RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MATN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132561

Ensembl transcript IDs: ENST00000254898.7, ENST00000517321.5, ENST00000518154.5, ENST00000518238.1, ENST00000518370.1, ENST00000519582.5, ENST00000519585.5, ENST00000520016.5, ENST00000520160.1, ENST00000521041.5, ENST00000521689.5, ENST00000521952.5, ENST00000522025.6, ENST00000522270.5, ENST00000523490.1, ENST00000523561.1, ENST00000524308.5

Found 840 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAACTTTATCGTATAGTCAAATGAGATTGCACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTT +
Preference number: 1 (lower is better)
Translates to: QTLSYSQMRLHTKAG*GRSKLCPQYITKYL
Trigger: AAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTGCAATCTCATTTGACTATACGATAAAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
3UTR GCA 90 bp CATTTTCAGTTTTATGAGATGTCAACAGACTTACTCTACAAAGAGTaGCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCT +
Preference number: 1 (lower is better)
Translates to: HFQFYEMSTDLLYKE*HLHSYYKNLTFPHP
Trigger: AGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCTGTTGACATCTCATAAAACTGAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR-3UTR CCA 90 bp TCCCCTGCTGGAGAGTCCTGTCTTCCATCGGAGTCTTCTAGAGCTTCACAGATGGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 2 (lower is better)
Translates to: SPAGESCLPSESSRASQMVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...CATCTGTGAAGCTCTAGAAGACTCCGATGGAAGACAGGACTCTCCAGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR-3UTR CCA 90 bp CTCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGATTCTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LRRFSRASILCVISSKRCDSVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGAATC...ACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR-3UTR CCA 90 bp TTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGTTAATTTTCTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: FSRASILCVISSKRCVNFLLDRF*QFPCWR
Trigger: TCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAG...AAAATTAACACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR-3UTR CCA 90 bp TCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 2 (lower is better)
Translates to: SGDFPGLPFSVSFLLSAVEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...CACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
3UTR-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
3UTR-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
3UTR-3UTR TCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTCACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGT +
Preference number: 2 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHIHTKAG*GRSKLC
Trigger: ACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTG...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
3UTR-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGT +
Preference number: 2 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLHTKAG*GRSKLC
Trigger: ACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
3UTR-3UTR TCA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTCAGGTTTCTCAGTACTaGTTGTTTTACTTCACAACA +
Preference number: 2 (lower is better)
Translates to: YRCSTFLYMRCCISVVWIQVSQY*LFYFTT
Trigger: TGTTGTGAAGTAAAACAATCAGTACTGAGAAACCTG...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR-3UTR CAA 90 bp AAGAGATGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGTACATAGTGATACTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 3 (lower is better)
Translates to: KRCLFVGSEAISCSSSSMYIVIL*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAGTATCACTATGTA...CATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR-3UTR CAA 90 bp CTCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTTTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 3 (lower is better)
Translates to: LRRFSRASILCVISSKRCFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...ACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR TCA 72 bp AGCTTTGGGGCTCTGCACTGCGTTCATTGTAATCCGTaGTACAATGACTACAAATGTGTCGCGATTTCTAAT +
Preference number: 3 (lower is better)
Translates to: SFGALHCVHCNP*YNDYKCVAISN
Trigger: ATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCCCAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
3UTR CCA 72 bp GTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTaGTATGGATTACACCAGAGTTTATCAGTTCCCCTT +
Preference number: 3 (lower is better)
Translates to: VAHSCTCGVVFL*YGLHQSLSVPL
Trigger: AAGGGGAACTGATAAACTCTGGTGTAATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR TCA 72 bp TCGTATAGTCAAATGAGATTGCACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGTCCACAGTATATTACA +
Preference number: 3 (lower is better)
Translates to: SYSQMRLHTKAG*GRSKLCPQYIT
Trigger: TGTAATATACTGTGGACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTGCAATCTCATTTGACTATACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
3UTR TCA 72 bp GAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATaGGATTGCACACTAAGGCAGGATGAGGCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: EVRLCKLYRIVK*DCTLRQDEAEA
Trigger: TGCTTCTGCCTCATCCTGCCTTAGTGTGCAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
3UTR CCA 72 bp ACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATaGATTACACCAGAGTTTATCAGTTCCCCTTCTGAT +
Preference number: 3 (lower is better)
Translates to: TFLYMRCCISVV*ITPEFISSPSD
Trigger: ATCAGAAGGGGAACTGATAAACTCTGGTGTAATCCATACCACAGAAATACAACACCGCATGTACAGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR-3UTR CAA 90 bp TGGGAAAGCTTTTGTGTAGACCGTAAAAGATTGTCTTCTTCAAACAGATATCTGAGATTCTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 3 (lower is better)
Translates to: WESFCVDRKRLSSSNRYLRFCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT...CAGATATCTGTTTGAAGAAGACAATCTTTTACGGTCTACACAAAAGCTTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR-3UTR CAA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 3 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 3 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
3UTR TCA 72 bp GTTTTACTTCACAACATTATTGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACTGCGTTCATTGTAATC +
Preference number: 3 (lower is better)
Translates to: VLLHNIIDLTIA*ALGLCTAFIVI
Trigger: GATTACAATGAACGCAGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATCAATAATGTTGTGAAGTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
3UTR GCA 72 bp AGATGTCAACAGACTTACTCTACAAAGAGTGCCATTTaGATTCTTACTACAAGAACCTCACATTTCCACATC +
Preference number: 3 (lower is better)
Translates to: RCQQTYSTKSAI*ILTTRTSHFHI
Trigger: GATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCTGTTGACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR GCA 72 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATaGGGTGTTGTATTTCTGTGGTATGGATTACACCAG +
Preference number: 3 (lower is better)
Translates to: PFICIDVAHSCT*GVVFLWYGLHQ
Trigger: CTGGTGTAATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR GCA 72 bp CGTAAAAGATTGTCTTCTTCAAACAGATATCTGTGTTaGACTGCAAAATTAGAACAGGAAAGTAGGTCTTGG +
Preference number: 3 (lower is better)
Translates to: RKRLSSSNRYLC*TAKLEQESRSW
Trigger: CCAAGACCTACTTTCCTGTTCTAATTTTGCAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
3UTR GCA 72 bp AAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTaGATAGCTTATTCATTCTCACCTGGTAAATTCATC +
Preference number: 3 (lower is better)
Translates to: KQVVSTVYYKIP*IAYSFSPGKFI
Trigger: GATGAATTTACCAGGTGAGAATGAATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGCTCGCTGGCTGCCTaGGAGGCGCTGGGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSRSLAA*EALGKG
Trigger: GCCCTTGCCCAGCGCCTCCCAGGCAGCCAGCGAGCG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGATGGACCTCCCACGTaGCCGCTCCCTGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSDGPPT*PLPGLG
Trigger: GCCGAGGCCAGGGAGCGGTCACGTGGGAGGTCCATC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp AGATTCTGTTGGCTGTTGGACCGTTTTTGGCAGTTCCCCTGCTGGAGAGTCCTGTGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RFCWLLDRFWQFPCWRVLWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...CAGGACTCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGATGCCGCATCCTCTTaGCAGCACGCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSDAASS*QHAPPR
Trigger: CCGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCGGCCACGGAGTCCTaGGGTCTCCCATCTGTCACG +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSATES*GLPSVT
Trigger: CGTGACAGATGGGAGACCTCAGGACTCCGTGGCCGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCCAGCCCAGTCATGGTaGCCGTGGACAGATGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSPAQSW*PWTDAA
Trigger: TGCGGCATCTGTCCACGGGCACCATGACTGGGCTGG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGAGCTGCAGGCCCGCTaGCCCGCCTTTTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSELQAR*PAFSEF
Trigger: GAACTCTGAAAAGGCGGGGCAGCGGGCCTGCAGCTC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520016.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGGGAGCTGGGCACTCTaGCGGCGCGCCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHGSWAL*RRALPA
Trigger: AGCAGGCAGGGCGCGCCGCCAGAGTGCCCAGCTCCC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGATGGACCTCCCACGTaGCCGCTCCCTGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQDGPPT*PLPGLG
Trigger: GCCGAGGCCAGGGAGCGGTCACGTGGGAGGTCCATC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGATGGACCTCCCACGTaGCCGCTCCCTGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLDGPPT*PLPGLG
Trigger: GCCGAGGCCAGGGAGCGGTCACGTGGGAGGTCCATC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGGCCCCCTCTGCTTCTaGGAATGCGATGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSGPLCF*ECDVQG
Trigger: GCCCTGAACATCGCATTCTCAGAAGCAGAGGGGGCC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGCCATGGTCCTGCTGTaGACAGTGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSAMVLL*TVVHSA
Trigger: AGCCGAGTGGACCACTGTGCACAGCAGGACCATGGC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGCGCGCCCTGCCTGCTaGCACCTGGCTCCACTCCGT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIARPAC*HLAPLR
Trigger: ACGGAGTGGAGCCAGGTGGCAGCAGGCAGGGCGCGC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGCGGCGCGCCCTGCCTaGTGCCACCTGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSAARPA*CHLAPL
Trigger: GAGTGGAGCCAGGTGGCAGCAGGCAGGGCGCGCCGC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACTCGGGGATCGCTCGTaGGAGGCGAGGACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQLGDRS*EARTEP
Trigger: GGGCTCCGTCCTCGCCTCCCACGAGCGATCCCCGAG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTCGGGGATCGCTCGTaGGAGGCGAGGACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLGDRS*EARTEP
Trigger: GGGCTCCGTCCTCGCCTCCCACGAGCGATCCCCGAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCTCGGGGATCGCTCGTaGGAGGCGAGGACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHLGDRS*EARTEP
Trigger: GGGCTCCGTCCTCGCCTCCCACGAGCGATCCCCGAG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAGGGCCGTCTGCGGGTaGGTCCGAGCGTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQRAVCG*VRACLP
Trigger: GGGCAGACACGCTCGGACCCACCCGCAGACGGCCCT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTGTCCTCTTTGGGGATaGGGAAGGCGCGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSCPLWG*GRRGEG
Trigger: TCCCTCTCCGCGCCTTCCCCATCCCCAAAGAGGACA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGATGGACCTCCCACGTaGCCGCTCCCTGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYDGPPT*PLPGLG
Trigger: GCCGAGGCCAGGGAGCGGTCACGTGGGAGGTCCATC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp CTCCTCAATGGCTTTTCCTACCCCAACAGCATACATAGTGATACTCTTGCACCGTGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLNGFSYPNSIHSDTLAPCPSGH*QAKDLS
Trigger: GGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACA...CGGTGCAAGAGTATCACTATGTATGCTGTTGGGGTAGGAAAAGCCATTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACTCGGGGATCGCTCGTaGGAGGCGAGGACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSLGDRS*EARTEP
Trigger: GGGCTCCGTCCTCGCCTCCCACGAGCGATCCCCGAG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCCTGCTGTGCACAGTaGTCCACTCGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSCCAQ*STRLQV
Trigger: AACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCG +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSTCVEY*SSPTRA
Trigger: CGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGCACCTGCAGACGTATaGGCCAGGGATGTTGATGCA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSAPADV*ARDVDA
Trigger: TGCATCAACATCCCTGGCTCATACGTCTGCAGGTGC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGATGAGGAAGCCTTCTaGGCACTGGCAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSDEEAF*ALADEG
Trigger: TCCTTCGTCTGCCAGTGCTCAGAAGGCTTCCTCATC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTCCGCCGCCGCCGCTTaGTCCAAGTCCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISAAAA*SKSHPR
Trigger: TCTGGGATGGGACTTGGAGCAAGCGGCGGCGGCGGA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254898.7
ENST00000521689.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTCCGCCGCCGCCGCTTaGTCCAAGTCCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSAAAA*SKSHPR
Trigger: TCTGGGATGGGACTTGGAGCAAGCGGCGGCGGCGGA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254898.7
ENST00000521689.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACCCAGCTTCTGCCTCTaGCTCTGTCTCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRPSFCL*LCLRRR
Trigger: GCGGCGGCGGAGACAGAGGCAGAGGCAGAAGCTGGG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254898.7
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCCAGCTTCTGCCTCTaGCTCTGTCTCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPSFCL*LCLRRR
Trigger: GCGGCGGCGGAGACAGAGGCAGAGGCAGAAGCTGGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGATGCCCGTGTCCCGTaGCTTAGCAGCCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQDARVP*LSSHLG
Trigger: GCCGAGGTGGCTGCTAAGGCACGGGACACGGGCATC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGATGCCCGTGTCCCGTaGCTTAGCAGCCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIDARVP*LSSHLG
Trigger: GCCGAGGTGGCTGCTAAGGCACGGGACACGGGCATC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGATGCCCGTGTCCCGTaGCTTAGCAGCCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHDARVP*LSSHLG
Trigger: GCCGAGGTGGCTGCTAAGGCACGGGACACGGGCATC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTATGCTCCAGGGTGCTaGACATATGGGCCGTGCACA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSYAPGC*TYGPCT
Trigger: TGTGCACGGCCCATATGTGCAGCACCCTGGAGCATA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGTTATGCTCCAGGGTaGTGCACATATGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSYAPG*CTYGPC
Trigger: GCACGGCCCATATGTGCAGCACCCTGGAGCATAACT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGTGGTCCACTCGGCTaGAGGTTTTGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSGPLG*RFCHWG
Trigger: ACCCCAATGGCAAAACCTGCAGCCGAGTGGACCACT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSQPWS*CAQWST
Trigger: AGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGGTGAACACAATGGCTaGTCTGGGCACCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSGEHNG*SGHPCG
Trigger: TCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACTGAACTCCAGGAGCTaGAGGCCCGCTGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSLNSRS*RPAAPP
Trigger: AGGCGGGGCAGCGGGCCTGCAGCTCCTGGAGTTCAG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520016.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGCTCCACTCCGTCCGTaGCTGAGCCCAGGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSAPLRP*LSPGGH
Trigger: ATGCCCGCCTGGGCTCAGGCACGGACGGAGTGGAGC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGCCACAAGGAAGACATaGTCCTCATGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSATRKT*SSWGSL
Trigger: GAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp AGATTCTGTTGGCTGTTGGACCGTTTTTGGCAGTTCCCCTGCTGGAGAGTCCTGCCATGGTCTATAGCTTaGCAGACATCTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RFCWLLDRFWQFPCWRVLPWSIA*QTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAAGCTATAGACCATGG...CAGGACTCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCTGTGTGGACCTGTGTaGAATACTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSLCGPV*NTGAAP
Trigger: TGGGGCTGCTCCAGTATTCCACACAGGTCCACACAG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTGGCCTTGGCTTTACTaGCCCACTCGGAGACGTCAT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSWPWLY*PTRRRH
Trigger: ATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGCCA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TGTGCTGAAGTCTTCGGCATAGAAGAGATGCTTGTTTGTGGGCTCAGAGGCAATCTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CAEVFGIEEMLVCGLRGNLLDRF*QFPCWR
Trigger: TCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAG...ATTGCCTCTGAGCCCACAAACAAGCATCTCTTCTATGCCGAAGACTTCAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACTGCCTGCTGCCACCTaGCTCCACTCCGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSLPAAT*LHSVRA
Trigger: GGCACGGACGGAGTGGAGCCAGGTGGCAGCAGGCAG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR TCA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACGATGCCGCATCCTCTTaGCAGCACGCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYDAASS*QHAPPR
Trigger: CCGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATC...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGATGCCGCATCCTCTTaGCAGCACGCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIDAASS*QHAPPR
Trigger: CCGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTTCGGCCACGGAGTCCTaGGGTCTCCCATCTGTCACG +
Preference number: 4 (lower is better)
Translates to: YRCSTFLYMRCCISVVWISATES*GLPSVT
Trigger: CGTGACAGATGGGAGACCTCAGGACTCCGTGGCCGA...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTCGGCCACGGAGTCCTaGGGTCTCCCATCTGTCACG +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSATES*GLPSVT
Trigger: CGTGACAGATGGGAGACCTCAGGACTCCGTGGCCGA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSMSQGC*CRSGHS
Trigger: ACTGTGCCCACTTCTGCATCAACATCCCTGGCTCAT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCTGGAGAGTCCTGTCTTCCATCGGAGTCTTCTAGAGCTTCACAGATGCCTTTCAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: AGESCLPSESSRASQMPFRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...GAAAGGCATCTGTGAAGCTCTAGAAGACTCCGATGGAAGACAGGACTCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp TCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGGCACTCGCACGTGTATaGGTCATCACTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: SGDFPGLPFSVSFLLSAVALARV*VITVHT
Trigger: TGTGTGAACAGTGATGACTCATACACGTGCGAGTGC...CACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGAGCCCGTCCGTCGGTaGACACAATGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQEPVRR*TQWLLW
Trigger: CCAGAGCAGCCATTGTGTTCACCGACGGACGGGCTC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGAGCCCGTCCGTCGGTaGACACAATGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHEPVRR*TQWLLW
Trigger: CCAGAGCAGCCATTGTGTTCACCGACGGACGGGCTC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGAGCCCGTCCGTCGGTaGACACAATGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIEPVRR*TQWLLW
Trigger: CCAGAGCAGCCATTGTGTTCACCGACGGACGGGCTC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATCGGAGACGTCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGACGTCTCCGA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTCGGAGACGTCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGACGTCTCCGA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCCAGCCCAGTCATGGTaGCCGTGGACAGATGCCGCA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIPAQSW*PWTDAA
Trigger: TGCGGCATCTGTCCACGGGCACCATGACTGGGCTGG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp AAGAGATGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGTTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRCLFVGSEAISCSSSSMFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...CATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATGGCCAGCCCAGTCATaGTGCCCGTGGACAGATGCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQWPAQS*CPWTDA
Trigger: GGCATCTGTCCACGGGCACCATGACTGGGCTGGCCA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATGGCCAGCCCAGTCATaGTGCCCGTGGACAGATGCC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLWPAQS*CPWTDA
Trigger: GGCATCTGTCCACGGGCACCATGACTGGGCTGGCCA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATGGCCAGCCCAGTCATaGTGCCCGTGGACAGATGCC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQWPAQS*CPWTDA
Trigger: GGCATCTGTCCACGGGCACCATGACTGGGCTGGCCA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGGGTGCTGCACATATaGGCCGTGCACAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSRVLHI*AVHNFF
Trigger: GAAGAAGTTGTGCACGGCCCATATGTGCAGCACCCT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGCTGCTCACAGTTGTaGTCCTCCATGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSCSQL*SSMAHR
Trigger: TCTGTGTGCCATGGAGGACCACAACTGTGAGCAGCT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSCRFCH*GPECSH
Trigger: GTGGCTACACTCTGGACCCCAATGGCAAAACCTGCA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAAGCCTTCTGAGCACTaGCAGACGAAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSKPSEH*QTKESS
Trigger: GGAGGATTCCTTCGTCTGCCAGTGCTCAGAAGGCTT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSECSQP*SPRAQE
