RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MATK (Homo sapiens)

Ensembl gene IDs: ENSG00000007264

Ensembl transcript IDs: ENST00000310132.11, ENST00000395040.6, ENST00000395045.6, ENST00000585778.5, ENST00000587180.1, ENST00000588983.5, ENST00000590028.5, ENST00000590493.5, ENST00000590821.1, ENST00000590849.1, ENST00000590980.1, ENST00000591059.1, ENST00000592300.1, ENST00000592612.1, ENST00000619596.4

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCCACTCTCTCGGTCCTCTGGGGCCAA +
Preference number: 1 (lower is better)
Translates to: QEDDLPAWTLLGPGQ*PHAALSTLSVLWGQ
Trigger: TTGGCCCCAGAGGACCGAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 2 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHTLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 2 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAATLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 2 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPTLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR CAA 90 bp CCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCGG +
Preference number: 2 (lower is better)
Translates to: PAVGTRRMTCPPGPS*GLVSAPTPHSPLSR
Trigger: CCGAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 2 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTTLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCC +
Preference number: 2 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRALGPGQ*PHAALS
Trigger: GGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR GCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCACCAGGAGGATGACTTaGCCGCCTGGACCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPTRRMT*PPGPSL
Trigger: CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 2 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRATLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCGCCTGGACCCTCCTTaGGCCTGGTCAGTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRARLDPP*AWSVPP
Trigger: TGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR CCA 72 bp CCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTaGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCC +
Preference number: 3 (lower is better)
Translates to: PCCGHQEDDLPA*TLLGPGQCPHA
Trigger: GGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCC +
Preference number: 3 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPPPGPS*GLVSAP
Trigger: GGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
3UTR CCA 72 bp AATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTaGGGTGTCCACGGGCCGCCCAGAGCCCCCTACGTG +
Preference number: 3 (lower is better)
Translates to: NPSLSGDHPSQV*GVHGPPRAPYV
Trigger: CACGTAGGGGGCTCTGGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGTCGGCGTCCTGCCCTaGGACGGAGGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTVGVLP*DGGWGT
Trigger: GGTGCCCCAGCCTCCGTCTCAGGGCAGGACGCCGAC...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAGTCGGCGTCCTGCCCTaGGACGGAGGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAVGVLP*DGGWGT
Trigger: GGTGCCCCAGCCTCCGTCTCAGGGCAGGACGCCGAC...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGAGCCGTCGGCGTCCTaGCCTGAGACGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTEPSAS*PETEAG
Trigger: CCCAGCCTCCGTCTCAGGGCAGGACGCCGACGGCTC...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGTAACCAGCCCGCCCTaGCCAGCTCCTCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTVTSPP*PAPPRP
Trigger: CGGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGTTAC...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGGGCTTCGGGGCGAGGTaGAGCCGTCGGCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPGFGAR*SRRRPA
Trigger: GGCAGGACGCCGACGGCTCCACCTCGCCCCGAAGCC...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGGCTTCGGGGCGAGGTaGAGCCGTCGGCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGGFGAR*SRRRPA
Trigger: GGCAGGACGCCGACGGCTCCACCTCGCCCCGAAGCC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGTCGGCGTCCTGCCCTaGGACGGAGGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAVGVLP*DGGWGT
Trigger: GGTGCCCCAGCCTCCGTCTCAGGGCAGGACGCCGAC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGTCGGCGTCCTGCCCTaGGACGGAGGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTVGVLP*DGGWGT
Trigger: GGTGCCCCAGCCTCCGTCTCAGGGCAGGACGCCGAC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGCTTCTCGGCCAGTTTaGGGAAGGGTGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTASRPV*GRVAGG
Trigger: CCCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGC...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCGCTTCTCGGCCAGTTTaGGGAAGGGTGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLASRPV*GRVAGG
Trigger: CCCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGC...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCTGGGGCACCTGCACTaGGTAGCTCCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLLGHLH*VAPGPA
Trigger: AGCTGGCCCGGGAGCTACGCAGTGCAGGTGCCCCAG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGAGCCGTCGGCGTCCTaGCCTGAGACGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSEPSAS*PETEAG
Trigger: CCCAGCCTCCGTCTCAGGGCAGGACGCCGACGGCTC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAGAGCCGTCGGCGTCCTaGCCTGAGACGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAEPSAS*PETEAG
Trigger: CCCAGCCTCCGTCTCAGGGCAGGACGCCGACGGCTC...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTLGPGQ*PHAALS
Trigger: GGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGGCTTCGGGGCGAGGTaGAGCCGTCGGCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAGFGAR*SRRRPA
