Pregenerated sensors for MATR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000015479, ENSG00000280987Ensembl transcript IDs: ENST00000394800.6, ENST00000394805.8, ENST00000502394.1, ENST00000502929.5, ENST00000503340.1, ENST00000503811.5, ENST00000504023.1, ENST00000505016.2, ENST00000505625.5, ENST00000508689.1, ENST00000509644.5, ENST00000514488.1, ENST00000514528.5, ENST00000618441.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTGTCTGGGTGACAGAGTaGGACCCTGTGTCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: NFTANMSGNIPTKKRFSRVWVTE*DPVSGK Trigger: CTTCCCTGACACAGGGTCTCACTCTGTCACCCAGAC...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTAGCACTTTGGGAGGCTaGAGCGAGCAGATCACTTGG | + |
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Preference number: 2 (lower is better) Translates to: NFTANMSGNIPTKKRFSRSTLGG*SEQITW Trigger: CCAAGTGATCTGCTCGCTTCAGCCTCCCAAAGTGCT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTTTTGAGCCCAAAGGCTaGGGTTGCAGAGAACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NFTANMSGNIPTKKRFSRFEPKG*GCRELC Trigger: GCACAGTTCTCTGCAACCTCAGCCTTTGGGCTCAAA...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTACTGAAAGGAAACACTaGAGAACTCCATTGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: NFTANMSGNIPTKKRFSRTERKH*RTPLCT Trigger: TGTGCACAATGGAGTTCTTCAGTGTTTCCTTTCAGT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTTGCAGAACTAATTCTTaGTCATCCGTATTACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: NFTANMSGNIPTKKRFSRCRTNS*SSVLLP Trigger: TGGAAGTAATACGGATGAGCAAGAATTAGTTCTGCA...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR TCA 72 bp | GAGACTGAGGTAGGAGGGTCATTTGAGCCCAAAGGCTaGGGTTGCAGAGAACTGTGCCACTGCACTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: ETEVGGSFEPKG*GCRELCHCTPV Trigger: GACTGGAGTGCAGTGGCACAGTTCTCTGCAACCTCAGCCTTTGGGCTCAAATGACCCTCCTACCTCAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTGCCCAAAGGCTGAGGTaGCAGAGAACTGTGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: NFTANMSGNIPTKKRFSRAQRLR*QRTVPL Trigger: CAGTGGCACAGTTCTCTGCAACCTCAGCCTTTGGGC...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTCTGGGGTCTGAACATTaGAAAGACAATGCCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: NFTANMSGNIPTKKRFSRLGSEH*KDNAYP Trigger: AGGATAGGCATTGTCTTTCAAATGTTCAGACCCCAG...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTCAACTGACAAATACGTaGGTTAACATTCCAAACATG | + |
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Preference number: 3 (lower is better) Translates to: GLTFSYVTGTRNPPATTFQLTNT*VNIPNM Trigger: CATGTTTGGAATGTTAACCAACGTATTTGTCAGTTG...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTCAACTGACAAATACGTaGGTTAACATTCCAAACATG | + |
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Preference number: 3 (lower is better) Translates to: NFTANMSGNIPTKKRFSRQLTNT*VNIPNM Trigger: CATGTTTGGAATGTTAACCAACGTATTTGTCAGTTG...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| 3UTR-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTTTTGAAATTAAAACTTaGTTTCTTGGCCAGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: NFTANMSGNIPTKKRFSRFEIKT*FLGQGW Trigger: CCATCCCTGGCCAAGAAACAAAGTTTTAATTTCAAA...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGCCACAGCCAGCCTCTaGGCACGTGTTCGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFATASL*ARVRSS Trigger: GGAGCTCCGAACACGTGCGCAGAGGCTGGCTGTGGC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR TCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTTCTCCGTCATCCAGCTaGGGCGGGAAATGGAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFSPSSS*GGKWRN Trigger: GTTCCTCCATTTCCCGCCTCAGCTGGATGACGGAGA...