Trigger: CTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTCCTACCCCAACAGATTCTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSEAISCSSSSMAFPTPTDSVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGAATC...TGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTCCTACCCCAACATGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCT +
Preference number: 4 (lower is better)
Translates to: GSEAISCSSSSMAFPTPTCSQPW*VDLQTS
Trigger: AGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...TGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGGCCCCCTCTGCTTCTaGGAATGCGATGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQGPLCF*ECDVQG
Trigger: GCCCTGAACATCGCATTCTCAGAAGCAGAGGGGGCC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGAGCCCGTCCGTCGGTaGACACAATGGCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLEPVRR*TQWLLW
Trigger: CCAGAGCAGCCATTGTGTTCACCGACGGACGGGCTC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATCGGAGACGTCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSSETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGACGTCTCCGA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATCGGAGACGTCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGACGTCTCCGA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTCGGAGACGTCATCCTaGGCCCGTCCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYSETSS*ARPSVN
Trigger: GTTCACCGACGGACGGGCTCAGGATGACGTCTCCGA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTCCAGCCCAGTCATGGTaGCCGTGGACAGATGCCGCA +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHIPAQSW*PWTDAA
Trigger: TGCGGCATCTGTCCACGGGCACCATGACTGGGCTGG...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCAGCCCAGTCATGGTaGCCGTGGACAGATGCCGCA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPAQSW*PWTDAA
Trigger: TGCGGCATCTGTCCACGGGCACCATGACTGGGCTGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGATGCCCGTGTCCCGTaGCTTAGCAGCCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLDARVP*LSSHLG
Trigger: GCCGAGGTGGCTGCTAAGGCACGGGACACGGGCATC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGACATTCACACAGAGCTaGTCACAGTTGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSTFTQS*SQLWSS
Trigger: GGAGGACCACAACTGTGAGCAGCTCTGTGTGAATGT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGCCATGGTCCTGCTGTaGACAGTGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQAMVLL*TVVHSA
Trigger: AGCCGAGTGGACCACTGTGCACAGCAGGACCATGGC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGCCATGGTCCTGCTGTaGACAGTGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQAMVLL*TVVHSA
Trigger: AGCCGAGTGGACCACTGTGCACAGCAGGACCATGGC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLITSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGTTAATTTTACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSRASILCVISSKRCVNFTSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...AAAATTAACACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCATGGTGGGTTGATTTaGAGACATCCTTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSHGGLI*RHPSFG
Trigger: GCCGAAGGAAGGATGTCTGCAAATCAACCCACCATG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATGGCCAGCCCAGTCATaGTGCCCGTGGACAGATGCC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRWPAQS*CPWTDA
Trigger: GGCATCTGTCCACGGGCACCATGACTGGGCTGGCCA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGTTGTGGTCCTCCATaGCACACAGATCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSCGPP*HTDPGF
Trigger: GAATCCAGGATCTGTGTGCCATGGAGGACCACAACT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TGTGCTGAAGTCTTCGGCATAGAAGAGATGCTTGTTTGTGGGCTCAGAGGCAATGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: CAEVFGIEEMLVCGLRGNVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...ATTGCCTCTGAGCCCACAAACAAGCATCTCTTCTATGCCGAAGACTTCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTGCACTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSCTVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGTGCA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGAGGGGTGTCCTCTTTaGGGATGGGGAAGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLEGCPL*GWGRRG
Trigger: TCCGCGCCTTCCCCATCCCCAAAGAGGACACCCCTC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGGCCCCCTCTGCTTCTaGGAATGCGATGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYGPLCF*ECDVQG
Trigger: GCCCTGAACATCGCATTCTCAGAAGCAGAGGGGGCC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp TCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGTCTCATCCATTGTGCTaGAGTCTTCGGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: SGDFPGLPFSVSFLLSAVSHPLC*SLRHRR
Trigger: TCTTCTATGCCGAAGACTTCAGCACAATGGATGAGA...CACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAATTTCCGGGTCTCCCTaGACTCCAGGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLISGSP*TPGAAG
Trigger: GCCTGCAGCTCCTGGAGTTCAGGGAGACCCGGAAAT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520016.5
CDS-3UTR GCA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACGTGCCCGTGGACAGATaGCGCATCCTCTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYVPVDR*RILLTA
Trigger: TGCTGTCAAGAGGATGCGGCATCTGTCCACGGGCAC...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGTGCCCGTGGACAGATaGCGCATCCTCTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLVPVDR*RILLTA
Trigger: TGCTGTCAAGAGGATGCGGCATCTGTCCACGGGCAC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGAATGTAGCCTTGTTTaGACCTGCAGACGTATGAGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSECSLV*TCRRMS
Trigger: GCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGACAGATCCTGGATTCTaGAAGTCGTCTGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSTDPGF*KSSDPS
Trigger: ACTCGGATCAGACGACTTGCAGAATCCAGGATCTGT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGCCATGGTCCTGCTGTaGACAGTGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRAMVLL*TVVHSA
Trigger: AGCCGAGTGGACCACTGTGCACAGCAGGACCATGGC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGCCATGGTCCTGCTGTaGACAGTGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYAMVLL*TVVHSA
Trigger: AGCCGAGTGGACCACTGTGCACAGCAGGACCATGGC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYTSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCAATTGGGCCTTCAGTaGATTTCTTGCACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSQLGLQ*ISCTVF
Trigger: GAAGACGGTGCAAGAAATGCACTGAAGGCCCAATTG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAACAGTGCTGCCATATTaGAGCAGGCCCACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQTVLPY*SRPTRV
Trigger: CACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCACAGTGCTGCCATATTaGAGCAGGCCCACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLITVLPY*SRPTRV
Trigger: CACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACAGTCATGGTGCCCGTaGACAGATGCCGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLQSWCP*TDAASS
Trigger: AGAGGATGCGGCATCTGTCCACGGGCACCATGACTG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSMLMQK*AQLCSR
Trigger: CCTGGAGCATAACTGTGCCCACTTCTGCATCAACAT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTCCTGCTGTGCACAGTaGTCCACTCGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISCCAQ*STRLQV
Trigger: AACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATCCTGCTGTGCACAGTaGTCCACTCGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLSCCAQ*STRLQV
Trigger: AACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTCCTGCTGTGCACAGTaGTCCACTCGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSCCAQ*STRLQV
Trigger: AACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATCCTGCTGTGCACAGTaGTCCACTCGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQSCCAQ*STRLQV
Trigger: AACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TGTGCTGAAGTCTTCGGCATAGAAGAGATGCTTGTTTGTGGGCTCAGAGGCAATATGTGTTCACAGCCATaGTCTATAGCTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: CAEVFGIEEMLVCGLRGNMCSQP*SIAWQT
Trigger: TGTCTGCCAAGCTATAGACCATGGCTGTGAACACAT...ATTGCCTCTGAGCCCACAAACAAGCATCTCTTCTATGCCGAAGACTTCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLITCVEY*SSPTRA
Trigger: CGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCTGGCCCCTTCTCCTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSLAPSP*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGGAGAAGGGGCCAG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGGCCCCCTCTGCTTCTaGGAATGCGATGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLGPLCF*ECDVQG
Trigger: GCCCTGAACATCGCATTCTCAGAAGCAGAGGGGGCC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGCACCTGCAGACGTATaGGCCAGGGATGTTGATGCA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLAPADV*ARDVDA
Trigger: TGCATCAACATCCCTGGCTCATACGTCTGCAGGTGC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISSPPC*RTHAHS
Trigger: GCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSSPPC*RTHAHS
Trigger: GCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQSSPPC*RTHAHS
Trigger: GCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGATGAGGAAGCCTTCTaGGCACTGGCAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQDEEAF*ALADEG
Trigger: TCCTTCGTCTGCCAGTGCTCAGAAGGCTTCCTCATC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGATGAGGAAGCCTTCTaGGCACTGGCAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLDEEAF*ALADEG
Trigger: TCCTTCGTCTGCCAGTGCTCAGAAGGCTTCCTCATC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQCPSGH*QAKDLS
Trigger: GGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHCPSGH*QAKDLS
Trigger: GGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLCPSGH*QAKDLS
Trigger: GGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCTCATCCATTGTGCTaGAGTCTTCGGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSHPLC*SLRHRR
Trigger: TCTTCTATGCCGAAGACTTCAGCACAATGGATGAGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTCCTACCCCAACAGCATACCTTGGATATTTATGGTaGCTGGCTCAGATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: EAISCSSSSMAFPTPTAYLGYLW*LAQILL
Trigger: CAACAGAATCTGAGCCAGTCACCATAAATATCCAAG...GTATGCTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAAGAAGAGGGCAGGGTaGGATTTCCGGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRKKRAG*DFRVSL
Trigger: CAGGGAGACCCGGAAATCTCACCCTGCCCTCTTCTT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520016.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGTGCCCGTGGACAGATaGCGCATCCTCTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLVPVDR*RILLTA
Trigger: TGCTGTCAAGAGGATGCGGCATCTGTCCACGGGCAC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATATGCTCCAGGGTGCTaGACATATGGGCCGTGCACA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLYAPGC*TYGPCT
Trigger: TGTGCACGGCCCATATGTGCAGCACCCTGGAGCATA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATATGCTCCAGGGTGCTaGACATATGGGCCGTGCACA +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQYAPGC*TYGPCT
Trigger: TGTGCACGGCCCATATGTGCAGCACCCTGGAGCATA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATATGCTCCAGGGTGCTaGACATATGGGCCGTGCACA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQYAPGC*TYGPCT
Trigger: TGTGCACGGCCCATATGTGCAGCACCCTGGAGCATA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGTTATGCTCCAGGGTaGTGCACATATGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISYAPG*CTYGPC
Trigger: GCACGGCCCATATGTGCAGCACCCTGGAGCATAACT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAGTTATGCTCCAGGGTaGTGCACATATGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSYAPG*CTYGPC
Trigger: GCACGGCCCATATGTGCAGCACCCTGGAGCATAACT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACTCGGCTGCAGGTTTTaGCATTGGGGTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQLGCRF*HWGPEC
Trigger: ACACTCTGGACCCCAATGGCAAAACCTGCAGCCGAG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCTCGGCTGCAGGTTTTaGCATTGGGGTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHLGCRF*HWGPEC
Trigger: ACACTCTGGACCCCAATGGCAAAACCTGCAGCCGAG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTCGGCTGCAGGTTTTaGCATTGGGGTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLGCRF*HWGPEC
Trigger: ACACTCTGGACCCCAATGGCAAAACCTGCAGCCGAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACTCGGCTGCAGGTTTTaGCATTGGGGTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQLGCRF*HWGPEC
Trigger: ACACTCTGGACCCCAATGGCAAAACCTGCAGCCGAG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGTGGTCCACTCGGCTaGAGGTTTTGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISGPLG*RFCHWG
Trigger: ACCCCAATGGCAAAACCTGCAGCCGAGTGGACCACT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQSQPWS*CAQWST
Trigger: AGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSQPWS*CAQWST
Trigger: AGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTGTTCAGACACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGTCTGAACAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTSSHR*GARVPQ
Trigger: CTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGGTGAACACAATGGCTaGTCTGGGCACCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHGEHNG*SGHPCG
Trigger: TCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGGTGAACACAATGGCTaGTCTGGGCACCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIGEHNG*SGHPCG
Trigger: TCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AAGAGATGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGCATGGTGGGTTGATTTaGAGACATCTTACTTCGGCA +
Preference number: 4 (lower is better)
Translates to: KRCLFVGSEAISCSSSSMHGGLI*RHLTSA
Trigger: TGCCGAAGTAAGATGTCTGCAAATCAACCCACCATG...CATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATACAGTGCTGCCATATTaGAGCAGGCCCACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYTVLPY*SRPTRV
Trigger: CACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACAGTGCTGCCATATTaGAGCAGGCCCACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTVLPY*SRPTRV
Trigger: CACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCAGTCATGGTGCCCGTaGACAGATGCCGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYQSWCP*TDAASS
Trigger: AGAGGATGCGGCATCTGTCCACGGGCACCATGACTG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACAGTCATGGTGCCCGTaGACAGATGCCGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLQSWCP*TDAASS
Trigger: AGAGGATGCGGCATCTGTCCACGGGCACCATGACTG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACCTGGCCCACACCAATaGCAAAGATTAGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLPGPHQ*QRLGCP
Trigger: CGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCCTGGCCCACACCAATaGCAAAGATTAGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIPGPHQ*QRLGCP
Trigger: CGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACCTGGCCCACACCAATaGCAAAGATTAGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQPGPHQ*QRLGCP
Trigger: CGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACCTGGCCCACACCAATaGCAAAGATTAGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQPGPHQ*QRLGCP
Trigger: CGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGCCACAAGGAAGACATaGTCCTCATGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQATRKT*SSWGSL
Trigger: GAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATCCTGCTGTGCACAGTaGTCCACTCGGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSSCCAQ*STRLQV
Trigger: AACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHISCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSSCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLSCSQP*SCCAQW
Trigger: CCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCCATGGTCTATAGCTTaGCAGACATCTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSPWSIA*QTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAAGCTATAGACCATGG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGATGTGTTCACAGCCATaGTCTATAGCTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSMCSQP*SIAWQT
Trigger: TGTCTGCCAAGCTATAGACCATGGCTGTGAACACAT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYTCVEY*SSPTRA
Trigger: CGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTCVEY*SSPTRA
Trigger: CGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTGTGTGGACCTGTGTaGAATACTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLCGPV*NTGAAP
Trigger: TGGGGCTGCTCCAGTATTCCACACAGGTCCACACAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCTGTGTGGACCTGTGTaGAATACTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLILCGPV*NTGAAP
Trigger: TGGGGCTGCTCCAGTATTCCACACAGGTCCACACAG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACACAATGGCTGCTCTaGGCACCCTTGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTQWLL*APLWKG
Trigger: CCCTTTCCACAAGGGTGCCCAGAGCAGCCATTGTGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCACACAATGGCTGCTCTaGGCACCCTTGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLITQWLL*APLWKG
Trigger: CCCTTTCCACAAGGGTGCCCAGAGCAGCCATTGTGT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATGGCCTTGGCTTTACTaGCCCACTCGGAGACGTCAT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQWPWLY*PTRRRH
Trigger: ATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGCCA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATGGCCTTGGCTTTACTaGCCCACTCGGAGACGTCAT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQWPWLY*PTRRRH
Trigger: ATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGCCA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTGGCCTTGGCTTTACTaGCCCACTCGGAGACGTCAT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHWPWLY*PTRRRH
Trigger: ATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGCCA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATGGCCTTGGCTTTACTaGCCCACTCGGAGACGTCAT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLWPWLY*PTRRRH
Trigger: ATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGCCA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGAGATGCTTGTTTGTaGGCTCAGAGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSRDACL*AQRQSL
Trigger: AAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGTTAAGAGATGCTTGTTTGTaGGCTCAGAGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: GDFPGLPFSVSFLLSAVLRDACL*AQRQSL
Trigger: AAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCT...TAACACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTGTCACGATCATTATaGCCCGTGGCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLSRSL*PVAHSP
Trigger: GGGAGAATGTGCCACGGGTCATAATGATCGTGACAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACTGTCACGATCATTATaGCCCGTGGCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQLSRSL*PVAHSP
Trigger: GGGAGAATGTGCCACGGGTCATAATGATCGTGACAG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATGGACTTCAAGGTGTTaGAGTCTACCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQWTSRC*SLPGPH
Trigger: GTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATGGACTTCAAGGTGTTaGAGTCTACCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLWTSRC*SLPGPH
Trigger: GTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTGGACTTCAAGGTGTTaGAGTCTACCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHWTSRC*SLPGPH
Trigger: GTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQMSQGC*CRSGHS
Trigger: ACTGTGCCCACTTCTGCATCAACATCCCTGGCTCAT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLMSQGC*CRSGHS
Trigger: ACTGTGCCCACTTCTGCATCAACATCCCTGGCTCAT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGCACCTGCAGACGTATaGGCCAGGGATGTTGATGCA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYAPADV*ARDVDA
Trigger: TGCATCAACATCCCTGGCTCATACGTCTGCAGGTGC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGCACCTGCAGACGTATaGGCCAGGGATGTTGATGCA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLAPADV*ARDVDA
Trigger: TGCATCAACATCCCTGGCTCATACGTCTGCAGGTGC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACATCCGTGGTTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTSVVF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAACCACGGATGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAACATCCGTGGTTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQTSVVF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAACCACGGATGT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSSPPC*RTHAHS
Trigger: GCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLSSPPC*RTHAHS
Trigger: GCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGATGAGGAAGCCTTCTaGGCACTGGCAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLDEEAF*ALADEG
Trigger: TCCTTCGTCTGCCAGTGCTCAGAAGGCTTCCTCATC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGATGAGGAAGCCTTCTaGGCACTGGCAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYDEEAF*ALADEG
Trigger: TCCTTCGTCTGCCAGTGCTCAGAAGGCTTCCTCATC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSCPSGH*QAKDLS
Trigger: GGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCTTTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGCAGCCATGGTGGGTTaGTTTGCAGACATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AFTKPSNILMQVSLYVWAAAMVG*FADILP
Trigger: AGGAAGGATGTCTGCAAATCAACCCACCATGGCTGC...AGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGCAGCCATGGTGGGTTaGTTTGCAGACATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQAAMVG*FADILP
Trigger: AGGAAGGATGTCTGCAAATCAACCCACCATGGCTGC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGCAGCCATGGTGGGTTaGTTTGCAGACATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQAAMVG*FADILP
Trigger: AGGAAGGATGTCTGCAAATCAACCCACCATGGCTGC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGTTATGCTCCAGGGTaGTGCACATATGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLSYAPG*CTYGPC
Trigger: GCACGGCCCATATGTGCAGCACCCTGGAGCATAACT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAGCCTTGTTTGCACCTaGAGACGTATGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSLVCT*RRMSQG
Trigger: TCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGCCTTGTTTGCACCTaGAGACGTATGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISLVCT*RRMSQG