Trigger: GGCAGGACGCCGACGGCTCCACCTCGCCCCGAAGCC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTTCGGGGCGAGGTaGAGCCGTCGGCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLGFGAR*SRRRPA
Trigger: GGCAGGACGCCGACGGCTCCACCTCGCCCCGAAGCC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTTLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGACCCTCCTTGGGCCTaGTCAGTGCCCCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHDPPWA*SVPPRR
Trigger: GCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAGACCCTCCTTGGGCCTaGTCAGTGCCCCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAADPPWA*SVPPRR
Trigger: GCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTC...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCGCCTGGACCCTCCTTaGGCCTGGTCAGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLRLDPP*AWSVPP
Trigger: TGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCCAGAGCCCCCTACGTaGGCCAGCCCCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHPEPPT*ASPCCG
Trigger: CCCACAGCAGGGGCTGGCCCACGTAGGGGGCTCTGG...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCATCCTTCGCAGGTCTaGGGTGTCCACGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLHPSQV*GVHGPP
Trigger: GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTAGGCCTCCAGGATGGTaGCCACGTCGCCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTRPPGW*PRRPCG
Trigger: TCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCT...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCGGCCTCATCGATTGTaGGGTGGCCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTRPHRL*GGRRGA
Trigger: TGCACCGCGACGGCCACCTCACAATCGATGAGGCCG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCCATCCTCGGGAGGCTaGAGCTGCTGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTPSSGG*SCWTAS
Trigger: GGAGGCTGTCCAGCAGCTGCAGCCTCCCGAGGATGG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGCTTCTCGGCCAGTTTaGGGAAGGGTGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSASRPV*GRVAGG
Trigger: CCCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTGGGGCACCTGCACTaGGTAGCTCCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAALGHLH*VAPGPA
Trigger: AGCTGGCCCGGGAGCTACGCAGTGCAGGTGCCCCAG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGGAGCCGTCGGCGTCCTaGCCTGAGACGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGEPSAS*PETEAG
Trigger: CCCAGCCTCCGTCTCAGGGCAGGACGCCGACGGCTC...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGAGCCGTCGGCGTCCTaGCCTGAGACGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTEPSAS*PETEAG
Trigger: CCCAGCCTCCGTCTCAGGGCAGGACGCCGACGGCTC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSLGPGQ*PHAALS
Trigger: GGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCGGGGACGCTGGGAATaGCCTGCCACAGGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHRGRWE*PATGQS
Trigger: CGACTGGCCTGTGGCAGGCCATTCCCAGCGTCCCCG...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGAAGGCCAGCTCCCCTaGCTTGGGGCGGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSEGQLP*LGAGVL
Trigger: GAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGGAAGGCCAGCTCCCCTaGCTTGGGGCGGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPEGQLP*LGAGVL
Trigger: GAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTC...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGTAACCAGCCCGCCCTaGCCAGCTCCTCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAVTSPP*PAPPRP
Trigger: CGGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGTTAC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCGTAACCAGCCCGCCCTaGCCAGCTCCTCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLVTSPP*PAPPRP
Trigger: CGGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGTTAC...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGGCTTCGGGGCGAGGTaGAGCCGTCGGCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPGFGAR*SRRRPA
Trigger: GGCAGGACGCCGACGGCTCCACCTCGCCCCGAAGCC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCATGGGGTCAGGGCTCCTaGCTTCGGGGCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAWGQGS*LRGEVE
Trigger: CTCCACCTCGCCCCGAAGCCAGGAGCCCTGACCCCA...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGTGGGGTCAGGGCTCCTaGCTTCGGGGCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPWGQGS*LRGEVE
Trigger: CTCCACCTCGCCCCGAAGCCAGGAGCCCTGACCCCA...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAAAGGGCCCCACCGGGTaGGGTCAGGGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAKGPTG*GQGSWL
Trigger: AAGCCAGGAGCCCTGACCCCACCCGGTGGGGCCCTT...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTAAGGGCCCCACCGGGTaGGGTCAGGGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSKGPTG*GQGSWL
Trigger: AAGCCAGGAGCCCTGACCCCACCCGGTGGGGCCCTT...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACAAGGGCCCCACCGGGTaGGGTCAGGGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHKGPTG*GQGSWL
Trigger: AAGCCAGGAGCCCTGACCCCACCCGGTGGGGCCCTT...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCGCCTGGACCCTCCTTaGGCCTGGTCAGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSRLDPP*AWSVPP
Trigger: TGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCAGAGCCCCCTACGTaGGCCAGCCCCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGPEPPT*ASPCCG
Trigger: CCCACAGCAGGGGCTGGCCCACGTAGGGGGCTCTGG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCCAGAGCCCCCTACGTaGGCCAGCCCCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPPEPPT*ASPCCG