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR TCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGTCTGGGTGACAGAGTaGGACCCTGTGTCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFVWVTE*DPVSGK Trigger: CTTCCCTGACACAGGGTCTCACTCTGTCACCCAGAC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR TCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGGTAGGAGGGTCATTTaGGCCCAAAGGCTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFGRRVI*AQRLRL Trigger: CAACCTCAGCCTTTGGGCTCAAATGACCCTCCTACC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTACAGTCCCAGCACTTTaGGAGGCTGAAGCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFTVPAL*EAEASR Trigger: TCTGCTCGCTTCAGCCTCCCAAAGTGCTGGGACTGT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTATGCAGACTGTCACCTaGCACTATTTCCTCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFMQTVT*HYFLPS Trigger: TGAAGGGAGGAAATAGTGGCAGGTGACAGTCTGCAT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTCTGCTGCAACATGAATaGATCACCCATTGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFLLQHE*ITHCVS Trigger: GGACACACAATGGGTGATCCATTCATGTTGCAGCAG...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTATGGAGGAACAGACGTaGCTTACGAGTTCGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFTANMSGNIPTKKRFSRMEEQT*LTSSSP Trigger: GGGACTCGAACTCGTAAGCCACGTCTGTTCCTCCAT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTAATTCAAGATCAACCTaGGCAACATGGCAAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFNSRST*ATWQSP Trigger: GGGGCTTTGCCATGTTGCCCAGGTTGATCTTGAATT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTCTGCTGCAACATGAATaGATCACCCATTGTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFTANMSGNIPTKKRFSRLLQHE*ITHCVS Trigger: GGACACACAATGGGTGATCCATTCATGTTGCAGCAG...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGAACTCTCAGTCTTCTaGGAACCATCAGTTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFELSVF*EPSVLD Trigger: ATCCAAAACTGATGGTTCCCAGAAGACTGAGAGTTC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTATCAATGCCTCTGTTTaGAATCCTCAGAACCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFINASV*NPQNQF Trigger: AAACTGGTTCTGAGGATTCCAAACAGAGGCATTGAT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGGGAACCATCAGTTTTaGATTTCTTATCACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFGNHQF*ISYHLE Trigger: CTCCAAGTGATAAGAAATCCAAAACTGATGGTTCCC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR TCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTACTTTACAGCAAACATaGGTGGAAACATTCCTACTA | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFTLQQT*VETFLL Trigger: TAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR GCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTCACTTGGAGATTCTTTaGCATCTGGAGAGTAAGATC | + |
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Preference number: 4 (lower is better) Translates to: NFTANMSGNIPTKKRFSRHLEIL*HLESKI Trigger: GATCTTACTCTCCAGATGGCAAAGAATCTCCAAGTG...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTTGCAGAACTAATTCTTaGTCATCCGTATTACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFCRTNS*SSVLLP Trigger: TGGAAGTAATACGGATGAGCAAGAATTAGTTCTGCA...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTAGATTCTTTGCCATCTaGAGAGTAAGATCTTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: GLTFSYVTGTRNPPATTFRFFAI*RVRSFS Trigger: CGAAAAAGATCTTACTCTCCAGATGGCAAAGAATCT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTATCAATGCCTCTGTTTaGAATCCTCAGAACCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: NFTANMSGNIPTKKRFSRINASV*NPQNQF Trigger: AAACTGGTTCTGAGGATTCCAAACAGAGGCATTGAT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTGGGAACCATCAGTTTTaGATTTCTTATCACTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NFTANMSGNIPTKKRFSRGNHQF*ISYHLE Trigger: CTCCAAGTGATAAGAAATCCAAAACTGATGGTTCCC...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR TCA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTACTTTACAGCAAACATaGGTGGAAACATTCCTACTA | + |