Trigger: TCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAGCCTTGTTTGCACCTaGAGACGTATGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQSLVCT*RRMSQG
Trigger: TCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTAGTGGTCCACTCGGCTaGAGGTTTTGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHISGPLG*RFCHWG
Trigger: ACCCCAATGGCAAAACCTGCAGCCGAGTGGACCACT...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAGTGGTCCACTCGGCTaGAGGTTTTGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSGPLG*RFCHWG
Trigger: ACCCCAATGGCAAAACCTGCAGCCGAGTGGACCACT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSQPWS*CAQWST
Trigger: AGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATCACAGCCATGGTCCTaGTGTGCACAGTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSSQPWS*CAQWST
Trigger: AGTGGACCACTGTGCACAGCAGGACCATGGCTGTGA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAGTGTTCAGACACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGTCTGAACAC...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTGTTCAGACACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGTCTGAACAC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTCCTACCCCAACAGCATACCAAACGAATCTTCACTaGTTACACACGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: EAISCSSSSMAFPTPTAYQTNLH*LHTNVH
Trigger: GTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTG...GTATGCTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGATCCCTCTGAGCATTTaGAGATGTAGGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSIPLSI*RCRNSH
Trigger: ATGGGAATTCCTACATCTGCAAATGCTCAGAGGGAT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGGTGAACACAATGGCTaGTCTGGGCACCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSGEHNG*SGHPCG
Trigger: TCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGGTGAACACAATGGCTaGTCTGGGCACCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLGEHNG*SGHPCG
Trigger: TCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATGTTCAGGGCATACTaGATGGCCAGCCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHMFRAY*MASPVM
Trigger: CATGACTGGGCTGGCCATCCAGTATGCCCTGAACAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCATGTTCAGGGCATACTaGATGGCCAGCCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIMFRAY*MASPVM
Trigger: CATGACTGGGCTGGCCATCCAGTATGCCCTGAACAT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGATCATTATGACCCGTaGCACATTCTCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIDHYDP*HILPQG
Trigger: CCCCTGAGGGAGAATGTGCCACGGGTCATAATGATC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGATCATTATGACCCGTaGCACATTCTCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHDHYDP*HILPQG
Trigger: CCCCTGAGGGAGAATGTGCCACGGGTCATAATGATC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGATCATTATGACCCGTaGCACATTCTCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQDHYDP*HILPQG
Trigger: CCCCTGAGGGAGAATGTGCCACGGGTCATAATGATC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCTGGCCCACACCAATaGCAAAGATTAGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPGPHQ*QRLGCP
Trigger: CGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAAGACATGGTCCTCATaGGGCTCACTCCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQKTWSS*GSLPMD
Trigger: GTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAAGACATGGTCCTCATaGGGCTCACTCCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIKTWSS*GSLPMD
Trigger: GTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGCCACAAGGAAGACATaGTCCTCATGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLATRKT*SSWGSL
Trigger: GAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGCCACAAGGAAGACATaGTCCTCATGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRATRKT*SSWGSL
Trigger: GAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGCCACAAGGAAGACATaGTCCTCATGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYATRKT*SSWGSL
Trigger: GAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTGCACAACTTCTTCTaGAACACGGAGGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVHNFF*NTEVSV
Trigger: GACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGTGCACAACTTCTTCTaGAACACGGAGGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIVHNFF*NTEVSV
Trigger: GACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCAC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGTGCACAACTTCTTCTaGAACACGGAGGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHVHNFF*NTEVSV
Trigger: GACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCAC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAAGGGTGCTGCACATATaGGCCGTGCACAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLRVLHI*AVHNFF
Trigger: GAAGAAGTTGTGCACGGCCCATATGTGCAGCACCCT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAGCTGCTCACAGTTGTaGTCCTCCATGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSCSQL*SSMAHR
Trigger: TCTGTGTGCCATGGAGGACCACAACTGTGAGCAGCT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAAGCTGCTCACAGTTGTaGTCCTCCATGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLSCSQL*SSMAHR
Trigger: TCTGTGTGCCATGGAGGACCACAACTGTGAGCAGCT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLICRFCH*GPECSH
Trigger: GTGGCTACACTCTGGACCCCAATGGCAAAACCTGCA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQCRFCH*GPECSH
Trigger: GTGGCTACACTCTGGACCCCAATGGCAAAACCTGCA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAAGCCTTCTGAGCACTaGCAGACGAAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQKPSEH*QTKESS
Trigger: GGAGGATTCCTTCGTCTGCCAGTGCTCAGAAGGCTT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGCCTTCTGAGCACTaGCAGACGAAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHKPSEH*QTKESS
Trigger: GGAGGATTCCTTCGTCTGCCAGTGCTCAGAAGGCTT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAAGCCTTCTGAGCACTaGCAGACGAAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIKPSEH*QTKESS
Trigger: GGAGGATTCCTTCGTCTGCCAGTGCTCAGAAGGCTT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIECSQP*SPRAQE
Trigger: CTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQECSQP*SPRAQE
Trigger: CTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQECSQP*SPRAQE
Trigger: CTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCG +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTCVEY*SSPTRA
Trigger: CGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTGTGTGGACCTGTGTaGAATACTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLLCGPV*NTGAAP
Trigger: TGGGGCTGCTCCAGTATTCCACACAGGTCCACACAG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCTGTGTGGACCTGTGTaGAATACTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYLCGPV*NTGAAP
Trigger: TGGGGCTGCTCCAGTATTCCACACAGGTCCACACAG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAACACAATGGCTGCTCTaGGCACCCTTGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAETQWLL*APLWKG
Trigger: CCCTTTCCACAAGGGTGCCCAGAGCAGCCATTGTGT...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACACAATGGCTGCTCTaGGCACCCTTGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTQWLL*APLWKG
Trigger: CCCTTTCCACAAGGGTGCCCAGAGCAGCCATTGTGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACACAATGGCTGCTCTaGGCACCCTTGTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTQWLL*APLWKG
Trigger: CCCTTTCCACAAGGGTGCCCAGAGCAGCCATTGTGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTGGCCTTGGCTTTACTaGCCCACTCGGAGACGTCAT +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHIWPWLY*PTRRRH
Trigger: ATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGCCA...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATGGCAGTTCCCCTGCTaGAGAGTCCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRWQFPC*RVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHLLDRF*QFPCWR
Trigger: TCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQLLDRF*QFPCWR
Trigger: TCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TCCTCAATGGCTTTTCCTACCCCAACAGCATACATAGTGATACTCTTGCACCGTCAGGAAAGTAGGTCTTaGATATTTATGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SSMAFPTPTAYIVILLHRQESRS*IFMVTG
Trigger: GCCAGTCACCATAAATATCCAAGACCTACTTTCCTG...ACGGTGCAAGAGTATCACTATGTATGCTGTTGGGGTAGGAAAAGCCATTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCAGGAAAGTAGGTCTTaGATATTTATGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSQESRS*IFMVTG
Trigger: GCCAGTCACCATAAATATCCAAGACCTACTTTCCTG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCTTGTCTTTGTTCTGTaGCAAACCAGGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSLVFVL*QTRFLS
Trigger: ACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACATAGTCATGGGTGTTaGCACTGCGAGAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLHSHGC*HCESCQ
Trigger: TTGACAGCTCTCGCAGTGTCAACACCCATGACTATG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACTGTCACGATCATTATaGCCCGTGGCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSLSRSL*PVAHSP
Trigger: GGGAGAATGTGCCACGGGTCATAATGATCGTGACAG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACTGTCACGATCATTATaGCCCGTGGCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRLSRSL*PVAHSP
Trigger: GGGAGAATGTGCCACGGGTCATAATGATCGTGACAG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAATGGACTTCAAGGTGTTaGAGTCTACCTGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEWTSRC*SLPGPH
Trigger: GTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCA...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGCGTCTCAATCTGGCTaGAATTGGCCACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHASQSG*NWPQGR
Trigger: TCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGCGTCTCAATCTGGCTaGAATTGGCCACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQASQSG*NWPQGR
Trigger: TCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRMSQGC*CRSGHS
Trigger: ACTGTGCCCACTTCTGCATCAACATCCCTGGCTCAT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSMSQGC*CRSGHS
Trigger: ACTGTGCCCACTTCTGCATCAACATCCCTGGCTCAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAACATCCGTGGTTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSTSVVF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAACCACGGATGT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACATCCGTGGTTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTSVVF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAACCACGGATGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLSSPPC*RTHAHS
Trigger: GCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGCACTCGCACGTGTATaGGTCATCACTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIALARV*VITVHT
Trigger: TGTGTGAACAGTGATGACTCATACACGTGCGAGTGC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGCAGCCATGGTGGGTTaGTTTGCAGACATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYAAMVG*FADILP
Trigger: AGGAAGGATGTCTGCAAATCAACCCACCATGGCTGC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTTTCATGTCTTTGGCTaGGTTGAAGTTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSFHVFG*VEVSQS
Trigger: ACTCTGAGAAACTTCAACTCAGCCAAAGACATGAAA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACATCCGTGGTTTTCTaGGGCACAGTAGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTSVVF*GTVVHS
Trigger: ACTGTGGACTACTGTGCCTCAGAAAACCACGGATGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS-3UTR GCA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACGATGAAAACCAGGTCTaGCCGCTTGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYDENQV*PLVLTG
Trigger: TCCTGTGAGAACAAGCGGGCAGACCTGGTTTTCATC...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGATGAAAACCAGGTCTaGCCGCTTGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQDENQV*PLVLTG
Trigger: TCCTGTGAGAACAAGCGGGCAGACCTGGTTTTCATC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGATGAAAACCAGGTCTaGCCGCTTGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLDENQV*PLVLTG
Trigger: TCCTGTGAGAACAAGCGGGCAGACCTGGTTTTCATC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAGCCTTGTTTGCACCTaGAGACGTATGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSLVCT*RRMSQG
Trigger: TCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACATTCACACAGAGCTaGTCACAGTTGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTFTQS*SQLWSS
Trigger: GGAGGACCACAACTGTGAGCAGCTCTGTGTGAATGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAATGTTGACGCACTCATaGTCACAGCCCGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQMLTHS*SQPGLF
Trigger: GAACAAACCGGGCTGTGAGCATGAGTGCGTCAACAT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCATGTTGACGCACTCATaGTCACAGCCCGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIMLTHS*SQPGLF
Trigger: GAACAAACCGGGCTGTGAGCATGAGTGCGTCAACAT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATGTTGACGCACTCATaGTCACAGCCCGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHMLTHS*SQPGLF
Trigger: GAACAAACCGGGCTGTGAGCATGAGTGCGTCAACAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCTCGGCTGCAGGTTTTaGCATTGGGGTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLLGCRF*HWGPEC
Trigger: ACACTCTGGACCCCAATGGCAAAACCTGCAGCCGAG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGTGTTCAGACACAGCTaGTCACAGCCATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLVFRHS*SQPWSC
Trigger: GCAGGACCATGGCTGTGAGCAGCTGTGTCTGAACAC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCATGGTGGGTTGATTTaGAGACATCCTTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHHGGLI*RHPSFG
Trigger: GCCGAAGGAAGGATGTCTGCAAATCAACCCACCATG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACATGGTGGGTTGATTTaGAGACATCCTTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQHGGLI*RHPSFG
Trigger: GCCGAAGGAAGGATGTCTGCAAATCAACCCACCATG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GAACAGGAAAGTAGGTCTTGGATATTTATGGTGACTGGCTCAGATTCTGTTGGCATCCCTCTGAGCATTTaGAGATGTAGGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: EQESRSWIFMVTGSDSVGIPLSI*RCRNSH
Trigger: ATGGGAATTCCTACATCTGCAAATGCTCAGAGGGAT...GCCAACAGAATCTGAGCCAGTCACCATAAATATCCAAGACCTACTTTCCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTTCAGTGCATTTCTTaGACCGTCTTCCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLQCIS*TVFRPQ
Trigger: CTGAGGACGGAAGACGGTGCAAGAAATGCACTGAAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACTTCAGTGCATTTCTTaGACCGTCTTCCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQLQCIS*TVFRPQ
Trigger: CTGAGGACGGAAGACGGTGCAAGAAATGCACTGAAG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCTTCAGTGCATTTCTTaGACCGTCTTCCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLILQCIS*TVFRPQ
Trigger: CTGAGGACGGAAGACGGTGCAAGAAATGCACTGAAG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGGTGAACACAATGGCTaGTCTGGGCACCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLGEHNG*SGHPCG
Trigger: TCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATTTTGGCAGTTCCCCTaGTGGAGAGTCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSFWQFP*WRVLSS
Trigger: GGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGATGTTCAGGGCATACTaGATGGCCAGCCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLMFRAY*MASPVM
Trigger: CATGACTGGGCTGGCCATCCAGTATGCCCTGAACAT...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATATGTTCAGGGCATACTaGATGGCCAGCCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYMFRAY*MASPVM
Trigger: CATGACTGGGCTGGCCATCCAGTATGCCCTGAACAT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAGATCATTATGACCCGTaGCACATTCTCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEDHYDP*HILPQG
Trigger: CCCCTGAGGGAGAATGTGCCACGGGTCATAATGATC...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHVLKST*PTPMAK
Trigger: CTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACAC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVLKST*PTPMAK
Trigger: CTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQVLKST*PTPMAK
Trigger: CTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACAC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAAGACATGGTCCTCATaGGGCTCACTCCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLKTWSS*GSLPMD
Trigger: GTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVSVSI*LKLATR
Trigger: CCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLVSVSI*LKLATR
Trigger: CCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGAC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGTGCACAACTTCTTCTaGAACACGGAGGTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRVHNFF*NTEVSV
Trigger: GACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCAC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGTTGTGGTCCTCCATaGCACACAGATCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISCGPP*HTDPGF
Trigger: GAATCCAGGATCTGTGTGCCATGGAGGACCACAACT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAGTTGTGGTCCTCCATaGCACACAGATCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSCGPP*HTDPGF
Trigger: GAATCCAGGATCTGTGTGCCATGGAGGACCACAACT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGCTGCTCACAGTTGTaGTCCTCCATGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLSCSQL*SSMAHR
Trigger: TCTGTGTGCCATGGAGGACCACAACTGTGAGCAGCT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGCAGGTTTTCTTATCTaGATTCAGGGTAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSAGFLI*IQGKAF
Trigger: AAAGGCTTTACCCTGAATCCAGATAAGAAAACCTGC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLCRFCH*GPECSH
Trigger: GTGGCTACACTCTGGACCCCAATGGCAAAACCTGCA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSCRFCH*GPECSH
Trigger: GTGGCTACACTCTGGACCCCAATGGCAAAACCTGCA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAAGCCTTCTGAGCACTaGCAGACGAAGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLKPSEH*QTKESS
Trigger: GGAGGATTCCTTCGTCTGCCAGTGCTCAGAAGGCTT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYECSQP*SPRAQE
Trigger: CTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLCSQPW*VDLQTS
Trigger: GGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLICSQPW*VDLQTS
Trigger: GGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACCCACTCGAGCGGCTTTaGGGGAAATTGTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYPLERL*GKLSRN
Trigger: ATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGG...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACCACTCGAGCGGCTTTaGGGGAAATTGTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLPLERL*GKLSRN
Trigger: ATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACCACTCGAGCGGCTTTaGGGGAAATTGTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQPLERL*GKLSRN
Trigger: ATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSLLDRF*QFPCWR
Trigger: TCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRLLDRF*QFPCWR
Trigger: TCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAGCGTCTCAATCTGGCTaGAATTGGCCACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEASQSG*NWPQGR
Trigger: TCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGC...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGCGTCTCAATCTGGCTaGAATTGGCCACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYASQSG*NWPQGR
Trigger: TCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACATCCGTGGTTTTCTaGGGCACAGTAGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTSVVF*GTVVHS
Trigger: GCTGTGGACTACTGTGCCTCAGAAAACCACGGATGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTGCACTCGCACGTGTATaGGTCATCACTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHIALARV*VITVHT
Trigger: TGTGTGAACAGTGATGACTCATACACGTGCGAGTGC...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGCACTCGCACGTGTATaGGTCATCACTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRALARV*VITVHT
Trigger: TGTGTGAACAGTGATGACTCATACACGTGCGAGTGC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGCACTCGCACGTGTATaGGTCATCACTGTTCACACA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSALARV*VITVHT
Trigger: TGTGTGAACAGTGATGACTCATACACGTGCGAGTGC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGCAGCCATGGTGGGTTaGTTTGCAGACATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLAAMVG*FADILP
Trigger: AGGAAGGATGTCTGCAAATCAACCCACCATGGCTGC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: YRCSTFLYMRCCISVVWIDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCAGGTTTCTCAGTACTaGTTGTTTTACTTCACAACA +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSQVSQY*LFYFTT
Trigger: TGTTGTGAAGTAAAACAATCAGTACTGAGAAACCTG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYHTKAG*GRSKLC
Trigger: ACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLHTKAG*GRSKLC
Trigger: ACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRHTKAG*GRSKLC
Trigger: ACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACACACTAAGGCAGGATaGGGCAGAAGCAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSHTKAG*GRSKLC
Trigger: ACACAACTTGCTTCTGCCTCATCCTGCCTTAGTGTG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGATGAAAACCAGGTCTaGCCGCTTGTTCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLDENQV*PLVLTG
Trigger: TCCTGTGAGAACAAGCGGGCAGACCTGGTTTTCATC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTGCACATATGGGCCGTaGACAACTTCTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHCTYGP*TTSSGT
Trigger: TGTTCCAGAAGAAGTTGTGCACGGCCCATATGTGCA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATGCACATATGGGCCGTaGACAACTTCTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQCTYGP*TTSSGT
Trigger: TGTTCCAGAAGAAGTTGTGCACGGCCCATATGTGCA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGAATGTAGCCTTGTTTaGACCTGCAGACGTATGAGC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIECSLV*TCRRMS
Trigger: GCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGAATGTAGCCTTGTTTaGACCTGCAGACGTATGAGC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLECSLV*TCRRMS
