RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAVS (Homo sapiens)

Ensembl gene IDs: ENSG00000088888

Ensembl transcript IDs: ENST00000416600.6, ENST00000428216.4

Found 1129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCTCCTGGAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATaGAACGGTCTCAGGCTGGGCTGCCAGGATGGGAGGCAGGTCTTG +
Preference number: 1 (lower is better)
Translates to: WAPGEQPPCRSCLPQ*NGLRLGCQDGRQVL
Trigger: CAAGACCTGCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCCAGGAGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp AAGGCAGTTGGGCTCCTGGAGAGCAGCCACCCTGCCGCTCCTGCCTaGCTCAATGCAACGGTCTCAGGCTGGGCTGCCAGGATGGGAGGC +
Preference number: 1 (lower is better)
Translates to: KAVGLLESSHPAAPA*LNATVSGWAARMGG
Trigger: GCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCCAGGAGCCCAACTGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp CCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCTaGCAGGATGGGAGGCAGGTCTTGTGGAGTCGCCCACACACCACA +
Preference number: 1 (lower is better)
Translates to: PCRSCLPQCNGLRLG*QDGRQVLWSRPHTT
Trigger: TGTGGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp ACTCAAGGCAGTTGGGCTCCTGGAGAGCAGCCACCCTGCCGCTCCTaGCTGCCTCAATGCAACGGTCTCAGGCTGGGCTGCCAGGATGGG +
Preference number: 1 (lower is better)
Translates to: TQGSWAPGEQPPCRS*LPQCNGLRLGCQDG
Trigger: CCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCCAGGAGCCCAACTGCCTTGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCTGCCAGGATaGGAGGCAGGTCTTGTGGAGTCGCCCACACACCACATACCTGCC +
Preference number: 1 (lower is better)
Translates to: LLPASMQRSQAGLPG*EAGLVESPTHHIPA
Trigger: GGCAGGTATGTGGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp GCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTTGCCTaGCCTGCCACTTCCTCCCGCCACTTCCACCCTTCCTACCCCTCC +
Preference number: 1 (lower is better)
Translates to: AADAGQEPRASLHFA*PATSSRHFHPSYPS
Trigger: GGAGGGGTAGGAAGGGTGGAAGTGGCGGGAGGAAGTGGCAGGGCAGGCAAAATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp GCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTTaGCTGCCCTGCCACTTCCTCCCGCCACTTCCACCCTTCCTACCC +
Preference number: 1 (lower is better)
Translates to: AGCGCRTRTQGFPSF*LPCHFLPPLPPFLP
Trigger: GGGTAGGAAGGGTGGAAGTGGCGGGAGGAAGTGGCAGGGCAGGCAAAATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp GTACGCTTTCTCAGGTCCCCAAGGATGGGTGGCCAGGTCCCCCACTaGGAGTGGAGGTCTCACTCCCTTCCTTGGGTTCTGACCTCCACA +
Preference number: 1 (lower is better)
Translates to: VRFLRSPRMGGQVPH*EWRSHSLPWVLTST
Trigger: TGTGGAGGTCAGAACCCAAGGAAGGGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCCACCCATCCTTGGGGACCTGAGAAAGCGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp GGGAGGCAGGTCTTGTGGAGTCGCCCACACACCACATACCTGCCCTaGGGCCTTCAGGGACCAATGCAACAGGAGAGGCATTCCCAAGCA +
Preference number: 1 (lower is better)
Translates to: GRQVLWSRPHTTYLP*GLQGPMQQERHSQA
Trigger: TGCTTGGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTGGGCGACTCCACAAGACCTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp AGGATGGGAGGCAGGTCTTGTGGAGTCGCCCACACACCACATACCTaGCCTGAGGCCTTCAGGGACCAATGCAACAGGAGAGGCATTCCC +
Preference number: 1 (lower is better)
Translates to: RMGGRSCGVAHTPHT*PEAFRDQCNRRGIP
Trigger: GGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CTGCCTCTCATGCCCTCAGCTCTACCAGGTTGGGCAGGAGAGAGATaGGAGAAGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAA +
Preference number: 1 (lower is better)
Translates to: LPLMPSALPGWAGER*EKQWPLALGQALGK
Trigger: TTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCTCCCATCTCTCTCCTGCCCAACCTGGTAGAGCTGAGGGCATGAGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CCAACAGTGGGTGAGCTTGGGGTGAGGGAACCTGGCTGCTGGGAGTaGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGAC +
Preference number: 1 (lower is better)
Translates to: PTVGELGVREPGCWE*KRPISSILYSCPVD
Trigger: GTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCACCCCAAGCTCACCCACTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp CAGCCTAGCCTGCCTTGTGCCAAGGACACCCAAGGGCAGAGGGACTaGGCTCTGGGGGAGGACAGATTTGACATAACTGGTCCAGCCTCA +
Preference number: 1 (lower is better)
Translates to: QPSLPCAKDTQGQRD*ALGEDRFDITGPAS
Trigger: TGAGGCTGGACCAGTTATGTCAAATCTGTCCTCCCCCAGAGCTCAGTCCCTCTGCCCTTGGGTGTCCTTGGCACAAGGCAGGCTAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp GTCGCCCACACACCACATACCTGCCCTGAGGCCTTCAGGGACCAATaGAACAGGAGAGGCATTCCCAAGCACCACATGTTCCAGTGGTCC +
Preference number: 1 (lower is better)
Translates to: VAHTPHTCPEAFRDQ*NRRGIPKHHMFQWS
Trigger: GGACCACTGGAACATGTGGTGCTTGGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTGGGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp TTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCCTAGTGGAAGCCCCTaGCTCAGTGGGGCAAACTGCCACTGGACACACCCATCATTCATC +
Preference number: 1 (lower is better)
Translates to: FLPAGRALSGPSGSP*LSGANCHWTHPSFI
Trigger: GATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCCACTGAGGCAGGGGCTTCCACTAGGCCCTGACAGAGCCCTTCCAGCAGGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp CAGCCTCAGCAGCAATCGGACCCAGAACAGTCTGAACTTAGTGGCTaGCAGCTTCTTCCCAATCCCCAGCCACCACACCCCCTCTTCCAA +
Preference number: 1 (lower is better)
Translates to: QPQQQSDPEQSELSG*QLLPNPQPPHPLFQ
Trigger: TTGGAAGAGGGGGTGTGGTGGCTGGGGATTGGGAAGAAGCTGGCAGCCACTAAGTTCAGACTGTTCTGGGTCCGATTGCTGCTGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp TTTCTCAGGTCCCCAAGGATGGGTGGCCAGGTCCCCCACTGGGAGTaGAGGTCTCACTCCCTTCCTTGGGTTCTGACCTCCACATTATCT +
Preference number: 1 (lower is better)
Translates to: FLRSPRMGGQVPHWE*RSHSLPWVLTSTLS
Trigger: AGATAATGTGGAGGTCAGAACCCAAGGAAGGGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCCACCCATCCTTGGGGACCTGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp AGCAGATCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTaGCTTCTCACTGCATCCACACATGGTAGAAGGGACAGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: SRSSVQGGLSASEIR*LLTASTHGRRDRRA
Trigger: AGCCCTTCTGTCCCTTCTACCATGTGTGGATGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp CTCACAGTTTACAGGTCCTGGAGGGTGAGGAAAGTGGGAGCTGGCTaGGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTTGCCTG +
Preference number: 1 (lower is better)
Translates to: LTVYRSWRVRKVGAG*GCRTRTQGFPSFCL
Trigger: CAGGCAAAATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCCTCACCCTCCAGGACCTGTAAACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CAGCCTCACAGTTTACAGGTCCTGGAGGGTGAGGAAAGTGGGAGCTaGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTTG +
Preference number: 1 (lower is better)
Translates to: QPHSLQVLEGEESGS*LRMQDKNPGLPFIL
Trigger: CAAAATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCCTCACCCTCCAGGACCTGTAAACTGTGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp GAGCCAGATACTCACTGTCCACGTGGAGAAGCAAGACCAGAAGTCTaGCATCTGCCAAAGCCACACAGCCCCGGAAGTGAGGGAGCTGAA +
Preference number: 1 (lower is better)
Translates to: EPDTHCPRGEARPEV*HLPKPHSPGSEGAE
Trigger: TTCAGCTCCCTCACTTCCGGGGCTGTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGCTTCTCCACGTGGACAGTGAGTATCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp TTTGACATAACTGGTCCAGCCTCACAGTTTACAGGTCCTGGAGGGTaGGGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGG +
Preference number: 1 (lower is better)
Translates to: FDITGPASQFTGPGG*GKWELAADAGQEPR
Trigger: CCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCCTCACCCTCCAGGACCTGTAAACTGTGAGGCTGGACCAGTTATGTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp GGCTGCTGGGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTaGCCAGTGGACATACCTCTCTCCCCAGCAATTTCTCAAGGCACA +
Preference number: 1 (lower is better)
Translates to: GCWEWKRPISSILYS*PVDIPLSPAISQGT
Trigger: TGTGCCTTGAGAAATTGCTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp ACAACAGAGGAACCCGCTTCGGCCCCTCCTCTGAAGACAGGATCCTaGGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATC +
Preference number: 1 (lower is better)
Translates to: TTEEPASAPPLKTGS*ATPTLNWFKVRDVI
Trigger: GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAGAGGAGGGGCCGAAGCGGGTTCCTCTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CAGCCCCTGATGGCTCTAGTTCTTGTCCCTTGCAGAGCTCAGAAATaGAGGTGGCTCCTGTGCCTTGTCCAGCAATGGTTCCCTGAAAAG +
Preference number: 1 (lower is better)
Translates to: QPLMALVLVPCRAQK*RWLLCLVQQWFPEK
Trigger: CTTTTCAGGGAACCATTGCTGGACAAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCAAGGGACAAGAACTAGAGCCATCAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp GCCCCTCCTCTGAAGACAGGATCCTGCGCTACTCCAACTCTGAACTaGTTCAAGGTGAGAGACGTCATCCACAGAGGCCACAAAACCAAG +
Preference number: 1 (lower is better)
Translates to: APPLKTGSCATPTLN*FKVRDVIHRGHKTK
Trigger: CTTGGTTTTGTGGCCTCTGTGGATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAGAGGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp GACTCCATTCCTAAGAGATGGGAGCAGGAGACATGCTACGGAGTTTaGATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: DSIPKRWEQETCYGV*ILPSTGISACWKGS
Trigger: AGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTCCGTAGCATGTCTCCTGCTCCCATCTCTTAGGAATGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp AGAGAGATGGGAGAAGCAGTGGCCACTTGCTCTGGGCCAGGCACTTaGCAAACACCTGTAGGTTCAATCTCAGAAGAACCCAGTGAAGAA +
Preference number: 1 (lower is better)
Translates to: REMGEAVATCSGPGT*QTPVGSISEEPSEE
Trigger: TTCTTCACTGGGTTCTTCTGAGATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCTCCCATCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CAGCTCTTGGGCTTTGAGGGAAATGATTCAGCGGGAGAAAGAAGGTaGAGAGGGGCTAATATGCAGATACCATTGCTGCAGGTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: QLLGFEGNDSAGERR*RGANMQIPLLQVAL
Trigger: CAGAGCCACCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCCACCTTCTTTCTCCCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp GGGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTaGACATACCTCTCTCCCCAGCAATTTCTCAAGGCACAAGATAAA +
Preference number: 1 (lower is better)
Translates to: GSGNALYPPSCTAAQ*TYLSPQQFLKAQDK
Trigger: TTTATCTTGTGCCTTGAGAAATTGCTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp AACATACAACTGGACAATGGCCAGGCCACATATGACAATAGACTCTaGCCAGAAACCCATGACCAGCCTGGGAAGCCAAGGAAGCCAAAC +
Preference number: 1 (lower is better)
Translates to: NIQLDNGQATYDNRL*PETHDQPGKPRKPN
Trigger: GTTTGGCTTCCTTGGCTTCCCAGGCTGGTCATGGGTTTCTGGCCAGAGTCTATTGTCATATGTGGCCTGGCCATTGTCCAGTTGTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp TCAGAAATGGAGGTGGCTCCTGTGCCTTGTCCAGCAATGGTTCCCTaGAAAGAACCCATAAGGATACCCCCAATCCACCCCAATGTGTTT +
Preference number: 1 (lower is better)
Translates to: SEMEVAPVPCPAMVP*KEPIRIPPIHPNVF
Trigger: AAACACATTGGGGTGGATTGGGGGTATCCTTATGGGTTCTTTTCAGGGAACCATTGCTGGACAAGGCACAGGAGCCACCTCCATTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp CGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTaGACATACAACTGGACAATGGCCAGGCCACATATGACAATAGAC +
Preference number: 1 (lower is better)
Translates to: RWWPLSESIPFLPRD*TYNWTMARPHMTID
Trigger: GTCTATTGTCATATGTGGCCTGGCCATTGTCCAGTTGTATGTTCAGTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp GAGCAAAGAGAGGGCCTTAGGCACAAAATCCTCCAGACCCGCATCTaGCCCTTGGCTTTCTCAACCCTTCACTCTCCAACTTCTATAAAT +
Preference number: 1 (lower is better)
Translates to: EQREGLRHKILQTRI*PLAFSTLHSPTSIN
Trigger: ATTTATAGAAGTTGGAGAGTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGGTCTGGAGGATTTTGTGCCTAAGGCCCTCTCTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp AGGCACTTGGCAAACACCTGTAGGTTCAATCTCAGAAGAACCCAGTaGAGAATGAGCCAGATACTCACTGTCCACGTGGAGAAGCAAGAC +
Preference number: 1 (lower is better)
Translates to: RHLANTCRFNLRRTQ*RMSQILTVHVEKQD
Trigger: GTCTTGCTTCTCCACGTGGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTCTTCTGAGATTGAACCTACAGGTGTTTGCCAAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp TGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTaGATGGACATTTGGGTTGTTTCAGGTTTGGGGCTACAGTCAGCG +
Preference number: 1 (lower is better)
Translates to: CDFTVASTVDGHLGW*MDIWVVSGLGLQSA
Trigger: CGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTaGTGGATGGACATTTGGGTTGTTTCAGGTTTGGGGCTACAGTCA +
Preference number: 1 (lower is better)
Translates to: PCDFTVASTVDGHLG*WMDIWVVSGLGLQS
Trigger: TGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp ATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTTCAGGTTTaGGGCTACAGTCAGCGTGTGGTTAGAAACATTCTTGCCAATGTC +
Preference number: 1 (lower is better)
Translates to: MDIWVGGWTFGLFQV*GYSQRVVRNILANV
Trigger: GACATTGGCAAGAATGTTTCTAACCACACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp TATTATAGCAGGTGGCAGATGTTGGCACACTGGGCAGAGATGTGTTaGTGTGAAAAACCTCTATGTACTTTAAAGACAGGGTCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: YYSRWQMLAHWAEMC*CEKPLCTLKTGSPS
Trigger: AGAGGGAGACCCTGTCTTTAAAGTACATAGAGGTTTTTCACACCAACACATCTCTGCCCAGTGTGCCAACATCTGCCACCTGCTATAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp ATGTTAAATACAAGCGAAGTGATTAACTGGAAGATAGCGTCTGATTaGGAGGAAATCAGTGATTCAGATGGTGTGGGAATGGCACCTGGG +
Preference number: 1 (lower is better)
Translates to: MLNTSEVINWKIASD*EEISDSDGVGMAPG
Trigger: CCCAGGTGCCATTCCCACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAATCACTTCGCTTGTATTTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp CCCCACCTCTTAATGCCATTGCTTTGGGGGTTAGGATTCAACATATaGATTCAAAGGGTACACCTACATTCACAACACAGCACTGACTTA +
Preference number: 1 (lower is better)
Translates to: PHLLMPLLWGLGFNI*IQRVHLHSQHSTDL
Trigger: TAAGTCAGTGCTGTGTTGTGAATGTAGGTGTACCCTTTGAATTCATATGTTGAATCCTAACCCCCAAAGCAATGGCATTAAGAGGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp CTCTTGTTTAGGTGGTTTTTATTTCCACATCTCCAACAGGGAGTCTaGAAACAAACTGACAATACTCGTGAAATCAACACCCAGATGAGG +
Preference number: 1 (lower is better)
Translates to: LLFRWFLFPHLQQGV*KQTDNTREINTQMR
Trigger: CCTCATCTGGGTGTTGATTTCACGAGTATTGTCAGTTTGTTTCCAGACTCCCTGTTGGAGATGTGGAAATAAAAACCACCTAAACAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp TCCTTTGCAAACTTTGACCAAATGGCCTCTCTGCTCTTGTTTAGGTaGTTTTTATTTCCACATCTCCAACAGGGAGTCTGGAAACAAACT +
Preference number: 1 (lower is better)
Translates to: SFANFDQMASLLLFR*FLFPHLQQGVWKQT
Trigger: AGTTTGTTTCCAGACTCCCTGTTGGAGATGTGGAAATAAAAACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp AAATACAAGCAATCATGGCTGACTCCTTTGCAAACTTTGACCAAATaGCCTCTCTGCTCTTGTTTAGGTGGTTTTTATTTCCACATCTCC +
Preference number: 1 (lower is better)
Translates to: KYKQSWLTPLQTLTK*PLCSCLGGFYFHIS
Trigger: GGAGATGTGGAAATAAAAACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 90 bp GTAATTCTTTCACCAATTACCAGTTTATCTCTTCTCCAATTCCTTTaGATACGCCTCCTGCAAGAAGCCGATTTCCAGCTGTATGTGATA +
Preference number: 1 (lower is better)
Translates to: VILSPITSLSLLQFL*IRLLQEADFQLYVI
Trigger: TATCACATACAGCTGGAAATCGGCTTCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAGAGATAAACTGGTAATTGGTGAAAGAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp CTACATTCACAACACAGCACTGACTTAGATTCCCTGCAAAACCCATaGGAGTTTCATTTCCTCCATATTTTCATCAGCATTTCATCTTGT +
Preference number: 1 (lower is better)
Translates to: LHSQHSTDLDSLQNP*EFHFLHIFISISSC
Trigger: ACAAGATGAAATGCTGATGAAAATATGGAGGAAATGAAACTCTCATGGGTTTTGCAGGGAATCTAAGTCAGTGCTGTGTTGTGAATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 90 bp CTTGATGATGAGGACTCTGACCTCTTTTGCTTGACCTCATGTCTGTaGAATTTATCCATGTTGCTGTGCATAGCGATATTTTCATTCATA +
Preference number: 1 (lower is better)
Translates to: LDDEDSDLFCLTSCL*NLSMLLCIAIFSFI
Trigger: TATGAATGAAAATATCGCTATGCACAGCAACATGGATAAATTTCACAGACATGAGGTCAAGCAAAAGAGGTCAGAGTCCTCATCATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 90 bp TCTTTGCCGTATTATTCTGTGTCACTGAGGCCTATCACAGTGCTCTaGACATGTAGGTGCAAATATCTGTTGTATGATTACATAAAAGAA +
Preference number: 1 (lower is better)
Translates to: SLPYYSVSLRPITVL*TCRCKYLLYDYIKE
Trigger: TTCTTTTATGTAATCATACAACAGATATTTGCACCTACATGTGCAGAGCACTGTGATAGGCCTCAGTGACACAGAATAATACGGCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCCAGTGGGGAAGGTCTaGAGCACTGGGGGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ESSHPAAPACLNATVSGWPVGKV*STGGSP
Trigger: TGGGCTGCCCCCAGTGCTCCAGACCTTCCCCACTGG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGCAACGGTCTCAGGCTaGGCTGCCAGGATGGGAGGC +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPATVSG*AARMGG
Trigger: GCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCCTCTGCCTGAGCTCTaGCCACCAGGTGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPPLPEL*PPGVSS
Trigger: GGAGGAGACACCTGGTGGGCAGAGCTCAGGCAGAGG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGCGGGGCTAGGGGACTaGGAAGGTCCCTCAACCCTT +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPAGLGD*EGPSTL
Trigger: AAGGGTTGAGGGACCTTCCCAGTCCCCTAGCCCCGC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCCCTTAACTCCCCTCTaGCCCAGCCTCCACAATCCC +
Preference number: 2 (lower is better)
Translates to: ESSHPAAPACLNATVSGWPLTPL*PSLHNP
Trigger: GGGATTGTGGAGGCTGGGTCAGAGGGGAGTTAAGGG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGACCACATACCTGCCCTaGGGCCTTCAGGGACCAATG +
Preference number: 2 (lower is better)
Translates to: ESSHPAAPACLNATVSGWTTYLP*GLQGPM
Trigger: CATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCAGGAACGGAACAGATaGGTGGTGGGAAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: ESSHPAAPACLNATVSGWQERNR*VVGRAQ
Trigger: CTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTGGGTGAGCTTGGGGTaGGGGAACCTGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHWVSLG*GNLAAG
Trigger: CCCAGCAGCCAGGTTCCCTCACCCCAAGCTCACCCA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGAAGGTCTGGAGCACTaGGGGCAGCCCAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAEGLEH*GQPRTQ
Trigger: CTGGGTCCTGGGCTGCCCCCAGTGCTCCAGACCTTC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGAACCTGGATTGCCAGTaGGGAAGGTCTGGAGCACTG +
Preference number: 2 (lower is better)
Translates to: ESSHPAAPACLNATVSGWNLDCQ*GRSGAL
Trigger: CAGTGCTCCAGACCTTCCCCACTGGCAATCCAGGTT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGCAGGTGGCAGATGTTaGCACACTGGGCAGAGATGT +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPAGGRC*HTGQRC
Trigger: ACATCTCTGCCCAGTGTGCCAACATCTGCCACCTGC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCTCCCCAACAGTGGGTaGGCTTGGGGTGAGGGAACC +
Preference number: 2 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWLPNSG*AWGEGT
Trigger: GGTTCCCTCACCCCAAGCTCACCCACTGTTGGGGAG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATCTGCCCCTAAGCACTaGGGAGGGCACTGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTASAPKH*GGHWSL
Trigger: GAGGGACCAGTGCCCTCCTCAGTGCTTAGGGGCAGA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGGCCTAGGCTGCCTGTaGTGCAGAGCTGCACCCTTG +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHGLGCL*CRAAPL
Trigger: CAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAGGCC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGACGATCCTAGCTCACTaGAGCTTCAAGCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPTILAH*SFKLLG
Trigger: GCCCAGAAGCTTGAAGCTGCAGTGAGCTAGGATCGT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGGAACAGATGGGTGGTaGGAAGAGCCCAGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTGTDGW*EEPRAS
Trigger: TGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCCCTACTGTACTGGTaGGTGGTGGGAGGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHPLLYW*VVGGGS
Trigger: TGAGCCCCCTCCCACCACCCACCAGTACAGTAGGGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCCTTAACTCCCCTCTaGCCCAGCCTCCACAATCCC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHPLTPL*PSLHNP
Trigger: GGGATTGTGGAGGCTGGGTCAGAGGGGAGTTAAGGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTGGCCAGGCTGGTCTTaGACTCCAGACCTCAGGCGA +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHWPGWS*TPDLRR
Trigger: TCGCCTGAGGTCTGGAGTTCAAGACCAGCCTGGCCA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGATGATAACCTGGATTaGCAGTGGGGAAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPDDNLD*QWGRSG
Trigger: TCCAGACCTTCCCCACTGGCAATCCAGGTTATCATC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTCCTGCCTGCCTCAATaGAACGGTCTCAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHSCLPQ*NGLRLG
Trigger: GCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCTGCCGCTCCTGCCTaGCTCAATGCAACGGTCTCA +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHPAAPA*LNATVS
Trigger: TGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCAGACCTTCCCAGGATTaGCCAGCAGGGGAGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GVETPYILHPVQLPSGHTRPSQD*PAGEGA
Trigger: GGCCCCCTCCCCTGCTGGGCAATCCTGGGAAGGTCT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGAAGCAGTGGCCACTTaGTCTGGGCCAGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWEAVAT*SGPGTW
Trigger: CCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCTCGGCTTCCCAAAATaGTGGGATTACAGGCACAAG +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPLGFPK*WDYRHK
Trigger: CTTGTGCCTGTAATCCCAGCATTTTGGGAAGCCGAG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATTAGGCTGTGTCCCCTaGCCCACCTCGCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILGCVP*PTSPSL
Trigger: CAGGCTGGGCGAGGTGGGGCAGGGGACACAGCCTAA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGAAGGTCTGGAGCACTaGGGGCAGCCCAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDEGLEH*GQPRTQ
Trigger: CTGGGTCCTGGGCTGCCCCCAGTGCTCCAGACCTTC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCCAGTGGGGAAGGTCTaGAGCACTGGGGGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GVETPYILHPVQLPSGHTPVGKV*STGGSP
Trigger: TGGGCTGCCCCCAGTGCTCCAGACCTTCCCCACTGG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGCAACGGTCTCAGGCTaGGCTGCCAGGATGGGAGGC +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDATVSG*AARMGG
Trigger: GCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACAGGGTGTAGATCCCTaGAGGCTGACGGCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAQGVDP*RLTAWG
Trigger: ACCCCAAGCCGTCAGCCTCCAGGGATCTACACCCTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGGTAGGGTCCACTCCTaGTTCCAGGGTGCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAGRVHS*FQGAGC
Trigger: GCAACCTGCACCCTGGAACCAGGAGTGGACCCTACC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATACCACATACCTGCCCTaGGGCCTTCAGGGACCAATG +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHTTYLP*GLQGPM
Trigger: CATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGATCCAAACCTCTGCCTaGGCTCTGCCCACCAGGTGT +
Preference number: 2 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWIQTSA*ALPTRC
Trigger: ACACCTGGTGGGCAGAGCTCAGGCAGAGGTTTGGAT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTCTGCCCCTAAGCACTaGGGAGGGCACTGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDSAPKH*GGHWSL
Trigger: GAGGGACCAGTGCCCTCCTCAGTGCTTAGGGGCAGA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGATTACTGAAGTTGGGTaGTGGGCTCATGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPITEVG*WAHGDL
Trigger: CAAATCCCCATGAGCCCATCACCCAACTTCAGTAAT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCACCCTGCCGCTCCTaGCTGCCTCAATGCAACGGT +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIPPCRS*LPQCNG
Trigger: ACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCCACCCTGCCGCTCCTaGCTGCCTCAATGCAACGGT +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDPPCRS*LPQCNG
Trigger: ACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGAGGGTCTTGCTTTGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPRVLLC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGGCAACAAAGCAAGACCCT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACCACACAAGGCACCGTaGGGACAGAGATGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAPHKAP*GQRCCS
Trigger: AGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTGCCTTGTCCAGCAATaGTTCCCTGAAAAGAACCCA +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPCLVQQ*FPEKNP
Trigger: TGGGTTCTTTTCAGGGAACCATTGCTGGACAAGGCA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGCTGACGGCTTGGGGTaGGGCCACAGTGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSADGLG*GHSEPS
Trigger: GCTGGGCTCACTGTGGCCCCACCCCAAGCCGTCAGC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGCCAGGTCCCCCACTaGGAGTGGAGGTCTCACTCC +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGQVPH*EWRSHS
Trigger: GGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCACTGGTCCCTCTaGCCCCACCCAGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGHWSL*PHPAFT
Trigger: GGTGAAGGCTGGGTGGGGCCAGAGGGACCAGTGCCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp TCACCTCTCTGGGACAGTAGTAGCAGCCAGGCACCTCCAAAGAGCTaGACAACAGAGGAACCCGCTTCGGCCCCTCCTCTGAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: SPLWDSSSSQAPPKS*TTEEPASAPPLKTG
Trigger: TCCTGTCTTCAGAGGAGGGGCCGAAGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTGCCTGGCTGCTACTACTGTCCCAGAGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCCAGCAATGGTTCCCTaGAAAGAACCCATAAGGATA +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPPAMVP*KEPIRI
Trigger: TATCCTTATGGGTTCTTTTCAGGGAACCATTGCTGG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGCGGGAGAATGGCCTaGACCCAGGAGGTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGGRMA*TQEVEV
Trigger: GACCTCCACCTCCTGGGTTCAGGCCATTCTCCCGCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGCAGCTCCCCGCAGCTaGAAGCCACACTCTCAACAC +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIAAPRS*KPHSQH
Trigger: GTGTTGAGAGTGTGGCTTTCAGCTGCGGGGAGCTGC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAGCAGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTASRRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTTCGGCCCCTCCTCTaGAGACAGGATCCTGCGCTA +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILRPLL*RQDPAL
Trigger: TAGCGCAGGATCCTGTCTTCAGAGGAGGGGCCGAAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTGGCCAGAAACCCATaGCCAGCCTGGGAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLARNP*PAWEAK
Trigger: CTTGGCTTCCCAGGCTGGTCATGGGTTTCTGGCCAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTCCTGCTGCCAGGCCTaGAGTCCCTTAACTCCCCTC +
Preference number: 2 (lower is better)
Translates to: GVETPYILHPVQLPSGHTSCCQA*SPLTPL
Trigger: GAGGGGAGTTAAGGGACTGCAGGCCTGGCAGCAGGA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATCCTGCCTGCCTCAATaGAACGGTCTCAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISCLPQ*NGLRLG
Trigger: GCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGAGAGCAGCCACCCTaGCGCTCCTGCCTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGEQPP*RSCLPQ
Trigger: TTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACAGAAGTCTGACATCTaGCAAAGCCACACAGCCCCG +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAQKSDI*QSHTAP
Trigger: CGGGGCTGTGTGGCTTTGGCAGATGTCAGACTTCTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGCCTAGGCTGCCTGTaGTGCAGAGCTGCACCCTTG +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGLGCL*CRAAPL
Trigger: CAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAGGCC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCCACCCCTAATGCCTaGCCCCACTTCATATTCCAG +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHATPNA*PHFIFQ
Trigger: CTGGAATATGAAGTGGGGGCAGGCATTAGGGGTGGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATGGCTTCAAGTGATCTaGCCCCTGCCAGCATCCCAA +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAWLQVI*PLPASQ
Trigger: TTGGGATGCTGGCAGGGGGCAGATCACTTGAAGCCA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGTAGGGTCCACTCCTaGTTCCAGGGTGCAGGTTGC +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGRVHS*FQGAGC
Trigger: GCAACCTGCACCCTGGAACCAGGAGTGGACCCTACC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGCCAGGTCCCCCACTaGGAGTGGAGGTCTCACTCC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGQVPH*EWRSHS
Trigger: GGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGAGCAGTGACAGCTCTTaGGCTTTGAGGGAAATGATT +
Preference number: 2 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSSDSS*ALREMI
Trigger: AATCATTTCCCTCAAAGCCCAAGAGCTGTCACTGCT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp TCAGCGGGAGAAAGAAGGTGGAGAGGGGCTAATATGCAGATACCATaGCTGCAGGTGGCTCTGCCCCTAAGCACTGAGGAGGGCACTGGT +
Preference number: 2 (lower is better)
Translates to: SAGERRWRGANMQIP*LQVALPLSTEEGTG
Trigger: ACCAGTGCCCTCCTCAGTGCTTAGGGGCAGAGCCACCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCCACCTTCTTTCTCCCGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp TACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTaGCCGTATTATTCTGTGTCACTGAGGCCTATCACAGTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: YCTGGWWEGAHRVGS*PYYSVSLRPITVLC
Trigger: GCAGAGCACTGTGATAGGCCTCAGTGACACAGAATAATACGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGCAAGACCAGAAGTCTaGCATCTGCCAAAGCCACAC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAARPEV*HLPKPH
Trigger: GTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGGTCACAGAGCTGGTaGGAGGCAGGTTGGGACGCA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQRSQSW*EAGWDA
Trigger: TGCGTCCCAACCTGCCTCTCACCAGCTCTGTGACCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGAGGTTGCAGTGAGCTaGGATCATGCCACTACACTC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAEVAVS*DHATTL
Trigger: GAGTGTAGTGGCATGATCTCAGCTCACTGCAACCTC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGTGGGACTCAAGGCCTaGAGGACTCCATTCCTAAGA +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAVGLKA*RTPFLR
Trigger: TCTTAGGAATGGAGTCCTTCAGGCCTTGAGTCCCAC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAATGCCCAGCACCGAATaGGGCCTTCATAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIMPSTE*GLHSLG
Trigger: CCCAAGGCTATGAAGGCCTCATTCGGTGCTGGGCAT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCAAGGCATGTCCTGCTaGCAGGCCTGCAGTCCCTTA +
Preference number: 2 (lower is better)
Translates to: GVETPYILHPVQLPSGHTQGMSC*QACSPL
Trigger: TAAGGGACTGCAGGCCTGGCAGCAGGACATGCCTTG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCAGCCAAGGCATGTCCTaGTGCCAGGCCTGCAGTCCC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVISQGMS*CQACSP
Trigger: GGGACTGCAGGCCTGGCAGCAGGACATGCCTTGGCT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTCCAGTGGTCCCTCCTaGTCCACCTGGGCCAACAGG +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVISSGPS*STWANR
Trigger: CCTGTTGGCCCAGGTGGAGCAGGAGGGACCACTGGA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCCTCTGCCTGAGCTCTaGCCACCAGGTGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIPLPEL*PPGVSS
Trigger: GGAGGAGACACCTGGTGGGCAGAGCTCAGGCAGAGG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGACCACTGTGCACTCTaGCTCTCATGCCCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIDHCAL*LSCPQL
Trigger: GAGCTGAGGGCATGAGAGGCAGAGTGCACAGTGGTC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCTGTGCTGCAGAGCTaGACCCTTGACCACTGTGCA +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIPVLQS*TLDHCA
Trigger: TGCACAGTGGTCAAGGGTGCAGCTCTGCAGCACAGG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTCCATCCTGTACAGCTaGCCAGTGGACATACCTCTC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHSILYS*PVDIPL
Trigger: GAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAATATGCAGATACCATTaGTGCAGGTGGCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAICRYH*CRWLCP
Trigger: GGGGCAGAGCCACCTGCAGCAATGGTATCTGCATAT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATATATGCAGATACCATTaGTGCAGGTGGCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHICRYH*CRWLCP
Trigger: GGGGCAGAGCCACCTGCAGCAATGGTATCTGCATAT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGAACAGATGGGTGGTaGGAAGAGCCCAGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGTDGW*EEPRAS