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Preference number: 4 (lower is better) Translates to: NFTANMSGNIPTKKRFSRTLQQT*VETFLL Trigger: TAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS CCA 90 bp | CTCCACTCCTCTTCACCCAAAATCTCCCGCCGCACCCTGGGCCCTTaGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACCTCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LHSSSPKISRRTLGP*PAACFPPGPLTSAA Trigger: GGCGGCGGAGGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAGGAGTGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514528.5 |
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| CDS CCA 90 bp | GCGTGTTTCCCTCCCGGACCGCTCACCTCCGCCGCCCTAGAAGGCTaGTTGCGCCGCCACTGCGCTCCTAACATGGCGGCCGCCGATCAG | + |
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Preference number: 5 (lower is better) Translates to: ACFPPGPLTSAALEG*LRRHCAPNMAAADQ Trigger: CTGATCGGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGGTGAGCGGTCCGGGAGGGAAACACGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508689.1 ENST00000514528.5 |
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| CDS CCA 90 bp | AGACAACTCTCTTCACCCAAAATCTCCCGCCGCACCCTGGGCCCTTaGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACCTCCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RQLSSPKISRRTLGP*PAACFPPGPLTSAA Trigger: GGCGGCGGAGGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAGAGTTGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508689.1 |
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| CDS GCA 90 bp | AGCAGACAACTCTCCGCCGCCCTAGAAGGCTGGTTGCGCCGCCACTaGGCTCCTAACATGGCGGCCGCCGATCAGGCGGCTCACATACGC | + |
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Preference number: 5 (lower is better) Translates to: SRQLSAALEGWLRRH*APNMAAADQAAHIR Trigger: GCGTATGTGAGCCGCCTGATCGGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGAGTTGTCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618441.5 |
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| CDS CCA 90 bp | GAACCAGCAGACAACTCTCTTCACCCAAAATCTCCCGCCGCACCCTaGGCCCTTGGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: EPADNSLHPKSPAAP*ALGRPRVSLPDRSP Trigger: AGGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAGAGTTGTCTGCTGGTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508689.1 |
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| CDS CCA 90 bp | TATGTTGACTCCACTCCTCTTCACCCAAAATCTCCCGCCGCACCCTaGGCCCTTGGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: YVDSTPLHPKSPAAP*ALGRPRVSLPDRSP Trigger: AGGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAGGAGTGGAGTCAACATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514528.5 |
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| CDS TCA 90 bp | CTGTTTGTCAACCTCCTGGTACGGAGGACGGGGCTGAGGATCGTTTaGGCCGGAGGCGGAGGTTGCCGTGAGCCTAGTGCACCACTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LFVNLLVRRTGLRIV*AGGGGCREPSAPLH Trigger: GTGCAGTGGTGCACTAGGCTCACGGCAACCTCCGCCTCCGGCTCAAACGATCCTCAGCCCCGTCCTCCGTACCAGGAGGTTGACAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502929.5 |
