLPVKTQGQCQAG
Trigger: CCCCGCCTGGCACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS-3UTR CAA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: SSPLPLPPASQSVGITGCGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: PAPGFKRSSPLPLPPASQESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...TTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS TCA 90 bp GGTTCGTGTAGGGCTGTAGCTCGTCCTCGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGGGGGCCAGGGCTCTGGGGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GSCRAVARPRLHSNR*TRQVARGPGLWGAA
Trigger: AGCCGCACCCCAGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACGAGGACGAGCTACAGCCCTACACGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000269468.10
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000590208.5
ENST00000591416.5
CDS GCA 90 bp CTCGGCTCCTTTCCACAATCCGGAGGCAGCGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCACATCATGGGGCAGCTGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LGSFPQSGGSVSVHT*RTAPMPHHGAAAGG
Trigger: GCCTCCTGCAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAGGAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS GCA 90 bp ACTGCAGGCATTGGCGCCAACGACACTTCTGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGTCGCAGCAGAAGTCGCAGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: TAGIGANDTSGASGC*PRIWACRSRSRSGH
Trigger: GTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 90 bp TGTCTCCTGTGGGGCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: CLLWGSGNRCLSVHR*PLTCERLRGASSQG
Trigger: GCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGCCCCACAGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 90 bp GGGGGCAGCACAAAGCCACCACCTGCTTCCTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCTGTGCGTGTAGCCAAGGTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: GGSTKPPPASCFVGA*VWSGWAVRVAKVGF
Trigger: GAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 90 bp CCTGGTGTCCACTCGTCCTGGGTATCCGCCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAACTCAGGCCAGAGCACTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PGVHSSWVSAFSCFT*GKATTQLRPEHWAS
Trigger: GGAGGCCCAGTGCTCTGGCCTGAGTTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS CCA 90 bp TGTGGGGCCAGTACCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: CGASTSGNRCLSVHR*PLTCERLRGASSQG
Trigger: GCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGTACTGGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589867.2
CDS-3UTR CAA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: VLLGLSLQSIWDYKACATMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCCTCCGCGGCTGTTCGTaGCTCCCGGAACCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: RHGMGLGGWIAQDALFEVLRGCS*LPEPEV
Trigger: GACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAG...GACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp CTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCCAAGGTGGTAATACCTaGGCAACCAGACTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: LLLLGSSDPPHCPSRRPPQGGNT*ATRLLY
Trigger: ATACAGCAGTCTGGTTGCCAAGGTATTACCACCTTG...GGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS TCA 90 bp GGAGGGCGAAGGCAGATGGGGCAATGGCCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCACACCCTCGGCTCCTTTCCACAATC +
Preference number: 5 (lower is better)
Translates to: GGRRQMGQWPQSSWV*QPRHTPHPRLLSTI
Trigger: GATTGTGGAAAGGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS GCA 90 bp CAAACTGCAGGCATTGGCGCCAACGACACTTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCTTGTCGCAGCAGAAGTCGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QTAGIGANDTSGASG*CPRIWACRSRSRSG
Trigger: GCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS GCA 90 bp CCTGCACAGGACTGCTTGCGCCTTCCCGTAAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAAAGCCACCACCTGCTTCCTGCTTCG +
Preference number: 5 (lower is better)
Translates to: PAQDCLRLPVKTQGQ*QAGAAQSHHLLPAS
Trigger: CGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 90 bp TACCCACCCAGTACCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: YPPSTSGNRCLSVHR*PLTCERLRGASSQG
Trigger: GCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGTACTGGGTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589758.1
CDS CCA 90 bp TCGGATCCTGTCTCCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCCAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SDPVSSGNRCLSVHR*PLTCERLRGASSQG
Trigger: GCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGAGACAGGATCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp TGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: WQPPRDGPWGLDSTRCLVGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...AACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATAGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQIVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: CSCSTFPRIILSASLIPGAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTLLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCATGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGAAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: VLAGLEGFFRFLLATATGSTCAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCT...TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTCTCCGCGGCTGTTCGTaGCTCCCGGAACCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGLRGCS*LPEPEV
Trigger: GACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAG...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGACCAGAATACTGGGGTaGGGTGGTTGGTTCCACGGG +
Preference number: 5 (lower is better)
Translates to: ETDMGSRPSSWVPARARGTRILG*GGWFHG
Trigger: CCCGTGGAACCAACCACCCAACCCCAGTATTCTGGT...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS GCA 90 bp ACAGCTGTGCCTGGTGTCCACTCGTCCTGGGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCCACAACCCAACTCAGGCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: TAVPGVHSSWVSAFS*FTWGKATTQLRPEH
Trigger: GTGCTCTGGCCTGAGTTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS GCA 90 bp GCCTGCAACAGGGCTTCTGTGGAAGCTGCAACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCTTCCCGTAAAAACACAAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: ACNRASVEAATGPGT*TGLLAPSRKNTRSV
Trigger: CACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000398488.5
ENST00000587605.5
ENST00000588937.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 90 bp AACTCACCCTTTCCACAATCCGGAGGCAGCGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCACATCATGGGGCAGCTGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: NSPFPQSGGSVSVHT*RTAPMPHHGAAAGG
Trigger: GCCTCCTGCAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAGGGTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591661.1
CDS CCA 90 bp AGCCGCTTCATGGCAAACTGCAGGCATTGGCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCCCCGAATTTGGGCTTGTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SRFMANCRHWRQRHF*RFWLLPPNLGLSQQ
Trigger: CTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 90 bp CCACCACCTGCTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAGGTGGGCTTCAAGGTAGGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: PPPASCFVGAWVWSG*AVRVAKVGFKVGPR
Trigger: TCTTGGCCCTACCTTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 90 bp AAAGCCACCACCTGCTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGCCAAGGTGGGCTTCAAGGTAGGGCC +
Preference number: 5 (lower is better)
Translates to: KATTCFLLRWSLGMV*LGCACSQGGLQGRA
Trigger: GGCCCTACCTTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 90 bp AGGGCAGCCAGGCACCAATACGGGAGAAGTCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGTATCCGCCTTCTCTTGCTTCACCTG +
Preference number: 5 (lower is better)
Translates to: RAARHQYGRSQDSCA*CPLVLGIRLLLLHL
Trigger: CAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTCTCCCGTATTGGTGCCTGGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp AAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: KSGNQDGPAAQVVTTVAFAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...AAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GGATGGGGGCAGATCAAATGGACTAGTGGGGCAGTGGCACGACCTGGTGGAGCAGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: GWGQIKWTSGAVARPGGAGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...TGCTCCACCAGGTCGTGCCACTGCCCCACTAGTCCATTTGATCTGCCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp GAGACTGACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: ETDMGSRPSSWVPARARGPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGTCAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSPLPLPPASQSVGITGCEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...GCACCCTGTAATTCCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CTCAGGCTGGAACTCCTGCTCCTGGGTTCAAGCGATCCTCCCCACTGCCCCTCCTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LRLELLLLGSSDPPHCPSSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...GGAGGGGCAGTGGGGAGGATCGCTTGAACCCAGGAGCAGGAGTTCCAGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGTCGAGGGACTGGCAGTaGCGGCTCTCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPAAQVVTTVAFPVKSKVSRDWQ*RLSSLP
Trigger: GGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCGA...CACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS TCA 90 bp GGAGGGCGAAGGCAGATGGGGCAATGGCCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCACACCCTCGGCTCTTAAACATTCTC +
Preference number: 5 (lower is better)
Translates to: GGRRQMGQWPQSSWV*QPRHTPHPRLLNIL
Trigger: GAGAATGTTTAAGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353909.7
ENST00000585672.5
ENST00000592060.5
CDS GCA 90 bp ACCTGCAACAGGGCTTCTGTGGAAGCTGCAACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCTTCCCGTAAAAACACAAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TCNRASVEAATGPGT*TGLLAPSRKNTRSV
Trigger: CACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS GCA 90 bp ACAGCCCACACGCTGCCAGGAATGGTAGGGACGAGATCACGGGCCTaGTCCAGAAGCACTGGTCCTCCCATGTCTACTGACCCTACATCA +
Preference number: 5 (lower is better)
Translates to: TAHTLPGMVGTRSRA*SRSTGPPMSTDPTS
Trigger: TGATGTAGGGTCAGTAGACATGGGAGGACCAGTGCTTCTGGAGCAGGCCCGTGATCTCGTCCCTACCATTCCTGGCAGCGTGTGGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586679.1
CDS CCA 90 bp ATGGCAAACTGCAGGCATTGGCGCCAACGACACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTGGGCTTGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: MANCRHWRQRHFWRF*LLPPNLGLSQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 90 bp GGTGGTTGGTTCCACGGGTGTGCCAGCCCCTCCTGCCTCTTCCTCTaGGGCCAATTTGGAGGCAGAATCATCCTTGTTCTCCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: GGWFHGCASPSCLFL*GQFGGRIILVLLLV
Trigger: GACAAGGAGGAGAACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGAAGAGGCAGGAGGGGCTGGCACACCCGTGGAACCAACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: CSCSTFPRIILSASLIPGQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATGGGCCTTGGGGGCTGGATAGCACAAGATGCCTTGTTTGAAGTCGAAGAGGGTCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: MGLGGWIAQDALFEVEEGQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTATCCAGCCCCCAAGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp CTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTTGGGGGCTGGATAGCACGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LSLLAGNRHGMGLGGWIARVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...TGCTATCCAGCCCCCAAGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: PASQSVGITGCATARGRKSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLERLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GRTGNTNQGTRTDLQHRWMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...CCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: FPSACPADLNPTVCRSLQRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAATACTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: GLPKCWNYRVRYRAWPQILLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...TATTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: QIREPGRTCSTGGNHSCIPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...AATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATCGAGGGACTGGCAGTaGCGGCTCTCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: STFPRIILSASLIPGPDASRDWQ*RLSSLP
Trigger: GGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCGA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCTCCGCGGCTGTTCGTaGCTCCCGGAACCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWLRGCS*LPEPEV
Trigger: GACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS CCA 90 bp AGCACAAAGCCACCACCTGCTTCCTGCTTCGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGTGTAGCCAAGGTGGGCTTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: STKPPPASCFVGAWV*SGWAVRVAKVGFKV
Trigger: TACCTTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGCTTTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 90 bp AATACGGGAGAAGTCAGGACAGCTGTGCCTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGCTTCACCTGGGGTAAGGCCACAACC +
Preference number: 5 (lower is better)
Translates to: NTGEVRTAVPGVHSS*VSAFSCFTWGKATT
Trigger: GGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTCTCCCGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGCAGCAGTAGCCAGTTaGGCACCAGGCCGGTATCTT +
Preference number: 5 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEAAVAS*APGRYL
Trigger: AAGATACCGGCCTGGTGCCAAACTGGCTACTGCTGC...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCACAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: TCSTGGNHSCISSQEQGGQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...ACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTGCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: HGFQAILVGSSSCSWAPLHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...CAGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TGGGTTCAAGCGATCCTCCCCACTGCCCCTCCCGCCGGCCTCCCAAAGTGTTGGATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: WVQAILPTAPPAGLPKCWIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...CCAACACTTTGGGAGGCCGGCGGGAGGGGCAGTGGGGAGGATCGCTTGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAACCGCCACGGGATGGGCCTGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: LALKASFASCWQPPRDGPESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...AGGCCCATCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp TTGTTTGAAGTCGAAGAGGGTGAGATCACACGCAGGGCCCAGGTATCGAGTCAGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: LFEVEEGEITRRAQVSSQVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CTGACTCGATACCTGGGCCCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: ETQIREPGRTCSTGGNHSESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...ACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: CSCSTFPRIILSASLIPGRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: HPSSLPECLPCRLESYSLPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: LHPSSLPECLPCRLESYSPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGTCGAGGGACTGGCAGTaGCGGCTCTCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VRWATRDILLDNRRAEVKSRDWQ*RLSSLP
Trigger: GGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCGA...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAACTGGGGTTGGGTGGTaGGTTCCACGGGTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARTGVGW*VPRVCQ
Trigger: CTGGCACACCCGTGGAACCAACCACCCAACCCCAGT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS-3UTR CAA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCA +
Preference number: 5 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVESQPP*RRACLP
Trigger: TGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS CCA 90 bp AATCTCCGTGATCACGGGTGTGCCAGCCCCTCCTGCCTCTTCCTCTaGGGCCAATTTGGAGGCAGAATCATCCTTGTTCTCCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: NLRDHGCASPSCLFL*GQFGGRIILVLLLV
Trigger: GACAAGGAGGAGAACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGAAGAGGCAGGAGGGGCTGGCACACCCGTGATCACGGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586884.1
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 90 bp AATACGGGAGAAGTCAGGACAGCTGTGCCTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGCTTCACCTGCAACAGGGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: NTGEVRTAVPGVHSS*VSAFSCFTCNRASV
Trigger: CACAGAAGCCCTGTTGCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTCTCCCGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGCAGCAGTAGCCAGTTaGGCACCAGGCCGGTATCTT +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAAAVAS*APGRYL
Trigger: AAGATACCGGCCTGGTGCCAAACTGGCTACTGCTGC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACATGGGTTCCAGGCCATCCTCGTGGGTTCCAGCTCGTGCTCGTGGGCTCCACTCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: TWVPGHPRGFQLVLVGSTHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...AGTGGAGCCCACGAGCACGAGCTGGAACCCACGAGGATGGCCTGGAACCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GTCCTCCTGGGCCTCAGCCTCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: VLLGLSLQSIWDYKACATHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...GGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGAGGCTGAGGCCCAGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000585595.5
CDS-3UTR CAA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: RIRIQAEQETQIREPGRTRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: NSVRKGTSFFCRTPTSSKPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...CTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAATTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GRTCSTGGNHSCISSQEQFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...TTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: HPSSLPECLPCRLESYSLLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp GGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: GRTGNTNQGTRTDLQHRWPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPEPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: EQETQIREPGRTCSTGGNWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...GTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GRAPASSAGHPHHRSWRWSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...CCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: THIIEAGGGERLTWVPGHGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTCCTGCCGAGAGCCAGTaGCATCTGCGTGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: ETQIREPGRTCSTGGNHSPAESQ*HLRADV
Trigger: AACGTCAGCACGCAGATGCAACTGGCTCTCGGCAGG...ACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCCTGCCGAGAGCCAGTaGCATCTGCGTGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWPAESQ*HLRADV
Trigger: AACGTCAGCACGCAGATGCAACTGGCTCTCGGCAGG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCAAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSSTCAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCT...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: ESGSRQNRKHKSGNQDGPSTCAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCT...AGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGSTCAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCT...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCTCCGCGGCTGTTCGTaGCTCCCGGAACCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPLRGCS*LPEPEV
Trigger: GACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGGGCATGTTTACCAGTaGGGGGAGCCACAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LHPSSLPECLPCRLESYSGHVYQ*GEPQPG
Trigger: CCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCCC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGCCAAGACTGGCTCTaGGGCAGGACTCGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCSQDWL*GRTRSR
Trigger: CCTGCTTCGAGTCCTGCCCAAGAGCCAGTCTTGGCT...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp CCGGCCTCCCAAAGTGTTGGAATTACAGGGTGCGCTACCGCGCGTGGCCGCAAACAAGGTGGTAATACCTaGGCAACCAGACTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: PASQSVGITGCATARGRKQGGNT*ATRLLY
Trigger: ATACAGCAGTCTGGTTGCCAAGGTATTACCACCTTG...TTTGCGGCCACGCGCGGTAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS CCA 90 bp GTCCTCCTCTGGGTCAGGTGGCTCTTGCTTCACAGAAGGCAGGCCTaGGTCTACTGCCTGGGAGAAGTAGGAAACAGGCAACCATTAGAA +
Preference number: 5 (lower is better)
Translates to: VLLWVRWLLLHRRQA*VYCLGEVGNRQPLE
Trigger: TTCTAATGGTTGCCTGTTTCCTACTTCTCCCAGGCAGTAGACCCAGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586884.1
CDS-3UTR CAA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: RIRIQAEQETQIREPGRTGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: LPEEVCRDTARSHPEATYRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: SLPVRWATRDILLDNRRAESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: VRWATRDILLDNRRAEVKESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: ESGSRQNRKHKSGNQDGPPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...AGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGLLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCLLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: LPEEVCRDTARSHPEATYFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: SCSTFPRIILSASLIPGPLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: THIIEAGGGERLTWVPGHPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: HPSSLPECLPCRLESYSLPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LHPSSLPECLPCRLESYSWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp GAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EGHQLLLQDTHIIEAGGGEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...ACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GSTVSSVSHTLHPSSLPESSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...CTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGGTATCCGCCTTCTCTaGCTTCACCTGCAACAGGGC +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCGIRLL*LHLQQG
Trigger: GCCCTGTTGCAGGTGAAGCAAGAGAAGGCGGATACC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS-3UTR CAA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACCCGAGTGCCTGCCCTaGGCAACCAGACTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: STFPRIILSASLIPGPDAPECLP*ATRLLY
Trigger: ATACAGCAGTCTGGTTGCCAAGGGCAGGCACTCGGG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587605.5
CDS CCA 90 bp CTCTGTGCTCGACAGTCTTTGCACAACGTTTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAGCTGATTCCACAGTTCTCACAGCAC +
Preference number: 5 (lower is better)
Translates to: LCARQSLHNVLSRCL*VPSPEKLIPQFSQH