Trigger: GCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACAGATCCTGGATTCTaGAAGTCGTCTGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTDPGF*KSSDPS
Trigger: ACTCGGATCAGACGACTTGCAGAATCCAGGATCTGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACAGATCCTGGATTCTaGAAGTCGTCTGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTDPGF*KSSDPS
Trigger: ACTCGGATCAGACGACTTGCAGAATCCAGGATCTGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATACATTCACACAGAGCTaGTCACAGTTGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYTFTQS*SQLWSS
Trigger: GGAGGACCACAACTGTGAGCAGCTCTGTGTGAATGT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGCCCGGTTTGTTCAGTaGACAGTAGTTGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQARFVQ*TVVDPS
Trigger: AGAAGGATCAACTACTGTGCACTGAACAAACCGGGC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATGTTGACGCACTCATaGTCACAGCCCGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSMLTHS*SQPGLF
Trigger: GAACAAACCGGGCTGTGAGCATGAGTGCGTCAACAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATATGTTGACGCACTCATaGTCACAGCCCGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYMLTHS*SQPGLF
Trigger: GAACAAACCGGGCTGTGAGCATGAGTGCGTCAACAT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACATGGTGGGTTGATTTaGAGACATCCTTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLHGGLI*RHPSFG
Trigger: GCCGAAGGAAGGATGTCTGCAAATCAACCCACCATG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACATGGTGGGTTGATTTaGAGACATCCTTCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSHGGLI*RHPSFG
Trigger: GCCGAAGGAAGGATGTCTGCAAATCAACCCACCATG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACTTCAGTGCATTTCTTaGACCGTCTTCCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRLQCIS*TVFRPQ
Trigger: CTGAGGACGGAAGACGGTGCAAGAAATGCACTGAAG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACAATTGGGCCTTCAGTaGATTTCTTGCACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQQLGLQ*ISCTVF
Trigger: GAAGACGGTGCAAGAAATGCACTGAAGGCCCAATTG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCAATTGGGCCTTCAGTaGATTTCTTGCACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIQLGLQ*ISCTVF
Trigger: GAAGACGGTGCAAGAAATGCACTGAAGGCCCAATTG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAGTAGTCCACAGTTCTaGAAGTCGTCTGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQSSPQF*KSSDPS
Trigger: ACTCGGATCAGACGACTTGCAGAACTGTGGACTACT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYVLKST*PTPMAK
Trigger: CTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACAC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSVLKST*PTPMAK
Trigger: CTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACAC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLVSVSI*LKLATR
Trigger: CCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGAC...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRVSVSI*LKLATR
Trigger: CCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGAC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGAGGGTGCTGCACATATaGGCCGTGCACAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLRVLHI*AVHNFF
Trigger: GAAGAAGTTGTGCACGGCCCATATGTGCAGCACCCT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQMLMQK*AQLCSR
Trigger: CCTGGAGCATAACTGTGCCCACTTCTGCATCAACAT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIMLMQK*AQLCSR
Trigger: CCTGGAGCATAACTGTGCCCACTTCTGCATCAACAT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAAGTTGTGGTCCTCCATaGCACACAGATCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSSCGPP*HTDPGF
Trigger: GAATCCAGGATCTGTGTGCCATGGAGGACCACAACT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATAGTTGTGGTCCTCCATaGCACACAGATCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYSCGPP*HTDPGF
Trigger: GAATCCAGGATCTGTGTGCCATGGAGGACCACAACT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLCRFCH*GPECSH
Trigger: GTGGCTACACTCTGGACCCCAATGGCAAAACCTGCA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GACCGTAAAAGATTGTCTTCTTCAAACAGATATCTGTGTTGCACTGCAAAATTAGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: DRKRLSSSNRYLCCTAKLECSQP*SPRAQE
Trigger: CTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTC...TAATTTTGCAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRCSQPW*VDLQTS
Trigger: GGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLCSQPW*VDLQTS
Trigger: GGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSCSQPW*VDLQTS
Trigger: GGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACCACTCGAGCGGCTTTaGGGGAAATTGTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRPLERL*GKLSRN
Trigger: ATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCACTCGAGCGGCTTTaGGGGAAATTGTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPLERL*GKLSRN
Trigger: ATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGAGTGAACTCTGTGTaGACCTGTGTGGAATACTGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIRVNSV*TCVEYW
Trigger: CCAGTATTCCACACAGGTCCACACAGAGTTCACTCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAGAGTGAACTCTGTGTaGACCTGTGTGGAATACTGG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQRVNSV*TCVEYW
Trigger: CCAGTATTCCACACAGGTCCACACAGAGTTCACTCT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTGGCCCCTTCTCCTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLAPSP*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGGAGAAGGGGCCAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGATTCTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIDSVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGAATC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGATTCTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQDSVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGAATC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTGGCTCAGATTCTGTTaGCTGTTGGACCGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIWLRFC*LLDRFW
Trigger: CCAAAAACGGTCCAACAGCCAACAGAATCTGAGCCA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: CLFVGSEAISCSSSSMAFEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...AAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATGTTGATGCAGAAGTaGGCACAGTTATGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLMLMQK*AQLCST
Trigger: GGTGGAGCATAACTGTGCCCACTTCTGCATCAACAT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522025.6
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTCTCATCCATTGTGCTaGAGTCTTCGGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLISHPLC*SLRHRR
Trigger: TCTTCTATGCCGAAGACTTCAGCACAATGGATGAGA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGATTTAACAATAGCCTaGGCTTTGGGGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSDLTIA*ALGLCT
Trigger: AGTGCAGAGCCCCAAAGCTCAGGCTATTGTTAAATC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATGCACATATGGGCCGTaGACAACTTCTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLCTYGP*TTSSGT
Trigger: TGTTCCAGAAGAAGTTGTGCACGGCCCATATGTGCA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR GCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGGAATGTAGCCTTGTTTaGACCTGCAGACGTATGAGC +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLECSLV*TCRRMS
Trigger: GCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGAATGTAGCCTTGTTTaGACCTGCAGACGTATGAGC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRECSLV*TCRRMS
Trigger: GCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGAATGTAGCCTTGTTTaGACCTGCAGACGTATGAGC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSECSLV*TCRRMS
Trigger: GCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACAGATCCTGGATTCTaGAAGTCGTCTGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTDPGF*KSSDPS
Trigger: ACTCGGATCAGACGACTTGCAGAATCCAGGATCTGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGCCCGGTTTGTTCAGTaGACAGTAGTTGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRARFVQ*TVVDPS
Trigger: AGAAGGATCAACTACTGTGCACTGAACAAACCGGGC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGCCCGGTTTGTTCAGTaGACAGTAGTTGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSARFVQ*TVVDPS
Trigger: AGAAGGATCAACTACTGTGCACTGAACAAACCGGGC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGATGTTGACGCACTCATaGTCACAGCCCGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLMLTHS*SQPGLF
Trigger: GAACAAACCGGGCTGTGAGCATGAGTGCGTCAACAT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCAATTGGGCCTTCAGTaGATTTCTTGCACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYQLGLQ*ISCTVF
Trigger: GAAGACGGTGCAAGAAATGCACTGAAGGCCCAATTG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TCCTCAATGGCTTTTCCTACCCCAACAGCATACATAGTGATACTCTTGCACCGTAACAGATATCTGTGTTaGACTGCAAAATTAGAACAG +
Preference number: 4 (lower is better)
Translates to: SSMAFPTPTAYIVILLHRNRYLC*TAKLEQ
Trigger: CTGTTCTAATTTTGCAGTGCAACACAGATATCTGTT...ACGGTGCAAGAGTATCACTATGTATGCTGTTGGGGTAGGAAAAGCCATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR GCA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCTTACTTCTTCGTTTaGAAGGTTCTGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSYFFV*KVLEHY
Trigger: ATAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTTCTTACTTCTTCGTTTaGAAGGTTCTGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: CLFVGSEAISCSSSSMAFSYFFV*KVLEHY
Trigger: ATAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGA...AAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR GCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGCACATTCCTGTACATaGGGTGTTGTATTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIAHSCT*GVVFLW
Trigger: CCACAGAAATACAACACCGCATGTACAGGAATGTGC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAACAGATATCTGTGTTaGACTGTTGGCTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQNRYLC*TVGCWT
Trigger: GGTCCAACAGCCAACAGTGCAACACAGATATCTGTT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGCCCGGTTTGTTCAGTaGACAGTAGTTGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLARFVQ*TVVDPC
Trigger: ACAAGGATCAACTACTGTGCACTGAACAAACCGGGC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524308.5
CDS-3UTR CCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLMLMQK*AQLCSR
Trigger: CCTGGAGCATAACTGTGCCCACTTCTGCATCAACAT...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSMLMQK*AQLCSR
Trigger: CCTGGAGCATAACTGTGCCCACTTCTGCATCAACAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACCATGGTCTATAGCTTaGCAGACATCTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQPWSIA*QTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAAGCTATAGACCATGG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGTGTTCACAGCCATaGTCTATAGCTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQMCSQP*SIAWQT
Trigger: TGTCTGCCAAGCTATAGACCATGGCTGTGAACACAT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATGTGTTCACAGCCATaGTCTATAGCTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHMCSQP*SIAWQT
Trigger: TGTCTGCCAAGCTATAGACCATGGCTGTGAACACAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTGTTCGCAGCCATGGTaGGTTGATTTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLCSQPW*VDLQTS
Trigger: GGATGTCTGCAAATCAACCCACCATGGCTGCGAACA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TGGGAAAGCTTTTGTGTAGACCGTAAAAGATTGTCTTCTTCAAACAGATATCTGATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: WESFCVDRKRLSSSNRYLMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...CAGATATCTGTTTGAAGAAGACAATCTTTTACGGTCTACACAAAAGCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATGTGTTCGCAGCCATaGTGGGTTGATTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSMCSQP*WVDLQT
Trigger: TGTCTGCAAATCAACCCACCATGGCTGCGAACACAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCCACTCGAGCGGCTTTaGGGGAAATTGTCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLPLERL*GKLSRN
Trigger: ATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAAGAGTGAACTCTGTGTaGACCTGTGTGGAATACTGG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSRVNSV*TCVEYW
Trigger: CCAGTATTCCACACAGGTCCACACAGAGTTCACTCT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAACTGGCCCCTTCTCCTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAELAPSP*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGGAGAAGGGGCCAG...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCTGGCCCCTTCTCCTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYLAPSP*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGGAGAAGGGGCCAG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTGGCCCCTTCTCCTTaGGTAAAACTTCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLLAPSP*VKLLSN
Trigger: GTTTGAGAGAAGTTTTACCCAAGGAGAAGGGGCCAG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGAGATGCTTGTTTGTaGGCTCAGAGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIRDACL*AQRQSL
Trigger: AAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAAGAGATGCTTGTTTGTaGGCTCAGAGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLRDACL*AQRQSL
Trigger: AAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAGAGATGCTTGTTTGTaGGCTCAGAGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQRDACL*AQRQSL
Trigger: AAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGATTCTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLDSVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGAATC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATGGCTCAGATTCTGTTaGCTGTTGGACCGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSWLRFC*LLDRFW
Trigger: CCAAAAACGGTCCAACAGCCAACAGAATCTGAGCCA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATGGCTCAGATTCTGTTaGCTGTTGGACCGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRWLRFC*LLDRFW
Trigger: CCAAAAACGGTCCAACAGCCAACAGAATCTGAGCCA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTTCGTTTGCAAGGTTCTaGAACATTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: CLFVGSEAISCSSSSMAFSFARF*NIIRFS
Trigger: TGAAAACCTTATAATGTTCCAGAACCTTGCAAACGA...AAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTGCACTGTTGGCTGTTaGACCGTTTTTGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLCTVGC*TVFGSS
Trigger: GGAACTGCCAAAAACGGTCCAACAGCCAACAGTGCA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATCTGTGTTGCACTGTTaGCTGTTGGACCGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLSVLHC*LLDRFW
Trigger: CCAAAAACGGTCCAACAGCCAACAGTGCAACACAGA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCACATCCGTGATTAGATaGGGCACAGTAGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLITSVIR*GTVVYL
Trigger: AAGATAGACTACTGTGCCTCATCTAATCACGGATGT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACACATCCGTGATTAGATaGGGCACAGTAGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHTSVIR*GTVVYL
Trigger: AAGATAGACTACTGTGCCTCATCTAATCACGGATGT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAAGGATCTGTCCATGTTaGCACAGGAGTATTCACAAC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSRICPC*HRSIHN
Trigger: GTTGTGAATACTCCTGTGTCAACATGGACAGATCCT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATCTCATCCATTGTGCTaGAGTCTTCGGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSSHPLC*SLRHRR
Trigger: TCTTCTATGCCGAAGACTTCAGCACAATGGATGAGA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTCTCATCCATTGTGCTaGAGTCTTCGGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYSHPLC*SLRHRR
Trigger: TCTTCTATGCCGAAGACTTCAGCACAATGGATGAGA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATCTCATCCATTGTGCTaGAGTCTTCGGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSHPLC*SLRHRR
Trigger: TCTTCTATGCCGAAGACTTCAGCACAATGGATGAGA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACTTGGATATTTATGGTaGCTGGCTCAGATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQLGYLW*LAQILL
Trigger: CAACAGAATCTGAGCCAGTCACCATAAATATCCAAG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCAGCAGAAAGCAGCCTaGGAGCATCTTTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYQQKAA*EHLFHF
Trigger: AAAATGGAAAAGATGCTCGCAGGCTGCTTTCTGCTG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTGCACATATGGGCCGTaGACAACTTCTTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLCTYGP*TTSSGT
Trigger: TGTTCCAGAAGAAGTTGTGCACGGCCCATATGTGCA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACAGATCCTGGATTCTaGAAGTCGTCTGATCCGAGT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTDPGF*KSSDPS
Trigger: ACTCGGATCAGACGACTTGCAGAATCCAGGATCTGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGCCCGGTTTGTTCAGTaGACAGTAGTTGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLARFVQ*TVVDPS
Trigger: AGAAGGATCAACTACTGTGCACTGAACAAACCGGGC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATCCCTCTGAGCATTTaGAGATGTAGGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHIPLSI*RCRNSH
Trigger: ATGGGAATTCCTACATCTGCAAATGCTCAGAGGGAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATCCCTCTGAGCATTTaGAGATGTAGGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQIPLSI*RCRNSH
Trigger: ATGGGAATTCCTACATCTGCAAATGCTCAGAGGGAT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCAATTGGGCCTTCAGTaGATTTCTTGCACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLQLGLQ*ISCTVF
Trigger: GAAGACGGTGCAAGAAATGCACTGAAGGCCCAATTG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAACAGATATCTGTGTTaGACTGTTGGCTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRNRYLC*TVGCWT
Trigger: GGTCCAACAGCCAACAGTGCAACACAGATATCTGTT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS-3UTR CCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAACCATGGTCTATAGCTTaGCAGACATCTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEPWSIA*QTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAAGCTATAGACCATGG...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCATGGTCTATAGCTTaGCAGACATCTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPWSIA*QTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAAGCTATAGACCATGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATGTGTTCACAGCCATaGTCTATAGCTTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSMCSQP*SIAWQT
Trigger: TGTCTGCCAAGCTATAGACCATGGCTGTGAACACAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCTTCTCCAAGACTCTTaGATCCATCGATCACAAAGA +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLILLQDS*IHRSQR
Trigger: TCTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCTTCTCCAAGACTCTTaGATCCATCGATCACAAAGA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHLLQDS*IHRSQR
Trigger: TCTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGGTAGTTCCTCCTCAATaGCTTTTCCTACCCCAACAG +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLVVPPQ*LFLPQQ
Trigger: CTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTAC...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGAGATGCTTGTTTGTaGGCTCAGAGGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLRDACL*AQRQSL
Trigger: AAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GACCGTAAAAGATTGTCTTCTTCAAACAGATATCTGTGTTGCACTGCAAAATTATGGCTCAGATTCTGTTaGCTGTTGGACCGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DRKRLSSSNRYLCCTAKLWLRFC*LLDRFW
Trigger: CCAAAAACGGTCCAACAGCCAACAGAATCTGAGCCA...TAATTTTGCAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CCA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACCAGGAAAGTAGGTCTTaGATATTTATGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYQESRS*IFMVTG
Trigger: GCCAGTCACCATAAATATCCAAGACCTACTTTCCTG...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACAGGAAAGTAGGTCTTaGATATTTATGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQQESRS*IFMVTG
Trigger: GCCAGTCACCATAAATATCCAAGACCTACTTTCCTG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACTTGTCTTTGTTCTGTaGCAAACCAGGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLLVFVL*QTRFLS
Trigger: ACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCTTGTCTTTGTTCTGTaGCAAACCAGGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLILVFVL*QTRFLS
Trigger: ACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTCTGTGTTGCACTGTTaGCTGTTGGACCGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLSVLHC*LLDRFW
Trigger: CCAAAAACGGTCCAACAGCCAACAGTGCAACACAGA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS-3UTR TCA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAACATCCGTGATTAGATaGGGCACAGTAGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: FTKPSNILMQVSLYVWAETSVIR*GTVVYL
Trigger: AAGATAGACTACTGTGCCTCATCTAATCACGGATGT...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACATCCGTGATTAGATaGGGCACAGTAGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTSVIR*GTVVYL
Trigger: AAGATAGACTACTGTGCCTCATCTAATCACGGATGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR TCA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACTTTCATGTCTTTGGCTaGGTTGAAGTTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYFHVFG*VEVSQS
Trigger: ACTCTGAGAAACTTCAACTCAGCCAAAGACATGAAA...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTTTCATGTCTTTGGCTaGGTTGAAGTTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIFHVFG*VEVSQS
Trigger: ACTCTGAGAAACTTCAACTCAGCCAAAGACATGAAA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATTTCATGTCTTTGGCTaGGTTGAAGTTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQFHVFG*VEVSQS
Trigger: ACTCTGAGAAACTTCAACTCAGCCAAAGACATGAAA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTGGATATTTATGGTaGCTGGCTCAGATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLLGYLW*LAQILL
Trigger: CAACAGAATCTGAGCCAGTCACCATAAATATCCAAG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACTTGGATATTTATGGTaGCTGGCTCAGATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRLGYLW*LAQILL
Trigger: CAACAGAATCTGAGCCAGTCACCATAAATATCCAAG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GCTTTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTTATCGTATAGTCAAATaGGATTGCACACTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFTKPSNILMQVSLYVWAYRIVK*DCTLRQ