Trigger: CCCACAGCAGGGGCTGGCCCACGTAGGGGGCTCTGG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACCCAGAGCCCCCTACGTaGGCCAGCCCCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHPEPPT*ASPCCG
Trigger: CCCACAGCAGGGGCTGGCCCACGTAGGGGGCTCTGG...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCAGAGCCCCCTACGTaGGCCAGCCCCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPEPPT*ASPCCG
Trigger: CCCACAGCAGGGGCTGGCCCACGTAGGGGGCTCTGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCGCGTTTCAGGCCCGTaGACTCCGCAGCCCAGACGG +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSRVSGP*TPQPRR
Trigger: CCGTCTGGGCTGCGGAGTCCACGGGCCTGAAACGCG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCGCGCTCCAGTTCTCTaGCGGGGAGGGAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPRAPVL*RGGRGV
Trigger: CACCCCTCTCCCTCCCCGCCAGAGAACTGGAGCGCG...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR TCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCGCACGCGGTAGTGGATaGCGTCGCGGCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLARGSG*RRGQSS
Trigger: TGAGCTTTGGCCGCGACGTCATCCACTACCGCGTGC...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCCATCCTCGGGAGGCTaGAGCTGCTGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSPSSGG*SCWTAS
Trigger: GGAGGCTGTCCAGCAGCTGCAGCCTCCCGAGGATGG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGCTTCTCGGCCAGTTTaGGGAAGGGTGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTASRPV*GRVAGG
Trigger: CCCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTGGGGCACCTGCACTaGGTAGCTCCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGLGHLH*VAPGPA
Trigger: AGCTGGCCCGGGAGCTACGCAGTGCAGGTGCCCCAG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPLGPGQ*PHAALS
Trigger: GGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGLGPGQ*PHAALS
Trigger: GGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACACGTGGGCCAGCCCCTaGTGTGGGCACCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHTWASP*CGHQED
Trigger: ATCCTCCTGGTGCCCACAGCAGGGGCTGGCCCACGT...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAACGTGGGCCAGCCCCTaGTGTGGGCACCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAATWASP*CGHQED
Trigger: ATCCTCCTGGTGCCCACAGCAGGGGCTGGCCCACGT...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACAGCCTGGTGTCTTCCTaGCACCCGCCGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHSLVSS*HPPACS
Trigger: GGAGCAGGCCGGCGGGTGGCAGGAAGACACCAGGCT...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR CCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCAGAAGGGTCGGGGAGTaGGGGAAAGCGGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLRRVGE*GKAGGA
Trigger: GGCGCCTCCCGCTTTCCCCCACTCCCCGACCCTTCT...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGAGAAGGGTCGGGGAGTaGGGGAAAGCGGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTRRVGE*GKAGGA
Trigger: GGCGCCTCCCGCTTTCCCCCACTCCCCGACCCTTCT...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCGGAGCTGGGTGCCACTaGACCGAGCCTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLGAGCH*TEPGSS
Trigger: GGAAGAACCAGGCTCGGTCCAGTGGCACCCAGCTCC...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCATTTGGTGATACACTaGGTGCCCGGGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLHLVIH*VPGAQR
Trigger: GCGCTGGGCCCCGGGCACCCAGTGTATCACCAAATG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCATTTGGTGATACACTaGGTGCCCGGGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTHLVIH*VPGAQR
Trigger: GCGCTGGGCCCCGGGCACCCAGTGTATCACCAAATG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGAAGGCCAGCTCCCCTaGCTTGGGGCGGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAEGQLP*LGAGVL
Trigger: GAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGAAGGCCAGCTCCCCTaGCTTGGGGCGGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLEGQLP*LGAGVL
Trigger: GAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTTGCTGGACAGCCTCCTaGCCCGAGATCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTCWTAS*PEIFPW
Trigger: CCACGGGAAGATCTCGGGCCAGGAGGCTGTCCAGCA...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGTAACCAGCCCGCCCTaGCCAGCTCCTCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPVTSPP*PAPPRP
Trigger: CGGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGTTAC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGGTAACCAGCCCGCCCTaGCCAGCTCCTCCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQVTSPP*PAPPRP
Trigger: CGGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGTTAC...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACTGGGGTCAGGGCTCCTaGCTTCGGGGCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHWGQGS*LRGEVE
Trigger: CTCCACCTCGCCCCGAAGCCAGGAGCCCTGACCCCA...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTGGGGTCAGGGCTCCTaGCTTCGGGGCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGWGQGS*LRGEVE
Trigger: CTCCACCTCGCCCCGAAGCCAGGAGCCCTGACCCCA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCTGGGGTCAGGGCTCCTaGCTTCGGGGCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAWGQGS*LRGEVE
Trigger: CTCCACCTCGCCCCGAAGCCAGGAGCCCTGACCCCA...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGACTCTCTCGGTCCTCTaGGGCCAAGGGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGTLSVL*GQGPHR
Trigger: CCGGTGGGGCCCTTGGCCCCAGAGGACCGAGAGAGT...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGGACCCTCCTTGGGCCTaGTCAGTGCCCCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQDPPWA*SVPPRR
Trigger: GCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTC...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGACCCTCCTTGGGCCTaGTCAGTGCCCCCACGCCGC +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPDPPWA*SVPPRR