Trigger: GTGCTGTGAGAACTGTGGAATCAGCTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS-3UTR CAA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCGCAGCAGTAGCCAGTTaGGCACCAGGCCGGTATCTT +
Preference number: 5 (lower is better)
Translates to: RIRIQAEQETQIREPGRTAAVAS*APGRYL
Trigger: AAGATACCGGCCTGGTGCCAAACTGGCTACTGCTGC...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCCAGGTGGCCCCTGACTaGCGAAAGACTTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: IVILSYPQVSSETLGSGFQVAPD*RKTSRR
Trigger: GCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTG...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: THIIEAGGGERLTWVPGHESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: THIIEAGGGERLTWVPGHSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: HPSSLPECLPCRLESYSLSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GCTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTTGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: APLCPRSPTLYIHLPFPSCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...ACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: RISVLAGITMKSMVFSFAAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: SLPVRWATRDILLDNRRAPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: KSGNQDGPAAQVVTTVAFLLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...AAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCATTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: STFPRIILSASLIPGPDALLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: RIRIQAEQETQIREPGRTGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GAGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: ENQDPGRTGNTNQGTRTDLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...GTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: LPEEVCRDTARSHPEATYLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: LHPSSLPECLPCRLESYSLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCACTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: STFPRIILSASLIPGPDALLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGACCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: CFVVALIILPFSNPAPPPPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RFFLLGLIHTQALATNLGWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGNQDGPAAQVVTTVAFPEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...TGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HPSSLPECLPCRLESYSLEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...CAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTAGAAGCCTCCAGTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: FPSACPADLNPTVCRSLQSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...CTGGAGGCTTCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp ACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGACATGGGTTCCAGGCCATGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: THIIEAGGGERLTWVPGHACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...ATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR CAA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCGAAGCAGGAATTCAGCCTCCTAGAACACATTCAGGCTGAGGGCAGGAGCCAAACTGGGGTTGGGTGGTaGGTTCCTGGGGGAAACAAA +
Preference number: 5 (lower is better)
Translates to: SKQEFSLLEHIQAEGRSQTGVGW*VPGGNK
Trigger: TTTGTTTCCCCCAGGAACCAACCACCCAACCCCAGT...TTGGCTCCTGCCCTCAGCCTGAATGTGTTCTAGGAGGCTGAATTCCTGCTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCGTAGCCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSVACAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGCTAC...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587605.5
CDS GCA 90 bp TGTGACCAGCATAGTGGGTATGGGCCTTTACCTCCCACCACACCATaGCAAACTGCCGGCTATACTTTCAAAACTCAGGGCCCACATCTG +
Preference number: 5 (lower is better)
Translates to: CDQHSGYGPLPPTTP*QTAGYTFKTQGPHL
Trigger: CAGATGTGGGCCCTGAGTTTTGAAAGTATAGCCGGCAGTTTGGCATGGTGTGGTGGGAGGTAAAGGCCCATACCCACTATGCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586884.1
CDS-3UTR CAA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SCSTFPRIILSASLIPGPRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: CSCSTFPRIILSASLIPGRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: CSCSTFPRIILSASLIPGESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...CCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTATCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: QNRKHKSGNQDGPAAQVVSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...TACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCTGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: IVILSYPQVSSETLGSGFESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: CFVVALIILPFSNPAPPPRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCGCACAGGCCCCGCACTaGCGGTTCTGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSAQAPH*RFCRRF
Trigger: GAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGC...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: SLPVRWATRDILLDNRRALGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: VETLPGLIQKPLTITHEHPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCGGGCACCAGGCGTTGTaGCAGTTCACACGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPGHQAL*QFTRCH
Trigger: ATGGCAACGTGTGAACTGCAACAACGCCTGGTGCCC...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAAGTGAAGTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: VRWATRDILLDNRRAEVKFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...CTTCACTTCCGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PQVSSETLGSGFMVGWLCTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...ACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGGGCATGTTTACCAGTaGGGGGAGCCACAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALGHVYQ*GEPQPG
Trigger: CCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCCC...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CAA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAGGGCATGTTTACCAGTaGGGGGAGCCACAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEGHVYQ*GEPQPG
Trigger: CCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCCC...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS-3UTR CAA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCA +
Preference number: 5 (lower is better)
Translates to: RYRAWPQISYRVDRIASNESQPP*RRACLP
Trigger: TGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592060.5
CDS GCA 90 bp GCAATTCTCTGTGCTCGACAGTCTTTGCACAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCTGAGAAGCTGATTCCACAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: AILCARQSLHNVLSR*LWVPSPEKLIPQFS
Trigger: TGAGAACTGTGGAATCAGCTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACAGAGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 90 bp ATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGTAACCACAGTTaGATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGGCAACCAGA +
Preference number: 5 (lower is better)
Translates to: IREPGRTCSTGGNHS*ISSQEQGGNTLATR
Trigger: TCTGGTTGCCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LHPSSLPECLPCRLESYSRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAERLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LAGITMKSMVFSFAFSATRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: IVILSYPQVSSETLGSGFPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: RFFLLGLIHTQALATNLGPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: TLPGLIQKPLTITHEHGLWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...CAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: IVILSYPQVSSETLGSGFWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAACCCAGCTCCCCCACCCTTAAAATCCAACTTCTTATACTCAGGCTCTTGGGGGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QPSSPTLKIQLLILRLLGEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...CCCCAAGAGCCTGAGTATAAGAAGTTGGATTTTAAGGGTGGGGGAGCTGGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: STFPRIILSASLIPGPDAEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCAGGATCCAGGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: RIRIQAEQETQIREPGRTSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...GGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCCTGGATCCTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCATCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGCAGTTCACACGTTGCCATGTATCTGCTAGATCACCTCGTTGGTGTGGGCAGTGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: CSSHVAMYLLDHLVGVGSACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...ACTGCCCACACCAACGAGGTGATCTAGCAGATACATGGCAACGTGTGAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347968.7
ENST00000353909.7
CDS-3UTR CAA 90 bp TTACATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTGCCTGCCCTGCAGACTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LHPSSLPECLPCRLESYSACPAD*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGTCTGCAGGGCAGGC...ACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000589541.5
CDS-3UTR CAA 90 bp TCAAGGTCACCGAAAACTCCTGTTAGTGCATACAGGATTACAGGTTACAGTTTATCGAGGGACTGGCAGTaGCGGCTCTCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SRSPKTPVSAYRITGYSLSRDWQ*RLSSLP
Trigger: GGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCGA...TAAACTGTAACCTGTAATCCTGTATGCACTAACAGGAGTTTTCGGTGACCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: LAGITMKSMVFSFAFSATSTCAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCT...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACAGTCTGTCTCCGCGGCTGTTCGTaGCTCCCGGAACCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SCISSQEQGGNTLNPTVCLRGCS*LPEPEV
Trigger: GACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAG...ACAGACTGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTAGGGCATGTTTACCAGTaGGGGGAGCCACAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLGHVYQ*GEPQPG
Trigger: CCCTGGCTGTGGCTCCCCCAACTGGTAAACATGCCC...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CAA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGCAGCAGTAGCCAGTTaGGCACCAGGCCGGTATCTT +
Preference number: 5 (lower is better)
Translates to: SRNSLPVRWATRDILLDNAAVAS*APGRYL
Trigger: AAGATACCGGCCTGGTGCCAAACTGGCTACTGCTGC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RFFLLGLIHTQALATNLGRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACAAGCCCTGGCAACCAATCTAGGGTCCAGCCCCTAGTAGATCAGTGTTGTCTCCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: TSPGNQSRVQPLVDQCCLHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...GAGACAACACTGATCTACTAGGGGCTGGACCCTAGATTGGTTGCCAGGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATCCATCTTCCCTTCCCGAGTGCCTGCCCTGCAGACTTGAATCCTACAGTCTGTCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: IHLPFPSACPADLNPTVCHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...ACAGACTGTAGGATTCAAGTCTGCAGGGCAGGCACTCGGGAAGGGAAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTGTTTGAAGTCGAAGAGGGTGAGATCACACGCAGGGCCCAGGTATCGAGTCAGCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: LFEVEEGEITRRAQVSSQHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...CTGACTCGATACCTGGGCCCTGCGTGTGATCTCACCCTCTTCGACTTCAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp CAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGGTGGTGAGAGACTGATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: QLLLQDTHIIEAGGGERLIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...CAGTCTCTCACCACCTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACTGTGTCCTCGGTCTCCCACACTTTACATCCATCTTCCCTTCCCGAGTGATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: LHCVLGLPHFTSIFPSRVIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...CACTCGGGAAGGGAAGATGGATGTAAAGTGTGGGAGACCGAGGACACAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000585595.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RISVLAGITMKSMVFSFAVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCTGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: VETLPGLIQKPLTITHEHRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCAGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: RISVLAGITMKSMVFSFAESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAACGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTCGCCTGGCAGCCATCTaGGAGTCACAGCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGRLAAI*ESQPPL