Trigger: TGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACAGGAACGGAACAGATaGGTGGTGGGAAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIQERNR*VVGRAQ
Trigger: CTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATGCAGAGCTCAGAAATaGAGGTGGCTCCTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTACRAQK*RWLLCL
Trigger: AAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCAGGGTGTAGATCCCTaGAGGCTGACGGCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQQGVDP*RLTAWG
Trigger: ACCCCAAGCCGTCAGCCTCCAGGGATCTACACCCTG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAAGCCCCTGCCTCAGTaGGGCAAACTGCCACTGGAC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQKPLPQ*GKLPLD
Trigger: GTCCAGTGGCAGTTTGCCCCACTGAGGCAGGGGCTT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTGATCTCAGACTCCTaGCTTCAAGTGATCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALISDS*LQVICP
Trigger: GGGGCAGATCACTTGAAGCCAGGAGTCTGAGATCAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTA +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDRRRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCAGCTCACTGCAACCTCCGCCT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATTAGACCAAGGACTCTaGACTCACTTTCCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALDQGL*THFPWR
Trigger: CCTCCAGGGAAAGTGAGTTCAGAGTCCTTGGTCTAA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGATGATAACCTGGATTaGCAGTGGGGAAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWDDNLD*QWGRSG
Trigger: TCCAGACCTTCCCCACTGGCAATCCAGGTTATCATC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCACACACCACATACCTaGCCTGAGGCCTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGHTPHT*PEAFRD
Trigger: GTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGAAGCAGTGGCCACTTaGTCTGGGCCAGGCACTTGG +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSEAVAT*SGPGTW
Trigger: CCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCCTGTGCTGCAGAGCTaGACCCTTGACCACTGTGCA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQPVLQS*TLDHCA
Trigger: TGCACAGTGGTCAAGGGTGCAGCTCTGCAGCACAGG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGTGAGGGAACCTGGCTaGTGGGAGTGGAAACGCCCT +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSVREPG*WEWKRP
Trigger: AGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCAC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTCCTGGTTCCAGGGTaGAGGTTGCTGGACTTGGAG +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLLVPG*RLLDLE
Trigger: CTCCAAGTCCAGCAACCTGCACCCTGGAACCAGGAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGCCACCCCTAATGCCTaGCCCCACTTCATATTCCAG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIATPNA*PHFIFQ
Trigger: CTGGAATATGAAGTGGGGGCAGGCATTAGGGGTGGC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTCTGAACTTAGTGGCTaGCAGCTTCTTCCCAATCCC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHSELSG*QLLPNP
Trigger: GGGATTGGGAAGAAGCTGGCAGCCACTAAGTTCAGA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGAACTCAAGGCAGTTaGGCTCCTGGAGAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGTQGS*APGEQP
Trigger: TGGCTGCTCTCCAGGAGCCCAACTGCCTTGAGTTCC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGTGGCCACTTGCTCTaGGCCAGGCACTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSGHLL*ARHLAN
Trigger: GTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATGGGCAGGAGAGAGATaGGAGAAGCAGTGGCCACTT +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIWAGER*EKQWPL
Trigger: AAGTGGCCACTGCTTCTCCCATCTCTCTCCTGCCCA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAGGGAACCTGGCTGCTaGGAGTGGAAACGCCCTATA +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIREPGC*EWKRPI
Trigger: TATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTTGTCTCAAACTCCTaGCTTCAAGGGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALVSNS*LQGILP
Trigger: TGGGAGGATCCCTTGAAGCCAGGAGTTTGAGACAAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCCACCTCGCCCAGCCTaGGGCATTGAGCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCPPRPA*GIEPGW
Trigger: CCAGCCAGGCTCAATGCCCCAGGCTGGGCGAGGTGG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCATCCAAACCTCTGCCTaGGCTCTGCCCACCAGGTGT +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIIQTSA*ALPTRC
Trigger: ACACCTGGTGGGCAGAGCTCAGGCAGAGGTTTGGAT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCTAGGGCAGTGGAGTaGAAAAGCTGTAGCAGCCAA +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIPRAVE*KSCSSQ
Trigger: TTGGCTGCTACAGCTTTTTCACTCCACTGCCCTAGG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAGATCATTAGGTTGCTaGACTCCCCTAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIRSLGC*TPLGQW
Trigger: CCACTGCCCTAGGGGAGTTCAGCAACCTAATGATCT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAGATCATTAGGTTGCTaGACTCCCCTAGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDRSLGC*TPLGQW
Trigger: CCACTGCCCTAGGGGAGTTCAGCAACCTAATGATCT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGCGGGAGAATGGCCTaGACCCAGGAGGTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGGRMA*TQEVEV
Trigger: GACCTCCACCTCCTGGGTTCAGGCCATTCTCCCGCC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCCTTCACCCCAAGGTaGAGTACGCTTTCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQAFTPR*STLSQV
Trigger: GACCTGAGAAAGCGTACTTCACCTTGGGGTGAAGGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGTGGGACTCAAGGCCTaGAGGACTCCATTCCTAAGA +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDVGLKA*RTPFLR
Trigger: TCTTAGGAATGGAGTCCTTCAGGCCTTGAGTCCCAC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCCAGTGGTCCCTCCTaGTCCACCTGGGCCAACAGG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSSGPS*STWANR
Trigger: CCTGTTGGCCCAGGTGGAGCAGGAGGGACCACTGGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCCTTCAGGGACCAATaGAACAGGAGAGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQAFRDQ*NRRGIP
Trigger: GGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCACACACCACATACCTaGCCTGAGGCCTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIHTPHT*PEAFRD
Trigger: GTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGCTTTCCCCACCAAGTaGAGCTCCCCGCAGCTGAAA +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSAFPTK*SSPQLK
Trigger: TTTCAGCTGCGGGGAGCTGCACTTGGTGGGGAAAGC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGCAGTGAGCCGAAGTTaGACCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSAVSRS*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAACTTCGGCTCACTGC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCTGCTCTCAGGACTTaGTTCAGCCAAGGCATGTCC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQAALRT*FSQGMS
Trigger: GGACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTGCCTTGTCCAGCAATaGTTCCCTGAAAAGAACCCA +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHCLVQQ*FPEKNP
Trigger: TGGGTTCTTTTCAGGGAACCATTGCTGGACAAGGCA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTGCAGAGCTCAGAAATaGAGGTGGCTCCTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDCRAQK*RWLLCL
Trigger: AAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAATTAGTCGGGTGTGGTaGCAGGCCTCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIISRVW*QASVIP
Trigger: TGGGATTACAGAGGCCTGCCACCACACCCGACTAAT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCAGGTCCCCAAGGATaGGTGGCCAGGTCCCCCACT +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSGPQG*VARSPT
Trigger: AGTGGGGGACCTGGCCACCCATCCTTGGGGACCTGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATTACTTCATGCTGTCTaGGAGCAAAGAGAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALLHAV*EQREGL
Trigger: AAGGCCCTCTCTTTGCTCCCAGACAGCATGAAGTAA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGGGCAAACTGCCACTaGACACACCCATCATTCATC +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGANCH*THPSFI
Trigger: GATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGGCTTCCTGAGGCCTaGCATTTTAGGCTGTGTCCC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQWLPEA*HFRLCP
Trigger: GGGACACAGCCTAAAATGCCAGGCCTCAGGAAGCCA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCCCCTACTGTACTGGTaGGTGGTGGGAGGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWPLLYW*VVGGGS
Trigger: TGAGCCCCCTCCCACCACCCACCAGTACAGTAGGGG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTCTCAGCCTCCCGAGTaGCTGAAATTACAGATGTAC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHSQPPE*LKLQMY
Trigger: GTACATCTGTAATTTCAGCCACTCGGGAGGCTGAGA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGAACCCAGTGAAGAATaGGCCAGATACTCACTGTCC +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIEPSEE*ARYSLS
Trigger: GGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGAACCCAGTGAAGAATaGGCCAGATACTCACTGTCC +
Preference number: 2 (lower is better)
Translates to: GVETPYILHPVQLPSGHTEPSEE*ARYSLS
Trigger: GGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCCTAGGGCAGTGGAGTaGAAAAGCTGTAGCAGCCAA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQPRAVE*KSCSSQ
Trigger: TTGGCTGCTACAGCTTTTTCACTCCACTGCCCTAGG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAATGGTGACAGGTACCTaGAGTCCTAGTTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAMVTGT*SPSYSE
Trigger: TTCTGAGTAACTAGGACTTCAGGTACCTGTCACCAT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACGCAGGTGGAGCACTTaGGGTCAGGAGTTCAAGAAC +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSRRWST*GQEFKN
Trigger: GTTCTTGAACTCCTGACCTCAAGTGCTCCACCTGCG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTTGAGCGGCATCATTTaGAAAGTGCTGGGATCAGCC +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLSGII*KVLGSA
Trigger: GGCTGATCCCAGCACTTTTCAAATGATGCCGCTCAA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGAGAGGCCTTCAGGTTaGCAACAGCAGCAACAAGTT +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIERPSG*QQQQQV
Trigger: AACTTGTTGCTGCTGTTGTCAACCTGAAGGCCTCTC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTCAACACAGGACTCCTaGGATCTGACACTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDSTQDS*DLTLAN
Trigger: ATTGGCCAGTGTCAGATCTCAGGAGTCCTGTGTTGA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCCCTTCCTTGGGTTCTaGCCTCCACATTATCTGGCT +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGPFLGF*PPHYLA
Trigger: AGCCAGATAATGTGGAGGTCAGAACCCAAGGAAGGG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCACCTCCAAAGAGCTTaGCAACAGAGGAACCCGCTT +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGHLQRA*QQRNPL
Trigger: AAGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGCCTCCCGAGTGGCTaGAATTACAGATGTACGCCA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSLPSG*NYRCTP
Trigger: TGGCGTACATCTGTAATTTCAGCCACTCGGGAGGCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGCCTTCAGGGACCAATaGAACAGGAGAGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIAFRDQ*NRRGIP
Trigger: GGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGTGAGGGAACCTGGCTaGTGGGAGTGGAAACGCCCT +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWVREPG*WEWKRP
Trigger: AGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCAC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGCGCTCGGCCCATGTTaGCTTTTTGAGATACTTTTT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAALGPC*LFEILF
Trigger: AAAAAGTATCTCAAAAAGGCAACATGGGCCGAGCGC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAAAGAAAAGAACCTCTaGAGAATGAGGGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHKEKNL*RMRGSR
Trigger: CCTGCTTCCCCTCATTCTGCAGAGGTTCTTTTCTTT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTCCTCTGGAGGACATaGATGATAACCTGGATTGCC +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILLWRT*MITWIA
Trigger: GGCAATCCAGGTTATCATCCATGTCCTCCAGAGGAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTGTACAGCTGCCCAGTaGACATACCTCTCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVICTAAQ*TYLSPQ
Trigger: CTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTGACCTGCCCAGCATaGGTACCTAACTGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLTCPA*VPNWGL
Trigger: TAAACCCCAGTTAGGTACCCATGCTGGGCAGGTCAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGCGGGGCTAGGGGACTaGGAAGGTCCCTCAACCCTT +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCAGLGD*EGPSTL
Trigger: AAGGGTTGAGGGACCTTCCCAGTCCCCTAGCCCCGC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGGCACTGGTCCCTCTaGCCCCACCCAGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVGHWSL*PHPAFT
Trigger: GGTGAAGGCTGGGTGGGGCCAGAGGGACCAGTGCCC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTGGGTGATGGGCTCATaGGGATTTGTTATTCTACTC +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHWVMGS*GFVILL
Trigger: GAGTAGAATAACAAATCCCCATGAGCCCATCACCCA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATGGGTGATGGGCTCATaGGGATTTGTTATTCTACTC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAWVMGS*GFVILL
Trigger: GAGTAGAATAACAAATCCCCATGAGCCCATCACCCA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp CTCCTTTTACAGGTGAGAAAACTAAGGGACAGACAGATAAATCCCTaGCCCAAGGTCACAGAGCTGGTGAGAGGCAGGTTGGGACGCAGG +
Preference number: 2 (lower is better)
Translates to: LLLQVRKLRDRQINP*PKVTELVRGRLGRR
Trigger: CCTGCGTCCCAACCTGCCTCTCACCAGCTCTGTGACCTTGGGCAAGGGATTTATCTGTCTGTCCCTTAGTTTTCTCACCTGTAAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp TTCTTGTCCCTTGCAGAGCTCAGAAATGGAGGTGGCTCCTGTGCCTaGTCCAGCAATGGTTCCCTGAAAAGAACCCATAAGGATACCCCC +
Preference number: 2 (lower is better)
Translates to: FLSLAELRNGGGSCA*SSNGSLKRTHKDTP
Trigger: GGGGGTATCCTTATGGGTTCTTTTCAGGGAACCATTGCTGGACAAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCAAGGGACAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp ACGCATTCTTCCCAGGGAGAAAGAAGCAGTGACAGCTCTTGGGCTTaGAGGGAAATGATTCAGCGGGAGAAAGAAGGTGGAGAGGGGCTA +
Preference number: 2 (lower is better)
Translates to: THSSQGERSSDSSWA*REMIQREKEGGEGL
Trigger: TAGCCCCTCTCCACCTTCTTTCTCCCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTGTCACTGCTTCTTTCTCCCTGGGAAGAATGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp GGCCTTAAAGAACGAAGAATGTTTGTGGGTGTAGTAAGCAATGACTaGGAGCAGAGCCCTCTAGCCATTGGGCTCACCCTCACAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GLKERRMFVGVVSND*EQSPLAIGLTLTGR
Trigger: CCTGCCTGTGAGGGTGAGCCCAATGGCTAGAGGGCTCTGCTCCAAGTCATTGCTTACTACACCCACAAACATTCTTCGTTCTTTAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGTCTTCCTCAGGCCTaGCAGCTGCCCCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVGLPQA*QLPLAS
Trigger: GGAAGCCAGGGGCAGCTGTCAGGCCTGAGGAAGACC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTAGGTCACAGAGCTGGTaGGAGGCAGGTTGGGACGCA +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCRSQSW*EAGWDA
Trigger: TGCGTCCCAACCTGCCTCTCACCAGCTCTGTGACCT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTTGAGCGGCATCATTTaGAAAGTGCTGGGATCAGCC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLSGII*KVLGSA
Trigger: GGCTGATCCCAGCACTTTTCAAATGATGCCGCTCAA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTCAACACAGGACTCCTaGGATCTGACACTGGCCAAT +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSTQDS*DLTLAN
Trigger: ATTGGCCAGTGTCAGATCTCAGGAGTCCTGTGTTGA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGAAAGAAGCAGTaGCAGCTCTTGGGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGRKKQ*QLLGFE
Trigger: CTCAAAGCCCAAGAGCTGTCACTGCTTCTTTCTCCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACATTACTGAAGTTGGGTaGTGGGCTCATGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDITEVG*WAHGDL
Trigger: CAAATCCCCATGAGCCCATCACCCAACTTCAGTAAT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTGTTAGCAACAGAGTaGGGAATGCTAGGAGTGACC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLLATE*GMLGVT
Trigger: GGTCACTCCTAGCATTCCTCACTCTGTTGCTAACAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCTGACCTCTTTTGCTTaGCCTCATGTCTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: GKWELAADAGQEPRASLHLTSFA*PHVCEI
Trigger: AATTTCACAGACATGAGGTCAAGCAAAAGAGGTCAG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGGGGCCAGGTGTACTaGAGGAACGGAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWRGQVY*RNGTDG
Trigger: CCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTGGGGACAGAGATGCTaGTCTCAGGACTTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIWGQRC*SQDLVQ
Trigger: CTGAACCAAGTCCTGAGAGCAGCATCTCTGTCCCCA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCACGATCCTAGCTCACTaGAGCTTCAAGCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVITILAH*SFKLLG
Trigger: GCCCAGAAGCTTGAAGCTGCAGTGAGCTAGGATCGT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTCCTGGTTCCAGGGTaGAGGTTGCTGGACTTGGAG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLLVPG*RLLDLE
Trigger: CTCCAAGTCCAGCAACCTGCACCCTGGAACCAGGAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTCAACCCTTTCTACATaGCTTACCCAGGGTATCTCC +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDSTLST*LTQGIS
Trigger: GGAGATACCCTGGGTAAGGCATGTAGAAAGGGTTGA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGGCCAATTCACACCCTaGTTGAAGCTGGCATTTGAG +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQGQFTP*LKLAFE
Trigger: CTCAAATGCCAGCTTCAAGCAGGGTGTGAATTGGCC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGGAGAGGGGCTAATATaGAGATACCATTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQGEGLI*RYHCCR
Trigger: CCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACCTATCACAGTGCTCTaGACATGTAGGTGCAAATAT +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAPITVL*TCRCKY
Trigger: ATATTTGCACCTACATGTGCAGAGCACTGTGATAGG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCTTCAGAGATACGGTaGCTTCTCACTGCATCCACA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQASEIR*LLTAST
Trigger: TGTGGATGCAGTGAGAAGGCACCGTATCTCTGAAGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCTGCCTTTGACCCCTaGCAAATACAAGCAATCATG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIPAFDP*QIQAIM
Trigger: CATGATTGCTTGTATTTGGCAGGGGTCAAAGGCAGG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACATGGATGATAACCTaGATTGCCAGTGGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTWMIT*IASGEG
Trigger: ACCTTCCCCACTGGCAATCCAGGTTATCATCCATGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAACATGGATGATAACCTaGATTGCCAGTGGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESITWMIT*IASGEG
Trigger: ACCTTCCCCACTGGCAATCCAGGTTATCATCCATGT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTCCTCTGGAGGACATaGATGATAACCTGGATTGCC +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLLWRT*MITWIA
Trigger: GGCAATCCAGGTTATCATCCATGTCCTCCAGAGGAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGGAGGAAGCTCCTCTaGAGGACATGGATGATAACC +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGRRKLL*RTWMIT
Trigger: GGTTATCATCCATGTCCTCCAGAGGAGCTTCCTCCT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTACTCACTGTCCACGTaGAGAAGCAAGACCAGAAGT +
Preference number: 2 (lower is better)
Translates to: SSGHLLWARHLANTCRFNYSLST*RSKTRS
Trigger: ACTTCTGGTCTTGCTTCTCCACGTGGACAGTGAGTA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGTGGCCACTTGCTCTaGGCCAGGCACTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSGHLL*ARHLAN
Trigger: GTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGCCTCCTGAATAGCTaGGATTACAGACGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSLLNS*DYRRLP
Trigger: TGGCAGACGTCTGTAATCCCAGCTATTCAGGAGGCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTTGTCTCAAACTCCTaGCTTCAAGGGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLVSNS*LQGILP
Trigger: TGGGAGGATCCCTTGAAGCCAGGAGTTTGAGACAAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACACAAAACCAAGAGGTaGATGCCTCATTGTTACTTC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAHKTKR*MPHCYF
Trigger: GAAGTAACAATGAGGCATCCACCTCTTGGTTTTGTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCACCCCCTACTGTACTaGTGGGTGGTGGGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVHPLLY*WVVGGG
Trigger: GCCCCCTCCCACCACCCACCAGTACAGTAGGGGGTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCACAGTTCTAGAGGCTaGGAAGTCCAAGATCAAGGT +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDHSSRG*EVQDQG
Trigger: ACCTTGATCTTGGACTTCCCAGCCTCTAGAACTGTG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCATTAGCCAGGCATGGTaGCAGGTACCTGAAGTCCTA +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIISQAW*QVPEVL
Trigger: TAGGACTTCAGGTACCTGTCACCATGCCTGGCTAAT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACTTGAAGCTGGCATTTaGGAGGCCTTCAGGTTGACA +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSLEAGI*EAFRLT
Trigger: TGTCAACCTGAAGGCCTCTCAAATGCCAGCTTCAAG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTATGCCCAGCACCGAATaGGGCCTTCATAGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCMPSTE*GLHSLG
Trigger: CCCAAGGCTATGAAGGCCTCATTCGGTGCTGGGCAT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTAGGGGCCAGGTGTACTaGAGGAACGGAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCRGQVY*RNGTDG
Trigger: CCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCCCTGTTGCCCAGCATaGCTGGACCCTCAACACTTA +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWPCCPA*LDPQHL
Trigger: TAAGTGTTGAGGGTCCAGGCATGCTGGGCAACAGGG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTCAACCCTTTCTACATaGCTTACCCAGGGTATCTCC +
Preference number: 2 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSTLST*LTQGIS
Trigger: GGAGATACCCTGGGTAAGGCATGTAGAAAGGGTTGA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCTCGGCTTCCCAAAATaGTGGGATTACAGGCACAAG +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILGFPK*WDYRHK
Trigger: CTTGTGCCTGTAATCCCAGCATTTTGGGAAGCCGAG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAAAGAAAAGAACCTCTaGAGAATGAGGGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIKEKNL*RMRGSR
Trigger: CCTGCTTCCCCTCATTCTGCAGAGGTTCTTTTCTTT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGCTTTTGGTAGATACTaGCAGTTTTCCAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDAFGRY*QFSNRV
Trigger: GACCCTGTTGGAAAACTGGCAGTATCTACCAAAAGC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCCACACAAGGCACCGTaGGGACAGAGATGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCPHKAP*GQRCCS
Trigger: AGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAACCTGGATTGCCAGTaGGGAAGGTCTGGAGCACTG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWNLDCQ*GRSGAL
Trigger: CAGTGCTCCAGACCTTCCCCACTGGCAATCCAGGTT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGTACAGCTGCCCAGTaGACATACCTCTCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWCTAAQ*TYLSPQ
Trigger: CTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTCTCACTCCCTTCCTTaGGTTCTGACCTCCACATTA +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSHSLP*VLTSTL
Trigger: TAATGTGGAGGTCAGAACCCAAGGAAGGGAGTGAGA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCACTTTCCCTGGAGGTaGGGGTGCTATCAGCTGCTT +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWHFPWR*GCYQLL
Trigger: AAGCAGCTGATAGCACCCCCACCTCCAGGGAAAGTG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAACATGTGATAAGCTGTaGTTCACAGGCATAAAGAAC +
Preference number: 2 (lower is better)
Translates to: SSVQGGLSASEIRCLLTATCDKL*FTGIKN
Trigger: GTTCTTTATGCCTGTGAACCACAGCTTATCACATGT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGAAATCTCCACCTACTaGGTTCAAGCTATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDEISTY*VQAILL
Trigger: CAGGAGAATAGCTTGAACCCAGTAGGTGGAGATTTC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGAAATCTCCACCTACTaGGTTCAAGCTATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIEISTY*VQAILL
Trigger: CAGGAGAATAGCTTGAACCCAGTAGGTGGAGATTTC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp AGAGAGGGCCTTAGGCACAAAATCCTCCAGACCCGCATCTGCCCCTaGGCTTTCTCAACCCTTCACTCTCCAACTTCTATAAATAACCTG +
Preference number: 2 (lower is better)
Translates to: REGLRHKILQTRICP*AFSTLHSPTSINNL
Trigger: CAGGTTATTTATAGAAGTTGGAGAGTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGGTCTGGAGGATTTTGTGCCTAAGGCCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGCAAGACCAGAAGTCTaGCATCTGCCAAAGCCACAC +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWARPEV*HLPKPH
Trigger: GTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGATGGTGACAGGTACCTaGAGTCCTAGTTACTCAGAA +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGMVTGT*SPSYSE
Trigger: TTCTGAGTAACTAGGACTTCAGGTACCTGTCACCAT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTCCTGCTGCCAGGCCTaGAGTCCCTTAACTCCCCTC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVSCCQA*SPLTPL
Trigger: GAGGGGAGTTAAGGGACTGCAGGCCTGGCAGCAGGA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGGGACAGAGATGCTaGTCTCAGGACTTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWWGQRC*SQDLVQ
Trigger: CTGAACCAAGTCCTGAGAGCAGCATCTCTGTCCCCA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCCATCCTGTACAGCTaGCCAGTGGACATACCTCTC +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSILYS*PVDIPL
Trigger: GAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTCAGTGGGGCAAACTaGCACTGGACACACCCATCA +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLSGAN*HWTHPS
Trigger: TGATGGGTGTGTCCAGTGGCAGTTTGCCCCACTGAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCCCTGGAGGTGGGGGTaGTATCAGCTGCTTAATGGA +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCPWRWG*YQLLNG
Trigger: TCCATTAAGCAGCTGATAGCACCCCCACCTCCAGGG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCTGGGCCAGGCACTTaGCAAACACCTGTAGGTTCA +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSGPGT*QTPVGS
Trigger: TGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCTGACGGCTTGGGGTaGGGCCACAGTGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTADGLG*GHSEPS
Trigger: GCTGGGCTCACTGTGGCCCCACCCCAAGCCGTCAGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCAAAATTAGCCAGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIKISQV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCTGGCTAATTTT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCATTACTTCATGCTGTCTaGGAGCAAAGAGAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSLLHAV*EQREGL
Trigger: AAGGCCCTCTCTTTGCTCCCAGACAGCATGAAGTAA...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGGGCAAACTGCCACTaGACACACCCATCATTCATC +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGANCH*THPSFI
Trigger: GATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTTAATGGAGCATCATaGAAAATGTGGGACTCAAGG +
Preference number: 2 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLNGAS*KMWDSR
Trigger: CCTTGAGTCCCACATTTTCCATGATGCTCCATTAAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTACCTACACTGGTTTTaGACTCCTGGCCTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWYLHWF*TPGLKQ
Trigger: CTGCTTGAGGCCAGGAGTTCAAAACCAGTGTAGGTA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGCGCTCGGCCCATGTTaGCTTTTTGAGATACTTTTT +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIALGPC*LFEILF
Trigger: AAAAAGTATCTCAAAAAGGCAACATGGGCCGAGCGC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGAGAGGGGCTAATATaGAGATACCATTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGEGLI*RYHCCR
Trigger: CCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTCCAGACCCGCATCTaGCCCTTGGCTTTCTCAACC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVLQTRI*PLAFST
Trigger: GGTTGAGAAAGCCAAGGGGCAGATGCGGGTCTGGAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTCATTGTTACTTCATaGTGTCTGGGAGCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLIVTS*CLGAKR
Trigger: TCTCTTTGCTCCCAGACAGCATGAAGTAACAATGAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTTGCCTAGGCTGAAGTaGAGTGGTGCCATCATAGCT +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLPRLK*SGAIIA
Trigger: AGCTATGATGGCACCACTGCACTTCAGCCTAGGCAA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGGGAAAGAGGAGGCTaGAGAGGAGCTCCACAGGTC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVRERGG*RGAPQV
Trigger: GACCTGTGGAGCTCCTCTCCAGCCTCCTCTTTCCCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGCAACCTCCGCATCCTaGGTTCATGGAATTCTCGTG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCATSAS*VHGILV
Trigger: CACGAGAATTCCATGAACCCAGGATGCGGAGGTTGC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTATCTCCCATCATaGCTGGTTACTGTGCTAAAA +
Preference number: 2 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGYLPS*LVTVLK
Trigger: TTTTAGCACAGTAACCAGCCATGATGGGAGATACCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGTGTGGCACTGTTCTaGCTTCAGTCTATCACCAGG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGVALF*LQSITR
Trigger: CCTGGTGATAGACTGAAGCCAGAACAGTGCCACACC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTaGGGTTGTTTCAGGTTTGGGGCTACAGTCAGCGTGTGGTTAGAA +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGH*GCFRFGATVSVWLE
Trigger: TTCTAACCACACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTaGGGTTGGTGGATGGACATTTGGGTTGTTTCAGGTTTGGGGCTA +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGH*GWWMDIWVVSGLGL
Trigger: TAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp CTGCCTTTGACCCCTGCCAAATACAAGCAATCATGGCTGACTCCTTaGCAAACTTTGACCAAATGGCCTCTCTGCTCTTGTTTAGGTGGT +
Preference number: 2 (lower is better)
Translates to: LPLTPAKYKQSWLTP*QTLTKWPLCSCLGG
Trigger: ACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTTGGCAGGGGTCAAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTA +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVRRRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCAGCTCACTGCAACCTCCGCCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTTAGACCAAGGACTCTaGACTCACTTTCCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLDQGL*THFPWR
Trigger: CCTCCAGGGAAAGTGAGTTCAGAGTCCTTGGTCTAA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTAGCCAAGGCATGTCCTaGTGCCAGGCCTGCAGTCCC +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSQGMS*CQACSP
Trigger: GGGACTGCAGGCCTGGCAGCAGGACATGCCTTGGCT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGCCAATTCACACCCTaGTTGAAGCTGGCATTTGAG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGQFTP*LKLAFE
Trigger: CTCAAATGCCAGCTTCAAGCAGGGTGTGAATTGGCC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGGGTCTTGCTTTGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWRVLLC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGGCAACAAAGCAAGACCCT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTGAAGACAGGATCCTaGGCTACTCCAACTCTGAAC +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLKTGS*ATPTLN
Trigger: GTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCCCTGGAGGTGGGGGTaGTATCAGCTGCTTAATGGA +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVPWRWG*YQLLNG
Trigger: TCCATTAAGCAGCTGATAGCACCCCCACCTCCAGGG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGCTTCCCTTCATTTTaGCTGCCCTGCCACTTCCTC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVGFPSF*LPCHFL
Trigger: GAGGAAGTGGCAGGGCAGGCAAAATGAAGGGAAGCC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAAAGTGGGAGCTGGCTaGGGATGCAGGACAAGAACC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVKVGAG*GCRTRT
Trigger: GGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGGGAACCTGGCTGCTaGGAGTGGAAACGCCCTATA +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVREPGC*EWKRPI
Trigger: TATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTACTCCCCTAGGGCAGTaGAGTGAAAAAGCTGTAGCA +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCTPLGQ*SEKAVA
Trigger: TGCTACAGCTTTTTCACTCCACTGCCCTAGGGGAGT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCACAAAACCAAGAGGTaGATGCCTCATTGTTACTTC +
Preference number: 2 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIHKTKR*MPHCYF
Trigger: GAAGTAACAATGAGGCATCCACCTCTTGGTTTTGTG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCTCAGCCTCCCGAGTaGCTGAAATTACAGATGTAC +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSQPPE*LKLQMY