Trigger: GCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCGCCTGGACCCTCCTTaGGCCTGGTCAGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTRLDPP*AWSVPP
Trigger: TGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCGATGACTTGCCCGCCTaGACCCTCCTTGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLDDLPA*TLLGPG
Trigger: ACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCATCCTTCGCAGGTCTaGGGTGTCCACGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPHPSQV*GVHGPP
Trigger: GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACCATCCTTCGCAGGTCTaGGGTGTCCACGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHHPSQV*GVHGPP
Trigger: GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATG...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCATCCTTCGCAGGTCTaGGGTGTCCACGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGHPSQV*GVHGPP
Trigger: GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCCGGGAACCGCGGCCTaGTGGGACGAGGGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPPGTAA*WDEGCG
Trigger: TCCGCAACCCTCGTCCCACCAGGCCGCGGTTCCCGG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395045.6
3UTR CAA 72 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPS*GLVSAPTPHSP
Trigger: TGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCTGTGCTCGCATTTGGTaGTACACTGGGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLCARIW*YTGCPG
Trigger: CCCCGGGCACCCAGTGTATCACCAAATGCGAGCACA...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCAGGCCTCCAGGATGGTaGCCACGTCGCCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLRPPGW*PRRPCG
Trigger: TCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCT...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGCACGCGGTAGTGGATaGCGTCGCGGCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSARGSG*RRGQSS
Trigger: TGAGCTTTGGCCGCGACGTCATCCACTACCGCGTGC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGCACGCGGTAGTGGATaGCGTCGCGGCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHARGSG*RRGQSS
Trigger: TGAGCTTTGGCCGCGACGTCATCCACTACCGCGTGC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGCACGCGGTAGTGGATaGCGTCGCGGCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGARGSG*RRGQSS
Trigger: TGAGCTTTGGCCGCGACGTCATCCACTACCGCGTGC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCGGCCTCATCGATTGTaGGGTGGCCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPRPHRL*GGRRGA
Trigger: TGCACCGCGACGGCCACCTCACAATCGATGAGGCCG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGAGGCGGTCCCGGCTaGACAACTTGGAGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAARGGPG*TTWSEL
Trigger: CAACTCGCTCCAAGTTGTGCAGCCGGGACCGCCTCG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000585778.5
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCATCCTCGGGAGGCTaGAGCTGCTGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGPSSGG*SCWTAS
Trigger: GGAGGCTGTCCAGCAGCTGCAGCCTCCCGAGGATGG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCCATCCTCGGGAGGCTaGAGCTGCTGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLPSSGG*SCWTAS
Trigger: GGAGGCTGTCCAGCAGCTGCAGCCTCCCGAGGATGG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCATCCTCGGGAGGCTaGAGCTGCTGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPSSGG*SCWTAS
Trigger: GGAGGCTGTCCAGCAGCTGCAGCCTCCCGAGGATGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGCGGCCAGGTCGCGGTaGACAAGCTTCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSAARSR*TSFLLS
Trigger: GGAGAGCAAGAAGCTTGTGCACCGCGACCTGGCCGC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGGCGGCCAGGTCGCGGTaGACAAGCTTCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPAARSR*TSFLLS
Trigger: GGAGAGCAAGAAGCTTGTGCACCGCGACCTGGCCGC...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCTGGGGCACCTGCACTaGGTAGCTCCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQLGHLH*VAPGPA
Trigger: AGCTGGCCCGGGAGCTACGCAGTGCAGGTGCCCCAG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCTTGGGCCTGGTCAGTaGCCCCACGCCGCACTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPLGPGQ*PHAALS
Trigger: GGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGACGTGGGCCAGCCCCTaGTGTGGGCACCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGTWASP*CGHQED
Trigger: ATCCTCCTGGTGCCCACAGCAGGGGCTGGCCCACGT...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGGAGCTGGGTGCCACTaGACCGAGCCTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGGAGCH*TEPGSS
Trigger: GGAAGAACCAGGCTCGGTCCAGTGGCACCCAGCTCC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCAGGAGGTAGGGAGCTaGGTGCCACTGGACCGAGCC +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPQEVGS*VPLDRA
Trigger: GGCTCGGTCCAGTGGCACCCAGCTCCCTACCTCCTG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCAGGAGGTAGGGAGCTaGGTGCCACTGGACCGAGCC +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLQEVGS*VPLDRA
Trigger: GGCTCGGTCCAGTGGCACCCAGCTCCCTACCTCCTG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCGGGGACGCTGGGAATaGCCTGCCACAGGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPRGRWE*PATGQS
Trigger: CGACTGGCCTGTGGCAGGCCATTCCCAGCGTCCCCG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACAGTCGGGGACGCTaGGAATGGCCTGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPHSRGR*EWPATG
Trigger: GCCTGTGGCAGGCCATTCCCAGCGTCCCCGACTGTG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGCACAGTCGGGGACGCTaGGAATGGCCTGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLHSRGR*EWPATG