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| CDS TCA 90 bp | CGGTCGTTGTTCTTTAATCCCGGAGATCCCTCTCCGTCATCCAGCTaGGGCGGGAAATGGAGGAACAGACGTGGCTTACGAGTTCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: RSLFFNPGDPSPSSS*GGKWRNRRGLRVRV Trigger: GACTCGAACTCGTAAGCCACGTCTGTTCCTCCATTTCCCGCCTCAGCTGGATGACGGAGAGGGATCTCCGGGATTAAAGAACAACGACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000502929.5 |
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| CDS CCA 90 bp | TCCCTCTCCGTCATCCAGCTGAGGCGGGAAATGGAGGAACAGACGTaGCTTACGAGTTCGAGTCCCATTCCCGAAAAGGCTGTTTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: SLSVIQLRREMEEQT*LTSSSPIPEKAVCQ Trigger: TTGACAAACAGCCTTTTCGGGAATGGGACTCGAACTCGTAAGCCACGTCTGTTCCTCCATTTCCCGCCTCAGCTGGATGACGGAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000502929.5 |
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| CDS GCA 90 bp | TGCCGAACACAGAACATGGCACAGAGCTCGAAATGCAAAGAACGATaGGGCGACTACACCACGGTACTCCAAAACCCTTTGTCTGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: CRTQNMAQSSKCKER*GDYTTVLQNPLSGN Trigger: GTTTCCAGACAAAGGGTTTTGGAGTACCGTGGTGTAGTCGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTGTGTTCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
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| CDS GCA 90 bp | ATCCACGGTAAATGCCGAACACAGAACATGGCACAGAGCTCGAAATaGAAAGAACGATGCGGCGACTACACCACGGTACTCCAAAACCCT | + |
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Preference number: 5 (lower is better) Translates to: IHGKCRTQNMAQSSK*KERCGDYTTVLQNP Trigger: AGGGTTTTGGAGTACCGTGGTGTAGTCGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTGTGTTCGGCATTTACCGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
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| CDS CCA 90 bp | ACACCTAGGGGATATTCATCCACGGTAAATGCCGAACACAGAACATaGCACAGAGCTCGAAATGCAAAGAACGATGCGGCGACTACACCA | + |
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Preference number: 5 (lower is better) Translates to: TPRGYSSTVNAEHRT*HRARNAKNDAATTP Trigger: TGGTGTAGTCGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTGTGTTCGGCATTTACCGTGGATGAATATCCCCTAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504023.1 |
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| CDS CCA 90 bp | AACTCTAGGGGATATTCATCCACGGTAAATGCCGAACACAGAACATaGCACAGAGCTCGAAATGCAAAGAACGATGCGGCGACTACACCA | + |
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Preference number: 5 (lower is better) Translates to: NSRGYSSTVNAEHRT*HRARNAKNDAATTP Trigger: TGGTGTAGTCGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTGTGTTCGGCATTTACCGTGGATGAATATCCCCTAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503340.1 |
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| CDS CCA 90 bp | GGATATCTAAAGTTTCAACTGGAAAGTAATGGACCACTGCCTTCTTaGGGACCAGTTTTAAAATGGCTTGTAAGGGCCGGGTGCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GYLKFQLESNGPLPS*GPVLKWLVRAGCSG Trigger: GCCACTGCACCCGGCCCTTACAAGCCATTTTAAAACTGGTCCCCAAGAAGGCAGTGGTCCATTACTTTCCAGTTGAAACTTTAGATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505625.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGCCCAAAGGCTGAGGTaGCAGAGAACTGTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLTFSYVTGTRNPPATTFAQRLR*QRTVPL Trigger: CAGTGGCACAGTTCTCTGCAACCTCAGCCTTTGGGC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS GCA 90 bp | AACCAGCAGACAACTCTGGCTCTTTACAGCAAGTTTGCTGATCCCTaGTCTAGAACAGCAGTGCATAATAAACTTTCTGAATTGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NQQTTLALYSKFADP*SRTAVHNKLSELVE Trigger: TTCCACCAATTCAGAAAGTTTATTATGCACTGCTGTTCTAGAGCAGGGATCAGCAAACTTGCTGTAAAGAGCCAGAGTTGTCTGCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505016.2 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTGTGTGTCCTGTATCATaGTCAGGATTCCATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLTFSYVTGTRNPPATTFVCPVS*SGFHSG Trigger: CCCAGAATGGAATCCTGACAATGATACAGGACACAC...