Trigger: GTACATCTGTAATTTCAGCCACTCGGGAGGCTGAGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp CTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTaGTTTCAGGTTTGGGGCTACAGTCAGCGTGTGGTTAGAAACATT +
Preference number: 2 (lower is better)
Translates to: LQLWMDIWVGGWTFG*FQVWGYSQRVVRNI
Trigger: AATGTTTCTAACCACACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCTAGGCTGCCTGTGCTaGAGAGCTGCACCCTTGACC +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLGCLC*RAAPLT
Trigger: GGTCAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTGACCTGCCCAGCATaGGTACCTAACTGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVLTCPA*VPNWGL
Trigger: TAAACCCCAGTTAGGTACCCATGCTGGGCAGGTCAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTCTCACTCCCTTCCTTaGGTTCTGACCTCCACATTA +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCSHSLP*VLTSTL
Trigger: TAATGTGGAGGTCAGAACCCAAGGAAGGGAGTGAGA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTACTCCAACTCTGAACTaGTTCAAGGTGAGAGACGTC +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCTPTLN*FKVRDV
Trigger: GACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCCATTCCAGCGATGGTaGCCCCTCTCAGAGTCAATA +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVPFQRW*PLSESI
Trigger: TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCTTTCCCCACCAAGTaGAGCTCCCCGCAGCTGAAA +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTAFPTK*SSPQLK
Trigger: TTTCAGCTGCGGGGAGCTGCACTTGGTGGGGAAAGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCTCCAGACCCGCATCTaGCCCTTGGCTTTCTCAACC +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLQTRI*PLAFST
Trigger: GGTTGAGAAAGCCAAGGGGCAGATGCGGGTCTGGAG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTCATTGTTACTTCATaGTGTCTGGGAGCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLIVTS*CLGAKR
Trigger: TCTCTTTGCTCCCAGACAGCATGAAGTAACAATGAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAAACCAAGAGGTGGATaGCTCATTGTTACTTCATGC +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWKPRGG*LIVTSC
Trigger: GCATGAAGTAACAATGAGGCATCCACCTCTTGGTTT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTTGCCTAGGCTGAAGTaGAGTGGTGCCATCATAGCT +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVLPRLK*SGAIIA
Trigger: AGCTATGATGGCACCACTGCACTTCAGCCTAGGCAA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGGAGGAAGCTCCTCTaGAGGACATGGATGATAACC +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVRRKLL*RTWMIT
Trigger: GGTTATCATCCATGTCCTCCAGAGGAGCTTCCTCCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGATTAAGGCGAGGGTGTaGCACTGTTCTGGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVIKARV*HCSGFS
Trigger: ACTGAAGCCAGAACAGTGCCACACCCTCGCCTTAAT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCAGGAGTGGAACTGCTaGATCAGTTTATACGTATGT +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWQEWNC*ISLYVC
Trigger: ACATACGTATAAACTGATCCAGCAGTTCCACTCCTG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTACTCACTGTCCACGTaGAGAAGCAAGACCAGAAGT +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVYSLST*RSKTRS
Trigger: ACTTCTGGTCTTGCTTCTCCACGTGGACAGTGAGTA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTGGGCAGGAGAGAGATaGGAGAAGCAGTGGCCACTT +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTWAGER*EKQWPL
Trigger: AAGTGGCCACTGCTTCTCCCATCTCTCTCCTGCCCA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTTAATGGAGCATCATaGAAAATGTGGGACTCAAGG +
Preference number: 2 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLNGAS*KMWDSR
Trigger: CCTTGAGTCCCACATTTTCCATGATGCTCCATTAAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp ACCCCTGCCAAATACAAGCAATCATGGCTGACTCCTTTGCAAACTTaGACCAAATGGCCTCTCTGCTCTTGTTTAGGTGGTTTTTATTTC +
Preference number: 2 (lower is better)
Translates to: TPAKYKQSWLTPLQT*TKWPLCSCLGGFYF
Trigger: GAAATAAAAACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTTGGCAGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGGGAGAAAGAAGCAGTaGCAGCTCTTGGGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTGRKKQ*QLLGFE
Trigger: CTCAAAGCCCAAGAGCTGTCACTGCTTCTTTCTCCC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTTAATGCCATTGCTTTaGGGGTTAGGATTCAACATA +
Preference number: 2 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLMPLL*GLGFNI
Trigger: TATGTTGAATCCTAACCCCCAAAGCAATGGCATTAA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCCAAGTCACGGCTTTaGGCGGCATCATTTGAAAAG +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTAKSRL*AASFEK
Trigger: CTTTTCAAATGATGCCGCTCAAAGCCGTGACTTGGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTACATGCTACGGAGTTTaGATCTTGCCTAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTTCYGV*ILPSTG
Trigger: CCCTGTGCTAGGCAAGATTCAAACTCCGTAGCATGT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCATCATTTGAAAAGTaGTGGGATCAGCCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTASFEK*WDQPGA
Trigger: TGCGCCTGGCTGATCCCAGCACTTTTCAAATGATGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCTGAAGACAGGATCCTaGGCTACTCCAACTCTGAAC +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLKTGS*ATPTLN
Trigger: GTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGGGGGTGCTATCAGCTaGTTAATGGAGCATCATGGA +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTGGAIS*LMEHHG
Trigger: TCCATGATGCTCCATTAAGCAGCTGATAGCACCCCC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTTGGTCTCCCAAAGTaGTGGGATTATAGGTATGAT +
Preference number: 2 (lower is better)
Translates to: INWKIASDCEEISDSDGVLGLPK*WDYRYD
Trigger: ATCATACCTATAATCCCAGCACTTTGGGAGACCAAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp AGTAATTCTTTCACCAATTACCAGTTTATCTCTTCTCCAATTCCTTaGGATACGCCTCCTGCAAGAAGCCGATTTCCAGCTGTATGTGAT +
Preference number: 2 (lower is better)
Translates to: SNSFTNYQFISSPIP*DTPPARSRFPAVCD
Trigger: ATCACATACAGCTGGAAATCGGCTTCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAGAGATAAACTGGTAATTGGTGAAAGAATTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCTGGACTTGGAGCATaGGATGAAGAGATGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTAGLGA*DEEMFR
Trigger: TCTGAACATCTCTTCATCCCATGCTCCAAGTCCAGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp CTGGACCCTCAACACTTAATAGTGATAATAACATATATCCAACCCTaGGTAAATGCCAGGACTCATCCTAAGACCTACATCGATAAACTC +
Preference number: 2 (lower is better)
Translates to: LDPQHLIVIITYIQP*VNARTHPKTYIDKL
Trigger: GAGTTTATCGATGTAGGTCTTAGGATGAGTCCTGGCATTTACCAAGGGTTGGATATATGTTATTATCACTATTAAGTGTTGAGGGTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTACGGAGTTTGAATCTTaGCTAGCACAGGGATTTCTG +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTTEFES*LAQGFL
Trigger: CAGAAATCCCTGTGCTAGGCAAGATTCAAACTCCGT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCAATTTCAACACAGATaGATTAGACCAAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTQFQHR*IRPRTL
Trigger: CAGAGTCCTTGGTCTAATGCATCTGTGTTGAAATTG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 90 bp CCCATGAGAGTTTCATTTCCTCCATATTTTCATCAGCATTTCATCTaGTCAGATTTACTCTCTATAGGTTCTAAGTATTATTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: PMRVSFPPYFHQHFI*SDLLSIGSKYYSPS
Trigger: AGAGGGGGAATAATACTTAGAACCTATAGAGAGTAAATCTGACAAGATGAAATGCTGATGAAAATATGGAGGAAATGAAACTCTCATGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp GGGAGGGGGCCCAGTGGGGCAGGAACTCAAGGCAGTTaGGCTCCTGGAGAGCAGCCACCCTGCCGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: GRGPSGAGTQGS*APGEQPPCRSC
Trigger: GCAGGAGCGGCAGGGTGGCTGCTCTCCAGGAGCCCAACTGCCTTGAGTTCCTGCCCCACTGGGCCCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GGGCTCCTGGAGAGCAGCCACCCTGCCGCTCCTGCCTaGCTCAATGCAACGGTCTCAGGCTGGGCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: GLLESSHPAAPA*LNATVSGWAAR
Trigger: CCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCCAGGAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GGAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATaGAACGGTCTCAGGCTGGGCTGCCAGGATGGGAGG +
Preference number: 3 (lower is better)
Translates to: GEQPPCRSCLPQ*NGLRLGCQDGR
Trigger: CCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp AGTTGGGCTCCTGGAGAGCAGCCACCCTGCCGCTCCTaGCTGCCTCAATGCAACGGTCTCAGGCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: SWAPGEQPPCRS*LPQCNGLRLGC
Trigger: GCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCCAGGAGCCCAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp TCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCTaGCAGGATGGGAGGCAGGTCTTGTGGAGTCGCCCA +
Preference number: 3 (lower is better)
Translates to: SCLPQCNGLRLG*QDGRQVLWSRP
Trigger: TGGGCGACTCCACAAGACCTGCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp TCCCCAAGGATGGGTGGCCAGGTCCCCCACTGGGAGTaGAGGTCTCACTCCCTTCCTTGGGTTCTGACCTCC +
Preference number: 3 (lower is better)
Translates to: SPRMGGQVPHWE*RSHSLPWVLTS
Trigger: GGAGGTCAGAACCCAAGGAAGGGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCCACCCATCCTTGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CTCAGGTCCCCAAGGATGGGTGGCCAGGTCCCCCACTaGGAGTGGAGGTCTCACTCCCTTCCTTGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: LRSPRMGGQVPH*EWRSHSLPWVL
Trigger: CAGAACCCAAGGAAGGGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCCACCCATCCTTGGGGACCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTGGTGAGAGGCAGGTaGGGACGCAGGCCTAGGCTG +
Preference number: 3 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALVRGR*GRRPRL
Trigger: CAGCCTAGGCCTGCGTCCCAACCTGCCTCTCACCAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGAACGTCCCCAACCACTaGAAGGCACTCATAGTGTCT +
Preference number: 3 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPNVPNH*KALIVS
Trigger: AGACACTATGAGTGCCTTCAAGTGGTTGGGGACGTT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp GCCTGGCTTTCCCCACCAAGTGCAGCTCCCCGCAGCTaGAAGCCACACTCTCAACACAGGACTCCTGAGATC +
Preference number: 3 (lower is better)
Translates to: AWLSPPSAAPRS*KPHSQHRTPEI
Trigger: GATCTCAGGAGTCCTGTGTTGAGAGTGTGGCTTTCAGCTGCGGGGAGCTGCACTTGGTGGGGAAAGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GAAGCTCCTCTGGAGGACATGGATGATAACCTGGATTaGCAGTGGGGAAGGTCTGGAGCACTGGGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: EAPLEDMDDNLD*QWGRSGALGAA
Trigger: GGCTGCCCCCAGTGCTCCAGACCTTCCCCACTGGCAATCCAGGTTATCATCCATGTCCTCCAGAGGAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GGCAGGTCTTGTGGAGTCGCCCACACACCACATACCTaGCCTGAGGCCTTCAGGGACCAATGCAACAGGAGA +
Preference number: 3 (lower is better)
Translates to: GRSCGVAHTPHT*PEAFRDQCNRR
Trigger: TCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTGGGCGACTCCACAAGACCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp CCAACAGTGGGTGAGCTTGGGGTGAGGGAACCTGGCTaGTGGGAGTGGAAACGCCCTATATCCTCCATCCTG +
Preference number: 3 (lower is better)
Translates to: PTVGELGVREPG*WEWKRPISSIL
Trigger: CAGGATGGAGGATATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCACCCCAAGCTCACCCACTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp AGGTGCCAGCAGATCCAGTGTCCAGGGCGGGCTCTCTaGTTCAGAGATACGGTGCCTTCTCACTGCATCCAC +
Preference number: 3 (lower is better)
Translates to: RCQQIQCPGRAL*FRDTVPSHCIH
Trigger: GTGGATGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGATCTGCTGGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp TACAGGTCCTGGAGGGTGAGGAAAGTGGGAGCTGGCTaGGGATGCAGGACAAGAACCCAGGGCTTCCCTTCA +
Preference number: 3 (lower is better)
Translates to: YRSWRVRKVGAG*GCRTRTQGFPS
Trigger: TGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCCTCACCCTCCAGGACCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp GTGGTGCGATCTCAGCTCACTACAACCTCCGCCTCCTaGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCC +
Preference number: 3 (lower is better)
Translates to: VVRSQLTTTSAS*RAQVTYLPTSA
Trigger: GGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAGGCGGAGGTTGTAGTGAGCTGAGATCGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGATGGGAGGCAGGTCTaGTGGAGTCGCCCACACACC +
Preference number: 3 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDDGRQV*WSRPHT
Trigger: GGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGATAGAGATCATTAGGTaGCTGAACTCCCCTAGGGCA +
Preference number: 3 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPIEIIR*LNSPRA
Trigger: TGCCCTAGGGGAGTTCAGCAACCTAATGATCTCTAT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTGTATCCCAGCACTTaGGGAAGCCAACGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALYPST*GSQRRW
Trigger: CCACCTGCGTTGGCTTCCCAAAGTGCTGGGATACAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAGCAGGTGGCAGATGTaGGCACACTGGGCAGAGATG +
Preference number: 3 (lower is better)
Translates to: GKWELAADAGQEPRASLHSRWQM*AHWAEM
Trigger: CATCTCTGCCCAGTGTGCCAACATCTGCCACCTGCT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGATGGGAGGCAGGTCTaGTGGAGTCGCCCACACACC +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQDGRQV*WSRPHT
Trigger: GGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAGAAGCAGTGGCCACTaGCTCTGGGCCAGGCACTTG +
Preference number: 3 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIRSSGH*LWARHL
Trigger: CAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCAGAAGCAGTGGCCACTaGCTCTGGGCCAGGCACTTG +
Preference number: 3 (lower is better)
Translates to: GVETPYILHPVQLPSGHTRSSGH*LWARHL
Trigger: CAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGTTCCAGGGTGCAGGTaGCTGGACTTGGAGCATGGG +
Preference number: 3 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDVPGCR*LDLEHG
Trigger: CCCATGCTCCAAGTCCAGCAACCTGCACCCTGGAAC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGAAGCTATTAATAGTTaGAGGCCAGGCAGGGTAAAG +
Preference number: 3 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPEAINS*RPGRVK
Trigger: CTTTACCCTGCCTGGCCTCAAACTATTAATAGCTTC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGAGTTTTCCCTCGCATaGTCCCCTGGGTCCTTCATC +
Preference number: 3 (lower is better)
Translates to: GKWELAADAGQEPRASLHEFSLA*SPGSFI
Trigger: GATGAAGGACCCAGGGGACAATGCGAGGGAAAACTC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp GTCTTGTGGAGTCGCCCACACACCACATACCTGCCCTaGGGCCTTCAGGGACCAATGCAACAGGAGAGGCAT +
Preference number: 3 (lower is better)
Translates to: VLWSRPHTTYLP*GLQGPMQQERH
Trigger: ATGCCTCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTGGGCGACTCCACAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GTCCACGTGGAGAAGCAAGACCAGAAGTCTGACATCTaGCAAAGCCACACAGCCCCGGAAGTGAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VHVEKQDQKSDI*QSHTAPEVREL
Trigger: CAGCTCCCTCACTTCCGGGGCTGTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGCTTCTCCACGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GGGCCTAGTGGAAGCCCCTGCCTCAGTGGGGCAAACTaGCACTGGACACACCCATCATTCATCATCACCTCT +
Preference number: 3 (lower is better)
Translates to: GPSGSPCLSGAN*HWTHPSFIITS
Trigger: AGAGGTGATGATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCCACTGAGGCAGGGGCTTCCACTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp CAGCAATCGGACCCAGAACAGTCTGAACTTAGTGGCTaGCAGCTTCTTCCCAATCCCCAGCCACCACACCCC +
Preference number: 3 (lower is better)
Translates to: QQSDPEQSELSG*QLLPNPQPPHP
Trigger: GGGGTGTGGTGGCTGGGGATTGGGAAGAAGCTGGCAGCCACTAAGTTCAGACTGTTCTGGGTCCGATTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp ACAGTGGGTGAGCTTGGGGTGAGGGAACCTGGCTGCTaGGAGTGGAAACGCCCTATATCCTCCATCCTGTAC +
Preference number: 3 (lower is better)
Translates to: TVGELGVREPGC*EWKRPISSILY
Trigger: GTACAGGATGGAGGATATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCACCCCAAGCTCACCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTaGGAATGGCACCTGGGGATGGGGGAGGCAGGACGG +
Preference number: 3 (lower is better)
Translates to: RLIARKSVIQMV*EWHLGMGEAGR
Trigger: CCGTCCTGCCTCCCCCATCCCCAGGTGCCATTCCCACACCATCTGAATCACTGATTTCCTCGCAATCAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTGCAGGTTGCTGGACTaGGAGCATGGGATGAAGAGA +
Preference number: 3 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWCRLLD*EHGMKR
Trigger: TCTCTTCATCCCATGCTCCAAGTCCAGCAACCTGCA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGTTCCAGGGTGCAGGTaGCTGGACTTGGAGCATGGG +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQVPGCR*LDLEHG
Trigger: CCCATGCTCCAAGTCCAGCAACCTGCACCCTGGAAC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAACCCGCATCTGCCCCTaGGCTTTCTCAACCCTTCAC +
Preference number: 3 (lower is better)
Translates to: GSTVCPPFQRWWPLSESITRICP*AFSTLH
Trigger: GTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGGT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp AGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTaGCTTCTCACTGCATCCACACATGGTAGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: SVQGGLSASEIR*LLTASTHGRRD
Trigger: GTCCCTTCTACCATGTGTGGATGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp GGGATTAATACAGACAGCTCGGGTAGGGTCCACTCCTaGTTCCAGGGTGCAGGTTGCTGGACTTGGAGCATG +
Preference number: 3 (lower is better)
Translates to: GINTDSSGRVHS*FQGAGCWTWSM
Trigger: CATGCTCCAAGTCCAGCAACCTGCACCCTGGAACCAGGAGTGGACCCTACCCGAGCTGTCTGTATTAATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp AGTGGAAGCCCCTGCCTCAGTGGGGCAAACTGCCACTaGACACACCCATCATTCATCATCACCTCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: SGSPCLSGANCH*THPSFIITSLG
Trigger: TCCCAGAGAGGTGATGATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCCACTGAGGCAGGGGCTTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAGTCCCTGCCTGCCTTaGACCCCTGCCAAATACAAG +
Preference number: 3 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDSPCLP*TPAKYK
Trigger: CTTGTATTTGGCAGGGGTCAAAGGCAGGCAGGGACT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp ACTCACTGTCCACGTGGAGAAGCAAGACCAGAAGTCTaGCATCTGCCAAAGCCACACAGCCCCGGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: THCPRGEARPEV*HLPKPHSPGSE
Trigger: CTCACTTCCGGGGCTGTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGCTTCTCCACGTGGACAGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp ACACCACATACCTGCCCTGAGGCCTTCAGGGACCAATaGAACAGGAGAGGCATTCCCAAGCACCACATGTTC +
Preference number: 3 (lower is better)
Translates to: TPHTCPEAFRDQ*NRRGIPKHHMF
Trigger: GAACATGTGGTGCTTGGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp GTGGCACGATCTCGGCTCACTGAAATCTCCACCTACTaGGTTCAAGCTATTCTCCTGTCTCAGCCTCCCGAG +
Preference number: 3 (lower is better)
Translates to: VARSRLTEISTY*VQAILLSQPPE
Trigger: CTCGGGAGGCTGAGACAGGAGAATAGCTTGAACCCAGTAGGTGGAGATTTCAGTGAGCCGAGATCGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CTGGACAATGGCCAGGCCACATATGACAATAGACTCTaGCCAGAAACCCATGACCAGCCTGGGAAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: LDNGQATYDNRL*PETHDQPGKPR
Trigger: CCTTGGCTTCCCAGGCTGGTCATGGGTTTCTGGCCAGAGTCTATTGTCATATGTGGCCTGGCCATTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp GGAGGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTaGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: GGSTVCPPFQRW*PLSESIPFLPR
Trigger: TCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTGCTGCTCTCAGGACTaGGTTCAGCCAAGGCATGTC +
Preference number: 3 (lower is better)
Translates to: FESCLAQGFLPAGRALSGCCSQD*VQPRHV
Trigger: GACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGCA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGCTGCTCTCAGGACTaGGTTCAGCCAAGGCATGTC +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQCCSQD*VQPRHV
Trigger: GACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGCA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTGGTGAGAGGCAGGTaGGGACGCAGGCCTAGGCTG +
Preference number: 3 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLVRGR*GRRPRL
Trigger: CAGCCTAGGCCTGCGTCCCAACCTGCCTCTCACCAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTCTAGTTCTTGTCCCTaGCAGAGCTCAGAAATGGAG +
Preference number: 3 (lower is better)
Translates to: GKWELAADAGQEPRASLHSSSCP*QSSEME
Trigger: CTCCATTTCTGAGCTCTGCAAGGGACAAGAACTAGA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAATATGCAGATACCATaGCTGCAGGTGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDNMQIP*LQVALP
Trigger: GGGCAGAGCCACCTGCAGCAATGGTATCTGCATATT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCACCTCCAAAGAGCTaGACAACAGAGGAACCCGCT +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQAPPKS*TTEEPA
Trigger: AGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACACCTCTTAATGCCATaGCTTTGGGGGTTAGGATTC +
Preference number: 3 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAHLLMP*LWGLGF
Trigger: GAATCCTAACCCCCAAAGCAATGGCATTAAGAGGTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp CTAGGGGACTGGGAAGGTCCCTCAACCCTTTCTACATaGCTTACCCAGGGTATCTCCCATCATGGCTGGTTA +
Preference number: 3 (lower is better)
Translates to: LGDWEGPSTLST*LTQGISHHGWL
Trigger: TAACCAGCCATGATGGGAGATACCCTGGGTAAGGCATGTAGAAAGGGTTGAGGGACCTTCCCAGTCCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CTGAAGACAGGATCCTGCGCTACTCCAACTCTGAACTaGTTCAAGGTGAGAGACGTCATCCACAGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: LKTGSCATPTLN*FKVRDVIHRGH
Trigger: GTGGCCTCTGTGGATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp GGAGGATCGCTTAAGCCCGGGAGTTTAAGGATACAGTaGGTTATGATTGCACCACTTCGCTCCAGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: GGSLKPGSLRIQ*VMIAPLRSRLG
Trigger: ACCCAGCCTGGAGCGAAGTGGTGCAATCATAACTCACTGTATCCTTAAACTCCCGGGCTTAAGCGATCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp CCTAAGAGATGGGAGCAGGAGACATGCTACGGAGTTTaGATCTTGCCTAGCACAGGGATTTCTGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PKRWEQETCYGV*ILPSTGISACW
Trigger: CCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTCCGTAGCATGTCTCCTGCTCCCATCTCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp GAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTaGCCAGTGGACATACCTCTCTCCCCAGCAATTTCT +
Preference number: 3 (lower is better)
Translates to: EWKRPISSILYS*PVDIPLSPAIS
Trigger: AGAAATTGCTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp AACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTaGACATACCTCTCTCCCCAGCAATTTCTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: NALYPPSCTAAQ*TYLSPQQFLKA
Trigger: TGCCTTGAGAAATTGCTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp ATGGCTCTAGTTCTTGTCCCTTGCAGAGCTCAGAAATaGAGGTGGCTCCTGTGCCTTGTCCAGCAATGGTTC +
Preference number: 3 (lower is better)
Translates to: MALVLVPCRAQK*RWLLCLVQQWF
Trigger: GAACCATTGCTGGACAAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCAAGGGACAAGAACTAGAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTCTGGGCCAGGCACTaGGCAAACACCTGTAGGTTC +
Preference number: 3 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLWARH*ANTCRF
Trigger: GAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATACATATATCCAACCCTaGGTAAATGCCAGGACTCAT +
Preference number: 3 (lower is better)
Translates to: GKWELAADAGQEPRASLHTYIQP*VNARTH
Trigger: ATGAGTCCTGGCATTTACCAAGGGTTGGATATATGT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAAAAAGTGGTGGGGTTaGGGTGCAGTGTCTCACATC +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQKKWWG*GAVSHI
Trigger: GATGTGAGACACTGCACCCAAACCCCACCACTTTTT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAACGTCCCCAACCACTaGAAGGCACTCATAGTGTCT +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQNVPNH*KALIVS
Trigger: AGACACTATGAGTGCCTTCAAGTGGTTGGGGACGTT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCAGACAGATAAATCCCTaGCCCAAGGTCACAGAGCTG +
Preference number: 3 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIRQINP*PKVTEL
Trigger: CAGCTCTGTGACCTTGGGCAAGGGATTTATCTGTCT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTACCCGCATCTGCCCCTaGGCTTTCTCAACCCTTCAC +
Preference number: 3 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCTRICP*AFSTLH
Trigger: GTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGGT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGAGGTGGATGCCTCATaGTTACTTCATGCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIEVDAS*LLHAVW
Trigger: CCAGACAGCATGAAGTAACAATGAGGCATCCACCTC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTTACCTACACTGGTTTaGAACTCCTGGCCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLPTLV*NSWPQA
Trigger: TGCTTGAGGCCAGGAGTTCAAAACCAGTGTAGGTAA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp CACTGGCCAATTCACACCCTGCTTGAAGCTGGCATTTaGGAGGCCTTCAGGTTGACAACAGCAGCAACAAGT +
Preference number: 3 (lower is better)
Translates to: HWPIHTLLEAGI*EAFRLTTAATS
Trigger: ACTTGTTGCTGCTGTTGTCAACCTGAAGGCCTCTCAAATGCCAGCTTCAAGCAGGGTGTGAATTGGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp AACAAACTGACAATACTCGTGAAATCAACACCCAGATaGGGTAGACCAGCACTCCAGGATGCCCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: NKLTILVKSTPR*GRPALQDAPPQ
Trigger: CTGGGGAGGGGCATCCTGGAGTGCTGGTCTACCTCATCTGGGTGTTGATTTCACGAGTATTGTCAGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTAACATTCTACCACTaGGGCAACAGTCTTCGGGGC +
Preference number: 3 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLTFYH*GNSLRG
Trigger: GCCCCGAAGACTGTTGCCCAAGTGGTAGAATGTTAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAATATGCAGATACCATaGCTGCAGGTGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWNMQIP*LQVALP
Trigger: GGGCAGAGCCACCTGCAGCAATGGTATCTGCATATT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGACAGCTCTTGGGCTTaGAGGGAAATGATTCAGCGG +
Preference number: 3 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWDSSWA*REMIQR
Trigger: CCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTGTC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACAACCTCCCTCATATTaGACTAAGAAGTCTCATAAA +
Preference number: 3 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAQPPSY*TKKSHK
Trigger: TTTATGAGACTTCTTAGTCAAATATGAGGGAGGTTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGCACCTCCAAAGAGCTaGACAACAGAGGAACCCGCT +
Preference number: 3 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCAPPKS*TTEEPA
Trigger: AGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTGC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGAGTTTTCCCTCGCATaGTCCCCTGGGTCCTTCATC +
Preference number: 3 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCEFSLA*SPGSFI
Trigger: GATGAAGGACCCAGGGGACAATGCGAGGGAAAACTC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp CCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTaGACATACAACTGGACAATGGCCAGGCCACATATG +
Preference number: 3 (lower is better)
Translates to: PLSESIPFLPRD*TYNWTMARPHM
Trigger: CATATGTGGCCTGGCCATTGTCCAGTTGTATGTTCAGTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp GGCTTTGAGGGAAATGATTCAGCGGGAGAAAGAAGGTaGAGAGGGGCTAATATGCAGATACCATTGCTGCAG +
Preference number: 3 (lower is better)
Translates to: GFEGNDSAGERR*RGANMQIPLLQ
Trigger: CTGCAGCAATGGTATCTGCATATTAGCCCCTCTCCACCTTCTTTCTCCCGCTGAATCATTTCCCTCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CATTCTTGCCAATGTCTCGGTGGACATAGCTTTCTGTaGTGTACATACCCAGGAGTGGAACTGCTGGATCAG +
Preference number: 3 (lower is better)
Translates to: HSCQCLGGHSFL*CTYPGVELLDQ
Trigger: CTGATCCAGCAGTTCCACTCCTGGGTATGTACACCACAGAAAGCTATGTCCACCGAGACATTGGCAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp ACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTaGGTTGTTTCAGGTTTGGGGCTACAGTCAGCGTGT +
Preference number: 3 (lower is better)
Translates to: TVDGHLGWWMDI*VVSGLGLQSAC
Trigger: ACACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp CCTGTAGGTTCAATCTCAGAAGAACCCAGTGAAGAATaGGCCAGATACTCACTGTCCACGTGGAGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: PVGSISEEPSEE*ARYSLSTWRSK
Trigger: CTTGCTTCTCCACGTGGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTCTTCTGAGATTGAACCTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp GCAAACACCTGTAGGTTCAATCTCAGAAGAACCCAGTaGAGAATGAGCCAGATACTCACTGTCCACGTGGAG +
Preference number: 3 (lower is better)
Translates to: ANTCRFNLRRTQ*RMSQILTVHVE
Trigger: CTCCACGTGGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTCTTCTGAGATTGAACCTACAGGTGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CATTCTTCCCAGGGAGAAAGAAGCAGTGACAGCTCTTaGGCTTTGAGGGAAATGATTCAGCGGGAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: HSSQGERSSDSS*ALREMIQREKE
Trigger: TTCTTTCTCCCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTGTCACTGCTTCTTTCTCCCTGGGAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCAAGATGGCCATGAATaGATAATTACTGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQQDGHE*IITEVG
Trigger: CCCAACTTCAGTAATTATCAATTCATGGCCATCTTG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCAACCTCCCTCATATTaGACTAAGAAGTCTCATAAA +
Preference number: 3 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQQPPSY*TKKSHK
Trigger: TTTATGAGACTTCTTAGTCAAATATGAGGGAGGTTG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp GCAGATGTTGGCACACTGGGCAGAGATGTGTTGGTGTaGAAAACCTCTATGTACTTTAAAGACAGGGTCTCC +
Preference number: 3 (lower is better)
Translates to: ADVGTLGRDVLV*KTSMYFKDRVS
Trigger: GGAGACCCTGTCTTTAAAGTACATAGAGGTTTTTCACACCAACACATCTCTGCCCAGTGTGCCAACATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp CAGATAAACACTTGTCCCTTTGCCACCCCTAATGCCTaGCCCCACTTCATATTCCAGGAACACTCCATTAAA +
Preference number: 3 (lower is better)
Translates to: QINTCPFATPNA*PHFIFQEHSIK
Trigger: TTTAATGGAGTGTTCCTGGAATATGAAGTGGGGGCAGGCATTAGGGGTGGCAAAGGGACAAGTGTTTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp AGATACTGCCAGTTTTCCAACAGGGTCACACCAGCTTaGTCCATTCAGGTTACAATGAAACACCTTAGCCTG +
Preference number: 3 (lower is better)
Translates to: RYCQFSNRVTPA*SIQVTMKHLSL
Trigger: CAGGCTAAGGTGTTTCATTGTAACCTGAATGGACCAAGCTGGTGTGACCCTGTTGGAAAACTGGCAGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp TGGGTTGGTGGATGGACATTTGGGTTGTTTCAGGTTTaGGGCTACAGTCAGCGTGTGGTTAGAAACATTCTT +
Preference number: 3 (lower is better)
Translates to: WVGGWTFGLFQV*GYSQRVVRNIL
Trigger: AAGAATGTTTCTAACCACACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp TTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTaGTGGATGGACATTTGGGTTGTTTCAGGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: FTVASTVDGHLG*WMDIWVVSGLG
Trigger: CCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGACATATATCCAACCCTaGGTAAATGCCAGGACTCAT +
Preference number: 3 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWTYIQP*VNARTH
Trigger: ATGAGTCCTGGCATTTACCAAGGGTTGGATATATGT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGAGGTGGATGCCTCATaGTTACTTCATGCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: INWKIASDCEEISDSDGVEVDAS*LLHAVW
Trigger: CCAGACAGCATGAAGTAACAATGAGGCATCCACCTC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGATGGACATTTGGGTaGTTTCAGGTTTGGGGCTAC +
Preference number: 3 (lower is better)
Translates to: INWKIASDCEEISDSDGVGWTFG*FQVWGY
Trigger: GTAGCCCCAAACCTGAAACAACCCAAATGTCCATCC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp CAGGCACAAGCCACCACATCCAACCTCCCTCATATTTaGCTAAGAAGTCTCATAAATCTGAGAACACCTAGC +
Preference number: 3 (lower is better)
Translates to: QAQATTSNLPHI*LRSLINLRTPS
Trigger: GCTAGGTGTTCTCAGATTTATGAGACTTCTTAGTCAAATATGAGGGAGGTTGGATGTGGTGGCTTGTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp ATCAGTTTATACGTATGTTCGGCTTTTGGTAGATACTaGCAGTTTTCCAACAGGGTCACACCAGCTTGGTCC +
Preference number: 3 (lower is better)
Translates to: ISLYVCSAFGRY*QFSNRVTPAWS
Trigger: GGACCAAGCTGGTGTGACCCTGTTGGAAAACTGGCAGTATCTACCAAAAGCCGAACATACGTATAAACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp TCACCAATTACCAGTTTATCTCTTCTCCAATTCCTTTaGATACGCCTCCTGCAAGAAGCCGATTTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: SPITSLSLLQFL*IRLLQEADFQL
Trigger: CAGCTGGAAATCGGCTTCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAGAGATAAACTGGTAATTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTTTGAGCGGCATCATTaGAAAAGTGCTGGGATCAGC +