Trigger: GCCTGTGGCAGGCCATTCCCAGCGTCCCCGACTGTG...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCATTTGGTGATACACTaGGTGCCCGGGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGHLVIH*VPGAQR
Trigger: GCGCTGGGCCCCGGGCACCCAGTGTATCACCAAATG...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGTGCTGGACAGCCTCCTaGCCCGAGATCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPCWTAS*PEIFPW
Trigger: CCACGGGAAGATCTCGGGCCAGGAGGCTGTCCAGCA...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTTGCTGGACAGCCTCCTaGCCCGAGATCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSCWTAS*PEIFPW
Trigger: CCACGGGAAGATCTCGGGCCAGGAGGCTGTCCAGCA...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGAAGGGCCCCACCGGGTaGGGTCAGGGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQKGPTG*GQGSWL
Trigger: AAGCCAGGAGCCCTGACCCCACCCGGTGGGGCCCTT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCGCCTGGACCCTCCTTaGGCCTGGTCAGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPRLDPP*AWSVPP
Trigger: TGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGATGACTTGCCCGCCTaGACCCTCCTTGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHDDLPA*TLLGPG
Trigger: ACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGATGACTTGCCCGCCTaGACCCTCCTTGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGDDLPA*TLLGPG
Trigger: ACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCATCCTTCGCAGGTCTaGGGTGTCCACGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQHPSQV*GVHGPP
Trigger: GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGAGGCCTCCAGGATGGTaGCCACGTCGCCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQRPPGW*PRRPCG
Trigger: TCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCAGGCCTCCAGGATGGTaGCCACGTCGCCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPRPPGW*PRRPCG
Trigger: TCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGGTGTGGTGCTTaGCGCGGTACCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLHWCGA*RGTSSC
Trigger: ACAAGAGCTGGTACCGCGTCAAGCACCACACCAGTG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCACGCGGTAGTGGATaGCGTCGCGGCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHARGSG*RRGQSS
Trigger: TGAGCTTTGGCCGCGACGTCATCCACTACCGCGTGC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCGGCCTCATCGATTGTaGGGTGGCCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPRPHRL*GGRRGA
Trigger: TGCACCGCGACGGCCACCTCACAATCGATGAGGCCG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGGAGCCCGTCCATATaGGAAGACCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAARSPSI*EDLPEQ
Trigger: CTGCTCTGGGAGGTCTTCTCATATGGACGGGCTCCG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCGGAGCCCGTCCATATaGGAAGACCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHRSPSI*EDLPEQ
Trigger: CTGCTCTGGGAGGTCTTCTCATATGGACGGGCTCCG...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACCGAGGCGGTCCCGGCTaGACAACTTGGAGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHRGGPG*TTWSEL
Trigger: CAACTCGCTCCAAGTTGTGCAGCCGGGACCGCCTCG...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000585778.5
CDS-3UTR GCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCGAGGCGGTCCCGGCTaGACAACTTGGAGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLRGGPG*TTWSEL
Trigger: CAACTCGCTCCAAGTTGTGCAGCCGGGACCGCCTCG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000585778.5
CDS-3UTR GCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCGGCTTGGGGCGGGTGTaGTCGCATTTGGTGATACAC +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLGLGRV*SHLVIH
Trigger: GTGTATCACCAAATGCGAGCACACCCGCCCCAAGCC...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTFTATF*PRYSPC
Trigger: GCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAA...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCATGCCCTCGGCCACGTaGAGAGAAAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLMPSAT*RENCRS
Trigger: GCTCCTGCAGTTTTCTCTGCACGTGGCCGAGGGCAT...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCGCGGCCAGGTCGCGGTaGACAAGCTTCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLAARSR*TSFLLS
Trigger: GGAGAGCAAGAAGCTTGTGCACCGCGACCTGGCCGC...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGCGGCCAGGTCGCGGTaGACAAGCTTCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLAARSR*TSFLLS
Trigger: GGAGAGCAAGAAGCTTGTGCACCGCGACCTGGCCGC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCGGCCAGGTCGCGGTaGACAAGCTTCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHAARSR*TSFLLS
Trigger: GGAGAGCAAGAAGCTTGTGCACCGCGACCTGGCCGC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGACGTGGGCCAGCCCCTaGTGTGGGCACCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQTWASP*CGHQED
Trigger: ATCCTCCTGGTGCCCACAGCAGGGGCTGGCCCACGT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGCTTCTCCAGCCCCCTaGAGCCTGGTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAASPAP*SLVSSC
Trigger: GCAGGAAGACACCAGGCTGCAGGGGGCTGGAGAAGC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCCCGGCTGCACAACTTaGAGCGAGTTGCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTPGCTT*SELLRF
Trigger: GAAACGGAGCAACTCGCTCCAAGTTGTGCAGCCGGG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGGGCACACTGAGCAAGTaGTCACAGTCGGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPGTLSK*SQSGTL
Trigger: CAGCGTCCCCGACTGTGACCACTTGCTCAGTGTGCC...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCTCCTGTCCACTGGTGTaGTGCTTGACGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLSCPLV*CLTRYQ