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTACAACTCTGCGGTCGTaGTTCTTTAATCCCGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLTFSYVTGTRNPPATTFTTLRS*FFNPGD Trigger: ATCTCCGGGATTAAAGAACAACGACCGCAGAGTTGT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTACCTCGTTACTTATCTaGGTGTCACACAGGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NFTANMSGNIPTKKRFSRTSLLI*VSHRAV Trigger: GACAGCCCTGTGTGACACCAAGATAAGTAACGAGGT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTGTGTGTCCTGTATCATaGTCAGGATTCCATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NFTANMSGNIPTKKRFSRVCPVS*SGFHSG Trigger: CCCAGAATGGAATCCTGACAATGATACAGGACACAC...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTATAATAACCAGATTCTaGAGAACGACTTCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLTFSYVTGTRNPPATTFIITRF*RTTSMV Trigger: GACCATGGAAGTCGTTCTCAAGAATCTGGTTATTAT...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTTGCTCCATTGATATGTaGACTCCACTCCTTATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLTFSYVTGTRNPPATTFCSIDM*TPLLIR Trigger: TCTAATAAGGAGTGGAGTCAACATATCAATGGAGCA...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTTTTAGTTATGTAACAGGAACAAGAAATCCACCAGCAACAACATTTTCAAGTTCCTCGATCTaGTCCACCTTTTTAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLTFSYVTGTRNPPATTFSSSSI*STFLSF Trigger: AAAGCTTAAAAAGGTGGACAAGATCGAGGAACTTGA...AAATGTTGTTGCTGGTGGATTTCTTGTTCCTGTTACATAACTAAAAGTGAGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394805.8 |
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| CDS-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTTCCCGAAAAGGCTGTTaGTCAACCTCGTTACTTATC | + |
|
Preference number: 5 (lower is better) Translates to: NFTANMSGNIPTKKRFSRSRKGC*STSLLI Trigger: GATAAGTAACGAGGTTGACAAACAGCCTTTTCGGGA...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394800.6 |
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| CDS-3UTR CAA 90 bp | AACTTTACAGCAAACATGAGTGGAAACATTCCTACTAAAAAGAGGTTTTCTCGTATAATAACCAGATTCTaGAGAACGACTTCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NFTANMSGNIPTKKRFSRIITRF*RTTSMV Trigger: GACCATGGAAGTCGTTCTCAAGAATCTGGTTATTAT...ACGAGAAAACCTCTTTTTAGTAGGAATGTTTCCACTCATGTTTGCTGTAAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000394805.8 |
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| CDS CAA 72 bp | CCCGGACCGCTCACCTCCGCCGCCCTAGAAGGCTGGTaGCGCCGCCACTGCGCTCCTAACATGGCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGPLTSAALEGW*RRHCAPNMAAA Trigger: GGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGGTGAGCGGTCCGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508689.1 ENST00000514528.5 |
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| CDS CCA 72 bp | CCTCCCGGACCGCTCACCTCCGCCGCCCTAGAAGGCTaGTTGCGCCGCCACTGCGCTCCTAACATGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPGPLTSAALEG*LRRHCAPNMAA Trigger: GGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGGTGAGCGGTCCGGGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508689.1 ENST00000514528.5 |
||
| CDS GCA 72 bp | TCCTCCGCCGCCCTAGAAGGCTGGTTGCGCCGCCACTaGGCTCCTAACATGGCGGCCGCCGATCAGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAALEGWLRRH*APNMAAADQAA Trigger: AGCCGCCTGATCGGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503811.5 |