Trigger: CTGCCTTAGTGTGCAATCTCATTTGACTATACGATA...AGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATATCGTATAGTCAAATaGGATTGCACACTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQYRIVK*DCTLRQ
Trigger: CTGCCTTAGTGTGCAATCTCATTTGACTATACGATA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATATCGTATAGTCAAATaGGATTGCACACTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQYRIVK*DCTLRQ
Trigger: CTGCCTTAGTGTGCAATCTCATTTGACTATACGATA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACAAACGAATCTTCACTaGTTACACACGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQQTNLH*LHTNVH
Trigger: GTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCAAACGAATCTTCACTaGTTACACACGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHQTNLH*LHTNVH
Trigger: GTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAATCCCTCTGAGCATTTaGAGATGTAGGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLIPLSI*RCRNSH
Trigger: ATGGGAATTCCTACATCTGCAAATGCTCAGAGGGAT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTATTCCAGTGACAAACTaGTTCACGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: YRCSTFLYMRCCISVVWIIPVTN*FTTSKF
Trigger: GAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAAT...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATTCCAGTGACAAACTaGTTCACGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHIPVTN*FTTSKF
Trigger: GAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGCAGGTTTTCTTATCTaGATTCAGGGTAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHAGFLI*IQGKAF
Trigger: AAAGGCTTTACCCTGAATCCAGATAAGAAAACCTGC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGCAGGTTTTCTTATCTaGATTCAGGGTAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLAGFLI*IQGKAF
Trigger: AAAGGCTTTACCCTGAATCCAGATAAGAAAACCTGC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGCAGGTTTTCTTATCTaGATTCAGGGTAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIAGFLI*IQGKAF
Trigger: AAAGGCTTTACCCTGAATCCAGATAAGAAAACCTGC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCCATGGTCTATAGCTTaGCAGACATCTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLPWSIA*QTSFLL
Trigger: CAGAAGGAAAGATGTCTGCCAAGCTATAGACCATGG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTAAAGACCAGGTCAATTaGGCCTTCAGTGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHIKDQVN*AFSAFL
Trigger: AAGAAATGCACTGAAGGCCCAATTGACCTGGTCTTT...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAAAGACCAGGTCAATTaGGCCTTCAGTGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLKDQVN*AFSAFL
Trigger: AAGAAATGCACTGAAGGCCCAATTGACCTGGTCTTT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAAAGACCAGGTCAATTaGGCCTTCAGTGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRKDQVN*AFSAFL
Trigger: AAGAAATGCACTGAAGGCCCAATTGACCTGGTCTTT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGCTTCTCCAAGACTCTTaGATCCATCGATCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLLLQDS*IHRSQR
Trigger: TCTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAG...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCTCCAAGACTCTTaGATCCATCGATCACAAAGA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLLLQDS*IHRSQR
Trigger: TCTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCTTCTCCAAGACTCTTaGATCCATCGATCACAAAGA +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYLLQDS*IHRSQR
Trigger: TCTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACAGGAAAGTAGGTCTTaGATATTTATGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSQESRS*IFMVTG
Trigger: GCCAGTCACCATAAATATCCAAGACCTACTTTCCTG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTGTCTTTGTTCTGTaGCAAACCAGGTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLLVFVL*QTRFLS
Trigger: ACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAAACAGCATTTCCTATaGCCAGTGTTCTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQKQHFL*PVFYRS
Trigger: ACTTCTGTAGAACACTGGCCATAGGAAATGCTGTTT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAAACAGCATTTCCTATaGCCAGTGTTCTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIKQHFL*PVFYRS
Trigger: ACTTCTGTAGAACACTGGCCATAGGAAATGCTGTTT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTGGTGTTGTATTTCTGTaGTATGGATTACACCAGAGT +
Preference number: 4 (lower is better)
Translates to: YRCSTFLYMRCCISVVWIGVVFL*YGLHQS
Trigger: ACTCTGGTGTAATCCATACCACAGAAATACAACACC...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
3UTR CAA 72 bp GTTGAATGGGAAAGCTTTTGTGTAGACCGTAAAAGATaGTCTTCTTCAAACAGATATCTGTGTTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: VEWESFCVDRKR*SSSNRYLCCTA
Trigger: TGCAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACGGTCTACACAAAAGCTTTCCCATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACATCCGTGATTAGATaGGGCACAGTAGTCTATCTT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTSVIR*GTVVYL
Trigger: AAGATAGACTACTGTGCCTCATCTAATCACGGATGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
CDS-3UTR TCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTTCATGTCTTTGGCTaGGTTGAAGTTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRFHVFG*VEVSQS
Trigger: ACTCTGAGAAACTTCAACTCAGCCAAAGACATGAAA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCTTGGATATTTATGGTaGCTGGCTCAGATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLLGYLW*LAQILL
Trigger: CAACAGAATCTGAGCCAGTCACCATAAATATCCAAG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACAGGTTTCTCAGTACTaGTTGTTTTACTTCACAACA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLQVSQY*LFYFTT
Trigger: TGTTGTGAAGTAAAACAATCAGTACTGAGAAACCTG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCAGGTTTCTCAGTACTaGTTGTTTTACTTCACAACA +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHQVSQY*LFYFTT
Trigger: TGTTGTGAAGTAAAACAATCAGTACTGAGAAACCTG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATATCGTATAGTCAAATaGGATTGCACACTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLYRIVK*DCTLRQ
Trigger: CTGCCTTAGTGTGCAATCTCATTTGACTATACGATA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTATCGTATAGTCAAATaGGATTGCACACTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYYRIVK*DCTLRQ
Trigger: CTGCCTTAGTGTGCAATCTCATTTGACTATACGATA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACAAACGAATCTTCACTaGTTACACACGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSQTNLH*LHTNVH
Trigger: GTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGATCCCTCTGAGCATTTaGAGATGTAGGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLIPLSI*RCRNSH
Trigger: ATGGGAATTCCTACATCTGCAAATGCTCAGAGGGAT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAATTCCAGTGACAAACTaGTTCACGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRIPVTN*FTTSKF
Trigger: GAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAAT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAATTCCAGTGACAAACTaGTTCACGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLIPVTN*FTTSKF
Trigger: GAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAAT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATTCCAGTGACAAACTaGTTCACGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSIPVTN*FTTSKF
Trigger: GAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGCAGGTTTTCTTATCTaGATTCAGGGTAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSAGFLI*IQGKAF
Trigger: AAAGGCTTTACCCTGAATCCAGATAAGAAAACCTGC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
CDS-3UTR CCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGAAACAGCATTTCCTATaGCCAGTGTTCTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLKQHFL*PVFYRS
Trigger: ACTTCTGTAGAACACTGGCCATAGGAAATGCTGTTT...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR TCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTTTCATGTCTTTGGCTaGGTTGAAGTTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLFHVFG*VEVSQS
Trigger: ACTCTGAGAAACTTCAACTCAGCCAAAGACATGAAA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR TCA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACAGGTTTCTCAGTACTaGTTGTTTTACTTCACAACA +
Preference number: 4 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSQVSQY*LFYFTT
Trigger: TGTTGTGAAGTAAAACAATCAGTACTGAGAAACCTG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAAACAGATATCTGTGTTaGACTGCAAAATTAGAACAG +
Preference number: 4 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQNRYLC*TAKLEQ
Trigger: CTGTTCTAATTTTGCAGTGCAACACAGATATCTGTT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATCTTACTTCTTCGTTTaGAAGGTTCTGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSYFFV*KVLEHY
Trigger: ATAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACAGAAGTAAGACTGTaGAAACTTTATCGTATAGTC +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTEVRL*KLYRIV
Trigger: GACTATACGATAAAGTTTGCACAGTCTTACTTCTGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACACAGAAGTAAGACTGTaGAAACTTTATCGTATAGTC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHTEVRL*KLYRIV
Trigger: GACTATACGATAAAGTTTGCACAGTCTTACTTCTGT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACAAAGAGTGCCATTTaGATTCTTACTACAAGAACC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTKSAI*ILTTRT
Trigger: GGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTTACTCTACAAAGAGTaGCATTTGCATTCTTACTAC +
Preference number: 4 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHLLYKE*HLHSYY
Trigger: GTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGAAGGTTTTGTTGAATaGGAAAGCTTTTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLEGFVE*ESFCVD
Trigger: GTCTACACAAAAGCTTTCCCATTCAACAAAACCTTC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATCGTTTGCAAGGTTCTaGAACATTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSFARF*NIIRFS
Trigger: TGAAAACCTTATAATGTTCCAGAACCTTGCAAACGA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATCGTTTGCAAGGTTCTaGAACATTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLSFARF*NIIRFS
Trigger: TGAAAACCTTATAATGTTCCAGAACCTTGCAAACGA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGAAACAGCATTTCCTATaGCCAGTGTTCTACAGAAGT +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLKQHFL*PVFYRS
Trigger: ACTTCTGTAGAACACTGGCCATAGGAAATGCTGTTT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTTGTATTTCTGTGGTATaGATTACACCAGAGTTTATC +
Preference number: 4 (lower is better)
Translates to: YRCSTFLYMRCCISVVWICISVV*ITPEFI
Trigger: GATAAACTCTGGTGTAATCCATACCACAGAAATACA...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTAACAGATATCTGTGTTaGACTGCAAAATTAGAACAG +
Preference number: 4 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHINRYLC*TAKLEQ
Trigger: CTGTTCTAATTTTGCAGTGCAACACAGATATCTGTT...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAACAGATATCTGTGTTaGACTGCAAAATTAGAACAG +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLNRYLC*TAKLEQ
Trigger: CTGTTCTAATTTTGCAGTGCAACACAGATATCTGTT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATCTTACTTCTTCGTTTaGAAGGTTCTGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSYFFV*KVLEHY
Trigger: ATAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTCTTACTTCTTCGTTTaGAAGGTTCTGGAACATTAT +
Preference number: 4 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYSYFFV*KVLEHY
Trigger: ATAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACAGAAGTAAGACTGTaGAAACTTTATCGTATAGTC +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTEVRL*KLYRIV
Trigger: GACTATACGATAAAGTTTGCACAGTCTTACTTCTGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATCGTTTGCAAGGTTCTaGAACATTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSFARF*NIIRFS
Trigger: TGAAAACCTTATAATGTTCCAGAACCTTGCAAACGA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CCA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATCGTTTGCAAGGTTCTaGAACATTATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLSFARF*NIIRFS
Trigger: TGAAAACCTTATAATGTTCCAGAACCTTGCAAACGA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR GCA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACAGAAGTAAGACTGTaGAAACTTTATCGTATAGTC +
Preference number: 4 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTEVRL*KLYRIV
Trigger: GACTATACGATAAAGTTTGCACAGTCTTACTTCTGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS CCA 90 bp CGCCGCTTGCTCCAAGTCCCATCCCAGAGCGCTCCCTTCGCTCGCTaGCTGCCTGGGAGGCGCTGGGCAAGGGCGGGCGGCTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RRLLQVPSQSAPFAR*LPGRRWARAGGWGG
Trigger: GCCTCCCCAGCCGCCCGCCCTTGCCCAGCGCCTCCCAGGCAGCCAGCGAGCGAAGGGAGCGCTCTGGGATGGGACTTGGAGCAAGCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS GCA 90 bp TCCTCGGGGATCGCTCGTGGGAGGCGAGGACGGAGCCCCAGCTTCTaGCTCTGCCTCTGTCTCCGCCGCCGCCGCTTGCTCCAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SSGIARGRRGRSPSF*LCLCLRRRRLLQVP
Trigger: TGGGACTTGGAGCAAGCGGCGGCGGCGGAGACAGAGGCAGAGGCAGAAGCTGGGGCTCCGTCCTCGCCTCCCACGAGCGATCCCCGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254898.7
ENST00000521689.5
CDS TCA 90 bp CGGGTGGGTCCGAGCGTGTCTGCCCCTAGAGATGGACCTCCCACGTaGCCGCTCCCTGGCCTCGGCAGGGAGGAGGACGATCTGTCCGAG +
Preference number: 5 (lower is better)
Translates to: RVGPSVSAPRDGPPT*PLPGLGREEDDLSE
Trigger: CTCGGACAGATCGTCCTCCTCCCTGCCGAGGCCAGGGAGCGGTCACGTGGGAGGTCCATCTCTAGGGGCAGACACGCTCGGACCCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 90 bp GACCCGTGGCACATTCTCCCTCAGGGGCCGGGCCCCCTCTGCTTCTaGGAATGCGATGTTCAGGGCATACTGGATGGCCAGCCCAGTCAT +
Preference number: 5 (lower is better)
Translates to: DPWHILPQGPGPLCF*ECDVQGILDGQPSH
Trigger: ATGACTGGGCTGGCCATCCAGTATGCCCTGAACATCGCATTCTCAGAAGCAGAGGGGGCCCGGCCCCTGAGGGAGAATGTGCCACGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 90 bp ACACCTGACAGACCATCAGGAAACCCGGTGGGCTCCAGAAATAACTaGTTGCTAGTGAACCCGCCCGCCCCCATGAGTGGACCCCACCTT +
Preference number: 5 (lower is better)
Translates to: TPDRPSGNPVGSRNN*LLVNPPAPMSGPHL
Trigger: AAGGTGGGGTCCACTCATGGGGGCGGGCGGGTTCACTAGCAACCAGTTATTTCTGGAGCCCACCGGGTTTCCTGATGGTCTGTCAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523490.1
CDS TCA 90 bp AAACACAACACAAGAAGAGGGCAGGGTGAGATTTCCGGGTCTCCCTaGACTCCAGGAGCTGCAGGCCCGCTGCCCCGCCTTTTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KHNTRRGQGEISGSP*TPGAAGPLPRLFRV
Trigger: AACTCTGAAAAGGCGGGGCAGCGGGCCTGCAGCTCCTGGAGTTCAGGGAGACCCGGAAATCTCACCCTGCCCTCTTCTTGTGTTGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520016.5
ENST00000520160.1
CDS CCA 90 bp CAGACGAAGGAATCCTCCGTGTTCAGACACAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGGTCCACTCGGCTGCAGGTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QTKESSVFRHSCSQP*SCCAQWSTRLQVLP
Trigger: TGGCAAAACCTGCAGCCGAGTGGACCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCTGTGTCTGAACACGGAGGATTCCTTCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000522270.5
ENST00000524308.5
CDS TCA 90 bp GAGTGTAGCCACGGTGGCAGCGGCAGTAGTAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGCCCGGTTTGTTCAGTGCACAGTAGT +
Preference number: 5 (lower is better)
Translates to: ECSHGGSGSSSSPPC*RTHAHSPVCSVHSS
Trigger: ACTACTGTGCACTGAACAAACCGGGCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCTACTACTGCCGCTGCCACCGTGGCTACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000522270.5
ENST00000523490.1
ENST00000524308.5
CDS GCA 90 bp GTGAGATTTCCGGGTCTCCCTGAACTCCAGGAGCTGCAGGCCCGCTaGCCCGCCTTTTCAGAGTTCAAACAGACCACTTGCACTCAAAAT +
Preference number: 5 (lower is better)
Translates to: VRFPGLPELQELQAR*PAFSEFKQTTCTQN
Trigger: ATTTTGAGTGCAAGTGGTCTGTTTGAACTCTGAAAAGGCGGGGCAGCGGGCCTGCAGCTCCTGGAGTTCAGGGAGACCCGGAAATCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520160.1
CDS CCA 90 bp TCATGGGGCTCACTCCCAATGGACTTCAAGGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAGATTAGGATGCCCGTGTCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: SWGSLPMDFKVLKST*PTPMAKIRMPVSRA
Trigger: GGCACGGGACACGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 90 bp TGTTTGCACCTGCAGACGTATGAGCCAGGGATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGGGTGCTGCACATATGGGCCGTGCAC +
Preference number: 5 (lower is better)
Translates to: CLHLQTYEPGMLMQK*AQLCSRVLHIWAVH
Trigger: GTGCACGGCCCATATGTGCAGCACCCTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAGGTGCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 90 bp GCACACGTCTTCCCATCGCTGCGGAGCACGTGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCCATGTTGACACAGGAGTATTCACAA +
Preference number: 5 (lower is better)
Translates to: AHVFPSLRSTCPSGH*QAKDLSMLTQEYSQ
Trigger: TTGTGAATACTCCTGTGTCAACATGGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 90 bp GAATGTAGCCTTGTTTGCACCTGCAGACGTATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGTTATGCTCCACCCGGGTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: ECSLVCTCRRMSQGC*CRSGHSYAPPGSSS
Trigger: CGAGGAAGACCCGGGTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCTACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522025.6
CDS CCA 90 bp GCCGTGCACAACTTCTTCTGGAACACGGAGGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGGAAGACATGGTCCTCATGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: AVHNFFWNTEVSVSI*LKLATRKTWSSWGS
Trigger: TGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 90 bp GTCATCAGCCTCGTGCTTCTACATGCCCAGGCCTTTTCCTTGAACTaGAATTCTCCATCTCCAGCTGCATCCAACCACGTGTGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: VISLVLLHAQAFSLN*NSPSPAASNHVCGL
Trigger: GAGCCCACACACGTGGTTGGATGCAGCTGGAGATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCATGTAGAAGCACGAGGCTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS TCA 90 bp AGACATGGTCCTCATGGGGCTCACTCCCAATGGACTTCAAGGTGTTaGAGTCTACCTGGCCCACACCAATGGCAAAGATTAGGATGCCCG +
Preference number: 5 (lower is better)
Translates to: RHGPHGAHSQWTSRC*SLPGPHQWQRLGCP
Trigger: CGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGGACCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 90 bp TGCACAACTTCTTCTGGAACACGGAGGTCAGCGTCTCAATCTGGCTaGAATTGGCCACAAGGAAGACATGGTCCTCATGGGGCTCACTCC +
Preference number: 5 (lower is better)
Translates to: CTTSSGTRRSASQSG*NWPQGRHGPHGAHS
Trigger: GGAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521041.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 90 bp GGGTCAACGACCACCACCAAACACATACTGCCCAGGCCTTTTCCTTaGACTGGAATTCTCCATCTCCAGCTGCATCCAACCACGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GSTTTTKHILPRPFP*TGILHLQLHPTTCV
Trigger: CACACACGTGGTTGGATGCAGCTGGAGATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCAGTATGTGTTTGGTGGTGGTCGTTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS GCA 90 bp GCCCACTCCCACAGGAAAGCTTGCTATGAGTTAGGGCTCCACAAATaGAGGCAAAACCCAAGCTTGCCTTTTCGAGACCATGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: AHSHRKACYELGLHK*RQNPSLPFRDHALS
Trigger: AGAGAGGGCATGGTCTCGAAAAGGCAAGCTTGGGTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGCTTTCCTGTGGGAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS CCA 90 bp AACGACCACCACCAAACACATACTGCCCAGGCCTTTTCCTTGAACTaGAATTCTCCATCTCCAGCTGCATCCAACCACGTGTGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: NDHHQTHTAQAFSLN*NSPSPAASNHVCGL
Trigger: GAGCCCACACACGTGGTTGGATGCAGCTGGAGATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCAGTATGTGTTTGGTGGTGGTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS TCA 90 bp GGTAAACGATGGGGTCTCTGCCCACTCCCACAGGAAAGCTTGCTATaGGTTAGGGCTCCACAAATGCAGGCAAAACCCAAGCTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: GKRWGLCPLPQESLL*VRAPQMQAKPKLAF
Trigger: AAAGGCAAGCTTGGGTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGCTTTCCTGTGGGAGTGGGCAGAGACCCCATCGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS TCA 90 bp CTGAGGCACAGTAGTCCACAGTTCTGCAAGTCGTCTGATCCGAGTTaGGAATGTAGCCTTGTTTGCACCTGCAGACGTATGAGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LRHSSPQFCKSSDPS*ECSLVCTCRRMSQG
Trigger: TCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCTACATTCTCAACTCGGATCAGACGACTTGCAGAACTGTGGACTACTGTGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS GCA 90 bp AACTGGGTAAACGATGGGGTCTCTGCCCACTCCCACAGGAAAGCTTaGTATGAGTTAGGGCTCCACAAATGCAGGCAAAACCCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: NWVNDGVSAHSHRKA*YELGLHKCRQNPSL
Trigger: CAAGCTTGGGTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGCTTTCCTGTGGGAGTGGGCAGAGACCCCATCGTTTACCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS GCA 90 bp TACTGCCCAGGCCTTTTCCTTGAACTGGAATTCTCCATCTCCAGCTaGATCCAACCACGTGTGTGGGCTCTCTCTTGGACGCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: YCPGLFLELEFSISS*IQPRVWALSWTHLF
Trigger: AAACAGATGCGTCCAAGAGAGAGCCCACACACGTGGTTGGATGCAGCTGGAGATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS CCA 90 bp GAGGTCAGCGTCTCAATCTGGCTGAAATTGGCCACAAGGAAGACATaGTCCTCATGGGGCTCACTCCCAATGGACTTCAAGGTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: EVSVSIWLKLATRKT*SSWGSLPMDFKVLK
Trigger: CTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 90 bp AGAGAGAAGGAGAAGTGGGTTATTAGGGCTGCCATTTCACTCAACTaGGTAAACGATGGGGTCTCTGCCCACTCCCACAGGAAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: REKEKWVIRAAISLN*VNDGVSAHSHRKAC
Trigger: GCAAGCTTTCCTGTGGGAGTGGGCAGAGACCCCATCGTTTACCCAGTTGAGTGAAATGGCAGCCCTAATAACCCACTTCTCCTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS CCA 90 bp TGGATGCACAACTTCTTCTGGAACACGGAGGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGGAAGACATGGTCCTCATGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: WMHNFFWNTEVSVSI*LKLATRKTWSSWGS
Trigger: TGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521041.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGACAGTGCTGCCATATaGGAGCAGGCCCACTCGGGT +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSDSAAI*EQAHSG
Trigger: ACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGTC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGACCCGGGAGCAGGTCTaGAGGTCCTCGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSTREQV*RSSLMR