Trigger: CAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCG...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACACCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: LAGITMKSMVFSFAFSATPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCTTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: LFWFGSRFFLLGLIHTQALLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...GGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: RYRAWPQISYRVDRIASNPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCCTGGGTCTACTGCCTaGCTAGGGCAGCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSPGSTA*LGQPGT
Trigger: GGTGCCTGGCTGCCCTAGCAAGGCAGTAGACCCAGG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp TCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACCGGAGGGCGGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLPVRWATRDILLDNRRAEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...CGCCCTCCGGTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACAGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ARCIFNSVRKGTSFFCRTEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...TGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCAGAGTATCTGGGACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRVSGTTKPAPPRPANLKEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...TTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGTCCCAGATACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ATAGTTATATTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: IVILSYPQVSSETLGSGFFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...GAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAATATAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: SRNSLPVRWATRDILLDNFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCACATCATCGAAGCTGGAGCATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 5 (lower is better)
Translates to: VRKGTSFFCRTPTSSKLEHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...CTCCAGCTTCGATGATGTGGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATACTCCGCGGCTGTTCGTaGCTCCCGGAACCGGAAGTC +
Preference number: 5 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSILRGCS*LPEPEV
Trigger: GACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAG...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGCAGAACAGGAAACACAAATCAGGGAACCAGGACGGACCTGCAGCACAGGTGGCAAGGTGGTAATACCTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: GRTGNTNQGTRTDLQHRWQGGNT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTATTACCACCTTG...CCACCTGTGCTGCAGGTCCGTCCTGGTTCCCTGATTTGTGTTTCCTGTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CGCTACCGCGCGTGGCCGCAAATATCTTACAGGGTTGATAGAATAGCAAGTAATCGGCCTCCCAAAGTGTaGGAATTACAGGGTGCGCTA +
Preference number: 5 (lower is better)
Translates to: RYRAWPQISYRVDRIASNRPPKV*ELQGAL
Trigger: TAGCGCACCCTGTAATTCCAACACTTTGGGAGGCCG...ATTACTTGCTATTCTATCAACCCTGTAAGATATTTGCGGCCACGCGCGGTAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp ACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTGGTCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: TCSTGGNHSCISSQEQGGHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...ACCACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp TGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: CSTFPRIILSASLIPGPDHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...ATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTGAGTTATCCTCAGGTGAGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: LSYPQVSSETLGSGFMVGIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...CCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCTCACCTGAGGATAACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CGGACCTGCAGCACAGGTGGTAACCACAGTTGCATTTCCAGTCAAGAGCAAGGTATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: RTCSTGGNHSCISSQEQGIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...ACCTTGCTCTTGACTGGAAATGCAACTGTGGTTACCACCTGTGCTGCAGGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp GACGTTTCCGAGTCTTGGCTGGCCTTGAAGGCTTCTTTCGCTTCTTGCTGGCAAATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: DVSESWLALKASFASCWQIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...TTGCCAGCAAGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTCGGAAACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS-3UTR CAA 90 bp CTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGAATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: LLHLPQDHPFSFSNSWARIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...TCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: WFGSRFFLLGLIHTQALACARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCACGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: RISVLAGITMKSMVFSFARLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACTACAAAGCCTGCGCCACCACGCCCTGCTAATTTAAAAACAAATTTTGAAGAGCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: TTKPAPPRPANLKTNFEEPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...CTCTTCAAAATTTGTTTTTAAATTAGCAGGGCGTGGTGGCGCAGGCTTTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS-3UTR CAA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: VETLPGLIQKPLTITHEHLLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: GLHRISVLAGITMKSMVFLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALPAQDC*RLPVKT
Trigger: TGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGG...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RISVLAGITMKSMVFSFAWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAATGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CAA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCATCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: WFGSRFFLLGLIHTQALASSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCTTTACACTTGGAAGGTaGGTGCTGGGGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: GLHRISVLAGITMKSMVFFTLGR*VLGHQA
Trigger: CGCCTGGTGCCCCAGCACCAACCTTCCAAGTGTAAA...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: STFPRIILSASLIPGPDATLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...TGCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCCATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 5 (lower is better)
Translates to: QLLHLPQDHPFSFSNSWAHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...GGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCTCGAGGGACTGGCAGTaGCGGCTCTCCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFSRDWQ*RLSSLP
Trigger: GGGCAGCGAGGAGAGCCGCAACTGCCAGTCCCTCGA...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACGGCAGGAGATGCACGTaGTCAGGAAAGATGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SRNSLPVRWATRDILLDNGRRCT*SGKMSQ
Trigger: CTGGCTCATCTTTCCTGACAACGTGCATCTCCTGCC...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp GTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATACCAGAATACTGGGGTaGGGTGGTTGGTTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: VETLPGLIQKPLTITHEHTRILG*GGWFLG
Trigger: CCCCAGGAACCAACCACCCAACCCCAGTATTCTGGT...ATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAERVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR CAA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMARVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: HRISVLAGITMKSMVFSFGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAAGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAEESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGGTGTCAGTGTCAGCCTaGGTCTCATCCCTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: SSALHFQPHSYIELSSGEVSVSA*VSSLGA
Trigger: GGCCCCGAGGGATGAGACCAAGGCTGACACTGACAC...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAECARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATACGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSIRLRSH*QNSPDA
Trigger: GGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACG...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCC +
Preference number: 5 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFESQPP*RRACLP
Trigger: GGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAPPNLG*SQQKSQ
Trigger: CTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGG...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: HRISVLAGITMKSMVFSFFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCACTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: RISVLAGITMKSMVFSFALGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...TGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTAACCAGCTCCCACAATGGCATGCGGTCAGATCCCTATAATAAATCCCTTAAACTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: LTSSHNGMRSDPYNKSLKLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...TTTAAGGGATTTATTATAGGGATCTGACCGCATGCCATTGTGGGAGCTGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339998.10
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AAAATCTTCCTATTTGCCATTGGCAGAAACCAGGGCTTAGACTCAGGATATCCTCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: KIFLFAIGRNQGLDSGYPLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...AGGATATCCTGAGTCTAAGCCCTGGTTTCTGCCAATGGCAAATAGGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp AGTTGCATTTCCAGTCAAGAGCAAGGTGGTAATACCTTGAATCCTACAGTCTGTCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTG +
Preference number: 5 (lower is better)
Translates to: SCISSQEQGGNTLNPTVCLLPAS*EPGYGL
Trigger: CAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAG...ACAGACTGTAGGATTCAAGGTATTACCACCTTGCTCTTGACTGGAAATGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382948.9
CDS-3UTR CAA 90 bp CAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QLLILRLLGRRRCTNFLLEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...GAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp GATGTGGATCAGAAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAATCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: DVDQKSSNWFLRIRIQAESSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...TTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTTCTGATCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWSHIVI*SYPQVS