Trigger: CTGGTACCGCGTCAAGCACCACACCAGTGGACAGGA...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCCGAGATCTTCCCGTaGAACCACGGCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAPEIFP*NHGMRL
Trigger: CAGCCTCATGCCGTGGTTCCACGGGAAGATCTCGGG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCCCGAGATCTTCCCGTaGAACCACGGCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPPEIFP*NHGMRL
Trigger: CAGCCTCATGCCGTGGTTCCACGGGAAGATCTCGGG...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTGCTGGACAGCCTCCTaGCCCGAGATCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGCWTAS*PEIFPW
Trigger: CCACGGGAAGATCTCGGGCCAGGAGGCTGTCCAGCA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTCATCGATTGTGAGGTaGCCGTCGCGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGSSIVR*PSRCST
Trigger: CGTGCTGCACCGCGACGGCCACCTCACAATCGATGA...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCATCATCGATTGTGAGGTaGCCGTCGCGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAASSIVR*PSRCST
Trigger: CGTGCTGCACCGCGACGGCCACCTCACAATCGATGA...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPPPRPT*SRVSAL
Trigger: CAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGG...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTACAATGTACAGCCCCTaGTGCAGGATCACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTTMYSP*CRITPR
Trigger: CCTGGGCGTGATCCTGCACCAGGGGCTGTACATTGT...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGATGACTTGCCCGCCTaGACCCTCCTTGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHDDLPA*TLLGPG
Trigger: ACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCGATGACTTGCCCGCCTaGACCCTCCTTGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPDDLPA*TLLGPG
Trigger: ACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCTGTGCTCGCATTTGGTaGTACACTGGGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLCARIW*YTGCPG
Trigger: CCCCGGGCACCCAGTGTATCACCAAATGCGAGCACA...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTGTGCTCGCATTTGGTaGTACACTGGGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGCARIW*YTGCPG
Trigger: CCCCGGGCACCCAGTGTATCACCAAATGCGAGCACA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGTTGCATCTTCGTCATaGCGGCCGTCTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSVASSS*RPSRPG
Trigger: TCCTGGACGAGACGGCCGTCATGACGAAGATGCAAC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGTTGCATCTTCGTCATaGCGGCCGTCTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHVASSS*RPSRPG
Trigger: TCCTGGACGAGACGGCCGTCATGACGAAGATGCAAC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGAAAACTGCAGGAGCTaGGCGGTGTTCACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHENCRS*AVFTRA
Trigger: AGCCCTCGTGAACACCGCTCAGCTCCTGCAGTTTTC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGCGGAGCCCGTCCATATaGGAAGACCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLRSPSI*EDLPEQ
Trigger: CTGCTCTGGGAGGTCTTCTCATATGGACGGGCTCCG...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGGAGCCCGTCCATATaGGAAGACCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGRSPSI*EDLPEQ
Trigger: CTGCTCTGGGAGGTCTTCTCATATGGACGGGCTCCG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAGGCTTGGGGCGGGTGTaGTCGCATTTGGTGATACAC +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAGLGRV*SHLVIH
Trigger: GTGTATCACCAAATGCGAGCACACCCGCCCCAAGCC...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCATGTCCACTGGTGTGGTaGTTGACGCGGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAACPLVW*LTRYQL
Trigger: GAGCTGGTACCGCGTCAAGCACCACACCAGTGGACA...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTTGTCCACTGGTGTGGTaGTTGACGCGGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSCPLVW*LTRYQL
Trigger: GAGCTGGTACCGCGTCAAGCACCACACCAGTGGACA...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSFTATF*PRYSPC
Trigger: GCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAA...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGFTATF*PRYSPC
Trigger: GCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAA...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGATGTACAGCCCCTGGTaGAGGATCACGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPMYSPW*RITPRR
Trigger: TCTCCTGGGCGTGATCCTGCACCAGGGGCTGTACAT...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAATGTACAGCCCCTGGTaGAGGATCACGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAMYSPW*RITPRR
Trigger: TCTCCTGGGCGTGATCCTGCACCAGGGGCTGTACAT...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCATGCCCTCGGCCACGTaGAGAGAAAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGMPSAT*RENCRS
Trigger: GCTCCTGCAGTTTTCTCTGCACGTGGCCGAGGGCAT...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCTCTCCAGGTACTCCATaGCCTCGGCCACGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSASPGTP*PRPRAE
Trigger: CTCTGCACGTGGCCGAGGGCATGGAGTACCTGGAGA...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGTCTCCAGGTACTCCATaGCCTCGGCCACGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTSPGTP*PRPRAE
Trigger: CTCTGCACGTGGCCGAGGGCATGGAGTACCTGGAGA...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCTCTCCAGGTACTCCATaGCCTCGGCCACGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPSPGTP*PRPRAE
Trigger: CTCTGCACGTGGCCGAGGGCATGGAGTACCTGGAGA...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCACCAGGAGGATGACTTaGCCGCCTGGACCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSATRRMT*PPGPSL
Trigger: CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGT...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCACCAGGAGGATGACTTaGCCGCCTGGACCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLTRRMT*PPGPSL