Trigger: CCTCATCAACGAGGACCTCAAGACCTGCTCCCGGGT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGDFPGLPFSVSFLLSAVAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...CACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp TCCCCTGCTGGAGAGTCCTGTCTTCCATCGGAGTCTTCTAGAGCTTCACAGATGCGCAGCCATGGTGGGTaGATTTGCAGACATCTTACT +
Preference number: 5 (lower is better)
Translates to: SPAGESCLPSESSRASQMRSHGG*ICRHLT
Trigger: AGTAAGATGTCTGCAAATCAACCCACCATGGCTGCG...CATCTGTGAAGCTCTAGAAGACTCCGATGGAAGACAGGACTCTCCAGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS TCA 90 bp CTGATCCGAGTTGAGAATGTAGCCTTGTTTGCACCTGCAGACGTATaGGCCAGGGATGTTGATGCAGAAGTGGGCACAGTTATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LIRVENVALFAPADV*ARDVDAEVGTVMLQ
Trigger: CTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCTACATTCTCAACTCGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 90 bp GCACGTGTCCCTCAGGACACTGACAGGCAAAGGATCTGTCCATGTTaGCACAGGAGTATTCACAACCATGGTCACTCAGCAGGCAGTAAT +
Preference number: 5 (lower is better)
Translates to: ARVPQDTDRQRICPC*HRSIHNHGHSAGSN
Trigger: ATTACTGCCTGCTGAGTGACCATGGTTGTGAATACTCCTGTGTCAACATGGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACACGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 90 bp CTGATCCGAGTTGAGAATGTAGCCTTGTTTGCACCTGCAGACGTATaGGCCAGGGATGTTGATGCAGAAGTGGGCACAGTTATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LIRVENVALFAPADV*ARDVDAEVGTVMLH
Trigger: GTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAGGTGCAAACAAGGCTACATTCTCAACTCGGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522025.6
CDS CCA 90 bp GTCTCAATCTGGCTGAAATTGGCCACAAGGAAGACATGGTCCTCATaGGGCTCACTCCCAATGGACTTCAAGGTGTTGAAGTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: VSIWLKLATRKTWSS*GSLPMDFKVLKSTW
Trigger: CCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 90 bp TTGAAGTTTCTCAGAGTGAACTCTGTGTGGACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCGGCTTTGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LKFLRVNSVWTCVEY*SSPTRAALGEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGTCCACACAGAGTTCACTCTGAGAAACTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000518370.1
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS CCA 90 bp TTCTCCATCTCCAGCTGCATCCAACCACGTGTGTGGGCTCTCTCTTaGACGCATCTGTTTGCCCTGAAAACTAGATTTCCTCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: FSISSCIQPRVWALS*THLFALKTRFPLCS
Trigger: ACTGCAGAGAGGAAATCTAGTTTTCAGGGCAAACAGATGCGTCCAAGAGAGAGCCCACACACGTGGTTGGATGCAGCTGGAGATGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACTCCGCCGCCGCCGCTaGCTCCAAGTCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRLRRRR*LQVPSQ
Trigger: CTGGGATGGGACTTGGAGCAAGCGGCGGCGGCGGAG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACTCCGCCGCCGCCGCTaGCTCCAAGTCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSLRRRR*LQVPSQ
Trigger: CTGGGATGGGACTTGGAGCAAGCGGCGGCGGCGGAG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254898.7
ENST00000521689.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCAGAGCTGCTCACAGTaGTGGTCCTCCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSQSCSQ*WSSMAH
Trigger: GTGTGCCATGGAGGACCACAACTGTGAGCAGCTCTG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TCCCCTGCTGGAGAGTCCTGTCTTCCATCGGAGTCTTCTAGAGCTTCACAGATGTACATAGTGATACTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SPAGESCLPSESSRASQMYIVIL*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAGTATCACTATGTA...CATCTGTGAAGCTCTAGAAGACTCCGATGGAAGACAGGACTCTCCAGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGCAGCCATGGTGGGTaGATTTGCAGACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSRSHGG*ICRHPS
Trigger: GGAAGGATGTCTGCAAATCAACCCACCATGGCTGCG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS GCA 90 bp GATTCCATCTATTTTCAGGGTCAACGACCACCACCAAACACATACTaGCCAGGCCTTTTCCTTGAACTGGAATTCTCCATCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DSIYFQGQRPPPNTY*PGLFLELEFSISSC
Trigger: GCAGCTGGAGATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCAGTATGTGTTTGGTGGTGGTCGTTGACCCTGAAAATAGATGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS CCA 90 bp CACACAAACGAATCTTCACTGCTTACACACGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAGTCCAATTTTGCACACGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: HTNESSLLTHECSQP*SPRAQESNFAHVFP
Trigger: TGGGAAGACGTGTGCAAAATTGGACTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS CCA 90 bp CTTGAACTGGAATTCTCCATCTCCAGCTGCATCCAACCACGTGTGTaGGCTCTCTCTTGGACGCATCTGTTTGCCCTGAAAACTAGATTT +
Preference number: 5 (lower is better)
Translates to: LELEFSISSCIQPRV*ALSWTHLFALKTRF
Trigger: AAATCTAGTTTTCAGGGCAAACAGATGCGTCCAAGAGAGAGCCCACACACGTGGTTGGATGCAGCTGGAGATGGAGAATTCCAGTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS GCA 90 bp GGAGTATATAACCTTCAAAGCACTGGCACACAAACGAATCTTCACTaGTTACACACGAATGTTCACAACCGTGGTCCCCCAGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: GVYNLQSTGTQTNLH*LHTNVHNRGPPEHK
Trigger: CTTGTGCTCTGGGGGACCACGGTTGTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTGTGTGCCAGTGCTTTGAAGGTTATATACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAAGATGCCGCATCCTCTaGACAGCACGCTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLRCRIL*TARSTS
Trigger: CGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATCT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGATGCCGCATCCTCTaGACAGCACGCTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIRCRIL*TARSTS
Trigger: CGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGATGGACTTCAAGGTGTaGAAGTCTACCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSMDFKV*KSTWPT
Trigger: TGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCAT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCACCCGGGAGCAGGTCTaGAGGTCCTCGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLITREQV*RSSLMR
Trigger: CCTCATCAACGAGGACCTCAAGACCTGCTCCCGGGT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACCCGGGAGCAGGTCTaGAGGTCCTCGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTREQV*RSSLMR
Trigger: CCTCATCAACGAGGACCTCAAGACCTGCTCCCGGGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCTGGAGAGTCCTGTCTTCCATCGGAGTCTTCTAGAGCTTCACAGATGCCTTTCAAGGATCTGTCCATGTaGACACAGGAGTATTCACAA +
Preference number: 5 (lower is better)
Translates to: AGESCLPSESSRASQMPFKDLSM*TQEYSQ
Trigger: TTGTGAATACTCCTGTGTCAACATGGACAGATCCTT...GAAAGGCATCTGTGAAGCTCTAGAAGACTCCGATGGAAGACAGGACTCTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCACAAGAGTCCAATTTaGCACACGTCTTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSHKSPI*HTSSHR
Trigger: GCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTCACAAGAGTCCAATTTaGCACACGTCTTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: CLFVGSEAISCSSSSMAFHKSPI*HTSSHR
Trigger: GCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG...AAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp TCAGGCGATTTTCCAGGGCTTCCATTCTCTGTGTCATTTCTTCTAAGCGCTGTGAGAAGAGATGCTTGTTaGTGGGCTCAGAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: SGDFPGLPFSVSFLLSAVRRDAC*WAQRQS
Trigger: AGATTGCCTCTGAGCCCACAAACAAGCATCTCTTCT...CACAGCGCTTAGAAGAAATGACACAGAGAATGGAAGCCCTGGAAAATCGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp CTCCTCAATGGCTTTTCCTACCCCAACAGCATACATAGTGATACTCTTGCACCGAGATTCTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LLNGFSYPNSIHSDTLAPRFCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT...CGGTGCAAGAGTATCACTATGTATGCTGTTGGGGTAGGAAAAGCCATTGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCTGGCTCAGATTCTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSLAQIL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGAATCTGAGCCAG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp AAGAGATGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGCTGGCTCAGATTCTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: KRCLFVGSEAISCSSSSMLAQIL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGAATCTGAGCCAG...CATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp AAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTTCCACATCCTTACACCAGGTCTGCCCGCTaGTTCTCACAGGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: KECHLHSYYKNLTFPHPYTRSAR*FSQELS
Trigger: GGAGAGTTCCTGTGAGAACAAGCGGGCAGACCTGGT...GTAAGGATGTGGAAATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACCAGGTCTGCCCGCTaGTTCTCACAGGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTRSAR*FSQELS
Trigger: GGAGAGTTCCTGTGAGAACAAGCGGGCAGACCTGGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAGACAGTGCTGCCATATaGGAGCAGGCCCACTCGGGT +
Preference number: 5 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEDSAAI*EQAHSG
Trigger: ACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGTC...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGACAGTGCTGCCATATaGGAGCAGGCCCACTCGGGT +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLDSAAI*EQAHSG
Trigger: ACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGTC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGATGCCGCATCCTCTaGACAGCACGCTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLRCRIL*TARSTS
Trigger: CGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATCT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAGATGCCGCATCCTCTaGACAGCACGCTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRRCRIL*TARSTS
Trigger: CGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATCT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCAATCTGGCTGAAATaGGCCACAAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSIWLK*ATRKTW
Trigger: CCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGTTGAGAATGTAGCCTaGTTTGCACCTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSVENVA*FAPADV
Trigger: TACGTCTGCAGGTGCAAACAAGGCTACATTCTCAAC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCAGAGCTGCTCACAGTaGTGGTCCTCCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIQSCSQ*WSSMAH
Trigger: GTGTGCCATGGAGGACCACAACTGTGAGCAGCTCTG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAACTCGGCTGCAGGTTTaGCCATTGGGGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQTRLQV*PLGSRV
Trigger: CACTCTGGACCCCAATGGCAAAACCTGCAGCCGAGT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACTCGGCTGCAGGTTTaGCCATTGGGGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTRLQV*PLGSRV
Trigger: CACTCTGGACCCCAATGGCAAAACCTGCAGCCGAGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACTCGGCTGCAGGTTTaGCCATTGGGGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTRLQV*PLGSRV
Trigger: CACTCTGGACCCCAATGGCAAAACCTGCAGCCGAGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACCCGGGAGCAGGTCTaGAGGTCCTCGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTREQV*RSSLMR
Trigger: CCTCATCAACGAGGACCTCAAGACCTGCTCCCGGGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGGCCATGGTCTATAGCTaGGCAGACATCTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSAMVYS*ADIFPS
Trigger: AGAAGGAAAGATGTCTGCCAAGCTATAGACCATGGC...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAGAAGAGATGCTTGTTaGTGGGCTCAGAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSRRDAC*WAQRQS
Trigger: AGATTGCCTCTGAGCCCACAAACAAGCATCTCTTCT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 90 bp AAGACACAGCACTTAGACTGGGATCTAACTGGTGAGCCGGGGACATaGGTACAAGGAAAAATAGGCAGAACTGCTATCTGTAAGCATATC +
Preference number: 5 (lower is better)
Translates to: KTQHLDWDLTGEPGT*VQGKIGRTAICKHI
Trigger: GATATGCTTACAGATAGCAGTTCTGCCTATTTTTCCTTGTACTCATGTCCCCGGCTCACCAGTTAGATCCCAGTCTAAGTGCTGTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523561.1
CDS TCA 90 bp AGTCCTGTCTTCCATCGGAGTCTTCTAGAGCTGAGCAGAAAAAGATaGCCAAAAGAAGTGATGGTTGTCCACAGGCATGTGTGTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SPVFHRSLLELSRKR*PKEVMVVHRHVCVL
Trigger: AAGAACACACACATGCCTGTGGACAACCATCACTTCTTTTGGTCATCTTTTTCTGCTCAGCTCTAGAAGACTCCGATGGAAGACAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523561.1
CDS GCA 90 bp CTCTCTTGGACGCATCTGTTTGCCCTGAAAACTAGATTTCCTCTCTaGAGTTATCCATCAGTCTTAATTACTCTGAACCCACCAGCCATC +
Preference number: 5 (lower is better)
Translates to: LSWTHLFALKTRFPL*SYPSVLITLNPPAI
Trigger: GATGGCTGGTGGGTTCAGAGTAATTAAGACTGATGGATAACTGCAGAGAGGAAATCTAGTTTTCAGGGCAAACAGATGCGTCCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACCAGGTCTGCCCGCTaGTTCTCACAGGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTRSAR*FSQELS
Trigger: GGAGAGTTCCTGTGAGAACAAGCGGGCAGACCTGGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACAGAGCTGCTCACAGTaGTGGTCCTCCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSQSCSQ*WSSMAH
Trigger: GTGTGCCATGGAGGACCACAACTGTGAGCAGCTCTG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAACTCGGCTGCAGGTTTaGCCATTGGGGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: FTKPSNILMQVSLYVWAETRLQV*PLGSRV
Trigger: CACTCTGGACCCCAATGGCAAAACCTGCAGCCGAGT...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAACTCGGCTGCAGGTTTaGCCATTGGGGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLTRLQV*PLGSRV
Trigger: CACTCTGGACCCCAATGGCAAAACCTGCAGCCGAGT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACGCAGCCATGGTGGGTaGATTTGCAGACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLRSHGG*ICRHPS
Trigger: GGAAGGATGTCTGCAAATCAACCCACCATGGCTGCG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCGCAGCCATGGTGGGTaGATTTGCAGACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHRSHGG*ICRHPS
Trigger: GGAAGGATGTCTGCAAATCAACCCACCATGGCTGCG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTCTTCTCCAAGACTCTaGGATCCATCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSSSPRL*DPSITK
Trigger: CTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAGA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHPTRAA*GEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIPTRAA*GEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRAVGPF*AVPLLE
Trigger: CTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCCTGTACATGCGGTGTaGTATTTCTGTGGTATGGAT +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSPVHAV*YFCGMD
Trigger: ATCCATACCACAGAAATACAACACCGCATGTACAGG...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS GCA 90 bp AATGTCCAAGAATTGCAAGATGTCCACGATGAACTCCTTGACCTTTaGATAGTCATGGGTGTTGACACTGCGAGAGCTGTCAATGATGAA +
Preference number: 5 (lower is better)
Translates to: NVQELQDVHDELLDL*IVMGVDTARAVNDE
Trigger: TTCATCATTGACAGCTCTCGCAGTGTCAACACCCATGACTATGCAAAGGTCAAGGAGTTCATCGTGGACATCTTGCAATTCTTGGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGACCAATGTCCAAGAATaGCAAGATGTCCACGATGAA +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSTNVQE*QDVHDE
Trigger: TTCATCGTGGACATCTTGCAATTCTTGGACATTGGT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAACCTCGGACTTCCTCTaGAAGGTCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLTSDFL*KVLREN
Trigger: GTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAACCTCGGACTTCCTCTaGAAGGTCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQTSDFL*KVLREN
Trigger: GTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCAGAGCTGCTCACAGTaGTGGTCCTCCATGGCACAC +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLQSCSQ*WSSMAH
Trigger: GTGTGCCATGGAGGACCACAACTGTGAGCAGCTCTG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCGTCTTGAGGTCCTCGTaGATGAGGAAGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIVLRSS*MRKPSE
Trigger: CTCAGAAGGCTTCCTCATCAACGAGGACCTCAAGAC...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGTCTTGAGGTCCTCGTaGATGAGGAAGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLVLRSS*MRKPSE
Trigger: CTCAGAAGGCTTCCTCATCAACGAGGACCTCAAGAC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGAAGGATCTGTCCATGTaGACACAGGAGTATTCACAA +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSKDLSM*TQEYSQ
Trigger: TTGTGAATACTCCTGTGTCAACATGGACAGATCCTT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACCATGGTGGGTTGATTaGCAGACATCCTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQPWWVD*QTSFLR
Trigger: CCGAAGGAAGGATGTCTGCAAATCAACCCACCATGG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACCATGGTGGGTTGATTaGCAGACATCCTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLPWWVD*QTSFLR
Trigger: CCGAAGGAAGGATGTCTGCAAATCAACCCACCATGG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCCATGGTGGGTTGATTaGCAGACATCCTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIPWWVD*QTSFLR
Trigger: CCGAAGGAAGGATGTCTGCAAATCAACCCACCATGG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAACGCAGCCATGGTGGGTaGATTTGCAGACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: FTKPSNILMQVSLYVWAERSHGG*ICRHPS
Trigger: GGAAGGATGTCTGCAAATCAACCCACCATGGCTGCG...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACGCAGCCATGGTGGGTaGATTTGCAGACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLRSHGG*ICRHPS
Trigger: GGAAGGATGTCTGCAAATCAACCCACCATGGCTGCG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACGCAGCCATGGTGGGTaGATTTGCAGACATCCTTCC +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRRSHGG*ICRHPS
Trigger: GGAAGGATGTCTGCAAATCAACCCACCATGGCTGCG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACCTTCAGTGCATTTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQPSVHF*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAAATGCACTGAAGG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACCTTCAGTGCATTTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQPSVHF*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAAATGCACTGAAGG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPTRAA*GEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYPTRAA*GEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLPTRAA*GEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGATGTCTTTGGCTGAGTaGAAGTTTCTCAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSMSLAE*KFLRVN
Trigger: GTTCACTCTGAGAAACTTCAACTCAGCCAAAGACAT...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 90 bp AATAGCCTGAGCTTTGGGGCTCTGCACTGCGTTCATTGTAATCCGTaGTACAATGACTACAAATGTGTCGCGATTTCTAATCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: NSLSFGALHCVHCNP*YNDYKCVAISNLHL
Trigger: CAGATGAAGATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCCCAAAGCTCAGGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000523561.1
ENST00000524308.5
CDS TCA 90 bp TATTTTGACAACTGCAGTTTGGATTTGAAGTCTTCCAATGGTAAATaGGTCATCAGCCTCGTGCTTCTACATGCCCAGGCCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: YFDNCSLDLKSSNGK*VISLVLLHAQAFSL
Trigger: CAAGGAAAAGGCCTGGGCATGTAGAAGCACGAGGCTGATGACTCATTTACCATTGGAAGACTTCAAATCCAAACTGCAGTTGTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAACCTCGGACTTCCTCTaGAAGGTCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRTSDFL*KVLREN
Trigger: GTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAACCTCGGACTTCCTCTaGAAGGTCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSTSDFL*KVLREN
Trigger: GTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATGGACTTCAAGGTGTaGAAGTCTACCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLMDFKV*KSTWPT
Trigger: TGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCAT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGGACTTCAAGGTGTaGAAGTCTACCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQMDFKV*KSTWPT
Trigger: TGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCAT...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGTCTTGAGGTCCTCGTaGATGAGGAAGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRVLRSS*MRKPSE
Trigger: CTCAGAAGGCTTCCTCATCAACGAGGACCTCAAGAC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGTCTTGAGGTCCTCGTaGATGAGGAAGCCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLVLRSS*MRKPSE
Trigger: CTCAGAAGGCTTCCTCATCAACGAGGACCTCAAGAC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACACAAGAGTCCAATTTaGCACACGTCTTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQHKSPI*HTSSHR
Trigger: GCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCCACAAGAGTCCAATTTaGCACACGTCTTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIHKSPI*HTSSHR
Trigger: GCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAACACAAGAGTCCAATTTaGCACACGTCTTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQHKSPI*HTSSHR
Trigger: GCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAACCATGGTGGGTTGATTaGCAGACATCCTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEPWWVD*QTSFLR
Trigger: CCGAAGGAAGGATGTCTGCAAATCAACCCACCATGG...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACCATGGTGGGTTGATTaGCAGACATCCTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLPWWVD*QTSFLR
Trigger: CCGAAGGAAGGATGTCTGCAAATCAACCCACCATGG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCACCATGGTGGGTTGATTaGCAGACATCCTTCCTTCGG +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSPWWVD*QTSFLR
Trigger: CCGAAGGAAGGATGTCTGCAAATCAACCCACCATGG...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGCCTTCAGTGCATTTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLPSVHF*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAAATGCACTGAAGG...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACCTTCAGTGCATTTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRPSVHF*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAAATGCACTGAAGG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACCTTCAGTGCATTTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLPSVHF*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAAATGCACTGAAGG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLPTRAA*GEIVKE