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| CDS GCA 72 bp | ACCTCCGCCGCCCTAGAAGGCTGGTTGCGCCGCCACTaGGCTCCTAACATGGCGGCCGCCGATCAGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSAALEGWLRRH*APNMAAADQAA Trigger: AGCCGCCTGATCGGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508689.1 |
||
| CDS GCA 72 bp | CTCTCCGCCGCCCTAGAAGGCTGGTTGCGCCGCCACTaGGCTCCTAACATGGCGGCCGCCGATCAGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSAALEGWLRRH*APNMAAADQAA Trigger: AGCCGCCTGATCGGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618441.5 |
||
| CDS CAA 90 bp | TGTTTCCCTCCCGGACCGCTCACCTCCGCCGCCCTAGAAGGCTGGTaGCGCCGCCACTGCGCTCCTAACATGGCGGCCGCCGATCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CFPPGPLTSAALEGW*RRHCAPNMAAADQA Trigger: CGCCTGATCGGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGGTGAGCGGTCCGGGAGGGAAACA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508689.1 |
||
| CDS CAA 90 bp | ACTCCACTCCTCTTCACCCAAAATCTCCCGCCGCACCCTGGGCCCTaGGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACCTCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TPLLFTQNLPPHPGP*AGRVFPSRTAHLRR Trigger: GCGGCGGAGGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAGGAGTGGAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514528.5 |
||
| CDS CAA 90 bp | CAGACAACTCTCTTCACCCAAAATCTCCCGCCGCACCCTGGGCCCTaGGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACCTCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QTTLFTQNLPPHPGP*AGRVFPSRTAHLRR Trigger: GCGGCGGAGGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAGAGTTGTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508689.1 |
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| CDS CCA 72 bp | TCTTCACCCAAAATCTCCCGCCGCACCCTGGGCCCTTaGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSPKISRRTLGP*PAACFPPGPLT Trigger: GGTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508689.1 ENST00000514528.5 |
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| CDS CAA 72 bp | CTCTTCACCCAAAATCTCCCGCCGCACCCTGGGCCCTaGGCCGGCCGCGTGTTTCCCTCCCGGACCGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFTQNLPPHPGP*AGRVFPSRTAH Trigger: GTGAGCGGTCCGGGAGGGAAACACGCGGCCGGCCAAGGGCCCAGGGTGCGGCGGGAGATTTTGGGTGAAGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508689.1 ENST00000514528.5 |
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| CDS CAA 72 bp | ACCAGCAGACAACTCTCCGCCGCCCTAGAAGGCTGGTaGCGCCGCCACTGCGCTCCTAACATGGCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSRQLSAALEGW*RRHCAPNMAAA Trigger: GGCGGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGAGTTGTCTGCTGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618441.5 |
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| CDS CCA 72 bp | AGAACCAGCAGACAACTCTCCGCCGCCCTAGAAGGCTaGTTGCGCCGCCACTGCGCTCCTAACATGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTSRQLSAALEG*LRRHCAPNMAA Trigger: GGCCGCCATGTTAGGAGCGCAGTGGCGGCGCAACCAGCCTTCTAGGGCGGCGGAGAGTTGTCTGCTGGTTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618441.5 |
||
| CDS TCA 72 bp | AACCTCCTGGTACGGAGGACGGGGCTGAGGATCGTTTaGGCCGGAGGCGGAGGTTGCCGTGAGCCTAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NLLVRRTGLRIV*AGGGGCREPSA Trigger: TGCACTAGGCTCACGGCAACCTCCGCCTCCGGCTCAAACGATCCTCAGCCCCGTCCTCCGTACCAGGAGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502929.5 |
||
| CDS TCA 72 bp | GGCTGTTTGTCAACCTCCTGGTACGGAGGACGGGGCTaGGGATCGTTTGAGCCGGAGGCGGAGGTTGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCLSTSWYGGRG*GSFEPEAEVAV Trigger: CACGGCAACCTCCGCCTCCGGCTCAAACGATCCTCAGCCCCGTCCTCCGTACCAGGAGGTTGACAAACAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502929.5 |