Trigger: GCTCACCTGAGGATAACTCAATATAACTATGTGGCT...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SCSTFPRIILSASLIPGPSHIVI*SYPQVS
Trigger: GCTCACCTGAGGATAACTCAATATAACTATGTGGCT...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCAGATGCAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LHLPQDHPFSFSNSWARCSHIVI*SYPQVS
Trigger: GCTCACCTGAGGATAACTCAATATAACTATGTGGCT...GCATCTGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTGCAGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGCATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 5 (lower is better)
Translates to: LQLLHLPQDHPFSFSNSWHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...CCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTGCTCCACCTTCCCCAGGATCATCCTTTCAGCTTCTCTAATTCCTGGGCCACATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 5 (lower is better)
Translates to: SCSTFPRIILSASLIPGPHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...TGGCCCAGGAATTAGAGAAGCTGAAAGGATGATCCTGGGGAAGGTGGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCACCTGCCGAGAGCCAGTaGCATCTGCGTGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSPAESQ*HLRADV
Trigger: AACGTCAGCACGCAGATGCAACTGGCTCTCGGCAGG...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCCTGCCGAGAGCCAGTaGCATCTGCGTGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: HRISVLAGITMKSMVFSFPAESQ*HLRADV
Trigger: AACGTCAGCACGCAGATGCAACTGGCTCTCGGCAGG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSASTCAL*PRCRVP
Trigger: GGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCT...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCA +
Preference number: 5 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAESQPP*RRACLP
Trigger: TGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CAA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGTTTTTCCTCCTAGGGTaGATTCACACACAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RFFLLGLIHTQALATNLGFFLLG*IHTQAL
Trigger: CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAA...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp GGAGGCACACAGGATACAAAGTTTAAGGAGGCACTCACTCAGTCCTGGCCCTGTACCAGCTGTTCGACATaGGACAAATTAATGAGTCTC +
Preference number: 5 (lower is better)
Translates to: GGTQDTKFKEALTQSWPCTSCST*DKLMSL
Trigger: GAGACTCATTAATTTGTCCAATGTCGAACAGCTGGT...ACAGGGCCAGGACTGAGTGAGTGCCTCCTTAAACTTTGTATCCTGTGTGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGCAGCAGTAGCCAGTTaGGCACCAGGCCGGTATCTT +
Preference number: 5 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVAAVAS*APGRYL
Trigger: AAGATACCGGCCTGGTGCCAAACTGGCTACTGCTGC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAACGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382948.9
ENST00000585672.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCTTCTTCTGCAGGACACCCATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: RCIFNSVRKGTSFFCRTPIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...GGGTGTCCTGCAGAAGAAGCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAGGCTTCTTTCGCTTCTaGCTGGCAACCGCCACGGGA +
Preference number: 5 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSAGFFRF*LATATG
Trigger: TCCCGTGGCGGTTGCCAGCAAGAAGCGAAAGAAGCC...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TATTTTCCAGCTAAGGCAAAGCTCAGGGAGCCTAAGTGCCTTGTCAAACCAAATTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: YFPAKAKLREPKCLVKPNSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...ATTTGGTTTGACAAGGCACTTAGGCTCCCTGAGCTTTGCCTTAGCTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp ATCCAACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: IQLLILRLLGRRRCTNFLCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AAGTCCAGTAACTGGTTTCTGAGAATCAGGATCCAGGCAGAACAGGAAACACAATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: KSSNWFLRIRIQAEQETQCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TTGTGTTTCCTGTTCTGCCTGGATCCTGATTCTCAGAAACCAGTTACTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382948.9
ENST00000585672.5
ENST00000592060.5
CDS-3UTR CAA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSFWRFW*LPPNLG
Trigger: GCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAA...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCTGCCCTGCAGACTaGGCAACCAGACTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSACPAD*ATRLLY
Trigger: ATACAGCAGTCTGGTTGCCAAGTCTGCAGGGCAGGC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269471.9
ENST00000590208.5
CDS-3UTR CAA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCA +
Preference number: 5 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGESQPP*RRACLP
Trigger: TGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTC...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398495.6
ENST00000457839.6
CDS-3UTR CAA 90 bp AGACACTGCCAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTCACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: RHCQVSSRSHLQLLMNMAHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...AGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTCTAATTCCTGGGCCAGATGCATATTTAACTCTGTGAGGAAGGGCACCAGCATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: FSNSWARCIFNSVRKGTSIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...GCTGGTGCCCTTCCTCACAGAGTTAAATATGCATCTGGCCCAGGAATTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000587605.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRMATIL*GLTAPA
Trigger: TGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCAT...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SSALHFQPHSYIELSSGELLPPN*GLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCGGCAAACTGCAGGCATaGGCGCCAACGACACTTCTG +
Preference number: 5 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSGKLQA*APTTLL
Trigger: CAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCC...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGLGMVW*GCACSQ
Trigger: TTGGCTACACGCACAGCCCAACCAGACCATACCCAG...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGTGGGTCAGGTGGCTCTaGCTTCACAGAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRWVRWL*LHRRQA
Trigger: GGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GLIQKPLTITHEHGLFRLSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...CAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCCCTGCCGAGAGCCAGTaGCATCTGCGTGCTGACGTT +
Preference number: 5 (lower is better)
Translates to: TRFTKGLSSQQFSEFYIFPAESQ*HLRADV
Trigger: AACGTCAGCACGCAGATGCAACTGGCTCTCGGCAGG...GAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACTCTGCAAATATCACCTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LPEEVCRDTARSHPEATYSANIT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTGATATTTGCAGA...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCAGTGAGACCCTTGGGAGCGGATTCATGGTAGGGTGGCTTTGTAATGTGTCATCTGCAAATATCACCTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SSETLGSGFMVGWLCNVSSANIT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTGATATTTGCAGA...TGACACATTACAAAGCCACCCTACCATGAATCCGCTCCCAAGGGTCTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp CTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTCTCATCCAGAAGCCACTTACACTCATGAACATGGCTaGTTTAGGTTGTTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: LPEEVCRDTARSHPEATYTHEHG*FRLFCG
Trigger: ACCACAAAACAACCTAAACAAGCCATGTTCATGAGT...GTAAGTGGCTTCTGGATGAGACCTGGCAGTGTCTCTACATACTTCCTCAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: HRISVLAGITMKSMVFSFRVSST*LRILSP
Trigger: AGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCG...AAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCCCGGAACTCTCTTCCAGTAAGATGGGCCACAAGAGACATTTTGCTTGATAACATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SRNSLPVRWATRDILLDNIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...GTTATCAAGCAAAATGTCTCTTGTGGCCCATCTTACTGGAAGAGAGTTCCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGAGTCTTGGCTGGCCTaGAAGGCTTCTTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSESWLA*KASFAS
Trigger: AGAAGCGAAAGAAGCCTTCAAGGCCAGCCAAGACTC...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCATCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SVLAGITMKSMVFSFAFSSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...TGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SHLQLLMNMACLGCFVVASLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSICARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGCTGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LQLCIFSHIVILSYPQVSCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...GCTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGTCCTCTGGGGCCAATTaGGAGGCAGAATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GLQLCIFSHIVILSYPQVSSGAN*EAESSL
Trigger: CAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA...CACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CTTGCTGGAATCACCATGAAATCCATGGTCTTCAGCTTTGCATTTTCAGCCACAACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LAGITMKSMVFSFAFSATTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...TGTGGCTGAAAATGCAAAGCTGAAGACCATGGATTTCATGGTGATTCCAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGGCCTGCCCTGCAGACTaGGCAACCAGACTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRACPAD*ATRLLY
Trigger: ATACAGCAGTCTGGTTGCCAAGTCTGCAGGGCAGGC...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269471.9
CDS-3UTR CAA 90 bp AGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACCAATCTAGGGACTCATGAACATGGCTaGTTTAGGTTGTTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: RFFLLGLIHTQALATNLGTHEHG*FRLFCG
Trigger: ACCACAAAACAACCTAAACAAGCCATGTTCATGAGT...CCCTAGATTGGTTGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCTCAGTCTATCCAGTCTaGACTAGGGCTGAACTAGTT +
Preference number: 5 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFSVYPV*TRAELV
Trigger: AACTAGTTCAGCCCTAGTCAAGACTGGATAGACTGA...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp GGGCTTCATAGAATCTCTGTACTTGCTGGAATCACCATGAAATCCATGGTCTTCATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: GLHRISVLAGITMKSMVFIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...GAAGACCATGGATTTCATGGTGATTCCAGCAAGTACAGAGATTCTATGAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp TCTTCAGCTTTGCATTTTCAGCCACATAGTTATATTGAGTTATCCTCAGGTGAGTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SSALHFQPHSYIELSSGESLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...CTCACCTGAGGATAACTCAATATAACTATGTGGCTGAAAATGCAAAGCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000590208.5
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGSLHNV*SRCLWV
Trigger: CACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGA...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp GGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCATGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GSQKGCPPNNFLNSIYSACARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...TGCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGAGGCAGAATCATCCTaGTTCTCCTCCTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QKPLTITHEHGLFRLFCGEAESS*FSSLSS
Trigger: GGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTC...ACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTCCTAGTAGATCAGTGTaGTCTCTCATAAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLPSRSV*SLIKPV