Preference number: 3 (lower is better)
Translates to: INWKIASDCEEISDSDGVFERHH*KSAGIS
Trigger: GCTGATCCCAGCACTTTTCAAATGATGCCGCTCAAA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp ACAAGCGAAGTGATTAACTGGAAGATAGCGTCTGATTaGGAGGAAATCAGTGATTCAGATGGTGTGGGAATG +
Preference number: 3 (lower is better)
Translates to: TSEVINWKIASD*EEISDSDGVGM
Trigger: CATTCCCACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAATCACTTCGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp AACTTTGACCAAATGGCCTCTCTGCTCTTGTTTAGGTaGTTTTTATTTCCACATCTCCAACAGGGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: NFDQMASLLLFR*FLFPHLQQGVW
Trigger: CCAGACTCCCTGTTGGAGATGTGGAAATAAAAACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGACAGCTCTTGGGCTTaGAGGGAAATGATTCAGCGG +
Preference number: 3 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTDSSWA*REMIQR
Trigger: CCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTGTC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTCATCCCTCCTAATCTaGCAAACCAGCTGTCAATTG +
Preference number: 3 (lower is better)
Translates to: INWKIASDCEEISDSDGVSSLLI*QTSCQL
Trigger: CAATTGACAGCTGGTTTGCAAGATTAGGAGGGATGA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTAGACAGATAAATCCCTaGCCCAAGGTCACAGAGCTG +
Preference number: 3 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTRQINP*PKVTEL
Trigger: CAGCTCTGTGACCTTGGGCAAGGGATTTATCTGTCT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp GAGGACTCTGACCTCTTTTGCTTGACCTCATGTCTGTaGAATTTATCCATGTTGCTGTGCATAGCGATATTT +
Preference number: 3 (lower is better)
Translates to: EDSDLFCLTSCL*NLSMLLCIAIF
Trigger: AAATATCGCTATGCACAGCAACATGGATAAATTTCACAGACATGAGGTCAAGCAAAAGAGGTCAGAGTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp TCTCTCTTGATGATGAGGACTCTGACCTCTTTTGCTTaGCCTCATGTCTGTGAAATTTATCCATGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: SLLMMRTLTSFA*PHVCEIYPCCC
Trigger: ACAGCAACATGGATAAATTTCACAGACATGAGGTCAAGCAAAAGAGGTCAGAGTCCTCATCATCAAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CCA 72 bp CAATCATGGCTGACTCCTTTGCAAACTTTGACCAAATaGCCTCTCTGCTCTTGTTTAGGTGGTTTTTATTTC +
Preference number: 3 (lower is better)
Translates to: QSWLTPLQTLTK*PLCSCLGGFYF
Trigger: GAAATAAAAACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGAGTCAGCCATGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTATAGAGATCATTAGGTaGCTGAACTCCCCTAGGGCA +
Preference number: 3 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTIEIIR*LNSPRA
Trigger: TGCCCTAGGGGAGTTCAGCAACCTAATGATCTCTAT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGTACCTGTGCATAAATaGTTAACTGACCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTVPVHK*LTDLPS
Trigger: GCTGGGCAGGTCAGTTAACAATTTATGCACAGGTAC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCACTTCAGTAAAAAGTaGTGGTTTTGGCTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: INWKIASDCEEISDSDGVHFSKK*WFWLVF
Trigger: AAAAACCAGCCAAAACCACAACTTTTTACTGAAGTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR TCA 72 bp TTAATGCCATTGCTTTGGGGGTTAGGATTCAACATATaGATTCAAAGGGTACACCTACATTCACAACACAGC +
Preference number: 3 (lower is better)
Translates to: LMPLLWGLGFNI*IQRVHLHSQHS
Trigger: GCTGTGTTGTGAATGTAGGTGTACCCTTTGAATTCATATGTTGAATCCTAACCCCCAAAGCAATGGCATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR GCA 72 bp TATTATTCTGTGTCACTGAGGCCTATCACAGTGCTCTaGACATGTAGGTGCAAATATCTGTTGTATGATTAC +
Preference number: 3 (lower is better)
Translates to: YYSVSLRPITVL*TCRCKYLLYDY
Trigger: GTAATCATACAACAGATATTTGCACCTACATGTGCAGAGCACTGTGATAGGCCTCAGTGACACAGAATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCAAGATGGCCATGAATaGATAATTACTGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTQDGHE*IITEVG
Trigger: CCCAACTTCAGTAATTATCAATTCATGGCCATCTTG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCTAGCCAGGCTGAGCTaGCTCCAGTGGCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWLARLS*LQWRRR
Trigger: CCGCCGGCGCCACTGGAGGCAGCTCAGCCTGGCTAG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGGAGAGCAGCCACCCTaGCGCTCCTGCCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPGEQPP*RSCLPQ
Trigger: TTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGCAAGCGGCTTGCCCTaGGGGTGGAACGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTASGLP*GWNGPG
Trigger: CCCTGGCCCGTTCCACCCCCAGGGCAAGCCGCTTGC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCTTCCGGTCGGCTTGTaGCCTGGGGCCGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTLPVGL*PGAAIR
Trigger: CCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGGCCAGGTCCCCCACTaGGAGTGGAGGTCTCACTCC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWGQVPH*EWRSHS
Trigger: GGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCAGCCGGGCCGCCGCTaGAGGGTATTGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWQPGRR*RVLKRC
Trigger: GCATCTCTTCAATACCCTTCAGCGGCGGCCCGGCTG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCAGAGGGCTGAGGGCTaGCAGGTCAGAGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPQRAEG*QVRGGL
Trigger: GAGTCCTCCTCTGACCTGGCAGCCCTCAGCCCTCTG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCCACCCTGCCGCTCCTaGCTGCCTCAATGCAACGGT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWPPCRS*LPQCNG
Trigger: ACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCCTCTGCCTGAGCTCTaGCCACCAGGTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWPLPEL*PPGVSS
Trigger: GGAGGAGACACCTGGTGGGCAGAGCTCAGGCAGAGG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGGCCTAGGCTGCCTGTaGTGCAGAGCTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPGLGCL*CRAAPL
Trigger: CAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAGGCC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTGGCTCCAGTGGGTCTaGGGGACGGTCCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTWLQWV*GTVRGP
Trigger: GGGACCTCGGACCGTCCCCCAGACCCACTGGAGCCA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416600.6
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGAACGGGCTGTCTACCTaGGATGCCAGCACGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWNGLST*DASTPG
Trigger: GCCTGGCGTGCTGGCATCCCAGGTAGACAGCCCGTT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTTCTCCTCTGGGCCATaGCAGGGCCCCATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWFSSGP*QGPMPK
Trigger: CTTGGGCATGGGGCCCTGCCATGGCCCAGAGGAGAA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTGGGTGAGCTTGGGGTaGGGGAACCTGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTWVSLG*GNLAAG
Trigger: CCCAGCAGCCAGGTTCCCTCACCCCAAGCTCACCCA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTGGCCAGGCTGGTCTTaGACTCCAGACCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWWPGWS*TPDLRR
Trigger: TCGCCTGAGGTCTGGAGTTCAAGACCAGCCTGGCCA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGCAGCTCCCCGCAGCTaGAAGCCACACTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPAAPRS*KPHSQH
Trigger: GTGTTGAGAGTGTGGCTTTCAGCTGCGGGGAGCTGC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGTGAGGGAACCTGGCTaGTGGGAGTGGAAACGCCCT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWVREPG*WEWKRP
Trigger: AGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCAC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGGCACCTCCCTCTCCTaGAACTTCCGGTCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPGTSLS*NFRSAC
Trigger: ACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGAGGCAGGACGGAGATaGAGGAAGCTGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWEAGRR*RKLVQP
Trigger: AGGCTGCACCAGCTTCCTCCATCTCCGTCCTGCCTC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGATCCAAACCTCTGCCTaGGCTCTGCCCACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWIQTSA*ALPTRC
Trigger: ACACCTGGTGGGCAGAGCTCAGGCAGAGGTTTGGAT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGACTCCTGGCTTCAAGTaGTCTGCCCCCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWTPGFK*SAPCQH
Trigger: ATGCTGGCAGGGGGCAGATCACTTGAAGCCAGGAGT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCTGGGGCTGAGCGTCTaGAGGGCTTGCTCTGAATTC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPLGLSV*RACSEF
Trigger: GAATTCAGAGCAAGCCCTGCAGACGCTCAGCCCCAG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTCCAGGCAAGCGGCTTaGCCTGGGGGTGGAACGGGC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHSRQAA*PGGGTG
Trigger: GCCCGTTCCACCCCCAGGGCAAGCCGCTTGCCTGGA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGTTGGCAGGTGCCTCTaGCCCACTGGAGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWVGRCL*PTGADD
Trigger: ATCATCTGCTCCAGTGGGGCAGAGGCACCTGCCAAC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCAAGGCATGTCCTGCTaGCAGGCCTGCAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPQGMSC*QACSPL
Trigger: TAAGGGACTGCAGGCCTGGCAGCAGGACATGCCTTG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGCCAAGGCATGTCCTaGTGCCAGGCCTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSQGMS*CQACSP
Trigger: GGGACTGCAGGCCTGGCAGCAGGACATGCCTTGGCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGACCACTGTGCACTCTaGCTCTCATGCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPDHCAL*LSCPQL
Trigger: GAGCTGAGGGCATGAGAGGCAGAGTGCACAGTGGTC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTCCCTTCATTTTGCCTaGCCTGCCACTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSLHFA*PATSSR
Trigger: GCGGGAGGAAGTGGCAGGGCAGGCAAAATGAAGGGA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCCACACAAGGCACCGTaGGGACAGAGATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWPHKAP*GQRCCS
Trigger: AGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGCTGACGGCTTGGGGTaGGGCCACAGTGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWADGLG*GHSEPS
Trigger: GCTGGGCTCACTGTGGCCCCACCCCAAGCCGTCAGC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGGAGATGGAGGAAGCTaGTGCAGCCTAGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWGDGGS*CSLACL
Trigger: AAGGCAGGCTAGGCTGCACCAGCTTCCTCCATCTCC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTGGCTCCAGTGGGTCTaGGGGACGGTCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWWLQWV*GTVRGP
Trigger: CGGACCTCGGACCGTCCCCCAGACCCACTGGAGCCA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGGGCTCTGGCCCCATaGAGGGTGGATGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTRALAP*RVDGLR
Trigger: TCTCAGTCCATCCACCCTTCATGGGGCCAGAGCCCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGGTCTTCCTCAGGCCTaGCAGCTGCCCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHGLPQA*QLPLAS
Trigger: GGAAGCCAGGGGCAGCTGTCAGGCCTGAGGAAGACC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGGGGGAGGACAGATTTaGCATAACTGGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWGGGQI*HNWSSL
Trigger: GAGGCTGGACCAGTTATGTCAAATCTGTCCTCCCCC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTCCTGCTGCCAGGCCTaGAGTCCCTTAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSCCQA*SPLTPL
Trigger: GAGGGGAGTTAAGGGACTGCAGGCCTGGCAGCAGGA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCCTTCAGGGACCAATaGAACAGGAGAGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWAFRDQ*NRRGIP
Trigger: GGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCCTGCCGCTCCTGCCTaGCTCAATGCAACGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTPAAPA*LNATVS
Trigger: TGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCTCAGTGGGGCAAACTaGCACTGGACACACCCATCA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPLSGAN*HWTHPS
Trigger: TGATGGGTGTGTCCAGTGGCAGTTTGCCCCACTGAG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATTAGGCTGTGTCCCCTaGCCCACCTCGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALGCVP*PTSPSL
Trigger: CAGGCTGGGCGAGGTGGGGCAGGGGACACAGCCTAA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCCACCCCTAATGCCTaGCCCCACTTCATATTCCAG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWATPNA*PHFIFQ
Trigger: CTGGAATATGAAGTGGGGGCAGGCATTAGGGGTGGC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTGGTGCAGCCTAGCCTaGCTTGTGCCAAGGACACCC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTWCSLA*LVPRTP
Trigger: GGGTGTCCTTGGCACAAGGCAGGCTAGGCTGCACCA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCTCTCCTGGGGACTCTaGCGCCTGGGTCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHLSWGL*RLGLLD
Trigger: GTCCAGGAGACCCAGGCGCCAGAGTCCCCAGGAGAG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGTCGGCTTGTGGCCTaGGGCCGCCATCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGRLVA*GRHPGP
Trigger: CGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCCAGTGGGGAAGGTCTaGAGCACTGGGGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWPVGKV*STGGSP
Trigger: TGGGCTGCCCCCAGTGCTCCAGACCTTCCCCACTGG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCAGTGGGGAAGGTCTaGAGCACTGGGGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHPVGKV*STGGSP
Trigger: TGGGCTGCCCCCAGTGCTCCAGACCTTCCCCACTGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTGGGCAGGAGAGAGATaGGAGAAGCAGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWWAGER*EKQWPL
Trigger: AAGTGGCCACTGCTTCTCCCATCTCTCTCCTGCCCA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGAGGGAACCTGGCTGCTaGGAGTGGAAACGCCCTATA +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWREPGC*EWKRPI
Trigger: TATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCCCGCATCTGCCCCTTaGCTTTCTCAACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPPASAP*LSQPFT
Trigger: AGTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCCCGCATCTGCCCCTTaGCTTTCTCAACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWPASAP*LSQPFT
Trigger: AGTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGCCCGCAGTCGATCCTaGTCTCTTGCTGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTARSRS*SLAVRQ
Trigger: CTGCCTCACAGCAAGAGACCAGGATCGACTGCGGGC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTACCACATACCTGCCCTaGGGCCTTCAGGGACCAATG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTTTYLP*GLQGPM
Trigger: CATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGTGTCCCGGTTCCCTaGGAGTGTGCAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGVPVP*ECAGGP
Trigger: CGGGCCACCTGCACACTCTCAGGGAACCGGGACACC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCCTCAGTGCCGCAATaGAGTACTCCACCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHPSVPQ*STPPSR
Trigger: CCGGCTGGGTGGAGTACTTCATTGCGGCACTGAGGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCACTGTGCTGACAGATaGTGGGTTGGCAGGCACTTT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWHCADR*WVGRHF
Trigger: AAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGACGATCCTAGCTCACTaGAGCTTCAAGCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWTILAH*SFKLLG
Trigger: GCCCAGAAGCTTGAAGCTGCAGTGAGCTAGGATCGT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCTCCTGGTTCCAGGGTaGAGGTTGCTGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTLLVPG*RLLDLE
Trigger: CTCCAAGTCCAGCAACCTGCACCCTGGAACCAGGAG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGCAGTGAGCCGAAGTTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTAVSRS*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAACTTCGGCTCACTGC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCAGGGGGCCACCATCTaGATTCCTTGGGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTQGATI*IPWDGS
Trigger: AGAGCCATCCCAAGGAATCCAGATGGTGGCCCCCTG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGATGGGCAATTTGGATaGTGCTGGATTGGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWDGQFG*CWIGER
Trigger: GCGCTCACCAATCCAGCACCATCCAAATTGCCCATC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGCGCCGGCGGGTGTTaGAGCTGCTGGGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGAGGC*SCWGLL
Trigger: GAGGAGACCCCAGCAGCTCCAACACCCGCCGGCGCC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAACGGGCTGTCTACCTaGGATGCCAGCACGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHNGLST*DASTPG
Trigger: GCCTGGCGTGCTGGCATCCCAGGTAGACAGCCCGTT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGTCGGCTTGTGGCCTaGGGCCGCCATCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGRLVA*GRHPGP
Trigger: CGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTCTGGGCCAGGCACTTaGCAAACACCTGTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSGPGT*QTPVGS
Trigger: TGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCAACCTCCGCATCCTaGGTTCATGGAATTCTCGTG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWATSAS*VHGILV
Trigger: CACGAGAATTCCATGAACCCAGGATGCGGAGGTTGC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGCGGGGCTAGGGGACTaGGAAGGTCCCTCAACCCTT +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAAGLGD*EGPSTL
Trigger: AAGGGTTGAGGGACCTTCCCAGTCCCCTAGCCCCGC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCGGGGCTAGGGGACTaGGAAGGTCCCTCAACCCTT +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHAGLGD*EGPSTL
Trigger: AAGGGTTGAGGGACCTTCCCAGTCCCCTAGCCCCGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCCACCTCGCCCAGCCTaGGGCATTGAGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTPPRPA*GIEPGW
Trigger: CCAGCCAGGCTCAATGCCCCAGGCTGGGCGAGGTGG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCCCCTACTGTACTGGTaGGTGGTGGGAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWPLLYW*VVGGGS
Trigger: TGAGCCCCCTCCCACCACCCACCAGTACAGTAGGGG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGTGATTCAGATGGTGTaGGAATGGCACCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPVIQMV*EWHLGM
Trigger: CATCCCCAGGTGCCATTCCCACACCATCTGAATCAC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGCACCACCAGGAGTGTaGCTACCAGCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWAPPGV*LPAPLS
Trigger: TGACAGGGGTGCTGGTAGTCACACTCCTGGTGGTGC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAGGTCACAGAGCTGGTaGGAGGCAGGTTGGGACGCA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHRSQSW*EAGWDA
Trigger: TGCGTCCCAACCTGCCTCTCACCAGCTCTGTGACCT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGACATGCTACGGAGTTTaGATCTTGCCTAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWTCYGV*ILPSTG
Trigger: CCCTGTGCTAGGCAAGATTCAAACTCCGTAGCATGT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCTGGCCAGAAACCCATaGCCAGCCTGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHLARNP*PAWEAK
Trigger: CTTGGCTTCCCAGGCTGGTCATGGGTTTCTGGCCAG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGCGTCTGCAGGGCTTaGTCTGAATTCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSVCRA*SEFSPG
Trigger: CCCAGGAGAGAATTCAGAGCAAGCCCTGCAGACGCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACCCTCTGCAGCCCCTaGAGAGGCCAAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTLCSP*RGQARG
Trigger: TCCCCTGGCTTGGCCTCTGCAGGGGCTGCAGAGGGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACAGAGAGTTGGCAGGTaGCTCTGCCCCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAQRVGR*LCPTGA
Trigger: TGCTCCAGTGGGGCAGAGGCACCTGCCAACTCTCTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCCCTATTCTCAGAGCTaGTGTCTAGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTPYSQS*CLARLS
Trigger: GCTCAGCCTGGCTAGACAGCAGCTCTGAGAATAGGG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATCATGGCAGGGCCCCATaGCCAAGGAGGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNHGRAP*PRRCWH
Trigger: GTGCCAGCACCTCCTTGGGCATGGGGCCCTGCCATG...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCATGGCAGGGCCCCATaGCCAAGGAGGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDHGRAP*PRRCWH
Trigger: GTGCCAGCACCTCCTTGGGCATGGGGCCCTGCCATG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTAGGCTGCCTGTGCTaGAGAGCTGCACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALGCLC*RAAPLT
Trigger: GGTCAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGGAGAGGGGCTAATATaGAGATACCATTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWGEGLI*RYHCCR
Trigger: CCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCTGAAGACAGGATCCTaGGCTACTCCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPLKTGS*ATPTLN
Trigger: GTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGGGGGTGCTATCAGCTaGTTAATGGAGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPGGAIS*LMEHHG
Trigger: TCCATGATGCTCCATTAAGCAGCTGATAGCACCCCC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTCTGAACTTAGTGGCTaGCAGCTTCTTCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSELSG*QLLPNP
Trigger: GGGATTGGGAAGAAGCTGGCAGCCACTAAGTTCAGA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTCTGAACTTAGTGGCTaGCAGCTTCTTCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWSELSG*QLLPNP
Trigger: GGGATTGGGAAGAAGCTGGCAGCCACTAAGTTCAGA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGGTTCCCTGAGAGTGTaGAGGTGGCCCGCAGTCGAT +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHGSLRV*RWPAVD
Trigger: ATCGACTGCGGGCCACCTGCACACTCTCAGGGAACC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGGGACTCTGGCGCCTaGGTCTCCTGGACAGGCATG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGDSGA*VSWTGM
Trigger: CATGCCTGTCCAGGAGACCCAGGCGCCAGAGTCCCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGGGACTCTGGCGCCTaGGTCTCCTGGACAGGCATG +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGDSGA*VSWTGM
Trigger: CATGCCTGTCCAGGAGACCCAGGCGCCAGAGTCCCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGGGTTCTCAGCCACGTaGATCCCAAAGGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAGFSAT*IPKVPS
Trigger: CGAGGGCACCTTTGGGATCCACGTGGCTGAGAACCC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTGCCCTCCAGGAGCTaGATGCTGGGGTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHLPSRS*MLGFSA
Trigger: GGCTGAGAACCCCAGCATCCAGCTCCTGGAGGGCAA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACTTCCGGTCGGCTTGTaGCCTGGGGCCGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSLPVGL*PGAAIR
Trigger: CCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGCTGCTCTCAGGACTTaGTTCAGCCAAGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTAALRT*FSQGMS
Trigger: GGACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGAAGGTCTGGAGCACTaGGGGCAGCCCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIEGLEH*GQPRTQ
Trigger: CTGGGTCCTGGGCTGCCCCCAGTGCTCCAGACCTTC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATGCAACGGTCTCAGGCTaGGCTGCCAGGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNATVSG*AARMGG
Trigger: GCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGC...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGCCAGGTCCCCCACTaGGAGTGGAGGTCTCACTCC +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGQVPH*EWRSHS
Trigger: GGAGTGAGACCTCCACTCCCAGTGGGGGACCTGGCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGGGCACTGGTCCCTCTaGCCCCACCCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQGHWSL*PHPAFT
Trigger: GGTGAAGGCTGGGTGGGGCCAGAGGGACCAGTGCCC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGAAGCCCCTGCCTCAGTaGGGCAAACTGCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWKPLPQ*GKLPLD
Trigger: GTCCAGTGGCAGTTTGCCCCACTGAGGCAGGGGCTT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAAGCCCCTGCCTCAGTaGGGCAAACTGCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAKPLPQ*GKLPLD
Trigger: GTCCAGTGGCAGTTTGCCCCACTGAGGCAGGGGCTT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTACTGTACTGGTGGGTaGTGGGAGGGGGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHYCTGG*WEGAHR
Trigger: CCGATGAGCCCCCTCCCACCACCCACCAGTACAGTA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCACCCCCTACTGTACTaGTGGGTGGTGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTHPLLY*WVVGGG
Trigger: GCCCCCTCCCACCACCCACCAGTACAGTAGGGGGTG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp TGGGACAGTAGTAGCAGCCAGGCACCTCCAAAGAGCTaGACAACAGAGGAACCCGCTTCGGCCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WDSSSSQAPPKS*TTEEPASAPPL
Trigger: CAGAGGAGGGGCCGAAGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTGCCTGGCTGCTACTACTGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGAGGTTGCAGTGAGCTaGGATCATGCCACTACACTC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTEVAVS*DHATTL
Trigger: GAGTGTAGTGGCATGATCTCAGCTCACTGCAACCTC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTCTGCCCCTAAGCACTaGGGAGGGCACTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTSAPKH*GGHWSL
Trigger: GAGGGACCAGTGCCCTCCTCAGTGCTTAGGGGCAGA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCACCTCCAAAGAGCTTaGCAACAGAGGAACCCGCTT +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTHLQRA*QQRNPL
Trigger: AAGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATATGCCCAGCACCGAATaGGGCCTTCATAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHMPSTE*GLHSLG
Trigger: CCCAAGGCTATGAAGGCCTCATTCGGTGCTGGGCAT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATACCCTGTTTACCCTCTaGAGCCCCTGCAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHTLFTL*SPCRGQ
Trigger: TTGGCCTCTGCAGGGGCTGCAGAGGGTAAACAGGGT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGACCCTGTTTACCCTCTaGAGCCCCTGCAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWTLFTL*SPCRGQ
Trigger: TTGGCCTCTGCAGGGGCTGCAGAGGGTAAACAGGGT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGGCCTGGTCACTCTCTaGACCCTGTTTACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWGLVTL*TLFTLC
Trigger: GCAGAGGGTAAACAGGGTGCAGAGAGTGACCAGGCC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCACTGTGCTGACAGATaGTGGGTTGGCAGGCACTTT +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTHCADR*WVGRHF
Trigger: AAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCTGTCTACCTGGGATaGCAGCACGCCAGGCTTACT +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHAVYLG*QHARLT
Trigger: AGTAAGCCTGGCGTGCTGGCATCCCAGGTAGACAGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACCTGTGCTGCAGAGCTaGACCCTTGACCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAPVLQS*TLDHCA
Trigger: TGCACAGTGGTCAAGGGTGCAGCTCTGCAGCACAGG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTCCATCCTGTACAGCTaGCCAGTGGACATACCTCTC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSILYS*PVDIPL
Trigger: GAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTCCTGGTTCCAGGGTaGAGGTTGCTGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALLVPG*RLLDLE
Trigger: CTCCAAGTCCAGCAACCTGCACCCTGGAACCAGGAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGCTTTCCCCACCAAGTaGAGCTCCCCGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWAFPTK*SSPQLK
Trigger: TTTCAGCTGCGGGGAGCTGCACTTGGTGGGGAAAGC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTTAGGCTGTGTCCCCTaGCCCACCTCGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLGCVP*PTSPSL
Trigger: CAGGCTGGGCGAGGTGGGGCAGGGGACACAGCCTAA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCCAGGTGAGGGCCTGTaGCATGGCACCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGPGEGL*HGTSLS
Trigger: GGAGAGGGAGGTGCCATGCCACAGGCCCTCACCTGG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTACTCACTGTCCACGTaGAGAAGCAAGACCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPYSLST*RSKTRS
Trigger: ACTTCTGGTCTTGCTTCTCCACGTGGACAGTGAGTA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGAGTGGCCACTTGCTCTaGGCCAGGCACTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWSGHLL*ARHLAN
Trigger: GTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGCTGGACTTGGAGCATaGGATGAAGAGATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWAGLGA*DEEMFR
Trigger: TCTGAACATCTCTTCATCCCATGCTCCAAGTCCAGC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTCTCACTCCCTTCCTTaGGTTCTGACCTCCACATTA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSHSLP*VLTSTL
Trigger: TAATGTGGAGGTCAGAACCCAAGGAAGGGAGTGAGA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGGCACTGGTCCCTCTaGCCCCACCCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGHWSL*PHPAFT
Trigger: GGTGAAGGCTGGGTGGGGCCAGAGGGACCAGTGCCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAAAGAACATCCAGCCTaGGGCCCCGGGGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAKEHPA*GPGVRV
Trigger: AACTCTGACCCCGGGGCCCCAGGCTGGATGTTCTTT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTCTCAGCCTCCCGAGTaGCTGAAATTACAGATGTAC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSQPPE*LKLQMY
Trigger: GTACATCTGTAATTTCAGCCACTCGGGAGGCTGAGA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCACAGTTCTAGAGGCTaGGAAGTCCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWHSSRG*EVQDQG
Trigger: ACCTTGATCTTGGACTTCCCAGCCTCTAGAACTGTG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGGACATAGCTTTCTGTaGTGTACATACCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWGHSFL*CTYPGV
Trigger: CACTCCTGGGTATGTACACCACAGAAAGCTATGTCC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCTGGTCTCGAACTCCTaGCTTCTAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTLVSNS*LLAILP
Trigger: TGGGAGGATTGCTAGAAGCCAGGAGTTCGAGACCAG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTAACTCCCCTCTaGCCCAGCCTCCACAATCCC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIPLTPL*PSLHNP
Trigger: GGGATTGTGGAGGCTGGGTCAGAGGGGAGTTAAGGG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAGGTCACAGAGCTGGTaGGAGGCAGGTTGGGACGCA +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDRSQSW*EAGWDA
Trigger: TGCGTCCCAACCTGCCTCTCACCAGCTCTGTGACCT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTCCCCAACAGTGGGTaGGCTTGGGGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLPNSG*AWGEGT
Trigger: GGTTCCCTCACCCCAAGCTCACCCACTGTTGGGGAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTGGCCAGGCTGGTCTTaGACTCCAGACCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTWPGWS*TPDLRR
Trigger: TCGCCTGAGGTCTGGAGTTCAAGACCAGCCTGGCCA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGCGGGAGAATGGCCTaGACCCAGGAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGGRMA*TQEVEV
Trigger: GACCTCCACCTCCTGGGTTCAGGCCATTCTCCCGCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACGCAGGTGGAGCACTTaGGGTCAGGAGTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTARRWST*GQEFKN
Trigger: GTTCTTGAACTCCTGACCTCAAGTGCTCCACCTGCG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATGCAGCTCCCCGCAGCTaGAAGCCACACTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNAAPRS*KPHSQH
Trigger: GTGTTGAGAGTGTGGCTTTCAGCTGCGGGGAGCTGC...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTTAGACCAAGGACTCTaGACTCACTTTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTLDQGL*THFPWR
Trigger: CCTCCAGGGAAAGTGAGTTCAGAGTCCTTGGTCTAA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTACCTACACTGGTTTTaGACTCCTGGCCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTYLHWF*TPGLKQ
Trigger: CTGCTTGAGGCCAGGAGTTCAAAACCAGTGTAGGTA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGATTATTCTGTGTCACTaGGGCCTATCACAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWIILCH*GLSQCS
Trigger: AGAGCACTGTGATAGGCCTCAGTGACACAGAATAAT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACCCACCTCAGTCTCCTaGATCACTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAPTSVS*ITGITG
Trigger: GCCTGTAATCCCAGTGATTCAGGAGACTGAGGTGGG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAACAGGTCCTGGAGGGTaGGGAAAGTGGGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESITGPGG*GKWELA
Trigger: AGCCAGCTCCCACTTTCCTCACCCTCCAGGACCTGT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTTGCGAGGAAATCAGTaGTTCAGATGGTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWLRGNQ*FRWCGN
Trigger: ATTCCCACACCATCTGAATCACTGATTTCCTCGCAA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTAGCCAGGCTGAGCTaGCTCCAGTGGCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLARLS*LQWRRR
Trigger: CCGCCGGCGCCACTGGAGGCAGCTCAGCCTGGCTAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGCCTTCAGGGACCAATaGAACAGGAGAGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWAFRDQ*NRRGIP