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| CDS CAA 72 bp | CGATGCGGCGACTACACCACGGTACTCCAAAACCCTTaGTCTGGAAACCGGAAGGTCCCACACCACACGATC | + |
|
Preference number: 6 (lower is better) Translates to: RCGDYTTVLQNP*SGNRKVPHHTI Trigger: GATCGTGTGGTGTGGGACCTTCCGGTTTCCAGACAAAGGGTTTTGGAGTACCGTGGTGTAGTCGCCGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
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| CDS CCA 72 bp | GTCATCCAGCTGAGGCGGGAAATGGAGGAACAGACGTaGCTTACGAGTTCGAGTCCCATTCCCGAAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VIQLRREMEEQT*LTSSSPIPEKA Trigger: AGCCTTTTCGGGAATGGGACTCGAACTCGTAAGCCACGTCTGTTCCTCCATTTCCCGCCTCAGCTGGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000502929.5 |
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| CDS CAA 90 bp | TGCAAAGAACGATGCGGCGACTACACCACGGTACTCCAAAACCCTTaGTCTGGAAACCGGAAGGTCCCACACCACACGATCCTCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CKERCGDYTTVLQNP*SGNRKVPHHTILSG Trigger: TCCAGAGAGGATCGTGTGGTGTGGGACCTTCCGGTTTCCAGACAAAGGGTTTTGGAGTACCGTGGTGTAGTCGCCGCATCGTTCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
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| CDS TCA 72 bp | TTCTTTAATCCCGGAGATCCCTCTCCGTCATCCAGCTaGGGCGGGAAATGGAGGAACAGACGTGGCTTACGA | + |
|
Preference number: 6 (lower is better) Translates to: FFNPGDPSPSSS*GGKWRNRRGLR Trigger: TCGTAAGCCACGTCTGTTCCTCCATTTCCCGCCTCAGCTGGATGACGGAGAGGGATCTCCGGGATTAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394800.6 ENST00000502929.5 |
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| CDS TCA 72 bp | AAAAACGCCAGATGTGGTGGTGGTACATGCGTCACTTaGGCCTGGGTGGTAGAGAGTGCAATGAGCTGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: KNARCGGGTCVT*AWVVESAMSCE Trigger: TTCGCAGCTCATTGCACTCTCTACCACCCAGGCTCAAGTGACGCATGTACCACCACCACATCTGGCGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505625.5 |
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| CDS TCA 72 bp | AGGTCCTGCCATGTGCCAAGCACTGCGATTGGGATCTaGAAACTGCACATGCAGACTGTCACCTGCCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: RSCHVPSTAIGI*KLHMQTVTCHY Trigger: ATAGTGGCAGGTGACAGTCTGCATGTGCAGTTTTCAGATCCCAATCGCAGTGCTTGGCACATGGCAGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509644.5 |
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| CDS GCA 72 bp | GCCATGTGCCAAGCACTGCGATTGGGATCTGAAAACTaGACATGCAGACTGTCACCTGCCACTATTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AMCQALRLGSEN*TCRLSPATISS Trigger: GGAGGAAATAGTGGCAGGTGACAGTCTGCATGTGCAGTTTTCAGATCCCAATCGCAGTGCTTGGCACATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509644.5 |
||
| CDS CAA 72 bp | ACCAGCAGACAACTCTCGCACTGTACTGCAGGCGGCTaGTTCCACGACGCAGTACGAAAAACAAGCGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSRQLSHCTAGG*FHDAVRKTSVN Trigger: GTTAACGCTTGTTTTTCGTACTGCGTCGTGGAACAAGCCGCCTGCAGTACAGTGCGAGAGTTGTCTGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514488.1 |
||
| CDS GCA 72 bp | CAGAACATGGCACAGAGCTCGAAATGCAAAGAACGATaGGGCGACTACACCACGGTACTCCAAAACCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QNMAQSSKCKER*GDYTTVLQNPL Trigger: CAAAGGGTTTTGGAGTACCGTGGTGTAGTCGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
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| CDS GCA 72 bp | AAATGCCGAACACAGAACATGGCACAGAGCTCGAAATaGAAAGAACGATGCGGCGACTACACCACGGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: KCRTQNMAQSSK*KERCGDYTTVL Trigger: GAGTACCGTGGTGTAGTCGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTGTGTTCGGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
||