Trigger: GACTGGCTTTATGAGAGACAACACTGATCTACTAGG...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGGCAACTCATGAACATGGCTaGTTTAGGTTGTTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: WFGSRFFLLGLIHTQALATHEHG*FRLFCG
Trigger: ACCACAAAACAACCTAAACAAGCCATGTTCATGAGT...TGCCAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CCCAAACAAGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATACACAAGATGCCTTGTTaGAAGTCGAAGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: PKQGSQKGCPPNNFLNSIHKMPC*KSKRVR
Trigger: TCTCACCCTCTTCGACTTCAAACAAGGCATCTTGTG...TATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCTTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGTGTGCTCGACAGTCTTaGCACAACGTTTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRCARQS*HNVLSR
Trigger: GCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACACATTGTTTTTACACTaGGAAGGTTGGTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYTLFLH*EGWCWG
Trigger: GCCCCAGCACCAACCTTCCAAGTGTAAAAACAATGT...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp ACTTCTTATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTCATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 5 (lower is better)
Translates to: TSYTQALGEEKMHQLSTLHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...AAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTATAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp CAGGTCTCATCCAGAAGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTCCTAGTAGATCAGTGTaGTCTCTCATAAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QVSSRSHLQLLMNMACLGPSRSV*SLIKPV
Trigger: GACTGGCTTTATGAGAGACAACACTGATCTACTAGG...ACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCTTCTGGATGAGACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTTTTCCTCCTAGGGTaGATTCACACACAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SHLQLLMNMACLGCFVVAFFLLG*IHTQAL
Trigger: CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAA...AGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TTCTGGTTTGGTAGTAGGTTTTTCCTCCTAGGGTTGATTCACACACAAGCCCTGCATGGCTTGTTTAGGTaGTTTTGTGGTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: FWFGSRFFLLGLIHTQALHGLFR*FCGGFN
Trigger: ATTAAAGCCACCACAAAACAACCTAAACAAGCCATG...CAGGGCTTGTGTGTGAATCAACCCTAGGAGGAAAAACCTACTACCAAACCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATACTCAGGCTCTTGGGGAGGAGAAGATGCACCAACTTTCTACTCTTTCTCTTCCATGGCTTGTTTAGGTaGTTTTGTGGTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: ILRLLGRRRCTNFLLFLFHGLFR*FCGGFN
Trigger: ATTAAAGCCACCACAAAACAACCTAAACAAGCCATG...GAAGAGAAAGAGTAGAAAGTTGGTGCATCTTCTCCTCCCCAAGAGCCTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp TGTTTTGTGGTGGCTTTAATTATATTACCTTTCTCCAACCCAGCTCCCCCACCCCATGGCTTGTTTAGGTaGTTTTGTGGTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: CFVVALIILPFSNPAPPPHGLFR*FCGGFN
Trigger: ATTAAAGCCACCACAAAACAACCTAAACAAGCCATG...GGGTGGGGGAGCTGGGTTGGAGAAAGGTAATATAATTAAAGCCACCACAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACCCTAGTAGATCAGTGTaGTCTCTCATAAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYPSRSV*SLIKPV
Trigger: GACTGGCTTTATGAGAGACAACACTGATCTACTAGG...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp CCACTTACAATTACTCATGAACATGGCTTGTTTAGGTTGTTTTGTGGTGGCTTTATAGCACAAGATGCCTaGTTTGAAGTCGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: PLTITHEHGLFRLFCGGFIAQDA*FEVEEG
Trigger: ACCCTCTTCGACTTCAAACAAGGCATCTTGTGCTAT...AAAGCCACCACAAAACAACCTAAACAAGCCATGTTCATGAGTAATTGTAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp ATTACATTTTCAATTGCTATCTCCCTGAGGAAGTATGTAGAGACACTGCCAGGTAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: ITFSIAISLRKYVETLPGSHIVI*SYPQVS
Trigger: GCTCACCTGAGGATAACTCAATATAACTATGTGGCT...ACCTGGCAGTGTCTCTACATACTTCCTCAGGGAGATAGCAATTGAAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591416.5
CDS-3UTR CAA 90 bp AGGTTCACAAAAGGGCTGTCCTCCCAACAATTTTCTGAATTCTATATATTCAGCAGCCACATAGTTATATaGAGTTATCCTCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: RFTKGLSSQQFSEFYIFSSHIVI*SYPQVS
Trigger: GCTCACCTGAGGATAACTCAATATAACTATGTGGCT...GCTGAATATATAGAATTCAGAAAATTGTTGGGAGGACAGCCCTTTTGTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS-3UTR CAA 90 bp AGATCAGTGTTGTCTCTCATAAAGCCAGTCTGCAAATATCACCTTGAATCCTACTCTGCAAATATCACCTaGAATCCTACAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: RSVLSLIKPVCKYHLESYSANIT*NPTVCR
Trigger: TCTACAGACTGTAGGATTCAAGGTGATATTTGCAGA...GTAGGATTCAAGGTGATATTTGCAGACTGGCTTTATGAGAGACAACACTGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000591416.5
CDS-3UTR CAA 90 bp AGCTTAGAGATAGAAACTAAATTATTTCCAATTCCTACTGTGCCCCAAACAAGGCATGGGCCGTATCTTTaGCATTTCTGTATCCTAGTA +
Preference number: 5 (lower is better)
Translates to: SLEIETKLFPIPTVPQTRHGPYL*HFCILV
Trigger: TACTAGGATACAGAAATGCAAAAGATACGGCCCATG...CCTTGTTTGGGGCACAGTAGGAATTGGAAATAATTTAGTTTCTATCTCTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000591416.5
CDS GCA 72 bp ACTCTAGGCCCGTGGACCCATGGCGAGGGTCCCTCCTaGACCTCCCGCCTCGCCCTCCTCCCCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TLGPWTHGEGPS*TSRLALLPFLL
Trigger: GAGGAGGAAGGGGAGGAGGGCGAGGCGGGAGGTGCAGGAGGGACCCTCGCCATGGGTCCACGGGCCTAGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000457839.6
ENST00000586118.5
ENST00000589758.1
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 72 bp CCATCCGCCGTAGGCAGGCTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCGTGTAGGGCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: PSAVGRLHRPRT*GSAGGSCRAAA
Trigger: AGCCGCAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269471.9
ENST00000588937.5
ENST00000591535.5
CDS CCA 72 bp GGCACCAGGCCGGTATCTTCCGCCACTCTAGGCCCGTaGACCCATGGCGAGGGTCCCTCCTGCACCTCCCGC +
Preference number: 6 (lower is better)
Translates to: GTRPVSSATLGP*THGEGPSCTSR
Trigger: GCGGGAGGTGCAGGAGGGACCCTCGCCATGGGTCCACGGGCCTAGAGTGGCGGAAGATACCGGCCTGGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000457839.6
ENST00000585672.5
ENST00000586118.5
ENST00000589758.1
ENST00000589867.2
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS TCA 72 bp CTCCTCCCCTTCCTCCTCCTCCGCGGCCGCCTCCTCTaGAGCGGTAGCTGTCGCCTCCGCGGCTGTTCGTTG +
Preference number: 6 (lower is better)
Translates to: LLPFLLLRGRLL*SGSCRLRGCSL
Trigger: CAACGAACAGCCGCGGAGGCGACAGCTACCGCTTCAGAGGAGGCGGCCGCGGAGGAGGAGGAAGGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000586118.5
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 72 bp CGCGGCTGTTCGTTGCTCCCGGAACCGGAAGTCCGCTaGCTGCCTCTCGGGCTCCGCCTCTGGCTAAGCACC +
Preference number: 6 (lower is better)
Translates to: RGCSLLPEPEVR*LPLGLRLWLST
Trigger: GGTGCTTAGCCAGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGGTTCCGGGAGCAACGAACAGCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 72 bp CCATCCGCCGTAGGCAGGCTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCGTGTAGGGCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: PSAVGRLHRPRT*GSAGGSCRAVA
Trigger: AGCTACAGCCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269468.10
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000590208.5
ENST00000591416.5
CDS GCA 72 bp CCATCCGCCGTAGGCAGGCTGCACAGGCCCCGCACTTaGGGTTCTGCCGGCGGTTCGTGTAGGGTAGCTCGT +
Preference number: 6 (lower is better)
Translates to: PSAVGRLHRPRT*GSAGGSCRVAR
Trigger: ACGAGCTACCCTACACGAACCGCCGGCAGAACCGCAAGTGCGGGGCCTGTGCAGCCTGCCTACGGCGGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS CCA 72 bp GGCCCAGGGCCGGGCAGTCCAGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCAGTAGCCTGCGCACTA +
Preference number: 6 (lower is better)
Translates to: GPGPGSPASPQP*RPQEAAVACAL
Trigger: TAGTGCGCAGGCTACTGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGCTGGACTGCCCGGCCCTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587605.5
CDS GCA 72 bp TCTGAAGCGGTAGCTGTCGCCTCCGCGGCTGTTCGTTaGTCCCGGAACCGGAAGTCCGCTGCCTGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: SEAVAVASAAVR*SRNRKSAACLS
Trigger: CGAGAGGCAGGCAGCGGACTTCCGGTTCCGGGAGCAACGAACAGCCGCGGAGGCGACAGCTACCGCTTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS CCA 72 bp GGCCCAGGGCCGGGCAGTCCAGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCAGTAGCCAGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: GPGPGSPASPQP*RPQEAAVASLA
Trigger: TGCCAAACTGGCTACTGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGCTGGACTGCCCGGCCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000457839.6
ENST00000585672.5
ENST00000586118.5
ENST00000589758.1
ENST00000589867.2
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS CCA 72 bp GGCCAGAGCACTGGGCCTCCTGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCGGCACCTGCACAGGAC +
Preference number: 6 (lower is better)
Translates to: GQSTGPPATGLL*KLQQGPAPAQD
Trigger: GTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGCAGGAGGCCCAGTGCTCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS CCA 72 bp CCGGAAGTCCGCTGCCTGCCTCTCGGGCTCCGCCTCTaGCTAAGCACCTGCGCACTATTGCCTCGATGTCGC +
Preference number: 6 (lower is better)
Translates to: PEVRCLPLGLRL*LSTCALLPRCR
Trigger: GCGACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAGAGGCAGGCAGCGGACTTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS CCA 72 bp GGCCCAGGGCCGGGCAGTCCAGCCAGTCCTCAGCCATaGAGGCCACAGGAAGCAGCAGTAGCCTGTCAGAGT +
Preference number: 6 (lower is better)
Translates to: GPGPGSPASPQP*RPQEAAVACQS
Trigger: ACTCTGACAGGCTACTGCTGCTTCCTGTGGCCTCCATGGCTGAGGACTGGCTGGACTGCCCGGCCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585595.5
CDS CAA 72 bp CGCCGCCTGGCAGCCATCTTGGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCCCGTAGGCAACGTCGC +
Preference number: 6 (lower is better)
Translates to: RRLAAILESQPP*RRACLPRRQRR
Trigger: GCGACGTTGCCTACGGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000585672.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000591661.1
CDS GCA 72 bp GCCGCCTGGCAGCCATCTTGGAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCCCGTAGGCAACGTCGCT +
Preference number: 6 (lower is better)
Translates to: AAWQPSWSHSLP*GGHVYPVGNVA
Trigger: AGCGACGTTGCCTACGGGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000585672.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000591661.1
CDS GCA 72 bp GCCGCCTGGCAGCCATCTTGGAGTCACAGCCTCCCTTaGGGCGGGCATGTTTACCAGTTGGGGGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: AAWQPSWSHSLP*GGHVYQLGEPQ
Trigger: CTGTGGCTCCCCCAACTGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000592060.5
CDS CCA 72 bp GCAGGCCTGGGTCTACTGCCTGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCGGCACCTGCACAGGAC +
Preference number: 6 (lower is better)
Translates to: AGLGLLPATGLL*KLQQGPAPAQD
Trigger: GTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGCAGGCAGTAGACCCAGGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269471.9
ENST00000339998.10
ENST00000398488.5
ENST00000587605.5
ENST00000588937.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp AGGCAGGTGGAGCAGGCCCCACAGTCTTCTGTTACCTaGCAGGCTGCACACTCCCCACAGCCCACACGCTGC +
Preference number: 6 (lower is better)
Translates to: RQVEQAPQSSVT*QAAHSPQPTRC
Trigger: GCAGCGTGTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACAGAAGACTGTGGGGCCTGCTCCACCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586679.1