Trigger: GGGAATGCCTCTCCTGTTGCATTGGTCCCTGAAGGC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGAGAGCAGCCACCCTaGCGCTCCTGCCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGEQPP*RSCLPQ
Trigger: TTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCCCTGTTGCCCAGCATaGCTGGACCCTCAACACTTA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWPCCPA*LDPQHL
Trigger: TAAGTGTTGAGGGTCCAGGCATGCTGGGCAACAGGG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGTGAGGGAACCTGGCTaGTGGGAGTGGAAACGCCCT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDVREPG*WEWKRP
Trigger: AGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCTCAC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTCCAGGGTGCAGGTTaGTGGACTTGGAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHFQGAG*WTWSMG
Trigger: TCCCATGCTCCAAGTCCAGCAACCTGCACCCTGGAA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTCAGTGGGGCAAACTaGCACTGGACACACCCATCA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALSGAN*HWTHPS
Trigger: TGATGGGTGTGTCCAGTGGCAGTTTGCCCCACTGAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTGGCTTCAAGTGATCTaGCCCCTGCCAGCATCCCAA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHWLQVI*PLPASQ
Trigger: TTGGGATGCTGGCAGGGGGCAGATCACTTGAAGCCA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTCCGCTCTGTCCCCATaGCAACAATCTCCAATCACA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSALSP*QQSPIT
Trigger: TGTGATTGGAGATTGTTGGCATGGGGACAGAGCGGA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGGCTTCCCTTCATTTTaGCTGCCCTGCCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWGFPSF*LPCHFL
Trigger: GAGGAAGTGGCAGGGCAGGCAAAATGAAGGGAAGCC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATGGTGCAGCCTAGCCTaGCTTGTGCCAAGGACACCC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIWCSLA*LVPRTP
Trigger: GGGTGTCCTTGGCACAAGGCAGGCTAGGCTGCACCA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAACCATCTGGATTCCTTaGGATGGCTCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTATIWIP*DGSGAE
Trigger: CTCAGCCCCAGAGCCATCCCAAGGAATCCAGATGGT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGGAGGAAGCTCCTCTaGAGGACATGGATGATAACC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTRRKLL*RTWMIT
Trigger: GGTTATCATCCATGTCCTCCAGAGGAGCTTCCTCCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGCAACGGTCTCAGGCTaGGCTGCCAGGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSATVSG*AARMGG
Trigger: GCCTCCCATCCTGGCAGCCCAGCCTGAGACCGTTGC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGCCTCCTGAATAGCTaGGATTACAGACGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSLLNS*DYRRLP
Trigger: TGGCAGACGTCTGTAATCCCAGCTATTCAGGAGGCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTCAGGTCCCCAAGGATaGGTGGCCAGGTCCCCCACT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSGPQG*VARSPT
Trigger: AGTGGGGGACCTGGCCACCCATCCTTGGGGACCTGA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGGATTTCTGCCTGCTaGAAGGGCTCTGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGISAC*KGSVRA
Trigger: GGCCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGGGATTTCTGCCTGCTaGAAGGGCTCTGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTGISAC*KGSVRA
Trigger: GGCCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGAAATCTCCACCTACTaGGTTCAAGCTATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWEISTY*VQAILL
Trigger: CAGGAGAATAGCTTGAACCCAGTAGGTGGAGATTTC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGTACATACCCAGGAGTaGAACTGCTGGATCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPVHTQE*NCWISL
Trigger: TAAACTGATCCAGCAGTTCCACTCCTGGGTATGTAC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTATGACAATAGACTCTaGCCAGAAACCCATGACCAG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWYDNRL*PETHDQ
Trigger: CTGGTCATGGGTTTCTGGCCAGAGTCTATTGTCATA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTGAGAGTGTGCAGGTaGCCCGCAGTCGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILRVCR*PAVDPG
Trigger: ACCAGGATCGACTGCGGGCCACCTGCACACTCTCAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428216.4
3UTR CAA 72 bp GTGAGCCCAGCCCCTGATGGCTCTAGTTCTTGTCCCTaGCAGAGCTCAGAAATGGAGGTGGCTCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VSPAPDGSSSCP*QSSEMEVAPVP
Trigger: AGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCAAGGGACAAGAACTAGAGCCATCAGGGGCTGGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGAAGGGTGGATGGACTaGGAGGAAACGAGACTCGGG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTEGWMD*EETRLG
Trigger: CCCGAGTCTCGTTTCCTCTCAGTCCATCCACCCTTC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGGGCTCTGGCCCCATaGAGGGTGGATGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGRALAP*RVDGLR
Trigger: TCTCAGTCCATCCACCCTTCATGGGGCCAGAGCCCT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTCTGTGTCCTGCTCCTaGTGCCCGCTGGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSVSCS*CPLEVR
Trigger: TCTGACCTCCAGCGGGCATCAGGAGCAGGACACAGA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACAGCACGGGTTGAGTTaGTGGGCAATTTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAQHGLS*WAIWMV
Trigger: CACCATCCAAATTGCCCATCAACTCAACCCGTGCTG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCATGCCAGCACGGGTTaGGTTGATGGGCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHHASTG*VDGQFG
Trigger: TCCAAATTGCCCATCAACTCAACCCGTGCTGGCATG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCAGGAGGTGCTGGCACTaGTGGCAAGATCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTRRCWH*WQDPRS
Trigger: GCTTCGAGGATCTTGCCATCAGTGCCAGCACCTCCT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATAGGAGGTGCTGGCACTaGTGGCAAGATCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNRRCWH*WQDPRS
Trigger: GCTTCGAGGATCTTGCCATCAGTGCCAGCACCTCCT...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCCCTTAACTCCCCTCTaGCCCAGCCTCCACAATCCC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGPLTPL*PSLHNP
Trigger: GGGATTGTGGAGGCTGGGTCAGAGGGGAGTTAAGGG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCTCCCCAACAGTGGGTaGGCTTGGGGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILPNSG*AWGEGT
Trigger: GGTTCCCTCACCCCAAGCTCACCCACTGTTGGGGAG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTCTGCCCCTAAGCACTaGGGAGGGCACTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVISAPKH*GGHWSL
Trigger: GAGGGACCAGTGCCCTCCTCAGTGCTTAGGGGCAGA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGGGAGAAAGAAGCAGTaGCAGCTCTTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWGRKKQ*QLLGFE
Trigger: CTCAAAGCCCAAGAGCTGTCACTGCTTCTTTCTCCC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGCTGTTGTAGGGGATaGTGTGGGCCGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSCCRG*CGPQQV
Trigger: CACCTGCTGCGGCCCACAGCATCCCCTACAACAGCT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGCTGTTGTAGGGGATaGTGTGGGCCGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSCCRG*CGPQQV
Trigger: CACCTGCTGCGGCCCACAGCATCCCCTACAACAGCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTTGGCTCCTTCTCTCTaGAGCTGTTGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWLAPSL*SCCRGC
Trigger: GCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATTGGCTCCTTCTCTCTaGAGCTGTTGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALAPSL*SCCRGC
Trigger: GCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCTGGGGCTGAGCGTCTaGAGGGCTTGCTCTGAATTC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLGLSV*RACSEF
Trigger: GAATTCAGAGCAAGCCCTGCAGACGCTCAGCCCCAG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGCTGGAGGTCGCACCTaGTGTGTGGGTACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIAGGRT*CVGTAQ
Trigger: CTGGGCAGTACCCACACAGCAGGTGCGACCTCCAGC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGGCCTGGTCACTCTCTaGACCCTGTTTACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTGLVTL*TLFTLC
Trigger: GCAGAGGGTAAACAGGGTGCAGAGAGTGACCAGGCC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATGCTGTCTACCTGGGATaGCAGCACGCCAGGCTTACT +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNAVYLG*QHARLT
Trigger: AGTAAGCCTGGCGTGCTGGCATCCCAGGTAGACAGC...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTGGGGACAGAGATGCTaGTCTCAGGACTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWWGQRC*SQDLVQ
Trigger: CTGAACCAAGTCCTGAGAGCAGCATCTCTGTCCCCA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATCACACACCACATACCTaGCCTGAGGCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNHTPHT*PEAFRD
Trigger: GTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTG...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGCAGTGAGCCGAAGTTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDAVSRS*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAACTTCGGCTCACTGC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAGGGTATTGAAGAGATaGCAGAGGGTGTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHRVLKR*QRVSRF
Trigger: GAACCGGGACACCCTCTGGCATCTCTTCAATACCCT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCCATGAAGGGTGGATaGACTGAGAGGAAACGAGAC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHPMKGG*TERKRD
Trigger: GTCTCGTTTCCTCTCAGTCCATCCACCCTTCATGGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTGGAGAGAGGGCTCTaGCCCCATGAAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLERGL*PHEGWM
Trigger: CATCCACCCTTCATGGGGCCAGAGCCCTCTCTCCAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGACGGTCCGAGGTCCCTaGTCTCTTGCTGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQTVRGP*SLAVRQ
Trigger: CTGCCTCACAGCAAGAGACCAGGGACCTCGGACCGT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416600.6
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGTCGCACCTGCTGTGTaGGTACTGCCCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDVAPAV*VLPSSV
Trigger: CACAGAACTGGGCAGTACCCACACAGCAGGTGCGAC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATGTGCTGACAGATGCTaGGTTGGCAGGCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTACADRC*VGRHFQ
Trigger: CTGAAAGTGCCTGCCAACCCAGCATCTGTCAGCACA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTGCTGCTCCCGTCAGTaGGGACTGTGCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGCCSRQ*GLCWQT
Trigger: TGTCTGCCAGCACAGTCCCCACTGACGGGAGCAGCA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGCGCCGGCGGGTGTTaGAGCTGCTGGGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGAGGC*SCWGLL
Trigger: GAGGAGACCCCAGCAGCTCCAACACCCGCCGGCGCC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTTCTCCTCTGGGCCATaGCAGGGCCCCATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIFSSGP*QGPMPK
Trigger: CTTGGGCATGGGGCCCTGCCATGGCCCAGAGGAGAA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGCACCTCCCTCTCCTaGAACTTCCGGTCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGTSLS*NFRSAC
Trigger: ACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGGAACAGATGGGTGGTaGGAAGAGCCCAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTGTDGW*EEPRAS
Trigger: TGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATCAGGAACGGAACAGATaGGTGGTGGGAAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNQERNR*VVGRAQ
Trigger: CTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTG...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAGGGAAAGAGGAGGCTaGAGAGGAGCTCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDRERGG*RGAPQV
Trigger: GACCTGTGGAGCTCCTCTCCAGCCTCCTCTTTCCCT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTGCCTTGTCCAGCAATaGTTCCCTGAAAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTCLVQQ*FPEKNP
Trigger: TGGGTTCTTTTCAGGGAACCATTGCTGGACAAGGCA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCAGGGTGTAGATCCCTaGAGGCTGACGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGQGVDP*RLTAWG
Trigger: ACCCCAAGCCGTCAGCCTCCAGGGATCTACACCCTG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCAACCTCCGCATCCTaGGTTCATGGAATTCTCGTG +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHATSAS*VHGILV
Trigger: CACGAGAATTCCATGAACCCAGGATGCGGAGGTTGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTGTATCCCAGCACTTTaGGAAGCCAACGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWCIPAL*EANAGG
Trigger: TCCACCTGCGTTGGCTTCCCAAAGTGCTGGGATACA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTCTCACTCCCTTCCTTaGGTTCTGACCTCCACATTA +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSHSLP*VLTSTL
Trigger: TAATGTGGAGGTCAGAACCCAAGGAAGGGAGTGAGA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGCGGGAGAAAGAAGGTaGAGAGGGGCTAATATGCAG +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWAGERR*RGANMQ
Trigger: CTGCATATTAGCCCCTCTCCACCTTCTTTCTCCCGC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGGGGCAAACTGCCACTaGACACACCCATCATTCATC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHGANCH*THPSFI
Trigger: GATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAAAGAACATCCAGCCTaGGGCCCCGGGGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIKEHPA*GPGVRV
Trigger: AACTCTGACCCCGGGGCCCCAGGCTGGATGTTCTTT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGCAGGAGTGGAACTGCTaGATCAGTTTATACGTATGT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWQEWNC*ISLYVC
Trigger: ACATACGTATAAACTGATCCAGCAGTTCCACTCCTG...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGATTTGGGTTGGTGGATaGACATTTGGGTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWIWVGG*TFGLFQ
Trigger: CTGAAACAACCCAAATGTCCATCCACCAACCCAAAT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCTCCAACAGGGAGTCTaGAAACAAACTGACAATACT +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPLQQGV*KQTDNT
Trigger: AGTATTGTCAGTTTGTTTCCAGACTCCCTGTTGGAG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCCATTCCAGCGATGGTaGCCCCTCTCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWPFQRW*PLSESI
Trigger: TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACCATTCCAGCGATGGTaGCCCCTCTCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAPFQRW*PLSESI
Trigger: TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTGGTCTCGAACTCCTaGCTTCTAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALVSNS*LLAILP
Trigger: TGGGAGGATTGCTAGAAGCCAGGAGTTCGAGACCAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAGAGGGACTGAGCTCTaGGGGAGGACAGATTTGACA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTARGTEL*GRTDLT
Trigger: TGTCAAATCTGTCCTCCCCCAGAGCTCAGTCCCTCT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGGAGATGGAGGAAGCTaGTGCAGCCTAGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTGDGGS*CSLACL
Trigger: AAGGCAGGCTAGGCTGCACCAGCTTCCTCCATCTCC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGCCAGTAGATACAACTaGCCCTGTGGGTCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTASRYN*PCGSRQ
Trigger: TTGCCTGGACCCACAGGGTCAGTTGTATCTACTGGC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGCCAGTAGATACAACTaGCCCTGTGGGTCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIASRYN*PCGSRQ
Trigger: TTGCCTGGACCCACAGGGTCAGTTGTATCTACTGGC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCTTGAAGCTGGCATTTaGGAGGCCTTCAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHLEAGI*EAFRLT
Trigger: TGTCAACCTGAAGGCCTCTCAAATGCCAGCTTCAAG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATGCCTTCACCCCAAGGTaGAGTACGCTTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNAFTPR*STLSQV
Trigger: GACCTGAGAAAGCGTACTTCACCTTGGGGTGAAGGC...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATAGCAGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNSRRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCT...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGATGCCCAGCACCGAATaGGGCCTTCATAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQMPSTE*GLHSLG
Trigger: CCCAAGGCTATGAAGGCCTCATTCGGTGCTGGGCAT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTTGACCTCATGTCTGTaGAATTTATCCATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPLTSCL*NLSMLL
Trigger: CAGCAACATGGATAAATTTCACAGACATGAGGTCAA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGGGGAGGACAGATTTaGCATAACTGGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGGGQI*HNWSSL
Trigger: GAGGCTGGACCAGTTATGTCAAATCTGTCCTCCCCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGGTCCCTGGTCTCTTaGTGTGAGGCAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQRSLVS*CEAGQV
Trigger: TACCTGCCCTGCCTCACAGCAAGAGACCAGGGACCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416600.6
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTGCTGTGTGGGTACTaGCCAGTTCTGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLLCGY*PVLCPA
Trigger: AGCAGGACACAGAACTGGGCAGTACCCACACAGCAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTCCAGGCAAGCGGCTTaGCCTGGGGGTGGAACGGGC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCSRQAA*PGGGTG
Trigger: GCCCGTTCCACCCCCAGGGCAAGCCGCTTGCCTGGA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGTTGGCAGGTGCCTCTaGCCCACTGGAGCAGATGAT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQVGRCL*PTGADD
Trigger: ATCATCTGCTCCAGTGGGGCAGAGGCACCTGCCAAC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATCTCCTCATTTCTGCTaGTCCCGTCAGTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISPHFC*SRQWGL
Trigger: CAGTCCCCACTGACGGGAGCAGCAGAAATGAGGAGA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTCTCCTCATTTCTGCTaGTCCCGTCAGTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDSPHFC*SRQWGL
Trigger: CAGTCCCCACTGACGGGAGCAGCAGAAATGAGGAGA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGGCGGGTGTTGGAGCTaGTGGGGTCTCCTCATTTCT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQGGCWS*WGLLIS
Trigger: AGAAATGAGGAGACCCCAGCAGCTCCAACACCCGCC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCGTGGATCCCAAAGGTaGCCTCGGACTTATACTCAT +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWRGSQR*PRTYTH
Trigger: ATGAGTATAAGTCCGAGGGCACCTTTGGGATCCACG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCCTCCAGGAGCTGGATaGTGGGGTTCTCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIPPGAG*WGSQPR
Trigger: ACGTGGCTGAGAACCCCAGCATCCAGCTCCTGGAGG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGGGGCCAGGTGTACTaGAGGAACGGAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQRGQVY*RNGTDG
Trigger: CCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTCCTGCTGCCAGGCCTaGAGTCCCTTAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVISCCQA*SPLTPL
Trigger: GAGGGGAGTTAAGGGACTGCAGGCCTGGCAGCAGGA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCACACACCACATACCTaGCCTGAGGCCTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQHTPHT*PEAFRD
Trigger: GTCCCTGAAGGCCTCAGGGCAGGTATGTGGTGTGTG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGACCTTCCCAGGATTaGCCAGCAGGGGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWRPSQD*PAGEGA
Trigger: GGCCCCCTCCCCTGCTGGGCAATCCTGGGAAGGTCT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATCAGAAGTCTGACATCTaGCAAAGCCACACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNQKSDI*QSHTAP
Trigger: CGGGGCTGTGTGGCTTTGGCAGATGTCAGACTTCTG...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTGGAGGTGGCTCCTGTaGCTTGTCCAGCAATGGTTC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNWRWLL*LVQQWF
Trigger: GAACCATTGCTGGACAAGGCACAGGAGCCACCTCCA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCATCATTTGAAAAGTaGTGGGATCAGCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHASFEK*WDQPGA
Trigger: TGCGCCTGGCTGATCCCAGCACTTTTCAAATGATGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTCCAGACCCGCATCTaGCCCTTGGCTTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLQTRI*PLAFST
Trigger: GGTTGAGAAAGCCAAGGGGCAGATGCGGGTCTGGAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTGAAGACAGGATCCTaGGCTACTCCAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALKTGS*ATPTLN
Trigger: GTTCAGAGTTGGAGTAGCGCAGGATCCTGTCTTCAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTGGCTTCAAGTGATCTaGCCCCTGCCAGCATCCCAA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTWLQVI*PLPASQ
Trigger: TTGGGATGCTGGCAGGGGGCAGATCACTTGAAGCCA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTCCCTTCATTTTGCCTaGCCTGCCACTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSLHFA*PATSSR
Trigger: GCGGGAGGAAGTGGCAGGGCAGGCAAAATGAAGGGA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTTGGATACGCCTCCTaGAAGAAGCCGATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHFGYAS*KKPISS
Trigger: GCTGGAAATCGGCTTCTTGCAGGAGGCGTATCCAAA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAATACAACTGACCCTGTaGGTCCAGGCAAGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIIQLTL*VQASGL
Trigger: CAAGCCGCTTGCCTGGACCCACAGGGTCAGTTGTAT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATATACAACTGACCCTGTaGGTCCAGGCAAGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNIQLTL*VQASGL
Trigger: CAAGCCGCTTGCCTGGACCCACAGGGTCAGTTGTAT...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGGTTCTCAGCCACGTaGATCCCAAAGGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGFSAT*IPKVPS
Trigger: CGAGGGCACCTTTGGGATCCACGTGGCTGAGAACCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGGAACAGATGGGTGGTaGGAAGAGCCCAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGGTDGW*EEPRAS
Trigger: TGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGCTGCTCTCAGGACTTaGTTCAGCCAAGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTAALRT*FSQGMS
Trigger: GGACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCAACCTGGATTGCCAGTaGGGAAGGTCTGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTNLDCQ*GRSGAL
Trigger: CAGTGCTCCAGACCTTCCCCACTGGCAATCCAGGTT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTGTACAGCTGCCCAGTaGACATACCTCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTCTAAQ*TYLSPQ
Trigger: CTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGCTGACGGCTTGGGGTaGGGCCACAGTGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCADGLG*GHSEPS
Trigger: GCTGGGCTCACTGTGGCCCCACCCCAAGCCGTCAGC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAACTCCCCTAGGGCAGTaGAGTGAAAAAGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTATPLGQ*SEKAVA
Trigger: TGCTACAGCTTTTTCACTCCACTGCCCTAGGGGAGT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGTAGGGTCCACTCCTaGTTCCAGGGTGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGRVHS*FQGAGC
Trigger: GCAACCTGCACCCTGGAACCAGGAGTGGACCCTACC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGCTGGGACTATAGATaGGCGCCGCCATGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSWDYR*APPCPV
Trigger: AACTGGGCATGGCGGCGCCCATCTATAGTCCCAGCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGAAACCAGCTGTCAATTaGGTTGAGATGGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPKPAVN*VEMVSL
Trigger: AAGAGATACCATCTCAACCCAATTGACAGCTGGTTT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGACATGTGATAAGCTGTaGTTCACAGGCATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPTCDKL*FTGIKN
Trigger: GTTCTTTATGCCTGTGAACCACAGCTTATCACATGT...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATGGCTTCCTGAGGCCTaGCATTTTAGGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIWLPEA*HFRLCP
Trigger: GGGACACAGCCTAAAATGCCAGGCCTCAGGAAGCCA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGAAATCTCCACCTACTaGGTTCAAGCTATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTEISTY*VQAILL
Trigger: CAGGAGAATAGCTTGAACCCAGTAGGTGGAGATTTC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGAGCCCTCTAGCCATTaGGCTCACCCTCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIEPSSH*AHPHRQ
Trigger: CTGCCTGTGAGGGTGAGCCCAATGGCTAGAGGGCTC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATACAGTTTACAGGTCCTaGAGGGTGAGGAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHTVYRS*RVRKVG
Trigger: TCCCACTTTCCTCACCCTCCAGGACCTGTAAACTGT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGAAGGGTGGATGGACTaGGAGGAAACGAGACTCGGG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSEGWMD*EETRLG
Trigger: CCCGAGTCTCGTTTCCTCTCAGTCCATCCACCCTTC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGCACCAGGGGGCTTTaGGCTAGTTGGCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQCTRGL*ASWQLG
Trigger: TCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAATCCAAACCTCTGCCTaGGCTCTGCCCACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSIQTSA*ALPTRC
Trigger: ACACCTGGTGGGCAGAGCTCAGGCAGAGGTTTGGAT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTGGGTGAGCTTGGGGTaGGGGAACCTGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCWVSLG*GNLAAG
Trigger: CCCAGCAGCCAGGTTCCCTCACCCCAAGCTCACCCA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQRRRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCAGCTCACTGCAACCTCCGCCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCCCTTCCTTGGGTTCTaGCCTCCACATTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDPFLGF*PPHYLA
Trigger: AGCCAGATAATGTGGAGGTCAGAACCCAAGGAAGGG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGGAGAAAGAAGCAGTaGCAGCTCTTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGRKKQ*QLLGFE
Trigger: CTCAAAGCCCAAGAGCTGTCACTGCTTCTTTCTCCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAATTACTGAAGTTGGGTaGTGGGCTCATGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAITEVG*WAHGDL
Trigger: CAAATCCCCATGAGCCCATCACCCAACTTCAGTAAT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGCAGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSRRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGAGAGATGTGTTGGTGTaGAAAACCTCTATGTACTTT +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWRDVLV*KTSMYF
Trigger: AAAGTACATAGAGGTTTTTCACACCAACACATCTCT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCAGCCTCCCGAGTGGCTaGAATTACAGATGTACGCCA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTSLPSG*NYRCTP
Trigger: TGGCGTACATCTGTAATTTCAGCCACTCGGGAGGCT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGCGTCTGCAGGGCTTaGTCTGAATTCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSVCRA*SEFSPG
Trigger: CCCAGGAGAGAATTCAGAGCAAGCCCTGCAGACGCT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTACCCTCTGCAGCCCCTaGAGAGGCCAAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCTLCSP*RGQARG
Trigger: TCCCCTGGCTTGGCCTCTGCAGGGGCTGCAGAGGGT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGCGGGTGTTGGAGCTaGTGGGGTCTCCTCATTTCT +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGGCWS*WGLLIS
Trigger: AGAAATGAGGAGACCCCAGCAGCTCCAACACCCGCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCCTCTGCCTGAGCTCTaGCCACCAGGTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWPLPEL*PPGVSS
Trigger: GGAGGAGACACCTGGTGGGCAGAGCTCAGGCAGAGG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACGATCCTAGCTCACTaGAGCTTCAAGCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTILAH*SFKLLG
Trigger: GCCCAGAAGCTTGAAGCTGCAGTGAGCTAGGATCGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTCCATCCTGTACAGCTaGCCAGTGGACATACCTCTC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNSILYS*PVDIPL
Trigger: GAGAGGTATGTCCACTGGGCAGCTGTACAGGATGGA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGCTTTCCCCACCAAGTaGAGCTCCCCGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIAFPTK*SSPQLK
Trigger: TTTCAGCTGCGGGGAGCTGCACTTGGTGGGGAAAGC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGAGGGTCTTGCTTTGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWRVLLC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGGCAACAAAGCAAGACCCT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAAACCAAGAGGTGGATaGCTCATTGTTACTTCATGC +
Preference number: 4 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTKPRGG*LIVTSC
Trigger: GCATGAAGTAACAATGAGGCATCCACCTCTTGGTTT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCCCTGGAGGTGGGGGTaGTATCAGCTGCTTAATGGA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGPWRWG*YQLLNG
Trigger: TCCATTAAGCAGCTGATAGCACCCCCACCTCCAGGG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAAAGTGGGAGCTGGCTaGGGATGCAGGACAAGAACC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQKVGAG*GCRTRT
Trigger: GGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTCACAGCCCCTCAGTaGCGCAATGAAGTACTCCAC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLTAPQ*RNEVLH
Trigger: GTGGAGTACTTCATTGCGGCACTGAGGGGCTGTGAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATCTCCTGGACAGGCATaGGGTAACTTGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISPGQA*GNLAPS
Trigger: AGAAGGAGCCAAGTTACCCCATGCCTGTCCAGGAGA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACAGGAACGGAACAGATaGGTGGTGGGAAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSQERNR*VVGRAQ
Trigger: CTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAACATGGATGATAACCTaGATTGCCAGTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTATWMIT*IASGEG
Trigger: ACCTTCCCCACTGGCAATCCAGGTTATCATCCATGT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGAACTCAAGGCAGTTaGGCTCCTGGAGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGTQGS*APGEQP
Trigger: TGGCTGCTCTCCAGGAGCCCAACTGCCTTGAGTTCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTACTCACTGTCCACGTaGAGAAGCAAGACCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWYSLST*RSKTRS
Trigger: ACTTCTGGTCTTGCTTCTCCACGTGGACAGTGAGTA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAGTGGCCACTTGCTCTaGGCCAGGCACTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSSGHLL*ARHLAN
Trigger: GTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGGGCAGGAGAGAGATaGGAGAAGCAGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQWAGER*EKQWPL
Trigger: AAGTGGCCACTGCTTCTCCCATCTCTCTCCTGCCCA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGTACAGCTGCCCAGTaGACATACCTCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQCTAAQ*TYLSPQ
Trigger: CTGGGGAGAGAGGTATGTCCACTGGGCAGCTGTACA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTGCAGAGCTCAGAAATaGAGGTGGCTCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTCRAQK*RWLLCL
Trigger: AAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGGCTGGACTTGGAGCATaGGATGAAGAGATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWAGLGA*DEEMFR
Trigger: TCTGAACATCTCTTCATCCCATGCTCCAAGTCCAGC...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGGTGTGGCACTGTTCTaGCTTCAGTCTATCACCAGG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTGVALF*LQSITR
Trigger: CCTGGTGATAGACTGAAGCCAGAACAGTGCCACACC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGAAAATTAGCCAGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWKISQV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCTGGCTAATTTT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATACTCCAACTCTGAACTaGTTCAAGGTGAGAGACGTC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHTPTLN*FKVRDV
Trigger: GACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTTAATGCCATTGCTTTaGGGGTTAGGATTCAACATA +
Preference number: 4 (lower is better)
Translates to: ESSHPAAPACLNATVSGWLMPLL*GLGFNI
Trigger: TATGTTGAATCCTAACCCCCAAAGCAATGGCATTAA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGAGGAAAGTGGGAGCTaGCTGCGGATGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSEESGS*LRMQDK
Trigger: CTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCCTC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGAGGAAAGTGGGAGCTaGCTGCGGATGCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIEESGS*LRMQDK
Trigger: CTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCCTC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp GGTCCACTCCTGGTTCCAGGGTGCAGGTTGCTGGACTaGGAGCATGGGATGAAGAGATGTTCAGAGATAGAG +
Preference number: 4 (lower is better)
Translates to: GPLLVPGCRLLD*EHGMKRCSEIE