Trigger: CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGT...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCGAGATCTTCCCGTaGAACCACGGCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAPEIFP*NHGMRL
Trigger: CAGCCTCATGCCGTGGTTCCACGGGAAGATCTCGGG...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCCGAGATCTTCCCGTaGAACCACGGCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPEIFP*NHGMRL
Trigger: CAGCCTCATGCCGTGGTTCCACGGGAAGATCTCGGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCTCATCGATTGTGAGGTaGCCGTCGCGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPSSIVR*PSRCST
Trigger: CGTGCTGCACCGCGACGGCCACCTCACAATCGATGA...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCTCATCGATTGTGAGGTaGCCGTCGCGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLSSIVR*PSRCST
Trigger: CGTGCTGCACCGCGACGGCCACCTCACAATCGATGA...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCCCGTGTTTCCGCTTTaGTCTCACCAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTPVFPL*SHQLGA
Trigger: TGCACCAAGCTGGTGAGACCAAAGCGGAAACACGGG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPPRPT*SRVSAL
Trigger: CAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPPPRPT*SRVSAL
Trigger: CAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGPPRPT*SRVSAL
Trigger: CAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCGCAGAATCACAGCCGTaGAATGCCCGCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPAESQP*NARQET
Trigger: GGTTTCCTGGCGGGCATTTCACGGCTGTGATTCTGC...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR TCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCTGTGCTCGCATTTGGTaGTACACTGGGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPCARIW*YTGCPG
Trigger: CCCCGGGCACCCAGTGTATCACCAAATGCGAGCACA...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACTGGTGTGGTGCTTaGCGCGGTACCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPHWCGA*RGTSSC
Trigger: ACAAGAGCTGGTACCGCGTCAAGCACCACACCAGTG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCACTGGTGTGGTGCTTaGCGCGGTACCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGHWCGA*RGTSSC
Trigger: ACAAGAGCTGGTACCGCGTCAAGCACCACACCAGTG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCACTGGTGTGGTGCTTaGCGCGGTACCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTHWCGA*RGTSSC
Trigger: ACAAGAGCTGGTACCGCGTCAAGCACCACACCAGTG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGTTGCATCTTCGTCATaGCGGCCGTCTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHVASSS*RPSRPG
Trigger: TCCTGGACGAGACGGCCGTCATGACGAAGATGCAAC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGGTTGCATCTTCGTCATaGCGGCCGTCTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGVASSS*RPSRPG
Trigger: TCCTGGACGAGACGGCCGTCATGACGAAGATGCAAC...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCGTTGCATCTTCGTCATaGCGGCCGTCTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPVASSS*RPSRPG
Trigger: TCCTGGACGAGACGGCCGTCATGACGAAGATGCAAC...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTGCTCACGTGCTCCATaGCAATGTACAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGCSRAP*QCTAPG
Trigger: ACCAGGGGCTGTACATTGTCATGGAGCACGTGAGCA...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGAAAACTGCAGGAGCTaGGCGGTGTTCACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHENCRS*AVFTRA
Trigger: AGCCCTCGTGAACACCGCTCAGCTCCTGCAGTTTTC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGAAAACTGCAGGAGCTaGGCGGTGTTCACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTENCRS*AVFTRA
Trigger: AGCCCTCGTGAACACCGCTCAGCTCCTGCAGTTTTC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGAAAACTGCAGGAGCTaGGCGGTGTTCACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAENCRS*AVFTRA
Trigger: AGCCCTCGTGAACACCGCTCAGCTCCTGCAGTTTTC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGGCTTGGGGCGGGTGTaGTCGCATTTGGTGATACAC +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTGLGRV*SHLVIH
Trigger: GTGTATCACCAAATGCGAGCACACCCGCCCCAAGCC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGTGTCCACTGGTGTGGTaGTTGACGCGGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLCPLVW*LTRYQL
Trigger: GAGCTGGTACCGCGTCAAGCACCACACCAGTGGACA...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGFTATF*PRYSPC
Trigger: GCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAFTATF*PRYSPC
Trigger: GCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAA...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCATGTACAGCCCCTGGTaGAGGATCACGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLMYSPW*RITPRR
Trigger: TCTCCTGGGCGTGATCCTGCACCAGGGGCTGTACAT...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCGAAAGTTCACCAGGTTaGCCTTGCTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLESSPG*PCSRAP
Trigger: TGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTC...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGAAAGTTCACCAGGTTaGCCTTGCTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTESSPG*PCSRAP
Trigger: TGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTC...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACATGCCCTCGGCCACGTaGAGAGAAAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHMPSAT*RENCRS
Trigger: GCTCCTGCAGTTTTCTCTGCACGTGGCCGAGGGCAT...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCTCTCCAGGTACTCCATaGCCTCGGCCACGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPSPGTP*PRPRAE
Trigger: CTCTGCACGTGGCCGAGGGCATGGAGTACCTGGAGA...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCTTCTCGGCCAGTTTaGGGAAGGGTGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAASRPV*GRVAGG