Trigger: TTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACTGGCTCAGATTCTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQLAQIL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGAATCTGAGCCAG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp AAGAGATGCTTGTTTGTGGGCTCAGAGGCAATCTCTTGTAGTTCCTCCTCAATGTTCCTGAAGGTTTTGTaGAATGGGAAAGCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: KRCLFVGSEAISCSSSSMFLKVL*NGKAFV
Trigger: CACAAAAGCTTTCCCATTCAACAAAACCTTCAGGAA...CATTGAGGAGGAACTACAAGAGATTGCCTCTGAGCCCACAAACAAGCATCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp GAGGCAATCTCTTGTAGTTCCTCCTCAATGGCTTTTCCTACCCCAACAGCATACTTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 5 (lower is better)
Translates to: EAISCSSSSMAFPTPTAYFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...GTATGCTGTTGGGGTAGGAAAAGCCATTGAGGAGGAACTACAAGAGATTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTTGCACTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLILHCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGTGCAA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATTGCACTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQLHCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGTGCAA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS TCA 90 bp TTGCATGAAACAATCAAGAGGCAAAACATTCTCTACTCAGAAATCTaGAAGGCCTTCCCTCCCTGTTACCCCTCATCTCAAGAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LHETIKRQNILYSEI*KAFPPCYPSSQEFF
Trigger: AAAGAACTCTTGAGATGAGGGGTAACAGGGAGGGAAGGCCTTTCAGATTTCTGAGTAGAGAATGTTTTGCCTCTTGATTGTTTCATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523561.1
CDS GCA 90 bp GCTTTGGGGGAAATTGTCAAGGAATCTATAATTCCAGTGACAAACTaGTTCACGACCTCAAAATTCTCTTCTCCAAGACTCTTGGATCCA +
Preference number: 5 (lower is better)
Translates to: ALGEIVKESIIPVTN*FTTSKFSSPRLLDP
Trigger: TGGATCCAAGAGTCTTGGAGAAGAGAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAATTATAGATTCCTTGACAATTTCCCCCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000518370.1
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAGGGAGAACTCATTCTaGACAGTGCTGCCATATTGG +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHRENSF*TVLPYW
Trigger: CCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCAGGGAGAACTCATTCTaGACAGTGCTGCCATATTGG +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIRENSF*TVLPYW
Trigger: CCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCT...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp AGACTTACTCTACAAAGAGTGCCATTTGCATTCTTACTACAAGAACCTCACATTATGGACTTCAAGGTGTaGAAGTCTACCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: RLTLQRVPFAFLLQEPHIMDFKV*KSTWPT
Trigger: TGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCAT...AATGTGAGGTTCTTGTAGTAAGAATGCAAATGGCACTCTTTGTAGAGTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATCAATCTGGCTGAAATaGGCCACAAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQSIWLK*ATRKTW
Trigger: CCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTCAATCTGGCTGAAATaGGCCACAAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHSIWLK*ATRKTW
Trigger: CCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATCAATCTGGCTGAAATaGGCCACAAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSIWLK*ATRKTW
Trigger: CCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTTGAGAATGTAGCCTaGTTTGCACCTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVENVA*FAPADV
Trigger: TACGTCTGCAGGTGCAAACAAGGCTACATTCTCAAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAGTTGAGAATGTAGCCTaGTTTGCACCTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQVENVA*FAPADV
Trigger: TACGTCTGCAGGTGCAAACAAGGCTACATTCTCAAC...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATCACAAGAGTCCAATTTaGCACACGTCTTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYHKSPI*HTSSHR
Trigger: GCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGCCATGGTCTATAGCTaGGCAGACATCTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHAMVYS*ADIFPS
Trigger: AGAAGGAAAGATGTCTGCCAAGCTATAGACCATGGC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGCCATGGTCTATAGCTaGGCAGACATCTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLAMVYS*ADIFPS
Trigger: AGAAGGAAAGATGTCTGCCAAGCTATAGACCATGGC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGCCTTCAGTGCATTTCTaGCACCGTCTTCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLPSVHF*HRLPSS
Trigger: TGAGGACGGAAGACGGTGCAAGAAATGCACTGAAGG...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAACAAAGACCAGGTCAATaGGGCCTTCAGTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQQRPGQ*GLQCIS
Trigger: AGAAATGCACTGAAGGCCCAATTGACCTGGTCTTTG...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTACAAAGACCAGGTCAATaGGGCCTTCAGTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLQRPGQ*GLQCIS
Trigger: AGAAATGCACTGAAGGCCCAATTGACCTGGTCTTTG...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCAAAGACCAGGTCAATaGGGCCTTCAGTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHQRPGQ*GLQCIS
Trigger: AGAAATGCACTGAAGGCCCAATTGACCTGGTCTTTG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTACATAGTGATACCATaGGCCTTGGCTTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHYIVIP*ALALLA
Trigger: GGCCAGTAAAGCCAAGGCCAATGGTATCACTATGTA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATACATAGTGATACCATaGGCCTTGGCTTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLYIVIP*ALALLA
Trigger: GGCCAGTAAAGCCAAGGCCAATGGTATCACTATGTA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCTTTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTAGAAGAGATGCTTGTTaGTGGGCTCAGAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: AFTKPSNILMQVSLYVWARRDAC*WAQRQS
Trigger: AGATTGCCTCTGAGCCCACAAACAAGCATCTCTTCT...AGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAAGATTCTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQRFCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGACTGGCTCAGATTCTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRLAQIL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGAATCTGAGCCAG...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTGGCTCAGATTCTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLLAQIL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGAATCTGAGCCAG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GGGCTCTGCACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGTTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 5 (lower is better)
Translates to: GLCTAFIVIRDTMTTNVSFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...CGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGTGCAGAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTGTGTTGCACTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLICVAL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGTGCAACACAGAT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACATCTGTGTTGCACTGTaGGCTGTTGGACCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHICVAL*AVGPFL
Trigger: CAAAAACGGTCCAACAGCCAACAGTGCAACACAGAT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAGGGAGAACTCATTCTaGACAGTGCTGCCATATTGG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRRENSF*TVLPYW
Trigger: CCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp TATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGTGGTATGGATTTTCCTCTTGAAGGTCTaGAGGGAGAACTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: YRCSTFLYMRCCISVVWIFLLKV*RENSFL
Trigger: CAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAA...AATCCATACCACAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATTCCTCTTGAAGGTCTaGAGGGAGAACTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLFLLKV*RENSFL
Trigger: CAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATCAATCTGGCTGAAATaGGCCACAAGGAAGACATGG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRSIWLK*ATRKTW
Trigger: CCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAGTTGAGAATGTAGCCTaGTTTGCACCTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLVENVA*FAPADV
Trigger: TACGTCTGCAGGTGCAAACAAGGCTACATTCTCAAC...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTTGAGAATGTAGCCTaGTTTGCACCTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSVENVA*FAPADV
Trigger: TACGTCTGCAGGTGCAAACAAGGCTACATTCTCAAC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGTTGAGAATGTAGCCTaGTTTGCACCTGCAGACGTA +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRVENVA*FAPADV
Trigger: TACGTCTGCAGGTGCAAACAAGGCTACATTCTCAAC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGCCATGGTCTATAGCTaGGCAGACATCTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSAMVYS*ADIFPS
Trigger: AGAAGGAAAGATGTCTGCCAAGCTATAGACCATGGC...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACAAAGACCAGGTCAATaGGGCCTTCAGTGCATTTCT +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLQRPGQ*GLQCIS
Trigger: AGAAATGCACTGAAGGCCCAATTGACCTGGTCTTTG...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATCTTCTCCAAGACTCTaGGATCCATCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQSSPRL*DPSITK
Trigger: CTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAGA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATCTTCTCCAAGACTCTaGGATCCATCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLSSPRL*DPSITK
Trigger: CTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAGA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATACATAGTGATACCATaGGCCTTGGCTTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLYIVIP*ALALLA
Trigger: GGCCAGTAAAGCCAAGGCCAATGGTATCACTATGTA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATAGAAGAGATGCTTGTTaGTGGGCTCAGAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYRRDAC*WAQRQS
Trigger: AGATTGCCTCTGAGCCCACAAACAAGCATCTCTTCT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAAGAAGAGATGCTTGTTaGTGGGCTCAGAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRRRDAC*WAQRQS
Trigger: AGATTGCCTCTGAGCCCACAAACAAGCATCTCTTCT...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAAGAAGAGATGCTTGTTaGTGGGCTCAGAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLRRDAC*WAQRQS
Trigger: AGATTGCCTCTGAGCCCACAAACAAGCATCTCTTCT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAAGATTCTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSRFCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAAAACAGATATCTGTGTaGCACTGTTGGCTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLKQISV*HCWLLD
Trigger: GTCCAACAGCCAACAGTGCAACACAGATATCTGTTT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518154.5
ENST00000521689.5
CDS-3UTR CAA 90 bp GACCGTAAAAGATTGTCTTCTTCAAACAGATATCTGTGTTGCACTGCAAAATTACCATGGTGGGTTGATTaGCAGACATCTTACTTCGGC +
Preference number: 5 (lower is better)
Translates to: DRKRLSSSNRYLCCTAKLPWWVD*QTSYFG
Trigger: GCCGAAGTAAGATGTCTGCAAATCAACCCACCATGG...TAATTTTGCAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTCCTCTTGAAGGTCTaGAGGGAGAACTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRFLLKV*RENSFL
Trigger: CAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAA...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTTCCTCTTGAAGGTCTaGAGGGAGAACTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYFLLKV*RENSFL
Trigger: CAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAAAGGATCTGTCCATGTaGACACAGGAGTATTCACAA +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLKDLSM*TQEYSQ
Trigger: TTGTGAATACTCCTGTGTCAACATGGACAGATCCTT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGGATCTGTCCATGTaGACACAGGAGTATTCACAA +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHKDLSM*TQEYSQ
Trigger: TTGTGAATACTCCTGTGTCAACATGGACAGATCCTT...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GACCGTAAAAGATTGTCTTCTTCAAACAGATATCTGTGTTGCACTGCAAAATTAGCCATGGTCTATAGCTaGGCAGACATCTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: DRKRLSSSNRYLCCTAKLAMVYS*ADIFPS
Trigger: AGAAGGAAAGATGTCTGCCAAGCTATAGACCATGGC...TAATTTTGCAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521952.5
CDS-3UTR CAA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAATCTTCTCCAAGACTCTaGGATCCATCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: FTKPSNILMQVSLYVWAESSPRL*DPSITK
Trigger: CTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAGA...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATTCTTCTCCAAGACTCTaGGATCCATCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYSSPRL*DPSITK
Trigger: CTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAGA...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATGTCTTTGGCTGAGTaGAAGTTTCTCAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLMSLAE*KFLRVN
Trigger: GTTCACTCTGAGAAACTTCAACTCAGCCAAAGACAT...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTACATAGTGATACCATaGGCCTTGGCTTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLYIVIP*ALALLA
Trigger: GGCCAGTAAAGCCAAGGCCAATGGTATCACTATGTA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGAGATTCTGTTGGCTGTaGGACCGTTTTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLRFCWL*DRFWQF
Trigger: GAACTGCCAAAAACGGTCCAACAGCCAACAGAATCT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACCTTATGCAGGTCTCTTaGTATGTATGGGCTGAAATC +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHLMQVS*YVWAEI
Trigger: GATTTCAGCCCATACATACAAAGAGACCTGCATAAG...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATAAACAGATATCTGTGTaGCACTGTTGGCTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYKQISV*HCWLLD
Trigger: GTCCAACAGCCAACAGTGCAACACAGATATCTGTTT...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS TCA 90 bp ATGTCTGAAAGCACTAATCTTATTTTGACAACTGCAGTTTGGATTTaGAGTCTTCCAATGGTAAATGAGTCATCAGCCTCGTGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: MSESTNLILTTAVWI*SLPMVNESSASCFY
Trigger: GTAGAAGCACGAGGCTGATGACTCATTTACCATTGGAAGACTTCAAATCCAAACTGCAGTTGTCAAAATAAGATTAGTGCTTTCAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAACCAATGTCCAAGAATaGCAAGATGTCCACGATGAA +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSTNVQE*QDVHDE
Trigger: TTCATCGTGGACATCTTGCAATTCTTGGACATTGGT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAAAGGATCTGTCCATGTaGACACAGGAGTATTCACAA +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSKDLSM*TQEYSQ
Trigger: TTGTGAATACTCCTGTGTCAACATGGACAGATCCTT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTCTTCTCCAAGACTCTaGGATCCATCGATCACAAAG +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLSSPRL*DPSITK
Trigger: CTTTGTGATCGATGGATCCAAGAGTCTTGGAGAAGA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTAATGTCTTTGGCTGAGTaGAAGTTTCTCAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLMSLAE*KFLRVN
Trigger: GTTCACTCTGAGAAACTTCAACTCAGCCAAAGACAT...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAATGTCTTTGGCTGAGTaGAAGTTTCTCAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSMSLAE*KFLRVN
Trigger: GTTCACTCTGAGAAACTTCAACTCAGCCAAAGACAT...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CTATGGCCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAATTCCTGAAGGTTTTGTaGAATGGGAAAGCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: LWPVFYRSKTVQTLSYSQFLKVL*NGKAFV
Trigger: CACAAAAGCTTTCCCATTCAACAAAACCTTCAGGAA...TTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGGCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATTCCTGAAGGTTTTGTaGAATGGGAAAGCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQFLKVL*NGKAFV
Trigger: CACAAAAGCTTTCCCATTCAACAAAACCTTCAGGAA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACTTCCTGAAGGTTTTGTaGAATGGGAAAGCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHFLKVL*NGKAFV
Trigger: CACAAAAGCTTTCCCATTCAACAAAACCTTCAGGAA...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTTACAAAGCCTAGTAACATTCTTATGCAGGTCTCTTTGTATGTATGGGCTGAAGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: FTKPSNILMQVSLYVWAEVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...TTCAGCCCATACATACAAAGAGACCTGCATAAGAATGTTACTAGGCTTTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGTATACTTCTTGTCTTaGTTCTGTGGCAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYVYFLS*FCGKPG
Trigger: ACCTGGTTTGCCACAGAACAAAGACAAGAAGTATAC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGACCAATGTCCAAGAATaGCAAGATGTCCACGATGAA +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLTNVQE*QDVHDE
Trigger: TTCATCGTGGACATCTTGCAATTCTTGGACATTGGT...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000524308.5
CDS-3UTR CAA 90 bp TACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTATTCCTGAAGGTTTTGTaGAATGGGAAAGCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: YFLSLFCGKPGFSVLIVLFLKVL*NGKAFV
Trigger: CACAAAAGCTTTCCCATTCAACAAAACCTTCAGGAA...TAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAATTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ACTGCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTATTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 5 (lower is better)
Translates to: TAFIVIRDTMTTNVSRFLFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...TAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp TTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACGTTAGTGTATACTTCTaGTCTTTGTTCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LSLFCGKPGFSVLIVLLHVSVYF*SLFCGK
Trigger: TTTGCCACAGAACAAAGACAAGAAGTATACACTAAC...GTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GTCTTTGTTCTGTGGCAAACCAGGTTTCTCAGTACTGATTGTTTTACTTCACAAGTTAGTGTATACTTCTaGTCTTTGTTCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VFVLWQTRFLSTDCFTSQVSVYF*SLFCGK
Trigger: TTTGCCACAGAACAAAGACAAGAAGTATACACTAAC...TTGTGAAGTAAAACAATCAGTACTGAGAAACCTGGTTTGCCACAGAACAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp GCGTTCATTGTAATCCGTGATACAATGACTACAAATGTGTCGCGATTTCTAATCTTTTTCATAGGCATGTaGGCCATTTCTCATACATAC +
Preference number: 5 (lower is better)
Translates to: AFIVIRDTMTTNVSRFLIFFIGM*AISHTY
Trigger: GTATGTATGAGAAATGGCCAACATGCCTATGAAAAA...GATTAGAAATCGCGACACATTTGTAGTCATTGTATCACGGATTACAATGAACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTTCCTGAAGGTTTTGTaGAATGGGAAAGCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLFLKVL*NGKAFV
Trigger: CACAAAAGCTTTCCCATTCAACAAAACCTTCAGGAA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp ATACAAGTTAGTGTATACTTCTTGTCTTTGTTCTGTGGCAAACCAGGTTTCTCATTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 5 (lower is better)
Translates to: IQVSVYFLSLFCGKPGFSFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...TGAGAAACCTGGTTTGCCACAGAACAAAGACAAGAAGTATACACTAACTTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGGTTAGTGTATACTTCTaGTCTTTGTTCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLVSVYF*SLFCGK
Trigger: TTTGCCACAGAACAAAGACAAGAAGTATACACTAAC...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp CCAGTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGAGTTAGTGTATACTTCTaGTCTTTGTTCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: PVFYRSKTVQTLSYSQMRVSVYF*SLFCGK
Trigger: TTTGCCACAGAACAAAGACAAGAAGTATACACTAAC...TCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACACTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp AGGCAGAAGCAAGTTGTGTCCACAGTATATTACAAAATACCTTGCATAGCTTATGTTAGTGTATACTTCTaGTCTTTGTTCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: RQKQVVSTVYYKIPCIAYVSVYF*SLFCGK
Trigger: TTTGCCACAGAACAAAGACAAGAAGTATACACTAAC...ATAAGCTATGCAAGGTATTTTGTAATATACTGTGGACACAACTTGCTTCTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS-3UTR CAA 90 bp CCATTTATTTGTATAGATGTAGCACATTCCTGTACATGCGGTGTTGTATTTCTGGCTAGATTTACAGGGTaGTGTGCATTTTCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: PFICIDVAHSCTCGVVFLARFTG*CAFSVL
Trigger: TAAAACTGAAAATGCACACAACCCTGTAAATCTAGC...CAGAAATACAACACCGCATGTACAGGAATGTGCTACATCTATACAAATAAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254898.7
CDS-3UTR CAA 90 bp GTGTTCTACAGAAGTAAGACTGTGCAAACTTTATCGTATAGTCAAATGAGATTGTTCTTACTTCTTCGTTaGCAAGGTTCTGGAACATTA +
Preference number: 5 (lower is better)
Translates to: VFYRSKTVQTLSYSQMRLFLLLR*QGSGTL
Trigger: TAATGTTCCAGAACCTTGCAAACGAAGAAGTAAGAA...CAATCTCATTTGACTATACGATAAAGTTTGCACAGTCTTACTTCTGTAGAACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000522025.6
ENST00000524308.5
CDS CCA 72 bp CCCCACCCTGTGGGCAGCCCCGGGAGCTGGGCACTCTaGCGGCGCGCCCTGCCTGCTGCCACCTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: PHPVGSPGSWAL*RRALPAATWLH
Trigger: GTGGAGCCAGGTGGCAGCAGGCAGGGCGCGCCGCCAGAGTGCCCAGCTCCCGGGGCTGCCCACAGGGTGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS CCA 72 bp CGGGCCGGGCGGAAGGAGGGGTGTCCTCTTTGGGGATaGGGAAGGCGCGGAGAGGGAGCGGCGGCGAGGGCG +
Preference number: 6 (lower is better)
Translates to: RAGRKEGCPLWG*GRRGEGAAARA
Trigger: CGCCCTCGCCGCCGCTCCCTCTCCGCGCCTTCCCCATCCCCAAAGAGGACACCCCTCCTTCCGCCCGGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521689.5
CDS TCA 72 bp ACAAGAAGAGGGCAGGGTGAGATTTCCGGGTCTCCCTaGACTCCAGGAGCTGCAGGCCCGCTGCCCCGCCTT +
Preference number: 6 (lower is better)
Translates to: TRRGQGEISGSP*TPGAAGPLPRL
Trigger: AAGGCGGGGCAGCGGGCCTGCAGCTCCTGGAGTTCAGGGAGACCCGGAAATCTCACCCTGCCCTCTTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520016.5
ENST00000520160.1
CDS TCA 72 bp CGGAGTCCTGAGGTCTCCCATCTGTCACGATCATTATaGCCCGTGGCACATTCTCCCTCAGGGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: RSPEVSHLSRSL*PVAHSPSGAGP
Trigger: GGGCCCGGCCCCTGAGGGAGAATGTGCCACGGGTCATAATGATCGTGACAGATGGGAGACCTCAGGACTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS GCA 72 bp CCGGGTCTCCCTGAACTCCAGGAGCTGCAGGCCCGCTaGCCCGCCTTTTCAGAGTTCAAACAGACCACTTGC +
Preference number: 6 (lower is better)
Translates to: PGLPELQELQAR*PAFSEFKQTTC
Trigger: GCAAGTGGTCTGTTTGAACTCTGAAAAGGCGGGGCAGCGGGCCTGCAGCTCCTGGAGTTCAGGGAGACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520160.1
CDS CCA 72 bp TTCTCACAGGAACTCTCCAGAAGGGCCGTCTGCGGGTaGGTCCGAGCGTGTCTGCCCCTAGAGATGGACCTC +
Preference number: 6 (lower is better)