| CDS CCA 72 bp | GGATATTCATCCACGGTAAATGCCGAACACAGAACATaGCACAGAGCTCGAAATGCAAAGAACGATGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GYSSTVNAEHRT*HRARNAKNDAA Trigger: CGCCGCATCGTTCTTTGCATTTCGAGCTCTGTGCCATGTTCTGTGTTCGGCATTTACCGTGGATGAATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503340.1 ENST00000504023.1 |
||
| CDS CAA 72 bp | CAAGCTGAGAACCAGCAGACAACTTGCAACTCAGCCTaGGAGGGAGTACACAAATCAGAAGGAGGTCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QAENQQTTCNSA*EGVHKSEGGQV Trigger: CACTTGACCTCCTTCTGATTTGTGTACTCCCTCCAAGGCTGAGTTGCAAGTTGTCTGCTGGTTCTCAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502394.1 |
||
| CDS CCA 72 bp | AAGCTGAGAACCAGCAGACAACTTGCAACTCAGCCTTaGAGGGAGTACACAAATCAGAAGGAGGTCAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: KLRTSRQLATQP*REYTNQKEVKC Trigger: ACACTTGACCTCCTTCTGATTTGTGTACTCCCTCCAAGGCTGAGTTGCAAGTTGTCTGCTGGTTCTCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502394.1 |
||
| CDS CCA 72 bp | AAGTTTCAACTGGAAAGTAATGGACCACTGCCTTCTTaGGGACCAGTTTTAAAATGGCTTGTAAGGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KFQLESNGPLPS*GPVLKWLVRAG Trigger: CCCGGCCCTTACAAGCCATTTTAAAACTGGTCCCCAAGAAGGCAGTGGTCCATTACTTTCCAGTTGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505625.5 |
||
| CDS CAA 72 bp | AGAACCAGCAGACAACTCTGGCTCTTTACAGCAAGTTaGCTGATCCCTGCTCTAGAACAGCAGTGCATAATA | + |
|
Preference number: 6 (lower is better) Translates to: RTSRQLWLFTAS*LIPALEQQCII Trigger: TATTATGCACTGCTGTTCTAGAGCAGGGATCAGCAAACTTGCTGTAAAGAGCCAGAGTTGTCTGCTGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505016.2 |
||
| CDS TCA 72 bp | ACCTCCCAAACTCATCCAATGACTAATCTGTACTACTaGTCTATTACTGGTTGGTTTACGGTGGGGACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: TSQTHPMTNLYY*SITGWFTVGTK Trigger: CTTAGTCCCCACCGTAAACCAACCAGTAATAGATCAGTAGTACAGATTAGTCATTGGATGAGTTTGGGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505625.5 |
||
| CDS CAA 90 bp | AAGGAACTCAAGATCTCTCCAGCTGGCTCTCTAATCATCAGCTATTaGGGATATCTAAAGTTTCAACTGGAAAGTAATGGACCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KELKISPAGSLIISY*GYLKFQLESNGPLP Trigger: AGGCAGTGGTCCATTACTTTCCAGTTGAAACTTTAGATATCCCAAATAGCTGATGATTAGAGAGCCAGCTGGAGAGATCTTGAGTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505625.5 |
||
| CDS GCA 72 bp | ACAACTCTGGCTCTTTACAGCAAGTTTGCTGATCCCTaGTCTAGAACAGCAGTGCATAATAAACTTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TTLALYSKFADP*SRTAVHNKLSE Trigger: TTCAGAAAGTTTATTATGCACTGCTGTTCTAGAGCAGGGATCAGCAAACTTGCTGTAAAGAGCCAGAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505016.2 |
||
| CDS CAA 90 bp | CAGTGCATAATAAACTTTCTGAATTGGTGGAAATGTTCTCTAATATaGGAGTTGTCCAATAGGGTAGTCAGCAGCCAGATTGTTACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: QCIINFLNWWKCSLI*ELSNRVVSSQIVTY Trigger: ATAAGTAACAATCTGGCTGCTGACTACCCTATTGGACAACTCCAATATTAGAGAACATTTCCACCAATTCAGAAAGTTTATTATGCACTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505016.2 |
||
| CDS CAA 90 bp | ATAATAAACTTTCTGAATTGGTGGAAATGTTCTCTAATATTGGAGTaGTCCAATAGGGTAGTCAGCAGCCAGATTGTTACTTATCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: IINFLNWWKCSLILE*SNRVVSSQIVTYLG Trigger: ACCAAGATAAGTAACAATCTGGCTGCTGACTACCCTATTGGACAACTCCAATATTAGAGAACATTTCCACCAATTCAGAAAGTTTATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505016.2 |
||
| CDS TCA 72 bp | AAGGAGTGCCTCTTTCCAAATTTAGGGTGGGAAACATaGCATTCTTTCACTATTTACTCTTTTATGGTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: KECLFPNLGWET*HSFTIYSFMVY Trigger: GTAAACCATAAAAGAGTAAATAGTGAAAGAATGTCATGTTTCCCACCCTAAATTTGGAAAGAGGCACTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505625.5 |
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