Trigger: CTCTATCTCTGAACATCTCTTCATCCCATGCTCCAAGTCCAGCAACCTGCACCCTGGAACCAGGAGTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp GAAAGAAGGTGGAGAGGGGCTAATATGCAGATACCATaGCTGCAGGTGGCTCTGCCCCTAAGCACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERRWRGANMQIP*LQVALPLSTEE
Trigger: CTCCTCAGTGCTTAGGGGCAGAGCCACCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCCACCTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCTGTGTCCTGCTCCTaGTGCCCGCTGGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSVSCS*CPLEVR
Trigger: TCTGACCTCCAGCGGGCATCAGGAGCAGGACACAGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCATGCACCAGGGGGCTTTaGGCTAGTTGGCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSCTRGL*ASWQLG
Trigger: TCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCA...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCAGCACGGGTTGAGTTaGTGGGCAATTTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGQHGLS*WAIWMV
Trigger: CACCATCCAAATTGCCCATCAACTCAACCCGTGCTG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGCACCACCAGGAGTGTaGCTACCAGCACCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWAPPGV*LPAPLS
Trigger: TGACAGGGGTGCTGGTAGTCACACTCCTGGTGGTGC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCAAGACCAGAAGTCTaGCATCTGCCAAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQARPEV*HLPKPH
Trigger: GTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGATGGTGACAGGTACCTaGAGTCCTAGTTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWMVTGT*SPSYSE
Trigger: TTCTGAGTAACTAGGACTTCAGGTACCTGTCACCAT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTTGAAGCTGGCATTTaGGAGGCCTTCAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILEAGI*EAFRLT
Trigger: TGTCAACCTGAAGGCCTCTCAAATGCCAGCTTCAAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTTCGGCCCCTCCTCTaGAGACAGGATCCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLRPLL*RQDPAL
Trigger: TAGCGCAGGATCCTGTCTTCAGAGGAGGGGCCGAAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGTGGGACTCAAGGCCTaGAGGACTCCATTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQVGLKA*RTPFLR
Trigger: TCTTAGGAATGGAGTCCTTCAGGCCTTGAGTCCCAC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTTAGACCAAGGACTCTaGACTCACTTTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLDQGL*THFPWR
Trigger: CCTCCAGGGAAAGTGAGTTCAGAGTCCTTGGTCTAA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCAGAGAGTTGGCAGGTaGCTCTGCCCCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWQRVGR*LCPTGA
Trigger: TGCTCCAGTGGGGCAGAGGCACCTGCCAACTCTCTG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGGCAATTTGGATGGTaGTGGATTGGTGAGCGCATT +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGQFGW*WIGERI
Trigger: AATGCGCTCACCAATCCAGCACCATCCAAATTGCCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCCCTATTCTCAGAGCTaGTGTCTAGCCAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIPYSQS*CLARLS
Trigger: GCTCAGCCTGGCTAGACAGCAGCTCTGAGAATAGGG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCCTCCAGGAGCTGGATaGTGGGGTTCTCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWPPGAG*WGSQPR
Trigger: ACGTGGCTGAGAACCCCAGCATCCAGCTCCTGGAGG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCCTGCCTGCCTCAATaGAACGGTCTCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSCLPQ*NGLRLG
Trigger: GCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTAGGCTGCCTGTGCTaGAGAGCTGCACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLGCLC*RAAPLT
Trigger: GGTCAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCGCTCGGCCCATGTTaGCTTTTTGAGATACTTTTT +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHALGPC*LFEILF
Trigger: AAAAAGTATCTCAAAAAGGCAACATGGGCCGAGCGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTCGGCTTCCCAAAATaGTGGGATTACAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLGFPK*WDYRHK
Trigger: CTTGTGCCTGTAATCCCAGCATTTTGGGAAGCCGAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGGGGTGCTATCAGCTaGTTAATGGAGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGGAIS*LMEHHG
Trigger: TCCATGATGCTCCATTAAGCAGCTGATAGCACCCCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGCTTCAGAGATACGGTaGCTTCTCACTGCATCCACA +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDASEIR*LLTAST
Trigger: TGTGGATGCAGTGAGAAGGCACCGTATCTCTGAAGC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATCCGCTCTGTCCCCATaGCAACAATCTCCAATCACA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISALSP*QQSPIT
Trigger: TGTGATTGGAGATTGTTGGCATGGGGACAGAGCGGA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGGCTTCCCTTCATTTTaGCTGCCCTGCCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIGFPSF*LPCHFL
Trigger: GAGGAAGTGGCAGGGCAGGCAAAATGAAGGGAAGCC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTGGAGAGAGGGCTCTaGCCCCATGAAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLERGL*PHEGWM
Trigger: CATCCACCCTTCATGGGGCCAGAGCCCTCTCTCCAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCACCATCTGGATTCCTTaGGATGGCTCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVITIWIP*DGSGAE
Trigger: CTCAGCCCCAGAGCCATCCCAAGGAATCCAGATGGT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGTGCTGACAGATGCTaGGTTGGCAGGCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQCADRC*VGRHFQ
Trigger: CTGAAAGTGCCTGCCAACCCAGCATCTGTCAGCACA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAACCTGGATTGCCAGTaGGGAAGGTCTGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSNLDCQ*GRSGAL
Trigger: CAGTGCTCCAGACCTTCCCCACTGGCAATCCAGGTT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATCTCCTCTGGAGGACATaGATGATAACCTGGATTGCC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNLLWRT*MITWIA
Trigger: GGCAATCCAGGTTATCATCCATGTCCTCCAGAGGAG...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATAGGAGGAAGCTCCTCTaGAGGACATGGATGATAACC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNRRKLL*RTWMIT
Trigger: GGTTATCATCCATGTCCTCCAGAGGAGCTTCCTCCT...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTCTGGGCCAGGCACTTaGCAAACACCTGTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSGPGT*QTPVGS
Trigger: TGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGTAGGGTCCACTCCTaGTTCCAGGGTGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGRVHS*FQGAGC
Trigger: GCAACCTGCACCCTGGAACCAGGAGTGGACCCTACC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTGACCTGCCCAGCATaGGTACCTAACTGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLTCPA*VPNWGL
Trigger: TAAACCCCAGTTAGGTACCCATGCTGGGCAGGTCAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAGCAGTGACAGCTCTTaGGCTTTGAGGGAAATGATT +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTASSDSS*ALREMI
Trigger: AATCATTTCCCTCAAAGCCCAAGAGCTGTCACTGCT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGAGCAGTGACAGCTCTTaGGCTTTGAGGGAAATGATT +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWSSDSS*ALREMI
Trigger: AATCATTTCCCTCAAAGCCCAAGAGCTGTCACTGCT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACATTAAGGCGAGGGTGTaGCACTGTTCTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDIKARV*HCSGFS
Trigger: ACTGAAGCCAGAACAGTGCCACACCCTCGCCTTAAT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTTGTCTCAAACTCCTaGCTTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLVSNS*LQGILP
Trigger: TGGGAGGATCCCTTGAAGCCAGGAGTTTGAGACAAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACACTTTCCCTGGAGGTaGGGGTGCTATCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSHFPWR*GCYQLL
Trigger: AAGCAGCTGATAGCACCCCCACCTCCAGGGAAAGTG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCCACCTCGCCCAGCCTaGGGCATTGAGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVPPRPA*GIEPGW
Trigger: CCAGCCAGGCTCAATGCCCCAGGCTGGGCGAGGTGG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTGATCTCAGACTCCTaGCTTCAAGTGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLISDS*LQVICP
Trigger: GGGGCAGATCACTTGAAGCCAGGAGTCTGAGATCAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGCTACAGTCAGCGTGTaGTTAGAAACATTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHATVSV*LETFLP
Trigger: TGGCAAGAATGTTTCTAACCACACGCTGACTGTAGC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGTCTCCTGAATCACTaGGATTACAGGCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSLLNH*DYRLGP
Trigger: TGGCCCCAGCCTGTAATCCCAGTGATTCAGGAGACT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGAGGCAGGACGGAGATaGAGGAAGCTGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWEAGRR*RKLVQP
Trigger: AGGCTGCACCAGCTTCCTCCATCTCCGTCCTGCCTC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGTGATTCAGATGGTGTaGGAATGGCACCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQVIQMV*EWHLGM
Trigger: CATCCCCAGGTGCCATTCCCACACCATCTGAATCAC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCTTCTCCAATTCCTTTaGATACGCCTCCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWLLQFL*IRLLQE
Trigger: TTCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp CCACAGAGGCCACAAAACCAAGAGGTGGATGCCTCATaGTTACTTCATGCTGTCTGGGAGCAAAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PQRPQNQEVDAS*LLHAVWEQREG
Trigger: GCCCTCTCTTTGCTCCCAGACAGCATGAAGTAACAATGAGGCATCCACCTCTTGGTTTTGTGGCCTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGCAAGACCAGAAGTCTaGCATCTGCCAAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSARPEV*HLPKPH
Trigger: GTGTGGCTTTGGCAGATGTCAGACTTCTGGTCTTGC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCCTAGGGCAGTGGAGTaGAAAAGCTGTAGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIPRAVE*KSCSSQ
Trigger: TTGGCTGCTACAGCTTTTTCACTCCACTGCCCTAGG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAGATCATTAGGTTGCTaGACTCCCCTAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSRSLGC*TPLGQW
Trigger: CCACTGCCCTAGGGGAGTTCAGCAACCTAATGATCT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGCGGGAGAATGGCCTaGACCCAGGAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVGGRMA*TQEVEV
Trigger: GACCTCCACCTCCTGGGTTCAGGCCATTCTCCCGCC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCCAAGTCACGGCTTTaGGCGGCATCATTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQAKSRL*AASFEK
Trigger: CTTTTCAAATGATGCCGCTCAAAGCCGTGACTTGGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGAGAGGCCTTCAGGTTaGCAACAGCAGCAACAAGTT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGERPSG*QQQQQV
Trigger: AACTTGTTGCTGCTGTTGTCAACCTGAAGGCCTCTC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCGTGGATCCCAAAGGTaGCCTCGGACTTATACTCAT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGRGSQR*PRTYTH
Trigger: ATGAGTATAAGTCCGAGGGCACCTTTGGGATCCACG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTCCTGCCTGCCTCAATaGAACGGTCTCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCSCLPQ*NGLRLG
Trigger: GCCCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCCTGCCGCTCCTGCCTaGCTCAATGCAACGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCPAAPA*LNATVS
Trigger: TGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGAAGCAGTGGCCACTTaGTCTGGGCCAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCEAVAT*SGPGTW
Trigger: CCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAAACCAAGAGGTGGATaGCTCATTGTTACTTCATGC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAKPRGG*LIVTSC
Trigger: GCATGAAGTAACAATGAGGCATCCACCTCTTGGTTT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGCTTCAGAGATACGGTaGCTTCTCACTGCATCCACA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGASEIR*LLTAST
Trigger: TGTGGATGCAGTGAGAAGGCACCGTATCTCTGAAGC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCCTGCCTTTGACCCCTaGCAAATACAAGCAATCATG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDPAFDP*QIQAIM
Trigger: CATGATTGCTTGTATTTGGCAGGGGTCAAAGGCAGG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGTTTGGATACGCCTCCTaGAAGAAGCCGATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGFGYAS*KKPISS
Trigger: GCTGGAAATCGGCTTCTTGCAGGAGGCGTATCCAAA...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCATCTCCTGGACAGGCATaGGGTAACTTGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSSPGQA*GNLAPS
Trigger: AGAAGGAGCCAAGTTACCCCATGCCTGTCCAGGAGA...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTGCTGCTCCCGTCAGTaGGGACTGTGCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCCCSRQ*GLCWQT
Trigger: TGTCTGCCAGCACAGTCCCCACTGACGGGAGCAGCA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCCAGGTGAGGGCCTGTaGCATGGCACCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVPGEGL*HGTSLS
Trigger: GGAGAGGGAGGTGCCATGCCACAGGCCCTCACCTGG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGAACTCAAGGCAGTTaGGCTCCTGGAGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGTQGS*APGEQP
Trigger: TGGCTGCTCTCCAGGAGCCCAACTGCCTTGAGTTCC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTGCCTTGTCCAGCAATaGTTCCCTGAAAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDCLVQQ*FPEKNP
Trigger: TGGGTTCTTTTCAGGGAACCATTGCTGGACAAGGCA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTGCAGAGCTCAGAAATaGAGGTGGCTCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVICRAQK*RWLLCL
Trigger: AAGGCACAGGAGCCACCTCCATTTCTGAGCTCTGCA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCAGGGTGTAGATCCCTaGAGGCTGACGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCQGVDP*RLTAWG
Trigger: ACCCCAAGCCGTCAGCCTCCAGGGATCTACACCCTG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCTGACCTGCCCAGCATaGGTACCTAACTGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILTCPA*VPNWGL
Trigger: TAAACCCCAGTTAGGTACCCATGCTGGGCAGGTCAG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTTGTCTCAAACTCCTaGCTTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLVSNS*LQGILP
Trigger: TGGGAGGATCCCTTGAAGCCAGGAGTTTGAGACAAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAAAATTAGCCAGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIKISQV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCTGGCTAATTTT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCACAAAACCAAGAGGTaGATGCCTCATTGTTACTTC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHHKTKR*MPHCYF
Trigger: GAAGTAACAATGAGGCATCCACCTCTTGGTTTTGTG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTCCATTCCTAAGAGATaGGAGCAGGAGACATGCTAC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNSIPKR*EQETCY
Trigger: GTAGCATGTCTCCTGCTCCCATCTCTTAGGAATGGA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATCCATTCCTAAGAGATaGGAGCAGGAGACATGCTAC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISIPKR*EQETCY
Trigger: GTAGCATGTCTCCTGCTCCCATCTCTTAGGAATGGA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCACAGTTCTAGAGGCTaGGAAGTCCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTHSSRG*EVQDQG
Trigger: ACCTTGATCTTGGACTTCCCAGCCTCTAGAACTGTG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGACATAGCTTTCTGTaGTGTACATACCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGHSFL*CTYPGV
Trigger: CACTCCTGGGTATGTACACCACAGAAAGCTATGTCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTGGTGGATGGACATTTaGGTTGTTTCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTWWMDI*VVSGLG
Trigger: CCCCAAACCTGAAACAACCCAAATGTCCATCCACCA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGGGGTGTAGGCAGCTaGAGGAAGTACTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGGVGS*RKYCVS
Trigger: GGACACACAGTACTTCCTCCAGCTGCCTACACCCCC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGACAGTTTACAGGTCCTaGAGGGTGAGGAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGTVYRS*RVRKVG
Trigger: TCCCACTTTCCTCACCCTCCAGGACCTGTAAACTGT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCCTCTCAGCAGGAAGTaGCGGTGGCTCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVPLSRK*RWLQWV
Trigger: GACCCACTGGAGCCACCGTCACTTCCTGCTGAGAGG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTACCACATACCTGCCCTaGGGCCTTCAGGGACCAATG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCTTYLP*GLQGPM
Trigger: CATTGGTCCCTGAAGGCCTCAGGGCAGGTATGTGGT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCAGCAATGGTTCCCTaGAAAGAACCCATAAGGATA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIPAMVP*KEPIRI
Trigger: TATCCTTATGGGTTCTTTTCAGGGAACCATTGCTGG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCCAGCAATGGTTCCCTaGAAAGAACCCATAAGGATA +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDPAMVP*KEPIRI
Trigger: TATCCTTATGGGTTCTTTTCAGGGAACCATTGCTGG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAATGGTGACAGGTACCTaGAGTCCTAGTTACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIMVTGT*SPSYSE
Trigger: TTCTGAGTAACTAGGACTTCAGGTACCTGTCACCAT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTTGAGCGGCATCATTTaGAAAGTGCTGGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILSGII*KVLGSA
Trigger: GGCTGATCCCAGCACTTTTCAAATGATGCCGCTCAA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTACTCCTGGCTTCAAGTaGTCTGCCCCCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCTPGFK*SAPCQH
Trigger: ATGCTGGCAGGGGGCAGATCACTTGAAGCCAGGAGT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCAGAGGGCTGAGGGCTaGCAGGTCAGAGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVQRAEG*QVRGGL
Trigger: GAGTCCTCCTCTGACCTGGCAGCCCTCAGCCCTCTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCAATTTGGATGGTaGTGGATTGGTGAGCGCATT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSGQFGW*WIGERI
Trigger: AATGCGCTCACCAATCCAGCACCATCCAAATTGCCC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCAAGGCATGTCCTGCTaGCAGGCCTGCAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCQGMSC*QACSPL
Trigger: TAAGGGACTGCAGGCCTGGCAGCAGGACATGCCTTG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGCCAAGGCATGTCCTaGTGCCAGGCCTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVSQGMS*CQACSP
Trigger: GGGACTGCAGGCCTGGCAGCAGGACATGCCTTGGCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGATGATAACCTGGATTaGCAGTGGGGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIDDNLD*QWGRSG
Trigger: TCCAGACCTTCCCCACTGGCAATCCAGGTTATCATC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTCCAGTGGTCCCTCCTaGTCCACCTGGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVSSGPS*STWANR
Trigger: CCTGTTGGCCCAGGTGGAGCAGGAGGGACCACTGGA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGCCTAGGCTGCCTGTaGTGCAGAGCTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVGLGCL*CRAAPL
Trigger: CAAGGGTGCAGCTCTGCAGCACAGGCAGCCTAGGCC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACGGAGTTTGAATCTTaGCTAGCACAGGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTEFES*LAQGFL
Trigger: CAGAAATCCCTGTGCTAGGCAAGATTCAAACTCCGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCATTGCCTAGGCTGAAGTaGAGTGGTGCCATCATAGCT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSLPRLK*SGAIIA
Trigger: AGCTATGATGGCACCACTGCACTTCAGCCTAGGCAA...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTTGCCTAGGCTGAAGTaGAGTGGTGCCATCATAGCT +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILPRLK*SGAIIA
Trigger: AGCTATGATGGCACCACTGCACTTCAGCCTAGGCAA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGCCACCCCTAATGCCTaGCCCCACTTCATATTCCAG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWATPNA*PHFIFQ
Trigger: CTGGAATATGAAGTGGGGGCAGGCATTAGGGGTGGC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACCTTGTGCCTTTCACTaGCTTTTACAGCATTTACAT +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAPCAFH*LLQHLH
Trigger: ATGTAAATGCTGTAAAAGGCAGTGAAAGGCACAAGG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCAGGGGGCCACCATCTaGATTCCTTGGGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCQGATI*IPWDGS
Trigger: AGAGCCATCCCAAGGAATCCAGATGGTGGCCCCCTG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGTCGCACCTGCTGTGTaGGTACTGCCCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCVAPAV*VLPSSV
Trigger: CACAGAACTGGGCAGTACCCACACAGCAGGTGCGAC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCAAGCGGCTTGCCCTaGGGGTGGAACGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTASGLP*GWNGPG
Trigger: CCCTGGCCCGTTCCACCCCCAGGGCAAGCCGCTTGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGATGATAGGCTCGGCCTaGTCACTCTCTGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWMIGSA*SLSAPC
Trigger: ACAGGGTGCAGAGAGTGACCAGGCCGAGCCTATCAT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCAATTTGGATGGTGCTaGATTGGTGAGCGCATTAGA +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTQFGWC*IGERIR
Trigger: TCTAATGCGCTCACCAATCCAGCACCATCCAAATTG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGTAGGCACTTTGGATaGCACCATGCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSRHFG*HHASTG
Trigger: ACCCGTGCTGGCATGGTGCCATCCAAAGTGCCTACT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCACTCCCCTAGGGCAGTaGAGTGAAAAAGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVITPLGQ*SEKAVA
Trigger: TGCTACAGCTTTTTCACTCCACTGCCCTAGGGGAGT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTGGGTGATGGGCTCATaGGGATTTGTTATTCTACTC +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNWVMGS*GFVILL
Trigger: GAGTAGAATAACAAATCCCCATGAGCCCATCACCCA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATACATGTGATAAGCTGTaGTTCACAGGCATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHTCDKL*FTGIKN
Trigger: GTTCTTTATGCCTGTGAACCACAGCTTATCACATGT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGCAGGTGGCAGATGTTaGCACACTGGGCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWAGGRC*HTGQRC
Trigger: ACATCTCTGCCCAGTGTGCCAACATCTGCCACCTGC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGACATTTGGGTTGGTaGATGGACATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGHLGW*MDIWVV
Trigger: AACAACCCAAATGTCCATCCACCAACCCAAATGTCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGACATTTGGGTTGGTaGATGGACATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGHLGW*MDIWVV
Trigger: AACAACCCAAATGTCCATCCACCAACCCAAATGTCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCAAACTTTGACCAAATaGCCTCTCTGCTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWQTLTK*PLCSCL
Trigger: TAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp GAACGAAGAATGTTTGTGGGTGTAGTAAGCAATGACTaGGAGCAGAGCCCTCTAGCCATTGGGCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: ERRMFVGVVSND*EQSPLAIGLTL
Trigger: GAGGGTGAGCCCAATGGCTAGAGGGCTCTGCTCCAAGTCATTGCTTACTACACCCACAAACATTCTTCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCATGCCAGCACGGGTTaGGTTGATGGGCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWHASTG*VDGQFG
Trigger: TCCAAATTGCCCATCAACTCAACCCGTGCTGGCATG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCRRRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCAGCTCACTGCAACCTCCGCCT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGAGAGATGTGTTGGTGTaGAAAACCTCTATGTACTTT +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWRDVLV*KTSMYF
Trigger: AAAGTACATAGAGGTTTTTCACACCAACACATCTCT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGATTATTCTGTGTCACTaGGGCCTATCACAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQIILCH*GLSQCS
Trigger: AGAGCACTGTGATAGGCCTCAGTGACACAGAATAAT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCTGACCTCTTTTGCTTaGCCTCATGTCTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLTSFA*PHVCEI
Trigger: AATTTCACAGACATGAGGTCAAGCAAAAGAGGTCAG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTGGCCAGAAACCCATaGCCAGCCTGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVLARNP*PAWEAK
Trigger: CTTGGCTTCCCAGGCTGGTCATGGGTTTCTGGCCAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCCCACCTCAGTCTCCTaGATCACTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCPTSVS*ITGITG
Trigger: GCCTGTAATCCCAGTGATTCAGGAGACTGAGGTGGG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGACAGGTCCTGGAGGGTaGGGAAAGTGGGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVTGPGG*GKWELA
Trigger: AGCCAGCTCCCACTTTCCTCACCCTCCAGGACCTGT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTTGCGAGGAAATCAGTaGTTCAGATGGTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLRGNQ*FRWCGN
Trigger: ATTCCCACACCATCTGAATCACTGATTTCCTCGCAA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTGCTGTGTGGGTACTaGCCAGTTCTGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLLCGY*PVLCPA
Trigger: AGCAGGACACAGAACTGGGCAGTACCCACACAGCAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGCGCTCGGCCCATGTTaGCTTTTTGAGATACTTTTT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGALGPC*LFEILF
Trigger: AAAAAGTATCTCAAAAAGGCAACATGGGCCGAGCGC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCATCAACCCTTTCTACATaGCTTACCCAGGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSSTLST*LTQGIS
Trigger: GGAGATACCCTGGGTAAGGCATGTAGAAAGGGTTGA...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAAAGAAAAGAACCTCTaGAGAATGAGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQKEKNL*RMRGSR
Trigger: CCTGCTTCCCCTCATTCTGCAGAGGTTCTTTTCTTT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAAAGAAAAGAACCTCTaGAGAATGAGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGKEKNL*RMRGSR
Trigger: CCTGCTTCCCCTCATTCTGCAGAGGTTCTTTTCTTT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTCATTGTTACTTCATaGTGTCTGGGAGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILIVTS*CLGAKR
Trigger: TCTCTTTGCTCCCAGACAGCATGAAGTAACAATGAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCTTGGTCTCCCAAAGTaGTGGGATTATAGGTATGAT +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLGLPK*WDYRYD
Trigger: ATCATACCTATAATCCCAGCACTTTGGGAGACCAAG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGCTTTTGGTAGATACTaGCAGTTTTCCAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQAFGRY*QFSNRV
Trigger: GACCCTGTTGGAAAACTGGCAGTATCTACCAAAAGC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCCCATGAAGGGTGGATaGACTGAGAGGAAACGAGAC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWPMKGG*TERKRD
Trigger: GTCTCGTTTCCTCTCAGTCCATCCACCCTTCATGGG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTTGCCCTCCAGGAGCTaGATGCTGGGGTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVLPSRS*MLGFSA
Trigger: GGCTGAGAACCCCAGCATCCAGCTCCTGGAGGGCAA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTAGGGAACCTGGCTGCTaGGAGTGGAAACGCCCTATA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCREPGC*EWKRPI
Trigger: TATAGGGCGTTTCCACTCCCAGCAGCCAGGTTCCCT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGTGTGGCACTGTTCTaGCTTCAGTCTATCACCAGG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGVALF*LQSITR
Trigger: CCTGGTGATAGACTGAAGCCAGAACAGTGCCACACC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACACAAAACCAAGAGGTaGATGCCTCATTGTTACTTC +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIHKTKR*MPHCYF
Trigger: GAAGTAACAATGAGGCATCCACCTCTTGGTTTTGTG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCACTCCAACTCTGAACTaGTTCAAGGTGAGAGACGTC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVITPTLN*FKVRDV
Trigger: GACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTTAATGGAGCATCATaGAAAATGTGGGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILNGAS*KMWDSR
Trigger: CCTTGAGTCCCACATTTTCCATGATGCTCCATTAAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTGGGCAGAGATGTGTTaGTGTGAAAAACCTCTATGT +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNWAEMC*CEKPLC
Trigger: ACATAGAGGTTTTTCACACCAACACATCTCTGCCCA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTGGGCAGAGATGTGTTaGTGTGAAAAACCTCTATGT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDWAEMC*CEKPLC
Trigger: ACATAGAGGTTTTTCACACCAACACATCTCTGCCCA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGCAGGTGGCAGATGTTaGCACACTGGGCAGAGATGT +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCAGGRC*HTGQRC
Trigger: ACATCTCTGCCCAGTGTGCCAACATCTGCCACCTGC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCAGGAGTGGAACTGCTaGATCAGTTTATACGTATGT +
Preference number: 4 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDQEWNC*ISLYVC
Trigger: ACATACGTATAAACTGATCCAGCAGTTCCACTCCTG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGTACATACCCAGGAGTaGAACTGCTGGATCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQVHTQE*NCWISL
Trigger: TAAACTGATCCAGCAGTTCCACTCCTGGGTATGTAC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATATTTGGGTTGGTGGATaGACATTTGGGTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSGHLLWARHLANTCRFNIWVGG*TFGLFQ
Trigger: CTGAAACAACCCAAATGTCCATCCACCAACCCAAAT...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATGGCTTCTAACACCATaGATCAGTTTTGCTTATTTC +
Preference number: 4 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAWLLTP*ISFAYF
Trigger: GAAATAAGCAAAACTGATCCATGGTGTTAGAAGCCA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTGGCTTCTAACACCATaGATCAGTTTTGCTTATTTC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWWLLTP*ISFAYF
Trigger: GAAATAAGCAAAACTGATCCATGGTGTTAGAAGCCA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAAATACAAGCAATCATaGCTGACTCCTTTGCAAACT +
Preference number: 4 (lower is better)
Translates to: GKWELAADAGQEPRASLHKYKQS*LTPLQT
Trigger: AGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTATGACAATAGACTCTaGCCAGAAACCCATGACCAG +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQYDNRL*PETHDQ
Trigger: CTGGTCATGGGTTTCTGGCCAGAGTCTATTGTCATA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGAGCCCTCTAGCCATTaGGCTCACCCTCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVEPSSH*AHPHRQ
Trigger: CTGCCTGTGAGGGTGAGCCCAATGGCTAGAGGGCTC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGTCTCCTGAATCACTaGGATTACAGGCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSLLNH*DYRLGP
Trigger: TGGCCCCAGCCTGTAATCCCAGTGATTCAGGAGACT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTTCTCCAATTCCTTTaGATACGCCTCCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLLQFL*IRLLQE
Trigger: TTCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp TGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTaGTTTCAGGTTTGGGGCTACAGTCAGCGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: WMDIWVGGWTFG*FQVWGYSQRVV
Trigger: AACCACACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp AACTGTGGATGGACATTTGGGTTGGTGGATGGACATTaGGGTTGTTTCAGGTTTGGGGCTACAGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NCGWTFGLVDGH*GCFRFGATVSV
Trigger: CACGCTGACTGTAGCCCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGATTAGCCAGGCATGGTaGCAGGTACCTGAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWISQAW*QVPEVL
Trigger: TAGGACTTCAGGTACCTGTCACCATGCCTGGCTAAT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGCCAAGTCACGGCTTTaGGCGGCATCATTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWAKSRL*AASFEK
Trigger: CTTTTCAAATGATGCCGCTCAAAGCCGTGACTTGGC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTCAACACAGGACTCCTaGGATCTGACACTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSTQDS*DLTLAN
Trigger: ATTGGCCAGTGTCAGATCTCAGGAGTCCTGTGTTGA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGGGGCCAGGTGTACTaGAGGAACGGAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVRGQVY*RNGTDG
Trigger: CCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTGGGGACAGAGATGCTaGTCTCAGGACTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCWGQRC*SQDLVQ
Trigger: CTGAACCAAGTCCTGAGAGCAGCATCTCTGTCCCCA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGATGATAACCTGGATTaGCAGTGGGGAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWDDNLD*QWGRSG
Trigger: TCCAGACCTTCCCCACTGGCAATCCAGGTTATCATC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCCTATCACAGTGCTCTaGACATGTAGGTGCAAATAT +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGPITVL*TCRCKY
Trigger: ATATTTGCACCTACATGTGCAGAGCACTGTGATAGG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTTATCCATGTTGCTGTaGATAGCGATATTTTCATTC +