Translates to: FSQELSRRAVCG*VRACLPLEMDL
Trigger: GAGGTCCATCTCTAGGGGCAGACACGCTCGGACCCACCCGCAGACGGCCCTTCTGGAGAGTTCCTGTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp GTGCACAGTGGTCCACTCGGCTGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCACGGTGGCAGCGGCAGT +
Preference number: 6 (lower is better)
Translates to: VHSGPLGCRFCH*GPECSHGGSGS
Trigger: ACTGCCGCTGCCACCGTGGCTACACTCTGGACCCCAATGGCAAAACCTGCAGCCGAGTGGACCACTGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000522270.5
ENST00000524308.5
CDS CCA 72 bp CCCCTAGGGTACACTCACGGCTGCAGGTTTTGCCATTaGGGTCCAGAGTGTAGCCACGGTGGCAGCGGCAGT +
Preference number: 6 (lower is better)
Translates to: PLGYTHGCRFCH*GPECSHGGSGS
Trigger: ACTGCCGCTGCCACCGTGGCTACACTCTGGACCCCAATGGCAAAACCTGCAGCCGTGAGTGTACCCTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523490.1
CDS TCA 72 bp CCCACTCGGAGACGTCATCCTGAGCCCGTCCGTCGGTaGACACAATGGCTGCTCTGGGCACCCTTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: PTRRRHPEPVRR*TQWLLWAPLWK
Trigger: TTTCCACAAGGGTGCCCAGAGCAGCCATTGTGTTCACCGACGGACGGGCTCAGGATGACGTCTCCGAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000519582.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 72 bp GCCTTGGCTTTACTGGCCCACTCGGAGACGTCATCCTaGGCCCGTCCGTCGGTGAACACAATGGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: ALALLAHSETSS*ARPSVNTMAAL
Trigger: CAGAGCAGCCATTGTGTTCACCGACGGACGGGCTCAGGATGACGTCTCCGAGTGGGCCAGTAAAGCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000519582.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS CAA 72 bp CCATCAGGAAACCCGGTGGGCTCCAGAAATAACTGGTaGCTAGTGAACCCGCCCGCCCCCATGAGTGGACCC +
Preference number: 6 (lower is better)
Translates to: PSGNPVGSRNNW*LVNPPAPMSGP
Trigger: GGGTCCACTCATGGGGGCGGGCGGGTTCACTAGCAACCAGTTATTTCTGGAGCCCACCGGGTTTCCTGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523490.1
CDS CAA 90 bp CCTGACAGACCATCAGGAAACCCGGTGGGCTCCAGAAATAACTGGTaGCTAGTGAACCCGCCCGCCCCCATGAGTGGACCCCACCTTCCA +
Preference number: 6 (lower is better)
Translates to: PDRPSGNPVGSRNNW*LVNPPAPMSGPHLP
Trigger: TGGAAGGTGGGGTCCACTCATGGGGGCGGGCGGGTTCACTAGCAACCAGTTATTTCTGGAGCCCACCGGGTTTCCTGATGGTCTGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523490.1
CDS CCA 72 bp GAATCCTCCGTGTTCAGACACAGCTGCTCACAGCCATaGTCCTGCTGTGCACAGTGGTCCACTCGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: ESSVFRHSCSQP*SCCAQWSTRLQ
Trigger: CTGCAGCCGAGTGGACCACTGTGCACAGCAGGACCATGGCTGTGAGCAGCTGTGTCTGAACACGGAGGATTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000522270.5
ENST00000524308.5
CDS CAA 72 bp CCAGTCATGGTGCCCGTGGACAGATGCCGCATCCTCTaGACAGCACGCTCCACCTCGGACTTCCTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: PVMVPVDRCRIL*TARSTSDFLLK
Trigger: CTTCAAGAGGAAGTCCGAGGTGGAGCGTGCTGTCAAGAGGATGCGGCATCTGTCCACGGGCACCATGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 72 bp CACGGTGGCAGCGGCAGTAGTAGCTCTCCTCCATGTTaGCGCACTCATGCTCACAGCCCGGTTTGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: HGGSGSSSSPPC*RTHAHSPVCSV
Trigger: CACTGAACAAACCGGGCTGTGAGCATGAGTGCGTCAACATGGAGGAGAGCTACTACTGCCGCTGCCACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000522270.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp AGACCATCAGGAAACCCGGTGGGCTCCAGAAATAACTaGTTGCTAGTGAACCCGCCCGCCCCCATGAGTGGA +
Preference number: 6 (lower is better)
Translates to: RPSGNPVGSRNN*LLVNPPAPMSG
Trigger: TCCACTCATGGGGGCGGGCGGGTTCACTAGCAACCAGTTATTTCTGGAGCCCACCGGGTTTCCTGATGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523490.1
CDS TCA 72 bp TTCCCATCGCTGCGGAGCACGTGTCCCTCAGGACACTaGCAGGCAAAGGATCTGTCCATGTTGACACAGGAG +
Preference number: 6 (lower is better)
Translates to: FPSLRSTCPSGH*QAKDLSMLTQE
Trigger: CTCCTGTGTCAACATGGACAGATCCTTTGCCTGTCAGTGTCCTGAGGGACACGTGCTCCGCAGCGATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS CCA 72 bp CTGCAGACGTATGAGCCAGGGATGTTGATGCAGAAGTaGGCACAGTTATGCTCCACCCGGGTCTTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: LQTYEPGMLMQK*AQLCSTRVFLV
Trigger: GACGAGGAAGACCCGGGTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522025.6
CDS TCA 72 bp CATGCTCACAGCCCGGTTTGTTCAGTGCACAGTAGTTaGTCCCTGAGGGGAAGAAGGGCAGACTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: HAHSPVCSVHSS*SLRGRRADFCR
Trigger: CCTGCAGAAGTCTGCCCTTCTTCCCCTCAGGGATCAACTACTGTGCACTGAACAAACCGGGCTGTGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522270.5
CDS GCA 72 bp CACAAGAGTCCAATTTTGCACACGTCTTCCCATCGCTaGGGAGCACGTGTCCCTCAGGACACTGACAGGCAA +
Preference number: 6 (lower is better)
Translates to: HKSPILHTSSHR*GARVPQDTDRQ
Trigger: TTGCCTGTCAGTGTCCTGAGGGACACGTGCTCCGCAGCGATGGGAAGACGTGTGCAAAATTGGACTCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS CCA 72 bp CTCAGAGTGAACTCTGTGTGGACCTGTGTGGAATACTaGAGCAGCCCCACTCGAGCGGCTTTGGGGGAAATT +
Preference number: 6 (lower is better)
Translates to: LRVNSVWTCVEY*SSPTRAALGEI
Trigger: AATTTCCCCCAAAGCCGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGTCCACACAGAGTTCACTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000518370.1
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS CAA 72 bp CGAGAGCTGTCAATGATGAAAACCAGGTCTGCCCGCTaGTTCTCACAGGAACTCTCCAGAAGGGCCGTCTGC +
Preference number: 6 (lower is better)
Translates to: RELSMMKTRSAR*FSQELSRRAVC
Trigger: GCAGACGGCCCTTCTGGAGAGTTCCTGTGAGAACAAGCGGGCAGACCTGGTTTTCATCATTGACAGCTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 72 bp CTTGTTTGCACCTGCAGACGTATGAGCCAGGGATGTTaGTGCAGAAGTGGGCACAGTTATGCTCCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: LVCTCRRMSQGC*CRSGHSYAPGC
Trigger: GCACCCTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAGGTGCAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 72 bp TGGGGTCTCTGCCCACTCCCACAGGAAAGCTTGCTATaGGTTAGGGCTCCACAAATGCAGGCAAAACCCAAG +
Preference number: 6 (lower is better)
Translates to: WGLCPLPQESLL*VRAPQMQAKPK
Trigger: CTTGGGTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGCTTTCCTGTGGGAGTGGGCAGAGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS CCA 72 bp AGGGTGCTGCACATATGGGCCGTGCACAACTTCTTCTaGAACACGGAGGTCAGCGTCTCAATCTGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: RVLHIWAVHNFF*NTEVSVSIWLK
Trigger: TTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCACGGCCCATATGTGCAGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp CTGCAGACGTATGAGCCAGGGATGTTGATGCAGAAGTaGGCACAGTTATGCTCCAGGGTGCTGCACATATGG +
Preference number: 6 (lower is better)
Translates to: LQTYEPGMLMQK*AQLCSRVLHIW
Trigger: CCATATGTGCAGCACCCTGGAGCATAACTGTGCCCACTTCTGCATCAACATCCCTGGCTCATACGTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp TTGAGGTCCTCGTTGATGAGGAAGCCTTCTGAGCACTaGCAGACGAAGGAATCCTCCGTGTTCAGACACAGC +
Preference number: 6 (lower is better)
Translates to: LRSSLMRKPSEH*QTKESSVFRHS
Trigger: GCTGTGTCTGAACACGGAGGATTCCTTCGTCTGCCAGTGCTCAGAAGGCTTCCTCATCAACGAGGACCTCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000522270.5
ENST00000524308.5
CDS CCA 72 bp GAGAAGTGGGTTATTAGGGCTGCCATTTCACTCAACTaGGTAAACGATGGGGTCTCTGCCCACTCCCACAGG +
Preference number: 6 (lower is better)
Translates to: EKWVIRAAISLN*VNDGVSAHSHR
Trigger: CCTGTGGGAGTGGGCAGAGACCCCATCGTTTACCCAGTTGAGTGAAATGGCAGCCCTAATAACCCACTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS CAA 72 bp TGGAACACGGAGGTCAGCGTCTCAATCTGGCTGAAATaGGCCACAAGGAAGACATGGTCCTCATGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: WNTEVSVSIWLK*ATRKTWSSWGS
Trigger: TGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521041.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 90 bp TCCACCTCGGACTTCCTCTTGAAGGTCTTGAGGGAGAACTCATTCTaGACAGTGCTGCCATATTGGAGCAGGCCCACTCGGGTGACATCA +
Preference number: 6 (lower is better)
Translates to: STSDFLLKVLRENSF*TVLPYWSRPTRVTS
Trigger: TGATGTCACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 72 bp TCTTCTGGAACACGGAGGTCAGCGTCTCAATCTGGCTaGAATTGGCCACAAGGAAGACATGGTCCTCATGGG +
Preference number: 6 (lower is better)
Translates to: SSGTRRSASQSG*NWPQGRHGPHG
Trigger: CCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521041.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS GCA 72 bp GAGGACGATCTGTCCGAGGATCAGCAGAAAGCAGCCTaGGAGCATCTTTTCCATTTTCAAGGCGAGCAAGAG +
Preference number: 6 (lower is better)
Translates to: EDDLSEDQQKAA*EHLFHFQGEQE
Trigger: CTCTTGCTCGCCTTGAAAATGGAAAAGATGCTCGCAGGCTGCTTTCTGCTGATCCTCGGACAGATCGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS GCA 72 bp AACGATGGGGTCTCTGCCCACTCCCACAGGAAAGCTTaGTATGAGTTAGGGCTCCACAAATGCAGGCAAAAC +
Preference number: 6 (lower is better)
Translates to: NDGVSAHSHRKA*YELGLHKCRQN
Trigger: GTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGCTTTCCTGTGGGAGTGGGCAGAGACCCCATCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS CCA 72 bp GAATTCTCCATCTCCAGCTGCATCCAACCACGTGTGTaGGCTCTCTCTTGGACGCATCTGTTTGCCCTGAAA +
Preference number: 6 (lower is better)
Translates to: EFSISSCIQPRV*ALSWTHLFALK
Trigger: TTTCAGGGCAAACAGATGCGTCCAAGAGAGAGCCCACACACGTGGTTGGATGCAGCTGGAGATGGAGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS CAA 72 bp CTTGAGGGAGAACTCATTCTTGACAGTGCTGCCATATaGGAGCAGGCCCACTCGGGTGACATCAGGACCAAT +
Preference number: 6 (lower is better)
Translates to: LEGELILDSAAI*EQAHSGDIRTN
Trigger: ATTGGTCCTGATGTCACCCGAGTGGGCCTGCTCCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 72 bp GACTTCCTCTTGAAGGTCTTGAGGGAGAACTCATTCTaGACAGTGCTGCCATATTGGAGCAGGCCCACTCGG +
Preference number: 6 (lower is better)
Translates to: DFLLKVLRENSF*TVLPYWSRPTR
Trigger: CCGAGTGGGCCTGCTCCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 90 bp ATCCTCTTGACAGCACGCTCCACCTCGGACTTCCTCTTGAAGGTCTaGAGGGAGAACTCATTCTTGACAGTGCTGCCATATTGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: ILLTARSTSDFLLKV*RENSFLTVLPYWSR
Trigger: CCTGCTCCAATATGGCAGCACTGTCAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGTGGAGCGTGCTGTCAAGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 90 bp AAGACATGGTCCTCATGGGGCTCACTCCCAATGGACTTCAAGGTGTaGAAGTCTACCTGGCCCACACCAATGGCAAAGATTAGGATGCCC +
Preference number: 6 (lower is better)
Translates to: KTWSSWGSLPMDFKV*KSTWPTPMAKIRMP
Trigger: GGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 90 bp AACTTCTTCTGGAACACGGAGGTCAGCGTCTCAATCTGGCTGAAATaGGCCACAAGGAAGACATGGTCCTCATGGGGCTCACTCCCAATG +
Preference number: 6 (lower is better)
Translates to: NFFWNTEVSVSIWLK*ATRKTWSSWGSLPM
Trigger: CATTGGGAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521041.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 90 bp GTGTGGACCTGTGTGGAATACTGGAGCAGCCCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAATCTATAATTCCAGTGACAAACTGC +
Preference number: 6 (lower is better)
Translates to: VWTCVEYWSSPTRAA*GEIVKESIIPVTNC
Trigger: GCAGTTTGTCACTGGAATTATAGATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGGGCTGCTCCAGTATTCCACACAGGTCCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000518370.1
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 72 bp CCTCATGGGGCTCACTCCCAATGGACTTCAAGGTGTTaGAGTCTACCTGGCCCACACCAATGGCAAAGATTA +
Preference number: 6 (lower is better)
Translates to: PHGAHSQWTSRC*SLPGPHQWQRL
Trigger: TAATCTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS TCA 72 bp ACCACCACCAAACACATACTGCCCAGGCCTTTTCCTTaGACTGGAATTCTCCATCTCCAGCTGCATCCAACC +
Preference number: 6 (lower is better)
Translates to: TTTKHILPRPFP*TGILHLQLHPT
Trigger: GGTTGGATGCAGCTGGAGATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCAGTATGTGTTTGGTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS CCA 72 bp TCACTCCCAATGGACTTCAAGGTGTTGAAGTCTACCTaGCCCACACCAATGGCAAAGATTAGGATGCCCGTG +
Preference number: 6 (lower is better)
Translates to: SLPMDFKVLKST*PTPMAKIRMPV
Trigger: CACGGGCATCCTAATCTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp TGGCTGAAATTGGCCACAAGGAAGACATGGTCCTCATaGGGCTCACTCCCAATGGACTTCAAGGTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: WLKLATRKTWSS*GSLPMDFKVLK
Trigger: CTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp CATTCACACAGAGCTGCTCACAGTTGTGGTCCTCCATaGCACACAGATCCTGGATTCTGCAAGTCGTCTGAT +
Preference number: 6 (lower is better)
Translates to: HSHRAAHSCGPP*HTDPGFCKSSD
Trigger: ATCAGACGACTTGCAGAATCCAGGATCTGTGTGCCATGGAGGACCACAACTGTGAGCAGCTCTGTGTGAATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp ATATCTGTGTTGCACTGTTGGCTGTTGGACCGTTTTTaGCAGTTCCCCTGCTGGAGAGTCCTGTCTTCCATC +
Preference number: 6 (lower is better)
Translates to: ISVLHCWLLDRF*QFPCWRVLSSI
Trigger: GATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGCCAACAGTGCAACACAGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518154.5
ENST00000519582.5
ENST00000521689.5
ENST00000523561.1
CDS CCA 72 bp TCCATGGCACACAGATCCTGGATGCACAACTTCTTCTaGAACACGGAGGTCAGCGTCTCAATCTGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SMAHRSWMHNFF*NTEVSVSIWLK
Trigger: TTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTTGTGCATCCAGGATCTGTGTGCCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521041.5
CDS CCA 72 bp CATTCACACAGAGCTGCTCACAGTTGTGGTCCTCCATaGCACACAGATCCTGGATGCACAACTTCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: HSHRAAHSCGPP*HTDPGCTTSSG
Trigger: TCCAGAAGAAGTTGTGCATCCAGGATCTGTGTGCCATGGAGGACCACAACTGTGAGCAGCTCTGTGTGAATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521041.5
CDS CAA 72 bp GCCCACTCGGGTGACATCAGGACCAATGTCCAAGAATaGCAAGATGTCCACGATGAACTCCTTGACCTTTGC +
Preference number: 6 (lower is better)
Translates to: AHSGDIRTNVQE*QDVHDELLDLC
Trigger: GCAAAGGTCAAGGAGTTCATCGTGGACATCTTGCAATTCTTGGACATTGGTCCTGATGTCACCCGAGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 72 bp ACAGCACGCTCCACCTCGGACTTCCTCTTGAAGGTCTaGAGGGAGAACTCATTCTTGACAGTGCTGCCATAT +
Preference number: 6 (lower is better)
Translates to: TARSTSDFLLKV*RENSFLTVLPY
Trigger: ATATGGCAGCACTGTCAAGAATGAGTTCTCCCTCAAGACCTTCAAGAGGAAGTCCGAGGTGGAGCGTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 72 bp TCCTCATGGGGCTCACTCCCAATGGACTTCAAGGTGTaGAAGTCTACCTGGCCCACACCAATGGCAAAGATT +
Preference number: 6 (lower is better)
Translates to: SSWGSLPMDFKV*KSTWPTPMAKI
Trigger: AATCTTTGCCATTGGTGTGGGCCAGGTAGACTTCAACACCTTGAAGTCCATTGGGAGTGAGCCCCATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 72 bp GATATCTGTGTTGCACTGTTGGCTGTTGGACCGTTTTaGGCAGTTCCCCTGCTGGAGAGTCCTGTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: DICVALLAVGPF*AVPLLESPVFH
Trigger: ATGGAAGACAGGACTCTCCAGCAGGGGAACTGCCAAAAACGGTCCAACAGCCAACAGTGCAACACAGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518154.5
ENST00000519582.5
ENST00000521689.5
ENST00000523561.1
CDS CAA 90 bp TTGGAGCAGGCCCACTCGGGTGACATCAGGACCAATGTCCAAGAATaGCAAGATGTCCACGATGAACTCCTTGACCTTTGCATAGTCATG +
Preference number: 6 (lower is better)
Translates to: LEQAHSGDIRTNVQE*QDVHDELLDLCIVM
Trigger: CATGACTATGCAAAGGTCAAGGAGTTCATCGTGGACATCTTGCAATTCTTGGACATTGGTCCTGATGTCACCCGAGTGGGCCTGCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS GCA 72 bp CCCACTCGGGTGACATCAGGACCAATGTCCAAGAATTaGAAGATGTCCACGATGAACTCCTTGACCTTTGCA +
Preference number: 6 (lower is better)
Translates to: PTRVTSGPMSKN*KMSTMNSLTFA
Trigger: TGCAAAGGTCAAGGAGTTCATCGTGGACATCTTGCAATTCTTGGACATTGGTCCTGATGTCACCCGAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000520160.1
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CCA 72 bp AACTTCTTCTGGAACACGGAGGTCAGCGTCTCAATCTaGCTGAAATTGGCCACAAGGAAGACATGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: NFFWNTEVSVSI*LKLATRKTWSS
Trigger: TGAGGACCATGTCTTCCTTGTGGCCAATTTCAGCCAGATTGAGACGCTGACCTCCGTGTTCCAGAAGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521041.5
ENST00000521689.5
ENST00000523490.1
ENST00000524308.5
CDS CAA 72 bp TGTGTGGAATACTGGAGCAGCCCCACTCGAGCGGCTTaGGGGGAAATTGTCAAGGAATCTATAATTCCAGTG +
Preference number: 6 (lower is better)
Translates to: CVEYWSSPTRAA*GEIVKESIIPV
Trigger: CACTGGAATTATAGATTCCTTGACAATTTCCCCCAAAGCCGCTCGAGTGGGGCTGCTCCAGTATTCCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000518370.1
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS CAA 90 bp GCTTGCTATGAGTTAGGGCTCCACAAATGCAGGCAAAACCCAAGCTaGCCTTTTCGAGACCATGCCCTCTCTTTCATCATGTCTGAAAGC +
Preference number: 6 (lower is better)
Translates to: ACYELGLHKCRQNPS*PFRDHALSFIMSES
Trigger: GCTTTCAGACATGATGAAAGAGAGGGCATGGTCTCGAAAAGGCAAGCTTGGGTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS TCA 72 bp ACAGATCCTGGATTCTGCAAGTCGTCTGATCCGAGTTaGGAATGTAGCCTTGTTTGCACCTGCAGACGTATG +
Preference number: 6 (lower is better)
Translates to: TDPGFCKSSDPS*ECSLVCTCRRM
Trigger: CATACGTCTGCAGGTGCAAACAAGGCTACATTCTCAACTCGGATCAGACGACTTGCAGAATCCAGGATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254898.7
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000523490.1
ENST00000524308.5
CDS TCA 72 bp GTGTGTGGGCTCTCTCTTGGACGCATCTGTTTGCCCTaGAAACTAGATTTCCTCTCTGCAGTTATCCATCAG +
Preference number: 6 (lower is better)
Translates to: VCGLSLGRICLP*KLDFLSAVIHQ
Trigger: CTGATGGATAACTGCAGAGAGGAAATCTAGTTTTCAGGGCAAACAGATGCGTCCAAGAGAGAGCCCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS TCA 72 bp AGTAGTCCACAGTTCTGCAAGTCGTCTGATCCGAGTTaGGAATGTAGCCTTGTTTGCACCTGCAGACGTATG +
Preference number: 6 (lower is better)
Translates to: SSPQFCKSSDPS*ECSLVCTCRRM
Trigger: CATACGTCTGCAGGTGCAAACAAGGCTACATTCTCAACTCGGATCAGACGACTTGCAGAACTGTGGACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518154.5
CDS GCA 72 bp GTTGACGCACTCATGCTCACAGCCCGGTTTGTTCAGTaGACAGTAGTTGATCCTTCTGCAGGTTTTCTTATC +
Preference number: 6 (lower is better)
Translates to: VDALMLTARFVQ*TVVDPSAGFLI
Trigger: GATAAGAAAACCTGCAGAAGGATCAACTACTGTGCACTGAACAAACCGGGCTGTGAGCATGAGTGCGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521041.5
ENST00000521689.5
ENST00000522025.6
ENST00000523490.1
CDS GCA 72 bp AACCTTCAAAGCACTGGCACACAAACGAATCTTCACTaGTTACACACGAATGTTCACAACCGTGGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: NLQSTGTQTNLH*LHTNVHNRGPP
Trigger: TGGGGGACCACGGTTGTGAACATTCGTGTGTAAGCAGTGAAGATTCGTTTGTGTGCCAGTGCTTTGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS GCA 72 bp CACAGGAAAGCTTGCTATGAGTTAGGGCTCCACAAATaGAGGCAAAACCCAAGCTTGCCTTTTCGAGACCAT +
Preference number: 6 (lower is better)
Translates to: HRKACYELGLHK*RQNPSLPFRDH
Trigger: ATGGTCTCGAAAAGGCAAGCTTGGGTTTTGCCTGCATTTGTGGAGCCCTAACTCATAGCAAGCTTTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS CCA 72 bp GAATCTTCACTGCTTACACACGAATGTTCACAACCGTaGTCCCCCAGAGCACAAGAGTCCAATTTTGCACAC +
Preference number: 6 (lower is better)
Translates to: ESSLLTHECSQP*SPRAQESNFAH
Trigger: GTGTGCAAAATTGGACTCTTGTGCTCTGGGGGACCACGGTTGTGAACATTCGTGTGTAAGCAGTGAAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000254898.7
ENST00000518154.5
ENST00000520016.5
ENST00000521689.5
ENST00000521952.5
ENST00000522025.6
ENST00000524308.5
CDS TCA 72 bp AACTGCAGTTTGGATTTGAAGTCTTCCAATGGTAAATaGGTCATCAGCCTCGTGCTTCTACATGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: NCSLDLKSSNGK*VISLVLLHAQA
Trigger: GGCCTGGGCATGTAGAAGCACGAGGCTGATGACTCATTTACCATTGGAAGACTTCAAATCCAAACTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS TCA 72 bp CACTTAGACTGGGATCTAACTGGTGAGCCGGGGACATaGGTACAAGGAAAAATAGGCAGAACTGCTATCTGT +
Preference number: 6 (lower is better)
Translates to: HLDWDLTGEPGT*VQGKIGRTAIC
Trigger: ACAGATAGCAGTTCTGCCTATTTTTCCTTGTACTCATGTCCCCGGCTCACCAGTTAGATCCCAGTCTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523561.1
CDS GCA 72 bp TATTTTCAGGGTCAACGACCACCACCAAACACATACTaGCCAGGCCTTTTCCTTGAACTGGAATTCTCCATC +
Preference number: 6 (lower is better)
Translates to: YFQGQRPPPNTY*PGLFLELEFSI
Trigger: GATGGAGAATTCCAGTTCAAGGAAAAGGCCTGGGCAGTATGTGTTTGGTGGTGGTCGTTGACCCTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519585.5
CDS TCA 72 bp TTCCATCGGAGTCTTCTAGAGCTGAGCAGAAAAAGATaGCCAAAAGAAGTGATGGTTGTCCACAGGCATGTG +
Preference number: 6 (lower is better)
Translates to: FHRSLLELSRKR*PKEVMVVHRHV
Trigger: CACATGCCTGTGGACAACCATCACTTCTTTTGGTCATCTTTTTCTGCTCAGCTCTAGAAGACTCCGATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523561.1
CDS GCA 72 bp GTTGGTAGGCTCTTCTTGGACGCTCCGAGCAGGGCATaGATAGTTGGAATTTTTCATCACTTTAATCACTGT +
Preference number: 6 (lower is better)
Translates to: VGRLFLDAPSRA*IVGIFHHFNHC
Trigger: ACAGTGATTAAAGTGATGAAAAATTCCAACTATGCATGCCCTGCTCGGAGCGTCCAAGAAGAGCCTACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520160.1
CDS CAA 72 bp AGTCCATGCAGAAAGGCATTAATTTTAACAGTGGGCTaGGAAGAACTAGGTACGCCCCTTTCCACTCCAATT +
Preference number: 6 (lower is better)
Translates to: SPCRKALILTVG*EELGTPLSTPI
Trigger: AATTGGAGTGGAAAGGGGCGTACCTAGTTCTTCCAAGCCCACTGTTAAAATTAATGCCTTTCTGCATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523561.1
CDS TCA 72 bp AGCACTAATCTTATTTTGACAACTGCAGTTTGGATTTaGAGTCTTCCAATGGTAAATGAGTCATCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: STNLILTTAVWI*SLPMVNESSAS
Trigger: CGAGGCTGATGACTCATTTACCATTGGAAGACTTCAAATCCAAACTGCAGTTGTCAAAATAAGATTAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518238.1
CDS GCA 72 bp GAAATTGTCAAGGAATCTATAATTCCAGTGACAAACTaGTTCACGACCTCAAAATTCTCTTCTCCAAGACTC +
Preference number: 6 (lower is better)
Translates to: EIVKESIIPVTN*FTTSKFSSPRL
Trigger: GAGTCTTGGAGAAGAGAATTTTGAGGTCGTGAAGCAGTTTGTCACTGGAATTATAGATTCCTTGACAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000254898.7
ENST00000517321.5
ENST00000518154.5
ENST00000518370.1
ENST00000520016.5
ENST00000521689.5
ENST00000522025.6
ENST00000524308.5
CDS CAA 72 bp GTTGAATGGGAAAGCTTTTGTGTAGACCGTAAAAGATaGTCTTCTTCAAACAGATATCTGTGTTGCACTGTT +
Preference number: 6 (lower is better)
Translates to: VEWESFCVDRKR*SSSNRYLCCTV
Trigger: AACAGTGCAACACAGATATCTGTTTGAAGAAGACAATCTTTTACGGTCTACACAAAAGCTTTCCCATTCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518154.5
ENST00000519582.5
ENST00000521689.5
ENST00000523561.1