CDS CAA 72 bp CGCCGCCTGGCAGCCATCTTGGAGTCACAGCCTCCCTaGCGGCGGGCATGTTTACCAGTTGGGGGAGCCACA +
Preference number: 6 (lower is better)
Translates to: RRLAAILESQPP*RRACLPVGGAT
Trigger: TGTGGCTCCCCCAACTGGTAAACATGCCCGCCGCAAGGGAGGCTGTGACTCCAAGATGGCTGCCAGGCGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000592060.5
CDS CAA 90 bp TGCCTGCCTCTCGGGCTCCGCCTCTGGCTAAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCCTTAATAGGGAGGCTCCCGCGCCTA +
Preference number: 6 (lower is better)
Translates to: CLPLGLRLWLSTCAL*PRCRVPLIGRLPRL
Trigger: TAGGCGCGGGAGCCTCCCTATTAAGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAGAGGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 72 bp GTCAGTGCCAGGCGGGGGCAGCACAAAGCCACCACCTaGTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTGG +
Preference number: 6 (lower is better)
Translates to: VSARRGQHKATT*FLLRWSLGMVW
Trigger: CCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCCCCGCCTGGCACTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp TTGCGGCGGGCATGTTTACCCCGTAGGCAACGTCGCTaGACACATTTCCACTGGCGCCTGAGACCAGGGCGG +
Preference number: 6 (lower is better)
Translates to: LRRACLPRRQRR*THFHWRLRPGR
Trigger: CCGCCCTGGTCTCAGGCGCCAGTGGAAATGTGTCCAGCGACGTTGCCTACGGGGTAAACATGCCCGCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000585672.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000591661.1
CDS CAA 90 bp TGGCGCCAACGACACTTCTGGCGCTTCTGGTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAGTCGCAGCGGCCACAGTCCATCCGC +
Preference number: 6 (lower is better)
Translates to: WRQRHFWRFWLLPPN*GLSQQKSQRPQSIR
Trigger: GCGGATGGACTGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 90 bp CCTCGGCTCCTTTCCACAATCCGGAGGCAGCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCCACATCATGGGGCAGCTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PRLLSTIRRQRLRSH*QNSPDATSWGSCRR
Trigger: CCTCCTGCAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAGGAGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 90 bp CAACGACACTTCTGGCGCTTCTGGTTGCTGCCCCCGAATTTGGGCTaGTCGCAGCAGAAGTCGCAGCGGCCACAGTCCATCCGCCGTAGG +
Preference number: 6 (lower is better)
Translates to: QRHFWRFWLLPPNLG*SQQKSQRPQSIRRR
Trigger: CCTACGGCGGATGGACTGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 90 bp CTTCTGTGGAAGCTGCAACAGGGCCCGGCACCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACACAAGGTCAGTGCCAGGCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: LLWKLQQGPAPAQDC*RLPVKTQGQCQAGA
Trigger: TGCCCCCGCCTGGCACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp AATAGGTGTCTGAGCGTCCACAGGTGGCCCCTGACTTaGGAAAGACTTCGCGGCGCTTCCAGCCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: NRCLSVHRWPLT*ERLRGASSQGP
Trigger: TGGGCCCTGGCTGGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589758.1
ENST00000589867.2
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
ENST00000591535.5
CDS GCA 72 bp CATGTTTACCAGTTGGGGGAGCCACAGCCAGGGGAGTaGGTCGCTGACATCTCTGATGACGGCGACGCAGGC +
Preference number: 6 (lower is better)
Translates to: HVYQLGEPQPGE*VADISDDGDAG
Trigger: GCCTGCGTCGCCGTCATCAGAGATGTCAGCGACGCACTCCCCTGGCTGTGGCTCCCCCAACTGGTAAACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000592060.5
CDS CCA 72 bp AGGCAGGTGGAGCAGGCCCCACAGTCTTCTGTTACCTaGCAGGCTGCACACTCCCCACAGCCCACACGCTTA +
Preference number: 6 (lower is better)
Translates to: RQVEQAPQSSVT*QAAHSPQPTRL
Trigger: TAAGCGTGTGGGCTGTGGGGAGTGTGCAGCCTGCCAGGTAACAGAAGACTGTGGGGCCTGCTCCACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp CGTGTAGCCAAGGTGGGCTTCAAGGTAGGGCCAAGATaGTGCCGTCGGGCAGAGCTGGGCCTCTTTCGACGA +
Preference number: 6 (lower is better)
Translates to: RVAKVGFKVGPR*CRRAELGLFRR
Trigger: TCGTCGAAAGAGGCCCAGCTCTGCCCGACGGCACCATCTTGGCCCTACCTTGAAGCCCACCTTGGCTACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp CCACCACCTGCTTCCTGCTTCGTTGGAGCCTGGGTATaGTCTGGTTGGGCTGTGCGTGTAGCCAAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: PPPASCFVGAWV*SGWAVRVAKVG
Trigger: GCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp CCGCCTTCTCTTGCTTCACCTGCAACAGGGCTTCTGTaGAAGCTGCAACAGGGCCCGGCACCTGCACAGGAC +
Preference number: 6 (lower is better)
Translates to: PPSLASPATGLL*KLQQGPAPAQD
Trigger: GTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCCTGTTGCAGGTGAAGCAAGAGAAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS CAA 72 bp AGGGCGAAGGCAGATGGGGCAATGGCCACAATCCTCTaGGGTCTGACAGCCCCGGCATACTCCACACCCTCG +
Preference number: 6 (lower is better)
Translates to: RAKADGAMATIL*GLTAPAYSTPS
Trigger: CGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCTTCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000591661.1
ENST00000592060.5
CDS CAA 72 bp CGACACTTCTGGCGCTTCTGGTTGCTGCCCCCGAATTaGGGCTTGTCGCAGCAGAAGTCGCAGCGGCCACAG +
Preference number: 6 (lower is better)
Translates to: RHFWRFWLLPPN*GLSQQKSQRPQ
Trigger: CTGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 72 bp GGGGCAGCACAAAGCCACCACCTGCTTCCTGCTTCGTaGGAGCCTGGGTATGGTCTGGTTGGGCTGTGCGTG +
Preference number: 6 (lower is better)
Translates to: GAAQSHHLLPAS*EPGYGLVGLCV
Trigger: CACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGCTTTGTGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CAA 72 bp CTCGGGCTCCGCCTCTGGCTAAGCACCTGCGCACTATaGCCTCGATGTCGCGTGCCCTTAATAGGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LGLRLWLSTCAL*PRCRVPLIGRL
Trigger: GAGCCTCCCTATTAAGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS CAA 90 bp GCAAACTGCAGGCATTGGCGCCAACGACACTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGCTTGTCGCAGCAGAAGTCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: ANCRHWRQRHFWRFW*LPPNLGLSQQKSQR
Trigger: CCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 90 bp GCCACCACCTGCTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAAGGTGGGCTTCAAGGTAGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: ATTCFLLRWSLGMVW*GCACSQGGLQGRAK
Trigger: CTTGGCCCTACCTTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS TCA 72 bp AGGCAGATGGGGCAATGGCCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCACACCCTCGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: RQMGQWPQSSWV*QPRHTPHPRLL
Trigger: AAGGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS TCA 72 bp AGGGCTGTAGCTCGTCCTCGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGGGGGCCAGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RAVARPRLHSNR*TRQVARGPGLW
Trigger: CCAGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACGAGGACGAGCTACAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269468.10
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000590208.5
ENST00000591416.5
CDS TCA 72 bp GCCGCTTTAGCTCGTCCTCGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGGGGGCCAGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: AALARPRLHSNR*TRQVARGPGLW
Trigger: CCAGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACGAGGACGAGCTAAAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347968.7
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000587605.5
ENST00000589541.5
ENST00000592060.5
CDS TCA 72 bp AGGCAGATGGGGCAATGGCCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCACACCCTCGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: RQMGQWPQSSWV*QPRHTPHPRLC
Trigger: ACAGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591661.1
CDS GCA 72 bp TGCCTGCCTCTCGGGCTCCGCCTCTGGCTAAGCACCTaGGCACTATTGCCTCGATGTCGCGTGCCCTTAATA +
Preference number: 6 (lower is better)
Translates to: CLPLGLRLWLST*ALLPRCRVPLI
Trigger: TATTAAGGGCACGCGACATCGAGGCAATAGTGCGCAGGTGCTTAGCCAGAGGCGGAGCCCGAGAGGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269471.9
ENST00000347968.7
ENST00000382948.9
ENST00000590208.5
ENST00000590215.1
ENST00000591416.5
CDS GCA 72 bp TTGGGTGGTTGGTTCCACGGGTGTGCCAGCCCCTCCTaGCTCTTCCTCTGGGGCCAATTTGGAGGCAGAATC +
Preference number: 6 (lower is better)
Translates to: LGGWFHGCASPS*LFLWGQFGGRI
Trigger: GATTCTGCCTCCAAATTGGCCCCAGAGGAAGAGGCAGGAGGGGCTGGCACACCCGTGGAACCAACCACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339998.10
CDS CCA 72 bp TGGGGCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCC +
Preference number: 6 (lower is better)
Translates to: WGSGNRCLSVHR*PLTCERLRGAS
Trigger: GGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp GACACTTCTGGCGCTTCTGGTTGCTGCCCCCGAATTTaGGCTTGTCGCAGCAGAAGTCGCAGCGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: DTSGASGCCPRI*ACRSRSRSGHS
Trigger: ACTGTGGCCGCTGCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp TGCAGGCATTGGCGCCAACGACACTTCTGGCGCTTCTaGTTGCTGCCCCCGAATTTGGGCTTGTCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: CRHWRQRHFWRF*LLPPNLGLSQQ
Trigger: CTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp CTGGGCAGCAGCCGCTTCATGGCAAACTGCAGGCATTaGCGCCAACGACACTTCTGGCGCTTCTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LGSSRFMANCRH*RQRHFWRFWLL
Trigger: CAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCCATGAAGCGGCTGCTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 90 bp CAACTCACCCTTTCCACAATCCGGAGGCAGCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCCACATCATGGGGCAGCTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: QLTLSTIRRQRLRSH*QNSPDATSWGSCRR
Trigger: CCTCCTGCAGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAGGGTGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591661.1
CDS TCA 72 bp AGGCAGATGGGGCAATGGCCACAATCCTCTTGGGTCTaGCAGCCCCGGCATACTCCACACCCTCGGCTCTTA +
Preference number: 6 (lower is better)
Translates to: RQMGQWPQSSWV*QPRHTPHPRLL
Trigger: TAAGAGCCGAGGGTGTGGAGTATGCCGGGGCTGTCAGACCCAAGAGGATTGTGGCCATTGCCCCATCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353909.7
ENST00000585672.5
ENST00000592060.5
CDS TCA 72 bp TGTAGGGTAGCTCGTCCTCGTCTACACAGTAATAGATaGACTCGGCAGGTGGCGAGGGGGCCAGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: CRVARPRLHSNR*TRQVARGPGLW
Trigger: CCAGAGCCCTGGCCCCCTCGCCACCTGCCGAGTTCATCTATTACTGTGTAGACGAGGACGAGCTACCCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585672.5
CDS GCA 72 bp ATTGGCGCCAACGACACTTCTGGCGCTTCTGGTTGCTaGCCCCGAATTTGGGCTTGTCGCAGCAGAAGTCGC +
Preference number: 6 (lower is better)
Translates to: IGANDTSGASGC*PRIWACRSRSR
Trigger: GCGACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS GCA 72 bp GGCATTGGCGCCAACGACACTTCTGGCGCTTCTGGTTaGTGCCCCCGAATTTGGGCTTGTCGCAGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: GIGANDTSGASG*CPRIWACRSRS
Trigger: ACTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS GCA 72 bp GACTGCTTGCGCCTTCCCGTAAAAACACAAGGTCAGTaGCAGGCGGGGGCAGCACAAAGCCACCACCTGCTT +
Preference number: 6 (lower is better)
Translates to: DCLRLPVKTQGQ*QAGAAQSHHLL
Trigger: AAGCAGGTGGTGGCTTTGTGCTGCCCCCGCCTGGCACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp TGGAAGCTGCAACAGGGCCCGGCACCTGCACAGGACTaGTTGCGCCTTCCCGTAAAAACACAAGGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: WKLQQGPAPAQD*LRLPVKTQGQC
Trigger: GCACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp AGGGCTTCTGTGGAAGCTGCAACAGGGCCCGGCACCTaGACAGGACTGCTTGCGCCTTCCCGTAAAAACACA +
Preference number: 6 (lower is better)
Translates to: RASVEAATGPGT*TGLLAPSRKNT