Preference number: 4 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWLSMLL*IAIFSF
Trigger: GAATGAAAATATCGCTATGCACAGCAACATGGATAA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCTCTCCTGGGGACTCTaGCGCCTGGGTCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLSWGL*RLGLLD
Trigger: GTCCAGGAGACCCAGGCGCCAGAGTCCCCAGGAGAG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTGTATCCCAGCACTTTaGGAAGCCAACGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCCIPAL*EANAGG
Trigger: TCCACCTGCGTTGGCTTCCCAAAGTGCTGGGATACA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGGGCAAACTGCCACTaGACACACCCATCATTCATC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGANCH*THPSFI
Trigger: GATGAATGATGGGTGTGTCCAGTGGCAGTTTGCCCC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTTAATGGAGCATCATaGAAAATGTGGGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLNGAS*KMWDSR
Trigger: CCTTGAGTCCCACATTTTCCATGATGCTCCATTAAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCACCCCCTACTGTACTaGTGGGTGGTGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTHPLLY*WVVGGG
Trigger: GCCCCCTCCCACCACCCACCAGTACAGTAGGGGGTG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGATGGACATTTGGGTTaGTGGATGGACATTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSDGHLG*WMDIWV
Trigger: AACCCAAATGTCCATCCACCAACCCAAATGTCCATC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGCTCCAACAGGGAGTCTaGAAACAAACTGACAATACT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQLQQGV*KQTDNT
Trigger: AGTATTGTCAGTTTGTTTCCAGACTCCCTGTTGGAG...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGGGGGTGTAGGCAGCTaGAGGAAGTACTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVGGVGS*RKYCVS
Trigger: GGACACACAGTACTTCCTCCAGCTGCCTACACCCCC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAGCGAAGTGATTAACTaGAAGATAGCGTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQSEVIN*KIASDC
Trigger: GCAATCAGACGCTATCTTCCAGTTAATCACTTCGCT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCCTCTCAGCAGGAAGTaGCGGTGGCTCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTPLSRK*RWLQWV
Trigger: GACCCACTGGAGCCACCGTCACTTCCTGCTGAGAGG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTATTAGCCAGGCATGGTaGCAGGTACCTGAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCISQAW*QVPEVL
Trigger: TAGGACTTCAGGTACCTGTCACCATGCCTGGCTAAT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCGCAGGTGGAGCACTTaGGGTCAGGAGTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVRRWST*GQEFKN
Trigger: GTTCTTGAACTCCTGACCTCAAGTGCTCCACCTGCG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTACCTACACTGGTTTTaGACTCCTGGCCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCYLHWF*TPGLKQ
Trigger: CTGCTTGAGGCCAGGAGTTCAAAACCAGTGTAGGTA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCTGGAGGTCGCACCTaGTGTGTGGGTACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTAGGRT*CVGTAQ
Trigger: CTGGGCAGTACCCACACAGCAGGTGCGACCTCCAGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTCCAGTGGTCCCTCCTaGTCCACCTGGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSSGPS*STWANR
Trigger: CCTGTTGGCCCAGGTGGAGCAGGAGGGACCACTGGA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCAGAAGTCTGACATCTaGCAAAGCCACACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVQKSDI*QSHTAP
Trigger: CGGGGCTGTGTGGCTTTGGCAGATGTCAGACTTCTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGAGAGGGGCTAATATaGAGATACCATTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGEGLI*RYHCCR
Trigger: CCTGCAGCAATGGTATCTGCATATTAGCCCCTCTCC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCTTGGTCTCCCAAAGTaGTGGGATTATAGGTATGAT +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILGLPK*WDYRYD
Trigger: ATCATACCTATAATCCCAGCACTTTGGGAGACCAAG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCTCTGCACATGTAGGTaGAAATATCTGTTGTATGAT +
Preference number: 4 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLCTCR*KYLLYD
Trigger: ATCATACAACAGATATTTGCACCTACATGTGCAGAG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTCATTTTGCCTGCCCTaGCACTTCCTCCCGCCACTT +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVSFCLP*HFLPPL
Trigger: AAGTGGCGGGAGGAAGTGGCAGGGCAGGCAAAATGA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGACATGGATGATAACCTaGATTGCCAGTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWTWMIT*IASGEG
Trigger: ACCTTCCCCACTGGCAATCCAGGTTATCATCCATGT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTCCTCTGGAGGACATaGATGATAACCTGGATTGCC +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLLWRT*MITWIA
Trigger: GGCAATCCAGGTTATCATCCATGTCCTCCAGAGGAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTTACTTCATGCTGTCTaGGAGCAAAGAGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLLHAV*EQREGL
Trigger: AAGGCCCTCTCTTTGCTCCCAGACAGCATGAAGTAA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCCCCTACTGTACTGGTaGGTGGTGGGAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTPLLYW*VVGGGS
Trigger: TGAGCCCCCTCCCACCACCCACCAGTACAGTAGGGG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCAGCGAAGTGATTAACTaGAAGATAGCGTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVISEVIN*KIASDC
Trigger: GCAATCAGACGCTATCTTCCAGTTAATCACTTCGCT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGAGATCATTAGGTTGCTaGACTCCCCTAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVRSLGC*TPLGQW
Trigger: CCACTGCCCTAGGGGAGTTCAGCAACCTAATGATCT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTATTACTGAAGTTGGGTaGTGGGCTCATGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCITEVG*WAHGDL
Trigger: CAAATCCCCATGAGCCCATCACCCAACTTCAGTAAT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCACCTCCAAAGAGCTTaGCAACAGAGGAACCCGCTT +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVHLQRA*QQRNPL
Trigger: AAGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGTGGGACTCAAGGCCTaGAGGACTCCATTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVVGLKA*RTPFLR
Trigger: TCTTAGGAATGGAGTCCTTCAGGCCTTGAGTCCCAC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTTCAGCAAACGGCATTaGTGCTCAGATTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCFSKRH*CSDSGE
Trigger: CTCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTAGGGTCTTGCTTTGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCRVLLC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGGCAACAAAGCAAGACCCT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGCTTTTGGTAGATACTaGCAGTTTTCCAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWAFGRY*QFSNRV
Trigger: GACCCTGTTGGAAAACTGGCAGTATCTACCAAAAGC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACCTTGTGCCTTTCACTaGCTTTTACAGCATTTACAT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSPCAFH*LLQHLH
Trigger: ATGTAAATGCTGTAAAAGGCAGTGAAAGGCACAAGG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAAGATAGCGTCTGATTaGGAGGAAATCAGTGATTCA +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSKIASD*EEISDS
Trigger: TGAATCACTGATTTCCTCGCAATCAGACGCTATCTT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGATGGGCAATTTGGATaGTGCTGGATTGGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVDGQFG*CWIGER
Trigger: GCGCTCACCAATCCAGCACCATCCAAATTGCCCATC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGGGTATCTCCCATCATaGCTGGTTACTGTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWGYLPS*LVTVLK
Trigger: TTTTAGCACAGTAACCAGCCATGATGGGAGATACCC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGCGGGAGAAAGAAGGTaGAGAGGGGCTAATATGCAG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVAGERR*RGANMQ
Trigger: CTGCATATTAGCCCCTCTCCACCTTCTTTCTCCCGC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAAACCAGCTGTCAATTaGGTTGAGATGGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: EFESCLAQGFLPAGRALSKPAVN*VEMVSL
Trigger: AAGAGATACCATCTCAACCCAATTGACAGCTGGTTT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTGCTCTTGTTTAGGTaGTTTTTATTTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLLLFR*FLFPHL
Trigger: GAGATGTGGAAATAAAAACCACCTAAACAAGAGCAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGAAATACAAGCAATCATaGCTGACTCCTTTGCAAACT +
Preference number: 4 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQKYKQS*LTPLQT
Trigger: AGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp CTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTaGGTGGATGGACATTTGGGTTGTTTCAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LHCSFNCGWTFG*VDGHLGCFRFG
Trigger: CCCAAACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp ACCCCTGCCAAATACAAGCAATCATGGCTGACTCCTTaGCAAACTTTGACCAAATGGCCTCTCTGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TPAKYKQSWLTP*QTLTKWPLCSC
Trigger: ACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTTGGCAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGAACCCAGTGAAGAATaGGCCAGATACTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVEPSEE*ARYSLS
Trigger: GGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTGTTAGCAACAGAGTaGGGAATGCTAGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVLLATE*GMLGVT
Trigger: GGTCACTCCTAGCATTCCTCACTCTGTTGCTAACAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTTCCTTCCAAGAGACTaGACATACAACTGGACAATG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWFLPRD*TYNWTM
Trigger: CATTGTCCAGTTGTATGTTCAGTCTCTTGGAAGGAA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCTCTGCACATGTAGGTaGAAATATCTGTTGTATGAT +
Preference number: 4 (lower is better)
Translates to: TGSCATPTLNWFKVRDVILCTCR*KYLLYD
Trigger: ATCATACAACAGATATTTGCACCTACATGTGCAGAG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCAATTTGGATGGTGCTaGATTGGTGAGCGCATTAGA +
Preference number: 4 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCQFGWC*IGERIR
Trigger: TCTAATGCGCTCACCAATCCAGCACCATCCAAATTG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTAGCTGGGACTATAGATaGGCGCCGCCATGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSWDYR*APPCPV
Trigger: AACTGGGCATGGCGGCGCCCATCTATAGTCCCAGCT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp TGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTaGGGTTGGTGGATGGACATTTGGGTTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CDFTVASTVDGH*GWWMDIWVVSG
Trigger: ACCTGAAACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGCCTTCACCCCAAGGTaGAGTACGCTTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTAFTPR*STLSQV
Trigger: GACCTGAGAAAGCGTACTTCACCTTGGGGTGAAGGC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTTCAGCAAACGGCATTaGTGCTCAGATTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVFSKRH*CSDSGE
Trigger: CTCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCAATTTCAACACAGATaGATTAGACCAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWQFQHR*IRPRTL
Trigger: CAGAGTCCTTGGTCTAATGCATCTGTGTTGAAATTG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCCTGCCTTTGACCCCTaGCAAATACAAGCAATCATG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVPAFDP*QIQAIM
Trigger: CATGATTGCTTGTATTTGGCAGGGGTCAAAGGCAGG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTCATTTTGCCTGCCCTaGCACTTCCTCCCGCCACTT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSFCLP*HFLPPL
Trigger: AAGTGGCGGGAGGAAGTGGCAGGGCAGGCAAAATGA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAAGATAGCGTCTGATTaGGAGGAAATCAGTGATTCA +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWKIASD*EEISDS
Trigger: TGAATCACTGATTTCCTCGCAATCAGACGCTATCTT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTATGATAGGCTCGGCCTaGTCACTCTCTGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTMIGSA*SLSAPC
Trigger: ACAGGGTGCAGAGAGTGACCAGGCCGAGCCTATCAT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTAGTAGGCACTTTGGATaGCACCATGCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSRHFG*HHASTG
Trigger: ACCCGTGCTGGCATGGTGCCATCCAAAGTGCCTACT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCACTTTCCCTGGAGGTaGGGGTGCTATCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTHFPWR*GCYQLL
Trigger: AAGCAGCTGATAGCACCCCCACCTCCAGGGAAAGTG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTGGTGGATGGACATTTaGGTTGTTTCAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVWWMDI*VVSGLG
Trigger: CCCCAAACCTGAAACAACCCAAATGTCCATCCACCA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp TTCACCAATTACCAGTTTATCTCTTCTCCAATTCCTTaGGATACGCCTCCTGCAAGAAGCCGATTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FTNYQFISSPIP*DTPPARSRFPA
Trigger: AGCTGGAAATCGGCTTCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAGAGATAAACTGGTAATTGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCATTGCAAAAATTGCTaGAATTGCGGCAGATATACT +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWHCKNC*NCGRYT
Trigger: AGTATATCTGCCGCAATTTCAGCAATTTTTGCAATG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCCCTTCCTTGGGTTCTaGCCTCCACATTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTPFLGF*PPHYLA
Trigger: AGCCAGATAATGTGGAGGTCAGAACCCAAGGAAGGG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTAGCCTCCCGAGTGGCTaGAATTACAGATGTACGCCA +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSLPSG*NYRCTP
Trigger: TGGCGTACATCTGTAATTTCAGCCACTCGGGAGGCT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGACGGAGTTTGAATCTTaGCTAGCACAGGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVTEFES*LAQGFL
Trigger: CAGAAATCCCTGTGCTAGGCAAGATTCAAACTCCGT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTATTAGTCGGGTGTGGTaGCAGGCCTCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTISRVW*QASVIP
Trigger: TGGGATTACAGAGGCCTGCCACCACACCCGACTAAT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGCTACAGTCAGCGTGTaGTTAGAAACATTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVATVSV*LETFLP
Trigger: TGGCAAGAATGTTTCTAACCACACGCTGACTGTAGC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGCTGCTCTTGTTTAGGTaGTTTTTATTTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLLLFR*FLFPHL
Trigger: GAGATGTGGAAATAAAAACCACCTAAACAAGAGCAG...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp ATCCCTCCTAATCTTGCAAACCAGCTGTCAATTGGGTaGAGATGGTATCTCTTTCATAGGGTCATTATGAGG +
Preference number: 4 (lower is better)
Translates to: IPPNLANQLSIG*RWYLFHRVIMR
Trigger: CCTCATAATGACCCTATGAAAGAGATACCATCTCAACCCAATTGACAGCTGGTTTGCAAGATTAGGAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp AAATACAAGCAATCATGGCTGACTCCTTTGCAAACTTaGACCAAATGGCCTCTCTGCTCTTGTTTAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KYKQSWLTPLQT*TKWPLCSCLGG
Trigger: ACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGAGTCAGCCATGATTGCTTGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGAACCCAGTGAAGAATaGGCCAGATACTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTEPSEE*ARYSLS
Trigger: GGACAGTGAGTATCTGGCTCATTCTTCACTGGGTTC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCTGTTAGCAACAGAGTaGGGAATGCTAGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLLATE*GMLGVT
Trigger: GGTCACTCCTAGCATTCCTCACTCTGTTGCTAACAG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTGGCCAATTCACACCCTaGTTGAAGCTGGCATTTGAG +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTGQFTP*LKLAFE
Trigger: CTCAAATGCCAGCTTCAAGCAGGGTGTGAATTGGCC...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTTATCCATGTTGCTGTaGATAGCGATATTTTCATTC +
Preference number: 4 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWLSMLL*IAIFSF
Trigger: GAATGAAAATATCGCTATGCACAGCAACATGGATAA...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTATTAAGGCGAGGGTGTaGCACTGTTCTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTIKARV*HCSGFS
Trigger: ACTGAAGCCAGAACAGTGCCACACCCTCGCCTTAAT...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp TCCTTTGCAAACTTTGACCAAATGGCCTCTCTGCTCTaGTTTAGGTGGTTTTTATTTCCACATCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: SFANFDQMASLL*FRWFLFPHLQQ
Trigger: CTGTTGGAGATGTGGAAATAAAAACCACCTAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTGCAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCAATTTCAACACAGATaGATTAGACCAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVQFQHR*IRPRTL
Trigger: CAGAGTCCTTGGTCTAATGCATCTGTGTTGAAATTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTTACTTCATGCTGTCTaGGAGCAAAGAGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLLHAV*EQREGL
Trigger: AAGGCCCTCTCTTTGCTCCCAGACAGCATGAAGTAA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CCA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCAAACTTTGACCAAATaGCCTCTCTGCTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: INWKIASDCEEISDSDGVQTLTK*PLCSCL
Trigger: TAAACAAGAGCAGAGAGGCCATTTGGTCAAAGTTTG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCTGACCTCTTTTGCTTaGCCTCATGTCTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTLTSFA*PHVCEI
Trigger: AATTTCACAGACATGAGGTCAAGCAAAAGAGGTCAG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR TCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTTCCTTCCAAGAGACTaGACATACAACTGGACAATG +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTFLPRD*TYNWTM
Trigger: CATTGTCCAGTTGTATGTTCAGTCTCTTGGAAGGAA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR GCA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCCTATCACAGTGCTCTaGACATGTAGGTGCAAATAT +
Preference number: 4 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTPITVL*TCRCKY
Trigger: ATATTTGCACCTACATGTGCAGAGCACTGTGATAGG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
3UTR CAA 72 bp CAACACTTAATAGTGATAATAACATATATCCAACCCTaGGTAAATGCCAGGACTCATCCTAAGACCTACATC +
Preference number: 4 (lower is better)
Translates to: QHLIVIITYIQP*VNARTHPKTYI
Trigger: GATGTAGGTCTTAGGATGAGTCCTGGCATTTACCAAGGGTTGGATATATGTTATTATCACTATTAAGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp GGCATGGCACCTCCCTCTCCTGGAACTTCCGGTCGGCTTGTGGCCTaGGGCCGCCATCCGGGTCCGCAGGTGGCCCAGGGTTGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GMAPPSPGTSGRLVA*GRHPGPQVAQGCPP
Trigger: TGGAGGGCAACCCTGGGCCACCTGCGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCCATGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp CCTGTGGCATGGCACCTCCCTCTCCTGGAACTTCCGGTCGGCTTGTaGCCTGGGGCCGCCATCCGGGTCCGCAGGTGGCCCAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: PVAWHLPLLELPVGL*PGAAIRVRRWPRVA
Trigger: GGCAACCCTGGGCCACCTGCGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCCATGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp CCGCCATCCGGGTCCGCAGGTGGCCCAGGGTTGCCCTCCAGGAGCTaGATGCTGGGGTTCTCAGCCACGTGGATCCCAAAGGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PPSGSAGGPGLPSRS*MLGFSATWIPKVPS
Trigger: CGAGGGCACCTTTGGGATCCACGTGGCTGAGAACCCCAGCATCCAGCTCCTGGAGGGCAACCCTGGGCCACCTGCGGACCCGGATGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGGAACTTCCGGTCGGCTaGTGGCCTGGGGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPELPVG*WPGAAI
Trigger: GATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTC...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 90 bp CGCCAGGCTTACTCAGCTCCGACCCAAGGCCCCTATTCTCAGAGCTaGTGTCTAGCCAGGCTGAGCTGCCTCCAGTGGCGCCGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: RQAYSAPTQGPYSQS*CLARLSCLQWRRRV
Trigger: CACCCGCCGGCGCCACTGGAGGCAGCTCAGCCTGGCTAGACAGCAGCTCTGAGAATAGGGGCCTTGGGTCGGAGCTGAGTAAGCCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 90 bp CATCCGGGTCCGCAGGTGGCCCAGGGTTGCCCTCCAGGAGCTGGATaGTGGGGTTCTCAGCCACGTGGATCCCAAAGGTGCCCTCGGACT +
Preference number: 5 (lower is better)
Translates to: HPGPQVAQGCPPGAG*WGSQPRGSQRCPRT
Trigger: AGTCCGAGGGCACCTTTGGGATCCACGTGGCTGAGAACCCCAGCATCCAGCTCCTGGAGGGCAACCCTGGGCCACCTGCGGACCCGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp TCTCTCTGCAGCTGTTGTAGGGGATGCTGTGGGCCGCAGCAGGTGTaGGGGGCCCTGGCCTCTCAGCAGGAAGTGACGGTGGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SLCSCCRGCCGPQQV*GALASQQEVTVAPV
Trigger: CACTGGAGCCACCGTCACTTCCTGCTGAGAGGCCAGGGCCCCCCACACCTGCTGCGGCCCACAGCATCCCCTACAACAGCTGCAGAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp GCTGAGGGCTGCCAGGTCAGAGGAGGACTCCAGGGGGCCACCATCTaGATTCCTTGGGATGGCTCTGGGGCTGAGCGTCTGCAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AEGCQVRGGLQGATI*IPWDGSGAERLQGL
Trigger: CAAGCCCTGCAGACGCTCAGCCCCAGAGCCATCCCAAGGAATCCAGATGGTGGCCCCCTGGAGTCCTCCTCTGACCTGGCAGCCCTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp GGCCAGGGGCTGGAAGGAGACAGATGGAGACACAGGCCCACGGGATaGTGTGAGGCTGGAGGTCGCACCTGCTGTGTGGGTACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GQGLEGDRWRHRPTG*CEAGGRTCCVGTAQ
Trigger: CTGGGCAGTACCCACACAGCAGGTGCGACCTCCAGCCTCACACCATCCCGTGGGCCTGTGTCTCCATCTGTCTCCTTCCAGCCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGATGGGAGGCAGGTCTaGTGGAGTCGCCCACACACC +
Preference number: 5 (lower is better)
Translates to: ESSHPAAPACLNATVSGWDGRQV*WSRPHT
Trigger: GGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 90 bp GGCTTCACTAGTGCAGACGCCGCCGGTACAGCACCACCAGGAGTGTaGCTACCAGCACCCCTGTCACAGCCACCTGGAGCCACAGAGCCC +
Preference number: 5 (lower is better)
Translates to: GFTSADAAGTAPPGV*LPAPLSQPPGATEP
Trigger: GGGCTCTGTGGCTCCAGGTGGCTGTGACAGGGGTGCTGGTAGTCACACTCCTGGTGGTGCTGTACCGGCGGCGTCTGCACTAGTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp AGGGGCTTCGGAGAGGGGCCAGGTGTACTGCAGGAACGGAACAGATaGGTGGTGGGAAGAGCCCAGGGCTTCACTAGTGCAGACGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGFGEGPGVLQERNR*VVGRAQGFTSADAA
Trigger: GGCGGCGTCTGCACTAGTGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCTCTCCGAAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 90 bp CCCCTCAGTGCCGCAATGAAGTACTCCACCCAGCCGGGCCGCCGCTaGAGGGTATTGAAGAGATGCCAGAGGGTGTCCCGGTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PLSAAMKYSTQPGRR*RVLKRCQRVSRFPE
Trigger: CTCAGGGAACCGGGACACCCTCTGGCATCTCTTCAATACCCTTCAGCGGCGGCCCGGCTGGGTGGAGTACTTCATTGCGGCACTGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS GCA 90 bp CCTGGGTCTCCTGGACAGGCATGGGGTAACTTGGCTCCTTCTCTCTaGAGCTGTTGTAGGGGATGCTGTGGGCCGCAGCAGGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PGSPGQAWGNLAPSL*SCCRGCCGPQQVWG
Trigger: CCCCCACACCTGCTGCGGCCCACAGCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAAGTTACCCCATGCCTGTCCAGGAGACCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 90 bp CTCTGCCCCACTGGAGCAGATGATAGGCTCGGCCTGGTCACTCTCTaGACCCTGTTTACCCTCTGCAGCCCCTGCAGAGGCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LCPTGADDRLGLVTL*TLFTLCSPCRGQAR
Trigger: CCTGGCTTGGCCTCTGCAGGGGCTGCAGAGGGTAAACAGGGTGCAGAGAGTGACCAGGCCGAGCCTATCATCTGCTCCAGTGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp CTGATGGCAAGATCCTCGAAGCAGCCCGAGAACGGGCTGTCTACCTaGGATGCCAGCACGCCAGGCTTACTCAGCTCCGACCCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: LMARSSKQPENGLST*DASTPGLLSSDPRP
Trigger: GGGCCTTGGGTCGGAGCTGAGTAAGCCTGGCGTGCTGGCATCCCAGGTAGACAGCCCGTTCTCGGGCTGCTTCGAGGATCTTGCCATCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp TCGGAGAGGGGCCAGGTGTACTGCAGGAACGGAACAGATGGGTGGTaGGAAGAGCCCAGGGCTTCACTAGTGCAGACGCCGCCGGTACAG +
Preference number: 5 (lower is better)
Translates to: SERGQVYCRNGTDGW*EEPRASLVQTPPVQ
Trigger: CTGTACCGGCGGCGTCTGCACTAGTGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCTCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp GCTTCGGAGAGGGGCCAGGTGTACTGCAGGAACGGAACAGATGGGTaGTGGGAAGAGCCCAGGGCTTCACTAGTGCAGACGCCGCCGGTA +
Preference number: 5 (lower is better)
Translates to: ASERGQVYCRNGTDG*WEEPRASLVQTPPV
Trigger: TACCGGCGGCGTCTGCACTAGTGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCTCTCCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 90 bp GGCAAGATCCTCGAAGCAGCCCGAGAACGGGCTGTCTACCTGGGATaGCAGCACGCCAGGCTTACTCAGCTCCGACCCAAGGCCCCTATT +
Preference number: 5 (lower is better)
Translates to: GKILEAARERAVYLG*QHARLTQLRPKAPI
Trigger: AATAGGGGCCTTGGGTCGGAGCTGAGTAAGCCTGGCGTGCTGGCATCCCAGGTAGACAGCCCGTTCTCGGGCTGCTTCGAGGATCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp TTGGCAGGTGCCTCTGCCCCACTGGAGCAGATGATAGGCTCGGCCTaGTCACTCTCTGCACCCTGTTTACCCTCTGCAGCCCCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LAGASAPLEQMIGSA*SLSAPCLPSAAPAE
Trigger: CTCTGCAGGGGCTGCAGAGGGTAAACAGGGTGCAGAGAGTGACCAGGCCGAGCCTATCATCTGCTCCAGTGGGGCAGAGGCACCTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGAAGCAGTGGCCACTaGCTCTGGGCCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTRSSGH*LWARHL
Trigger: CAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 90 bp CAAGGTGGTAGGCACTTTGGAGGGCAGAGAGTTGGCAGGTGCCTCTaGCCCACTGGAGCAGATGATAGGCTCGGCCTGGTCACTCTCTGC +
Preference number: 5 (lower is better)
Translates to: QGGRHFGGQRVGRCL*PTGADDRLGLVTLC
Trigger: GCAGAGAGTGACCAGGCCGAGCCTATCATCTGCTCCAGTGGGGCAGAGGCACCTGCCAACTCTCTGCCCTCCAAAGTGCCTACCACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 90 bp CCAGGAGCTGGATGCTGGGGTTCTCAGCCACGTGGATCCCAAAGGTaGCCTCGGACTTATACTCATTCTCCTCTGGGCCATGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PGAGCWGSQPRGSQR*PRTYTHSPLGHGRA
Trigger: GGCCCTGCCATGGCCCAGAGGAGAATGAGTATAAGTCCGAGGGCACCTTTGGGATCCACGTGGCTGAGAACCCCAGCATCCAGCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGATGGGAGGCAGGTCTaGTGGAGTCGCCCACACACC +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHDGRQV*WSRPHT
Trigger: GGTGTGTGGGCGACTCCACAAGACCTGCCTCCCATC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGAATATGCAGATACCATaGCTGCAGGTGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: ESSHPAAPACLNATVSGWNMQIP*LQVALP
Trigger: GGGCAGAGCCACCTGCAGCAATGGTATCTGCATATT...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGGACAGCTCTTGGGCTTaGAGGGAAATGATTCAGCGG +
Preference number: 5 (lower is better)
Translates to: ESSHPAAPACLNATVSGWDSSWA*REMIQR
Trigger: CCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTGTC...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTAGCAGGTGGCAGATGTaGGCACACTGGGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSRWQM*AHWAEM
Trigger: CATCTCTGCCCAGTGTGCCAACATCTGCCACCTGCT...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCATGGCGCCGGCGGGTGTaGGAGCTGCTGGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSWRRRV*ELLGSP
Trigger: AGGAGACCCCAGCAGCTCCAACACCCGCCGGCGCCA...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGGAACTTCCGGTCGGCTaGTGGCCTGGGGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: FESCLAQGFLPAGRALSGELPVG*WPGAAI
Trigger: GATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTC...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACTGGTGAGAGGCAGGTaGGGACGCAGGCCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: GSTVCPPFQRWWPLSESILVRGR*GRRPRL
Trigger: CAGCCTAGGCCTGCGTCCCAACCTGCCTCTCACCAG...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 90 bp AAACGGCATTGCTGCTCAGATTCTGGAGAGAGGGCTCTGGCCCCATaGAGGGTGGATGGACTGAGAGGAAACGAGACTCGGGTACCCCCG +
Preference number: 5 (lower is better)
Translates to: KRHCCSDSGERALAP*RVDGLRGNETRVPP
Trigger: CGGGGGTACCCGAGTCTCGTTTCCTCTCAGTCCATCCACCCTTCATGGGGCCAGAGCCCTCTCTCCAGAATCTGAGCAGCAATGCCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp AATTCTCTCCTGGGGACTCTGGCGCCTGGGTCTCCTGGACAGGCATaGGGTAACTTGGCTCCTTCTCTCTGCAGCTGTTGTAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: NSLLGTLAPGSPGQA*GNLAPSLCSCCRGC
Trigger: GCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAAGTTACCCCATGCCTGTCCAGGAGACCCAGGCGCCAGAGTCCCCAGGAGAGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp ATCCCAAAGGTGCCCTCGGACTTATACTCATTCTCCTCTGGGCCATaGCAGGGCCCCATGCCCAAGGAGGTGCTGGCACTGATGGCAAGA +
Preference number: 5 (lower is better)
Translates to: IPKVPSDLYSFSSGP*QGPMPKEVLALMAR
Trigger: TCTTGCCATCAGTGCCAGCACCTCCTTGGGCATGGGGCCCTGCCATGGCCCAGAGGAGAATGAGTATAAGTCCGAGGGCACCTTTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGAGCAGCCACCCTGCCGCTCCTGCCTGCCTCAATGCAACGGTCTCAGGCTGGTTTGAGCGGCATCATTaGAAAAGTGCTGGGATCAGC +
Preference number: 5 (lower is better)
Translates to: ESSHPAAPACLNATVSGWFERHH*KSAGIS
Trigger: GCTGATCCCAGCACTTTTCAAATGATGCCGCTCAAA...CCAGCCTGAGACCGTTGCATTGAGGCAGGCAGGAGCGGCAGGGTGGCTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGACAGCTCTTGGGCTTaGAGGGAAATGATTCAGCGG +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTDSSWA*REMIQR
Trigger: CCGCTGAATCATTTCCCTCAAAGCCCAAGAGCTGTC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAGTGCTGGCAGACACCTaGGTGAGCACCATGCTAGTA +
Preference number: 5 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAVLADT*VSTMLV
Trigger: TACTAGCATGGTGCTCACCAAGGTGTCTGCCAGCAC...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCATGCTGCTCTCAGGACTaGGTTCAGCCAAGGCATGTC +
Preference number: 5 (lower is better)
Translates to: SSVQGGLSASEIRCLLTACCSQD*VQPRHV
Trigger: GACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGCA...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTGCAGTGAGCCGAAGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDCSEPK*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACTTCGGCTCACTGCA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAAGCAGGAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHKQENH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCTT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTCATCGGGTGGGGTCTTaGCCGTATTATTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTHRVGS*PYYSVS
Trigger: TGACACAGAATAATACGGCAAAGACCCCACCCGATG...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 90 bp TGCTGGATTGGTGAGCGCATTAGAAGGCACTGCACCAGGGGGCTTTaGGCTAGTTGGCAACTTGGAGGGCACTGTGCTGACAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: CWIGERIRRHCTRGL*ASWQLGGHCADRCW
Trigger: CCAGCATCTGTCAGCACAGTGCCCTCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCAGTGCCTTCTAATGCGCTCACCAATCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATTTGGATGGTGCTGGATaGGTGAGCGCATTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHLDGAG*VSALEG
Trigger: GCCTTCTAATGCGCTCACCAATCCAGCACCATCCAA...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGTTGGATGGTGCTGGATaGGTGAGCGCATTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWLDGAG*VSALEG
Trigger: GCCTTCTAATGCGCTCACCAATCCAGCACCATCCAA...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATCCAGCACGGGTTGAGTaGATGGGCAATTTGGATGGT +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHPARVE*MGNLDG
Trigger: ACCATCCAAATTGCCCATCAACTCAACCCGTGCTGG...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATATGCTAGTAGGCACTTaGGATGGCACCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHMLVGT*DGTMPA
Trigger: TGCTGGCATGGTGCCATCCAAAGTGCCTACTAGCAT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCCTCTGGGCCAGGCACTaGGCAAACACCTGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLWARH*ANTCRF
Trigger: GAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAG...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTCTGGGCCAGGCACTaGGCAAACACCTGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLWARH*ANTCRF
Trigger: GAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGAAGCAGTGGCCACTaGCTCTGGGCCAGGCACTTG +
Preference number: 5 (lower is better)
Translates to: FESCLAQGFLPAGRALSGRSSGH*LWARHL
Trigger: CAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCTTCT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTGTACCTGTGCATAAATaGTTAACTGACCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTVPVHK*LTDLPS
Trigger: GCTGGGCAGGTCAGTTAACAATTTATGCACAGGTAC...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCACTAACATTCTACCACTaGGGCAACAGTCTTCGGGGC +
Preference number: 5 (lower is better)
Translates to: SSVQGGLSASEIRCLLTALTFYH*GNSLRG
Trigger: GCCCCGAAGACTGTTGCCCAAGTGGTAGAATGTTAG...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTTTGAGCGGCATCATTaGAAAAGTGCTGGGATCAGC +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTFERHH*KSAGIS