Trigger: TGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTTCCACAGAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp CCTGGTGTCCACTCGTCCTGGGTATCCGCCTTCTCTTaGTTCACCTGGGGTAAGGCCACAACCCAACTCAGG +
Preference number: 6 (lower is better)
Translates to: PGVHSSWVSAFS*FTWGKATTQLR
Trigger: CCTGAGTTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS GCA 72 bp AGCCAGGCACCAATACGGGAGAAGTCAGGACAGCTGTaGCTGGTGTCCACTCGTCCTGGGTATCCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: SQAPIREKSGQL*LVSTRPGYPPS
Trigger: AGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTCTCCCGTATTGGTGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
CDS GCA 72 bp ACGCTGCCAGGAATGGTAGGGACGAGATCACGGGCCTaGTCCAGAAGCACTGGTCCTCCCATGTCTACTGAC +
Preference number: 6 (lower is better)
Translates to: TLPGMVGTRSRA*SRSTGPPMSTD
Trigger: GTCAGTAGACATGGGAGGACCAGTGCTTCTGGAGCAGGCCCGTGATCTCGTCCCTACCATTCCTGGCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586679.1
CDS GCA 72 bp CACACGCAGGGCCCAGGTATCGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTGTGGGGCCAGTACCTC +
Preference number: 6 (lower is better)
Translates to: HTQGPGIESAQL*FGSCLLWGQYL
Trigger: GAGGTACTGGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGCCCTGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589867.2
CDS CCA 72 bp GCGATCCTGCCCCATCCTCAGACTCTGACCAGACACTaGGCAGCAGCCGCTTCATGGCAAACTGCAGGCATT +
Preference number: 6 (lower is better)
Translates to: AILPHPQTLTRH*AAAASWQTAGI
Trigger: AATGCCTGCAGTTTGCCATGAAGCGGCTGCTGCCCAGTGTCTGGTCAGAGTCTGAGGATGGGGCAGGATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp CACTCGTCCTGGGTATCCGCCTTCTCTTGCTTCACCTaGGGTAAGGCCACAACCCAACTCAGGCCAGAGCAC +
Preference number: 6 (lower is better)
Translates to: HSSWVSAFSCFT*GKATTQLRPEH
Trigger: GTGCTCTGGCCTGAGTTGGGTTGTGGCCTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS CCA 72 bp GTCTCCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCC +
Preference number: 6 (lower is better)
Translates to: VSSGNRCLSVHR*PLTCERLRGAS
Trigger: GGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS CAA 72 bp CTTTCCACAATCCGGAGGCAGCGTCTCCGTTCACACTaGCAGAACAGCCCCGATGCCACATCATGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LSTIRRQRLRSH*QNSPDATSWGS
Trigger: GCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000591661.1
CDS CAA 72 bp AGGCATTGGCGCCAACGACACTTCTGGCGCTTCTGGTaGCTGCCCCCGAATTTGGGCTTGTCGCAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: RHWRQRHFWRFW*LPPNLGLSQQK
Trigger: CTTCTGCTGCGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 72 bp AAGCTGCAACAGGGCCCGGCACCTGCACAGGACTGCTaGCGCCTTCCCGTAAAAACACAAGGTCAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: KLQQGPAPAQDC*RLPVKTQGQCQ
Trigger: CTGGCACTGACCTTGTGTTTTTACGGGAAGGCGCAAGCAGTCCTGTGCAGGTGCCGGGCCCTGTTGCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp TTTCCACAATCCGGAGGCAGCGTCTCCGTTCACACTTaGAGAACAGCCCCGATGCCACATCATGGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: FPQSGGSVSVHT*RTAPMPHHGAA
Trigger: AGCTGCCCCATGATGTGGCATCGGGGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000586679.1
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000591661.1
CDS CCA 72 bp ATGGCAAACTGCAGGCATTGGCGCCAACGACACTTCTaGCGCTTCTGGTTGCTGCCCCCGAATTTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: MANCRHWRQRHF*RFWLLPPNLGL
Trigger: CAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAATGCCTGCAGTTTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000353909.7
ENST00000382948.9
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp GCTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTGGTTaGGCTGTGCGTGTAGCCAAGGTGGGCTTCAAGGTA +
Preference number: 6 (lower is better)
Translates to: ASCFVGAWVWSG*AVRVAKVGFKV
Trigger: TACCTTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp ACCTGCTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTaGTTGGGCTGTGCGTGTAGCCAAGGTGGGCTTCAA +
Preference number: 6 (lower is better)
Translates to: TCFLLRWSLGMV*LGCACSQGGLQ
Trigger: TTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp ACAAAGCCACCACCTGCTTCCTGCTTCGTTGGAGCCTaGGTATGGTCTGGTTGGGCTGTGCGTGTAGCCAAG +
Preference number: 6 (lower is better)
Translates to: TKPPPASCFVGA*VWSGWAVRVAK
Trigger: CTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCAGGTGGTGGCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp GAAGTCAGGACAGCTGTGCCTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGCTTCACCTGGGGTAAG +
Preference number: 6 (lower is better)
Translates to: EVRTAVPGVHSS*VSAFSCFTWGK
Trigger: CTTACCCCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000590208.5
ENST00000591416.5
CDS CCA 72 bp AGGCACCAATACGGGAGAAGTCAGGACAGCTGTGCCTaGTGTCCACTCGTCCTGGGTATCCGCCTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: RHQYGRSQDSCA*CPLVLGIRLLL
Trigger: CAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTCTCCCGTATTGGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000269468.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
CDS CCA 72 bp GAAGTCAGGACAGCTGTGCCTGGTGTCCACTCGTCCTaGGTATCCGCCTTCTCTTGCTTCACCTGCAACAGG +
Preference number: 6 (lower is better)
Translates to: EVRTAVPGVHSS*VSAFSCFTCNR
Trigger: CCTGTTGCAGGTGAAGCAAGAGAAGGCGGATACCCAGGACGAGTGGACACCAGGCACAGCTGTCCTGACTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589541.5
CDS CCA 72 bp AGTACCTCTGGTAATAGGTGTCTGAGCGTCCACAGGTaGCCCCTGACTTGCGAAAGACTTCGCGGCGCTTCC +
Preference number: 6 (lower is better)
Translates to: STSGNRCLSVHR*PLTCERLRGAS
Trigger: GGAAGCGCCGCGAAGTCTTTCGCAAGTCAGGGGCCACCTGTGGACGCTCAGACACCTATTACCAGAGGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589758.1
ENST00000589867.2
CDS CAA 72 bp TGCTTCCTGCTTCGTTGGAGCCTGGGTATGGTCTGGTaGGGCTGTGCGTGTAGCCAAGGTGGGCTTCAAGGT +
Preference number: 6 (lower is better)
Translates to: CFLLRWSLGMVW*GCACSQGGLQG
Trigger: ACCTTGAAGCCCACCTTGGCTACACGCACAGCCCAACCAGACCATACCCAGGCTCCAACGAAGCAGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CAA 72 bp TCACACGCAGGGCCCAGGTATCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCTGTGGGGCCAGTACCT +
Preference number: 6 (lower is better)
Translates to: SHAGPRYRVSST*LRILSPVGPVP
Trigger: AGGTACTGGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGCCCTGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589867.2
CDS GCA 72 bp CACACGCAGGGCCCAGGTATCGAGTCAGCTCAACTTTaGTTCGGATCCTGTCTCCTGTGGGGCTCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: HTQGPGIESAQL*FGSCLLWGSGN
Trigger: ATTACCAGAGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGCCCTGCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CCA 72 bp TGGGTCAGGTGGCTCTTGCTTCACAGAAGGCAGGCCTaGGTCTACTGCCTGGGAGAAGTAGGAAACAGGCAA +
Preference number: 6 (lower is better)
Translates to: WVRWLLLHRRQA*VYCLGEVGNRQ
Trigger: TTGCCTGTTTCCTACTTCTCCCAGGCAGTAGACCCAGGCCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586884.1
CDS CAA 90 bp TCCTCTGGGGCCAATTTGGAGGCAGAATCATCCTTGTTCTCCTCCTaGTCCTCCTCTGGGTCAGGTGGCTCTTGCTTCACAGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SSGANLEAESSLFSS*SSSGSGGSCFTEGR
Trigger: CCTGCCTTCTGTGAAGCAAGAGCCACCTGACCCAGAGGAGGACAAGGAGGAGAACAAGGATGATTCTGCCTCCAAATTGGCCCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586884.1
ENST00000587605.5
ENST00000588937.5
ENST00000589541.5
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CAA 90 bp AGGGTGAGATCACACGCAGGGCCCAGGTATCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCTGTGGGGCCAGTACCTCTGGTAATA +
Preference number: 6 (lower is better)
Translates to: RVRSHAGPRYRVSST*LRILSPVGPVPLVI
Trigger: TATTACCAGAGGTACTGGCCCCACAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGCCCTGCGTGTGATCTCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589867.2
CDS TCA 72 bp CAATTCTCTGTGCTCGACAGTCTTTGCACAACGTTTTaGGCCGCTGCCTTTGGGTGCCATCCCCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QFSVLDSLCTTF*AAAFGCHPLRS
Trigger: GCTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACAGAGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp TGTGCTCGACAGTCTTTGCACAACGTTTTGAGCCGCTaGCTTTGGGTGCCATCCCCTGAGAAGCTGATTCCA +
Preference number: 6 (lower is better)
Translates to: CARQSLHNVLSR*LWVPSPEKLIP
Trigger: TGGAATCAGCTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CCA 72 bp CGACAGTCTTTGCACAACGTTTTGAGCCGCTGCCTTTaGGTGCCATCCCCTGAGAAGCTGATTCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: RQSLHNVLSRCL*VPSPEKLIPQF
Trigger: GAACTGTGGAATCAGCTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000589867.2
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CAA 72 bp GCAATTCTCTGTGCTCGACAGTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTGCCATCCCCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: AILCARQSLHNV*SRCLWVPSPEK
Trigger: CTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACAGAGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS CAA 72 bp TCACACGCAGGGCCCAGGTATCGAGTCAGCTCAACTTaGCTTCGGATCCTGTCTCCTCTGGTAATAGGTGTC +
Preference number: 6 (lower is better)
Translates to: SHAGPRYRVSST*LRILSPLVIGV
Trigger: GACACCTATTACCAGAGGAGACAGGATCCGAAGCAAAGTTGAGCTGACTCGATACCTGGGCCCTGCGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590215.1
CDS CAA 90 bp CGGTTGAAGGCAATTCTCTGTGCTCGACAGTCTTTGCACAACGTTTaGAGCCGCTGCCTTTGGGTGCCATCCCCTGAGAAGCTGATTCCA +
Preference number: 6 (lower is better)
Translates to: RLKAILCARQSLHNV*SRCLWVPSPEKLIP
Trigger: TGGAATCAGCTTCTCAGGGGATGGCACCCAAAGGCAGCGGCTCAAAACGTTGTGCAAAGACTGTCGAGCACAGAGAATTGCCTTCAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000353909.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000585672.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
ENST00000592060.5
CDS GCA 72 bp GTATGGGCCTTTACCTCCCACCACACCATGCCAAACTaGCGGCTATACTTTCAAAACTCAGGGCCCACATCT +
Preference number: 6 (lower is better)
Translates to: VWAFTSHHTMPN*RLYFQNSGPTS
Trigger: AGATGTGGGCCCTGAGTTTTGAAAGTATAGCCGGCAGTTTGGCATGGTGTGGTGGGAGGTAAAGGCCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586884.1
CDS GCA 72 bp CATAGTGGGTATGGGCCTTTACCTCCCACCACACCATaGCAAACTGCCGGCTATACTTTCAAAACTCAGGGC +
Preference number: 6 (lower is better)
Translates to: HSGYGPLPPTTP*QTAGYTFKTQG
Trigger: GCCCTGAGTTTTGAAAGTATAGCCGGCAGTTTGGCATGGTGTGGTGGGAGGTAAAGGCCCATACCCACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586884.1
CDS CAA 72 bp CCACAGCCCACACGCTTAAACATTCTCTGTTCCCGGTaGAAGGCAATTCTCTGTGCTCGACAGTCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: PQPTRLNILCSR*KAILCARQSLH
Trigger: GTGCAAAGACTGTCGAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAATGTTTAAGCGTGTGGGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000269468.10
ENST00000269471.9
ENST00000339998.10
ENST00000347968.7
ENST00000382948.9
ENST00000398488.5
ENST00000398493.5
ENST00000398495.6
ENST00000457839.6
ENST00000585595.5
ENST00000586118.5
ENST00000587605.5
ENST00000588937.5
ENST00000589733.1
ENST00000590208.5
ENST00000591416.5
ENST00000591535.5
CDS CAA 72 bp CCACACCCTCGGCTCTTAAACATTCTCTGTTCCCGGTaGAAGGCAATTCTCTGTGCTCGACAGTCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: PHPRLLNILCSR*KAILCARQSLH
Trigger: GTGCAAAGACTGTCGAGCACAGAGAATTGCCTTCAACCGGGAACAGAGAATGTTTAAGAGCCGAGGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353909.7
ENST00000585672.5
ENST00000592060.5