Trigger: GCTGATCCCAGCACTTTTCAAATGATGCCGCTCAAA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGTGCAGTGAGCCGAAGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQCSEPK*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACTTCGGCTCACTGCA...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACCCGCATCTGCCCCTaGGCTTTCTCAACCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTRICP*AFSTLH
Trigger: GTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGTCCACATTGCAAAAATaGCTGAAATTGCGGCAGATA +
Preference number: 5 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPSTLQK*LKLRQI
Trigger: TATCTGCCGCAATTTCAGCAATTTTTGCAATGTGGA...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATGAGTTGATGGGCAATTaGGATGGTGCTGGATTGGTG +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHELMGN*DGAGLV
Trigger: CACCAATCCAGCACCATCCAAATTGCCCATCAACTC...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAAGTGGGAGCTGGCTGCGGATGCAGGACAAGAACCCAGGGCTTCCCTTCATAGACAGATAAATCCCTaGCCCAAGGTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GKWELAADAGQEPRASLHRQINP*PKVTEL
Trigger: CAGCTCTGTGACCTTGGGCAAGGGATTTATCTGTCT...ATGAAGGGAAGCCCTGGGTTCTTGTCCTGCATCCGCAGCCAGCTCCCACTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TCCAGTGTCCAGGGCGGGCTCTCTGCTTCAGAGATACGGTGCCTTCTCACTGCAAAAAAGTGGTGGGGTTaGGGTGCAGTGTCTCACATC +
Preference number: 5 (lower is better)
Translates to: SSVQGGLSASEIRCLLTAKKWWG*GAVSHI
Trigger: GATGTGAGACACTGCACCCAAACCCCACCACTTTTT...TGCAGTGAGAAGGCACCGTATCTCTGAAGCAGAGAGCCCGCCCTGGACACTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCTGTATCCCAGCACTTaGGGAAGCCAACGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FESCLAQGFLPAGRALSGLYPST*GSQRRW
Trigger: CCACCTGCGTTGGCTTCCCAAAGTGCTGGGATACAG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCCTACTGTACTGGTGGGTGGTGGGAGGGGGCTCATCGGGTGGGGTCTTTGCCGCAAGATGGCCATGAATaGATAATTACTGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: PYCTGGWWEGAHRVGSLPQDGHE*IITEVG
Trigger: CCCAACTTCAGTAATTATCAATTCATGGCCATCTTG...CGGCAAAGACCCCACCCGATGAGCCCCCTCCCACCACCCACCAGTACAGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAAGCAGGAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDKQENH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCTT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATGCACCTCCAAAGAGCTaGACAACAGAGGAACCCGCT +
Preference number: 5 (lower is better)
Translates to: SSGHLLWARHLANTCRFNAPPKS*TTEEPA
Trigger: AGCGGGTTCCTCTGTTGTCAAGCTCTTTGGAGGTGC...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGAGCAGGTGGCAGATGTaGGCACACTGGGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: FESCLAQGFLPAGRALSGSRWQM*AHWAEM
Trigger: CATCTCTGCCCAGTGTGCCAACATCTGCCACCTGCT...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGCCCAGCCTGGGGCATaGAGCCTGGCTGGGCACACA +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCAQPGA*SLAGHT
Trigger: TGTGTGCCCAGCCAGGCTCAATGCCCCAGGCTGGGC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTGGGGTTTCACCATGTaGGCCAGGCTGATCTCAGAC +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTWGFTM*ARLISD
Trigger: GTCTGAGATCAGCCTGGCCAACATGGTGAAACCCCA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAAGTCCCTGCCTGCCTTaGACCCCTGCCAAATACAAG +
Preference number: 5 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISPCLP*TPAKYK
Trigger: CTTGTATTTGGCAGGGGTCAAAGGCAGGCAGGGACT...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGATAGAGATCATTAGGTaGCTGAACTCCCCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWIEIIR*LNSPRA
Trigger: TGCCCTAGGGGAGTTCAGCAACCTAATGATCTCTAT...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAACCCGCATCTGCCCCTaGGCTTTCTCAACCCTTCAC +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSTRICP*AFSTLH
Trigger: GTGAAGGGTTGAGAAAGCCAAGGGGCAGATGCGGGT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CTCCTGGCGGGCTCAAGTGACTTATCTTCCCACCTCAGCCTCCCATGTAGCTGGCACCTCTTAATGCCATaGCTTTGGGGGTTAGGATTC +
Preference number: 5 (lower is better)
Translates to: LLAGSSDLSSHLSLPCSWHLLMP*LWGLGF
Trigger: GAATCCTAACCCCCAAAGCAATGGCATTAAGAGGTG...CCAGCTACATGGGAGGCTGAGGTGGGAAGATAAGTCACTTGAGCCCGCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGTAGTAAGCAATGACTaGGAGCAGAGCCCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIVVSND*EQSPLA
Trigger: GGCTAGAGGGCTCTGCTCCAAGTCATTGCTTACTAC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 90 bp CACCATGCTAGTAGGCACTTTGGATGGCACCATGCCAGCACGGGTTaGGTTGATGGGCAATTTGGATGGTGCTGGATTGGTGAGCGCATT +
Preference number: 5 (lower is better)
Translates to: HHASRHFGWHHASTG*VDGQFGWCWIGERI
Trigger: AATGCGCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCATGGTGCCATCCAAAGTGCCTACTAGCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 90 bp ACTTATAGGTCTTGTCTTCAGCAAACGGCATTGCTGCTCAGATTCTaGAGAGAGGGCTCTGGCCCCATGAAGGGTGGATGGACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: TYRSCLQQTALLLRF*REGSGPMKGGWTER
Trigger: CCTCTCAGTCCATCCACCCTTCATGGGGCCAGAGCCCTCTCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAAGACAAGACCTATAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACCTTCAGCAAACGGCATaGCTGCTCAGATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDLQQTA*LLRFWR
Trigger: TCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAAG...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGGACGGGGACCCACACAAGGCACCGTGGGGACAGAGATGCTGCTCTCAGGACTTCCACATTGCAAAAATaGCTGAAATTGCGGCAGATA +
Preference number: 5 (lower is better)
Translates to: RTGTHTRHRGDRDAALRTSTLQK*LKLRQI
Trigger: TATCTGCCGCAATTTCAGCAATTTTTGCAATGTGGA...AGTCCTGAGAGCAGCATCTCTGTCCCCACGGTGCCTTGTGTGGGTCCCCGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGAGCTAGTTGGCAACTaGGAGGGCACTGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIELVGN*EGTVLT
Trigger: TGTCAGCACAGTGCCCTCCAAGTTGCCAACTAGCTC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCGAGTTGATGGGCAATTaGGATGGTGCTGGATTGGTG +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTELMGN*DGAGLV
Trigger: CACCAATCCAGCACCATCCAAATTGCCCATCAACTC...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGTTCCAGGGTGCAGGTaGCTGGACTTGGAGCATGGG +
Preference number: 5 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWVPGCR*LDLEHG
Trigger: CCCATGCTCCAAGTCCAGCAACCTGCACCCTGGAAC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACAAAAAGTGGTGGGGTTaGGGTGCAGTGTCTCACATC +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDKKWWG*GAVSHI
Trigger: GATGTGAGACACTGCACCCAAACCCCACCACTTTTT...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGAGTTTTCCCTCGCATaGTCCCCTGGGTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSEFSLA*SPGSFI
Trigger: GATGAAGGACCCAGGGGACAATGCGAGGGAAAACTC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGGCCCAGCCTGGGGCATaGAGCCTGGCTGGGCACACA +
Preference number: 5 (lower is better)
Translates to: INWKIASDCEEISDSDGVAQPGA*SLAGHT
Trigger: TGTGTGCCCAGCCAGGCTCAATGCCCCAGGCTGGGC...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATAACGTCCCCAACCACTaGAAGGCACTCATAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SSGHLLWARHLANTCRFNNVPNH*KALIVS
Trigger: AGACACTATGAGTGCCTTCAAGTGGTTGGGGACGTT...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATAGGATGGACATTTGGGTaGGTGGATGGACATTTGGGT +
Preference number: 5 (lower is better)
Translates to: GSTVCPPFQRWWPLSESIGWTFG*VDGHLG
Trigger: ACCCAAATGTCCATCCACCAACCCAAATGTCCATCC...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACGGATGGACATTTGGGTaGGTGGATGGACATTTGGGT +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDGWTFG*VDGHLG
Trigger: ACCCAAATGTCCATCCACCAACCCAAATGTCCATCC...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACCAGCACGGGTTGAGTaGATGGGCAATTTGGATGGT +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSPARVE*MGNLDG
Trigger: ACCATCCAAATTGCCCATCAACTCAACCCGTGCTGG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTGGTGAGAGGCAGGTaGGGACGCAGGCCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: INWKIASDCEEISDSDGVLVRGR*GRRPRL
Trigger: CAGCCTAGGCCTGCGTCCCAACCTGCCTCTCACCAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCATAGAGATCATTAGGTaGCTGAACTCCCCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTIEIIR*LNSPRA
Trigger: TGCCCTAGGGGAGTTCAGCAACCTAATGATCTCTAT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGTTCCAGGGTGCAGGTaGCTGGACTTGGAGCATGGG +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCVPGCR*LDLEHG
Trigger: CCCATGCTCCAAGTCCAGCAACCTGCACCCTGGAAC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACTAACATTCTACCACTaGGGCAACAGTCTTCGGGGC +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSLTFYH*GNSLRG
Trigger: GCCCCGAAGACTGTTGCCCAAGTGGTAGAATGTTAG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATTTACCTACACTGGTTTaGAACTCCTGGCCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSGHLLWARHLANTCRFNLPTLV*NSWPQA
Trigger: TGCTTGAGGCCAGGAGTTCAAAACCAGTGTAGGTAA...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCTTACCTACACTGGTTTaGAACTCCTGGCCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTLPTLV*NSWPQA
Trigger: TGCTTGAGGCCAGGAGTTCAAAACCAGTGTAGGTAA...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCGTAGTAAGCAATGACTaGGAGCAGAGCCCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIVVSND*EQSPLA
Trigger: GGCTAGAGGGCTCTGCTCCAAGTCATTGCTTACTAC...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAAGTACTGTGTGTCCCCCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATATCTTCTCCAATTCCTTaGGATACGCCTCCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: GSTVCPPFQRWWPLSESISSPIP*DTPPAR
Trigger: TCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAGA...TATTGACTCTGAGAGGGGCCACCATCGCTGGAATGGGGGACACACAGTACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGTGCTGGCAGACACCTaGGTGAGCACCATGCTAGTA +
Preference number: 5 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWVLADT*VSTMLV
Trigger: TACTAGCATGGTGCTCACCAAGGTGTCTGCCAGCAC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAGACAGATAAATCCCTaGCCCAAGGTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSRQINP*PKVTEL
Trigger: CAGCTCTGTGACCTTGGGCAAGGGATTTATCTGTCT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCTGTATCCCAGCACTTaGGGAAGCCAACGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCLYPST*GSQRRW
Trigger: CCACCTGCGTTGGCTTCCCAAAGTGCTGGGATACAG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACAGCAGCAACAAGTTaGCTGTTCAAAGTAGGCCAA +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTAATS*LFKVGQ
Trigger: TTGGCCTACTTTGAACAGCAAACTTGTTGCTGCTGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGAGGTGGATGCCTCATaGTTACTTCATGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSEVDAS*LLHAVW
Trigger: CCAGACAGCATGAAGTAACAATGAGGCATCCACCTC...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp CCATTCCAGCGATGGTGGCCCCTCTCAGAGTCAATACCCTTCCTTCCAAGAGACTCATCCCTCCTAATCTaGCAAACCAGCTGTCAATTG +
Preference number: 5 (lower is better)
Translates to: PFQRWWPLSESIPFLPRDSSLLI*QTSCQL
Trigger: CAATTGACAGCTGGTTTGCAAGATTAGGAGGGATGA...GTCTCTTGGAAGGAAGGGTATTGACTCTGAGAGGGGCCACCATCGCTGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGAGTTTTCCCTCGCATaGTCCCCTGGGTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWEFSLA*SPGSFI
Trigger: GATGAAGGACCCAGGGGACAATGCGAGGGAAAACTC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAAACGTCCCCAACCACTaGAAGGCACTCATAGTGTCT +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSNVPNH*KALIVS
Trigger: AGACACTATGAGTGCCTTCAAGTGGTTGGGGACGTT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGAGTCCCTGCCTGCCTTaGACCCCTGCCAAATACAAG +
Preference number: 5 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWSPCLP*TPAKYK
Trigger: CTTGTATTTGGCAGGGGTCAAAGGCAGGCAGGGACT...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GGAGTGGAAACGCCCTATATCCTCCATCCTGTACAGCTGCCCAGTGGACATACCACATATATCCAACCCTaGGTAAATGCCAGGACTCAT +
Preference number: 5 (lower is better)
Translates to: GVETPYILHPVQLPSGHTTYIQP*VNARTH
Trigger: ATGAGTCCTGGCATTTACCAAGGGTTGGATATATGT...GGTATGTCCACTGGGCAGCTGTACAGGATGGAGGATATAGGGCGTTTCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCTCTAGTTCTTGTCCCTaGCAGAGCTCAGAAATGGAG +
Preference number: 5 (lower is better)
Translates to: TGSCATPTLNWFKVRDVISSSCP*QSSEME
Trigger: CTCCATTTCTGAGCTCTGCAAGGGACAAGAACTAGA...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGGAAGCTATTAATAGTTaGAGGCCAGGCAGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQEAINS*RPGRVK
Trigger: CTTTACCCTGCCTGGCCTCAAACTATTAATAGCTTC...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCCACCTCTTAATGCCATaGCTTTGGGGGTTAGGATTC +
Preference number: 5 (lower is better)
Translates to: TGSCATPTLNWFKVRDVIHLLMP*LWGLGF
Trigger: GAATCCTAACCCCCAAAGCAATGGCATTAAGAGGTG...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ACAGGATCCTGCGCTACTCCAACTCTGAACTGGTTCAAGGTGAGAGACGTCATCACAGCAGCAACAAGTTaGCTGTTCAAAGTAGGCCAA +
Preference number: 5 (lower is better)
Translates to: TGSCATPTLNWFKVRDVITAATS*LFKVGQ
Trigger: TTGGCCTACTTTGAACAGCAAACTTGTTGCTGCTGT...GATGACGTCTCTCACCTTGAACCAGTTCAGAGTTGGAGTAGCGCAGGATCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTAATATGCAGATACCATaGCTGCAGGTGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCNMQIP*LQVALP
Trigger: GGGCAGAGCCACCTGCAGCAATGGTATCTGCATATT...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAACATATATCCAACCCTaGGTAAATGCCAGGACTCAT +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSTYIQP*VNARTH
Trigger: ATGAGTCCTGGCATTTACCAAGGGTTGGATATATGT...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTCGACCCTGTGACTTCACTGTAGCTTCAACTGTGGATGGACATTTGGGTTGGGTACCTGTGCATAAATaGTTAACTGACCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: IRPCDFTVASTVDGHLGWVPVHK*LTDLPS
Trigger: GCTGGGCAGGTCAGTTAACAATTTATGCACAGGTAC...CCAACCCAAATGTCCATCCACAGTTGAAGCTACAGTGAAGTCACAGGGTCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGCAGTGGCCACTTGCTCTGGGCCAGGCACTTGGCAAACACCTGTAGGTTCAATCAACCTCCCTCATATTaGACTAAGAAGTCTCATAAA +
Preference number: 5 (lower is better)
Translates to: SSGHLLWARHLANTCRFNQPPSY*TKKSHK
Trigger: TTTATGAGACTTCTTAGTCAAATATGAGGGAGGTTG...ATTGAACCTACAGGTGTTTGCCAAGTGCCTGGCCCAGAGCAAGTGGCCACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGAGGTGGATGCCTCATaGTTACTTCATGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCEVDAS*LLHAVW
Trigger: CCAGACAGCATGAAGTAACAATGAGGCATCCACCTC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTGGGGTTTCACCATGTaGGCCAGGCTGATCTCAGAC +
Preference number: 5 (lower is better)
Translates to: INWKIASDCEEISDSDGVWGFTM*ARLISD
Trigger: GTCTGAGATCAGCCTGGCCAACATGGTGAAACCCCA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTGGATGGACATTTGGGTaGTTTCAGGTTTGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCGWTFG*FQVWGY
Trigger: GTAGCCCCAAACCTGAAACAACCCAAATGTCCATCC...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGATGGCCTCTCTGCTCTaGTTTAGGTGGTTTTTATTT +
Preference number: 5 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQMASLL*FRWFLF
Trigger: AAATAAAAACCACCTAAACAAGAGCAGAGAGGCCAT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp AGTTCTAGAGGCTGGGAAGTCCAAGATCAAGGTGCCAGCAGATCCAGTGTCCAGATAATAGCAGATTTATaGTACAGAAGTGTCCACGGG +
Preference number: 5 (lower is better)
Translates to: SSRGWEVQDQGASRSSVQIIADL*YRSVHG
Trigger: CCCGTGGACACTTCTGTACAATAAATCTGCTATTAT...CTGGACACTGGATCTGCTGGCACCTTGATCTTGGACTTCCCAGCCTCTAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGTGCAGGTTGCTGGACTaGGAGCATGGGATGAAGAGA +
Preference number: 5 (lower is better)
Translates to: INWKIASDCEEISDSDGVCRLLD*EHGMKR
Trigger: TCTCTTCATCCCATGCTCCAAGTCCAGCAACCTGCA...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCAGGGCAACCTCCCTCATATTaGACTAAGAAGTCTCATAAA +
Preference number: 5 (lower is better)
Translates to: FESCLAQGFLPAGRALSGQPPSY*TKKSHK
Trigger: TTTATGAGACTTCTTAGTCAAATATGAGGGAGGTTG...CCCTGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp GAGTTTGAATCTTGCCTAGCACAGGGATTTCTGCCTGCTGGAAGGGCTCTGTCACAAGATGGCCATGAATaGATAATTACTGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: EFESCLAQGFLPAGRALSQDGHE*IITEVG
Trigger: CCCAACTTCAGTAATTATCAATTCATGGCCATCTTG...TGACAGAGCCCTTCCAGCAGGCAGAAATCCCTGTGCTAGGCAAGATTCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTTCTTCTCCAATTCCTTaGGATACGCCTCCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCSSPIP*DTPPAR
Trigger: TCTTGCAGGAGGCGTATCCAAAGGAATTGGAGAAGA...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGCTTCAGCAAACGGCATaGCTGCTCAGATTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: INWKIASDCEEISDSDGVLQQTA*LLRFWR
Trigger: TCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAAG...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTGCTGCTCTCAGGACTaGGTTCAGCCAAGGCATGTC +
Preference number: 5 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTCCSQD*VQPRHV
Trigger: GACATGCCTTGGCTGAACCAAGTCCTGAGAGCAGCA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TGTAGCTTCAACTGTGGATGGACATTTGGGTTGGTGGATGGACATTTGGGTTGTCACTTCAGTAAAAAGTaGTGGTTTTGGCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: CSFNCGWTFGLVDGHLGCHFSKK*WFWLVF
Trigger: AAAAACCAGCCAAAACCACAACTTTTTACTGAAGTG...ACAACCCAAATGTCCATCCACCAACCCAAATGTCCATCCACAGTTGAAGCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 90 bp GCAGGTAAGGCAGAATCTCTACAACATCCACATTGCAAAAATTGCTaGAATTGCGGCAGATATACTTATAGGTCTTGTCTTCAGCAAACG +
Preference number: 5 (lower is better)
Translates to: AGKAESLQHPHCKNC*NCGRYTYRSCLQQT
Trigger: CGTTTGCTGAAGACAAGACCTATAAGTATATCTGCCGCAATTTCAGCAATTTTTGCAATGTGGATGTTGTAGAGATTCTGCCTTACCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTTCTAGTTCTTGTCCCTaGCAGAGCTCAGAAATGGAG +
Preference number: 5 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTSSSCP*QSSEME
Trigger: CTCCATTTCTGAGCTCTGCAAGGGACAAGAACTAGA...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp ATTAACTGGAAGATAGCGTCTGATTGCGAGGAAATCAGTGATTCAGATGGTGTGATGGCCTCTCTGCTCTaGTTTAGGTGGTTTTTATTT +
Preference number: 5 (lower is better)
Translates to: INWKIASDCEEISDSDGVMASLL*FRWFLF
Trigger: AAATAAAAACCACCTAAACAAGAGCAGAGAGGCCAT...CACACCATCTGAATCACTGATTTCCTCGCAATCAGACGCTATCTTCCAGTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS-3UTR CAA 90 bp TTACATATTGAGTGTTATAGTACTATTATAGCAGGTGGCAGATGTTGGCACACTCACTTCAGTAAAAAGTaGTGGTTTTGGCTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LHIECYSTIIAGGRCWHTHFSKK*WFWLVF
Trigger: AAAAACCAGCCAAAACCACAACTTTTTACTGAAGTG...AGTGTGCCAACATCTGCCACCTGCTATAATAGTACTATAACACTCAATATGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp CCTCCCTCTCCTGGAACTTCCGGTCGGCTTGTGGCCTaGGGCCGCCATCCGGGTCCGCAGGTGGCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PPSPGTSGRLVA*GRHPGPQVAQG
Trigger: ACCCTGGGCCACCTGCGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp TGGCACCTCCCTCTCCTGGAACTTCCGGTCGGCTTGTaGCCTGGGGCCGCCATCCGGGTCCGCAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: WHLPLLELPVGL*PGAAIRVRRWP
Trigger: GGGCCACCTGCGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp GGGCCTGTGGCATGGCACCTCCCTCTCCTGGAACTTCCGGTCGGCTaGTGGCCTGGGGCCGCCATCCGGGTCCGCAGGTGGCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: GPVAWHLPLLELPVG*WPGAAIRVRRWPRV
Trigger: AACCCTGGGCCACCTGCGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCCATGCCACAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp GCATGGCACCTCCCTCTCCTGGAACTTCCGGTCGGCTaGTGGCCTGGGGCCGCCATCCGGGTCCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: AWHLPLLELPVG*WPGAAIRVRRW
Trigger: CCACCTGCGGACCCGGATGGCGGCCCCAGGCCACAAGCCGACCGGAAGTTCCAGGAGAGGGAGGTGCCATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp CAGAGCTGCTGTCTAGCCAGGCTGAGCTGCCTCCAGTaGCGCCGGCGGGTGTTGGAGCTGCTGGGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: QSCCLARLSCLQ*RRRVLELLGSP
Trigger: AGGAGACCCCAGCAGCTCCAACACCCGCCGGCGCCACTGGAGGCAGCTCAGCCTGGCTAGACAGCAGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp GGGTCCGCAGGTGGCCCAGGGTTGCCCTCCAGGAGCTaGATGCTGGGGTTCTCAGCCACGTGGATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: GSAGGPGLPSRS*MLGFSATWIPK
Trigger: CTTTGGGATCCACGTGGCTGAGAACCCCAGCATCCAGCTCCTGGAGGGCAACCCTGGGCCACCTGCGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp AGTGCAGACGCCGCCGGTACAGCACCACCAGGAGTGTaGCTACCAGCACCCCTGTCACAGCCACCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: SADAAGTAPPGV*LPAPLSQPPGA
Trigger: GGCTCCAGGTGGCTGTGACAGGGGTGCTGGTAGTCACACTCCTGGTGGTGCTGTACCGGCGGCGTCTGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp GCCGCAATGAAGTACTCCACCCAGCCGGGCCGCCGCTaGAGGGTATTGAAGAGATGCCAGAGGGTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: AAMKYSTQPGRR*RVLKRCQRVSR
Trigger: CCGGGACACCCTCTGGCATCTCTTCAATACCCTTCAGCGGCGGCCCGGCTGGGTGGAGTACTTCATTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS GCA 72 bp CTCGAAGCAGCCCGAGAACGGGCTGTCTACCTGGGATaGCAGCACGCCAGGCTTACTCAGCTCCGACCCAAG +
Preference number: 6 (lower is better)
Translates to: LEAARERAVYLG*QHARLTQLRPK
Trigger: CTTGGGTCGGAGCTGAGTAAGCCTGGCGTGCTGGCATCCCAGGTAGACAGCCCGTTCTCGGGCTGCTTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp AGAGGAGGACTCCAGGGGGCCACCATCTGGATTCCTTaGGATGGCTCTGGGGCTGAGCGTCTGCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: RGGLQGATIWIP*DGSGAERLQGL
Trigger: CAAGCCCTGCAGACGCTCAGCCCCAGAGCCATCCCAAGGAATCCAGATGGTGGCCCCCTGGAGTCCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp AGGCACTTTGGAGGGCAGAGAGTTGGCAGGTGCCTCTaGCCCACTGGAGCAGATGATAGGCTCGGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RHFGGQRVGRCL*PTGADDRLGLV
Trigger: GACCAGGCCGAGCCTATCATCTGCTCCAGTGGGGCAGAGGCACCTGCCAACTCTCTGCCCTCCAAAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp TACTCAGCTCCGACCCAAGGCCCCTATTCTCAGAGCTaGTGTCTAGCCAGGCTGAGCTGCCTCCAGTGGCGC +
Preference number: 6 (lower is better)
Translates to: YSAPTQGPYSQS*CLARLSCLQWR
Trigger: GCGCCACTGGAGGCAGCTCAGCCTGGCTAGACAGCAGCTCTGAGAATAGGGGCCTTGGGTCGGAGCTGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp AGAGATGCCAGAGGGTGTCCCGGTTCCCTGAGAGTGTaGAGGTGGCCCGCAGTCGATCCTGGTCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RDARGCPGSLRV*RWPAVDPGLLL
Trigger: CAGCAAGAGACCAGGATCGACTGCGGGCCACCTGCACACTCTCAGGGAACCGGGACACCCTCTGGCATCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS CCA 72 bp TTCTGGAGAGAGGGCTCTGGCCCCATGAAGGGTGGATaGACTGAGAGGAAACGAGACTCGGGTACCCCCGGC +
Preference number: 6 (lower is better)
Translates to: FWREGSGPMKGG*TERKRDSGTPG
Trigger: GCCGGGGGTACCCGAGTCTCGTTTCCTCTCAGTCCATCCACCCTTCATGGGGCCAGAGCCCTCTCTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp AGATCCTCGAAGCAGCCCGAGAACGGGCTGTCTACCTaGGATGCCAGCACGCCAGGCTTACTCAGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: RSSKQPENGLST*DASTPGLLSSD
Trigger: GTCGGAGCTGAGTAAGCCTGGCGTGCTGGCATCCCAGGTAGACAGCCCGTTCTCGGGCTGCTTCGAGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp GTGCCCTCGGACTTATACTCATTCTCCTCTGGGCCATaGCAGGGCCCCATGCCCAAGGAGGTGCTGGCACTG +
Preference number: 6 (lower is better)
Translates to: VPSDLYSFSSGP*QGPMPKEVLAL
Trigger: CAGTGCCAGCACCTCCTTGGGCATGGGGCCCTGCCATGGCCCAGAGGAGAATGAGTATAAGTCCGAGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp GGCCAGGTGTACTGCAGGAACGGAACAGATGGGTGGTaGGAAGAGCCCAGGGCTTCACTAGTGCAGACGCCG +
Preference number: 6 (lower is better)
Translates to: GQVYCRNGTDGW*EEPRASLVQTP
Trigger: CGGCGTCTGCACTAGTGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTGCAGTACACCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp GGTATTGAAGAGATGCCAGAGGGTGTCCCGGTTCCCTaGGAGTGTGCAGGTGGCCCGCAGTCGATCCTGGTC +
Preference number: 6 (lower is better)
Translates to: GIEEMPEGVPVP*ECAGGPQSILV
Trigger: GACCAGGATCGACTGCGGGCCACCTGCACACTCTCAGGGAACCGGGACACCCTCTGGCATCTCTTCAATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428216.4
CDS GCA 72 bp CCTGGACAGGCATGGGGTAACTTGGCTCCTTCTCTCTaGAGCTGTTGTAGGGGATGCTGTGGGCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PGQAWGNLAPSL*SCCRGCCGPQQ
Trigger: CTGCTGCGGCCCACAGCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAAGTTACCCCATGCCTGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp ACTGGAGCAGATGATAGGCTCGGCCTGGTCACTCTCTaGACCCTGTTTACCCTCTGCAGCCCCTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: TGADDRLGLVTL*TLFTLCSPCRG
Trigger: GCCTCTGCAGGGGCTGCAGAGGGTAAACAGGGTGCAGAGAGTGACCAGGCCGAGCCTATCATCTGCTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp GGAGAGGGGCCAGGTGTACTGCAGGAACGGAACAGATaGGTGGTGGGAAGAGCCCAGGGCTTCACTAGTGCA +
Preference number: 6 (lower is better)
Translates to: GEGPGVLQERNR*VVGRAQGFTSA
Trigger: TGCACTAGTGAAGCCCTGGGCTCTTCCCACCACCCATCTGTTCCGTTCCTGCAGTACACCTGGCCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp CTGGCGCCTGGGTCTCCTGGACAGGCATGGGGTAACTaGGCTCCTTCTCTCTGCAGCTGTTGTAGGGGATGC +
Preference number: 6 (lower is better)
Translates to: LAPGSPGQAWGN*APSLCSCCRGC
Trigger: GCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAAGTTACCCCATGCCTGTCCAGGAGACCCAGGCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp TGGCGCCTGGGTCTCCTGGACAGGCATGGGGTAACTTaGCTCCTTCTCTCTGCAGCTGTTGTAGGGGATGCT +
Preference number: 6 (lower is better)
Translates to: WRLGLLDRHGVT*LLLSAAVVGDA
Trigger: AGCATCCCCTACAACAGCTGCAGAGAGAAGGAGCCAAGTTACCCCATGCCTGTCCAGGAGACCCAGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp GGCACTGCACCAGGGGGCTTTGAGCTAGTTGGCAACTaGGAGGGCACTGTGCTGACAGATGCTGGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: GTAPGGFELVGN*EGTVLTDAGLA
Trigger: TGCCAACCCAGCATCTGTCAGCACAGTGCCCTCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp CTGCTCCCGTCAGTGGGGACTGTGCTGGCAGACACCTaGGTGAGCACCATGCTAGTAGGCACTTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: LLPSVGTVLADT*VSTMLVGTLDG
Trigger: GCCATCCAAAGTGCCTACTAGCATGGTGCTCACCAAGGTGTCTGCCAGCACAGTCCCCACTGACGGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp TGCTGCTCAGATTCTGGAGAGAGGGCTCTGGCCCCATaGAGGGTGGATGGACTGAGAGGAAACGAGACTCGG +
Preference number: 6 (lower is better)
Translates to: CCSDSGERALAP*RVDGLRGNETR
Trigger: CCGAGTCTCGTTTCCTCTCAGTCCATCCACCCTTCATGGGGCCAGAGCCCTCTCTCCAGAATCTGAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp GGTGAGCGCATTAGAAGGCACTGCACCAGGGGGCTTTaGGCTAGTTGGCAACTTGGAGGGCACTGTGCTGAC +
Preference number: 6 (lower is better)
Translates to: GERIRRHCTRGL*ASWQLGGHCAD
Trigger: GTCAGCACAGTGCCCTCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCAGTGCCTTCTAATGCGCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp TCTGGATTCCTTGGGATGGCTCTGGGGCTGAGCGTCTaGAGGGCTTGCTCTGAATTCTCTCCTGGGGACTCT +
Preference number: 6 (lower is better)
Translates to: SGFLGMALGLSV*RACSEFSPGDS
Trigger: AGAGTCCCCAGGAGAGAATTCAGAGCAAGCCCTGCAGACGCTCAGCCCCAGAGCCATCCCAAGGAATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp GAGCTAGTTGGCAACTTGGAGGGCACTGTGCTGACAGATGCTGGGTaGGCAGGCACTTTCAGGGCCACTGTGTTCACAGGCATCAAGGTG +
Preference number: 6 (lower is better)
Translates to: ELVGNLEGTVLTDAG*AGTFRATVFTGIKV
Trigger: CACCTTGATGCCTGTGAACACAGTGGCCCTGAAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTGCCCTCCAAGTTGCCAACTAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp GCATTAGAAGGCACTGCACCAGGGGGCTTTGAGCTAGTTGGCAACTaGGAGGGCACTGTGCTGACAGATGCTGGGTTGGCAGGCACTTTC +
Preference number: 6 (lower is better)
Translates to: ALEGTAPGGFELVGN*EGTVLTDAGLAGTF
Trigger: GAAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTGCCCTCCAAGTTGCCAACTAGCTCAAAGCCCCCTGGTGCAGTGCCTTCTAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp TCATTTCTGCTGCTCCCGTCAGTGGGGACTGTGCTGGCAGACACCTaGGTGAGCACCATGCTAGTAGGCACTTTGGATGGCACCATGCCA +
Preference number: 6 (lower is better)
Translates to: SFLLLPSVGTVLADT*VSTMLVGTLDGTMP
Trigger: TGGCATGGTGCCATCCAAAGTGCCTACTAGCATGGTGCTCACCAAGGTGTCTGCCAGCACAGTCCCCACTGACGGGAGCAGCAGAAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp GCTAGTTGGCAACTTGGAGGGCACTGTGCTGACAGATaGTGGGTTGGCAGGCACTTTCAGGGCCACTGTGTT +
Preference number: 6 (lower is better)
Translates to: ASWQLGGHCADR*WVGRHFQGHCV
Trigger: AACACAGTGGCCCTGAAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTGCCCTCCAAGTTGCCAACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp GGATGCTGGGGTTCTCAGCCACGTGGATCCCAAAGGTaGCCTCGGACTTATACTCATTCTCCTCTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: GCWGSQPRGSQR*PRTYTHSPLGH
Trigger: ATGGCCCAGAGGAGAATGAGTATAAGTCCGAGGGCACCTTTGGGATCCACGTGGCTGAGAACCCCAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CCA 72 bp AGTTGGCAACTTGGAGGGCACTGTGCTGACAGATGCTaGGTTGGCAGGCACTTTCAGGGCCACTGTGTTCAC +
Preference number: 6 (lower is better)
Translates to: SWQLGGHCADRC*VGRHFQGHCVH
Trigger: GTGAACACAGTGGCCCTGAAAGTGCCTGCCAACCCAGCATCTGTCAGCACAGTGCCCTCCAAGTTGCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp CGGGTTGAGTTGATGGGCAATTTGGATGGTGCTGGATaGGTGAGCGCATTAGAAGGCACTGCACCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: RVELMGNLDGAG*VSALEGTAPGG
Trigger: GCCCCCTGGTGCAGTGCCTTCTAATGCGCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp GGCACCATGCCAGCACGGGTTGAGTTGATGGGCAATTaGGATGGTGCTGGATTGGTGAGCGCATTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: GTMPARVELMGN*DGAGLVSALEG
Trigger: GCCTTCTAATGCGCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCATGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 72 bp GGCACTTTGGATGGCACCATGCCAGCACGGGTTGAGTaGATGGGCAATTTGGATGGTGCTGGATTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: GTLDGTMPARVE*MGNLDGAGLVS
Trigger: GCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCATGGTGCCATCCAAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp ATGCCAGCACGGGTTGAGTTGATGGGCAATTTGGATGGTGCTGGATaGGTGAGCGCATTAGAAGGCACTGCACCAGGGGGCTTTGAGCTA +
Preference number: 6 (lower is better)
Translates to: MPARVELMGNLDGAG*VSALEGTAPGGFEL
Trigger: TAGCTCAAAGCCCCCTGGTGCAGTGCCTTCTAATGCGCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp ACTTTGGATGGCACCATGCCAGCACGGGTTGAGTTGATGGGCAATTaGGATGGTGCTGGATTGGTGAGCGCATTAGAAGGCACTGCACCA +
Preference number: 6 (lower is better)
Translates to: TLDGTMPARVELMGN*DGAGLVSALEGTAP
Trigger: TGGTGCAGTGCCTTCTAATGCGCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCATGGTGCCATCCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp AGTAGGCACTTTGGATGGCACCATGCCAGCACGGGTTaGGTTGATGGGCAATTTGGATGGTGCTGGATTGGT +
Preference number: 6 (lower is better)
Translates to: SRHFGWHHASTG*VDGQFGWCWIG
Trigger: ACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCATGGTGCCATCCAAAGTGCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp ATGCTAGTAGGCACTTTGGATGGCACCATGCCAGCACGGGTTGAGTaGATGGGCAATTTGGATGGTGCTGGATTGGTGAGCGCATTAGAA +
Preference number: 6 (lower is better)
Translates to: MLVGTLDGTMPARVE*MGNLDGAGLVSALE
Trigger: TTCTAATGCGCTCACCAATCCAGCACCATCCAAATTGCCCATCAACTCAACCCGTGCTGGCATGGTGCCATCCAAAGTGCCTACTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS CAA 90 bp AATTGCGGCAGATATACTTATAGGTCTTGTCTTCAGCAAACGGCATaGCTGCTCAGATTCTGGAGAGAGGGCTCTGGCCCCATGAAGGGT +
Preference number: 6 (lower is better)
Translates to: NCGRYTYRSCLQQTA*LLRFWREGSGPMKG
Trigger: ACCCTTCATGGGGCCAGAGCCCTCTCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAAGACAAGACCTATAAGTATATCTGCCGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS GCA 72 bp GATATACTTATAGGTCTTGTCTTCAGCAAACGGCATTaGTGCTCAGATTCTGGAGAGAGGGCTCTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: DILIGLVFSKRH*CSDSGERALAP
Trigger: TGGGGCCAGAGCCCTCTCTCCAGAATCTGAGCAGCAATGCCGTTTGCTGAAGACAAGACCTATAAGTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4
CDS TCA 72 bp GCAGAATCTCTACAACATCCACATTGCAAAAATTGCTaGAATTGCGGCAGATATACTTATAGGTCTTGTCTT +
Preference number: 6 (lower is better)
Translates to: AESLQHPHCKNC*NCGRYTYRSCL
Trigger: AAGACAAGACCTATAAGTATATCTGCCGCAATTTCAGCAATTTTTGCAATGTGGATGTTGTAGAGATTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416600.6
ENST00000428216.4