Trigger: CCCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGC...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCTGGGGCACCTGCACTaGGTAGCTCCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRALGHLH*VAPGPA
Trigger: AGCTGGCCCGGGAGCTACGCAGTGCAGGTGCCCCAG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGACCAGGAGGATGACTTaGCCGCCTGGACCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQTRRMT*PPGPSL
Trigger: CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGTCCGTTTCCTCATTTTaGGGGCGAAGAAGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPSVSSF*GRRRVG
Trigger: CCCGACCCTTCTTCGCCCCCAAAATGAGGAAACGGA...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CCA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCCACTGGACCGAGCCTaGTTCTTCCTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTPLDRA*FFLFSA
Trigger: AGCAGAAAACAGGAAGAACCAGGCTCGGTCCAGTGG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGGCACACTGAGCAAGTaGTCACAGTCGGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPGTLSK*SQSGTL
Trigger: CAGCGTCCCCGACTGTGACCACTTGCTCAGTGTGCC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCTCCTGTCCACTGGTGTaGTGCTTGACGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPSCPLV*CLTRYQ
Trigger: CTGGTACCGCGTCAAGCACCACACCAGTGGACAGGA...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTCCTGTCCACTGGTGTaGTGCTTGACGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGSCPLV*CLTRYQ
Trigger: CTGGTACCGCGTCAAGCACCACACCAGTGGACAGGA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGTCCTGTCCACTGGTGTaGTGCTTGACGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLSCPLV*CLTRYQ
Trigger: CTGGTACCGCGTCAAGCACCACACCAGTGGACAGGA...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPPPRPT*SRVSAL
Trigger: CAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCACAATGTACAGCCCCTaGTGCAGGATCACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSATMYSP*CRITPR
Trigger: CCTGGGCGTGATCCTGCACCAGGGGCTGTACATTGT...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGACAATGTACAGCCCCTaGTGCAGGATCACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGTMYSP*CRITPR
Trigger: CCTGGGCGTGATCCTGCACCAGGGGCTGTACATTGT...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCACAATGTACAGCCCCTaGTGCAGGATCACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPTMYSP*CRITPR
Trigger: CCTGGGCGTGATCCTGCACCAGGGGCTGTACATTGT...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCAAGGGCCCCACCGGGTaGGGTCAGGGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAKGPTG*GQGSWL
Trigger: AAGCCAGGAGCCCTGACCCCACCCGGTGGGGCCCTT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCAGGCCTCCAGGATGGTaGCCACGTCGCCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRARPPGW*PRRPCG
Trigger: TCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCGGCCTCATCGATTGTaGGGTGGCCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRARPHRL*GGRRGA
Trigger: TGCACCGCGACGGCCACCTCACAATCGATGAGGCCG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCTGCTCACGTGCTCCATaGCAATGTACAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLCSRAP*QCTAPG
Trigger: ACCAGGGGCTGTACATTGTCATGGAGCACGTGAGCA...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCTGCTCACGTGCTCCATaGCAATGTACAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSACSRAP*QCTAPG
Trigger: ACCAGGGGCTGTACATTGTCATGGAGCACGTGAGCA...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCTGCTCACGTGCTCCATaGCAATGTACAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPCSRAP*QCTAPG
Trigger: ACCAGGGGCTGTACATTGTCATGGAGCACGTGAGCA...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCGACACCTCTTTCAGTaGCATTTTAGGGTACGGAGC +
Preference number: 4 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLRHLFQ*HFRVRS
Trigger: GCTCCGTACCCTAAAATGTCACTGAAAGAGGTGTCG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGGGCTTGGGGCGGGTGTaGTCGCATTTGGTGATACAC +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQGLGRV*SHLVIH
Trigger: GTGTATCACCAAATGCGAGCACACCCGCCCCAAGCC...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGACCAGGTTCTCGTGTTaGATCTTCGTCATGACGGCC +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPTRFSC*IFVMTA
Trigger: GGCCGTCATGACGAAGATGCAACACGAGAACCTGGT...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGATGTACAGCCCCTGGTaGAGGATCACGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQMYSPW*RITPRR
Trigger: TCTCCTGGGCGTGATCCTGCACCAGGGGCTGTACAT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAGAAAGTTCACCAGGTTaGCCTTGCTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAESSPG*PCSRAP
Trigger: TGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTC...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGATGCCCTCGGCCACGTaGAGAGAAAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQMPSAT*RENCRS
Trigger: GCTCCTGCAGTTTTCTCTGCACGTGGCCGAGGGCAT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCATGCCCTCGGCCACGTaGAGAGAAAACTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPMPSAT*RENCRS
Trigger: GCTCCTGCAGTTTTCTCTGCACGTGGCCGAGGGCAT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCTCCCTCGCCGAGGTCTaGCTTCTCTTCGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPSLAEV*LLFVQQ
Trigger: CTGCTGAACGAAGAGAAGGCAGACCTCGGCGAGGGA...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCCACTGGACCGAGCCTaGTTCTTCCTGTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGPLDRA*FFLFSA
Trigger: AGCAGAAAACAGGAAGAACCAGGCTCGGTCCAGTGG...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR CCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTCCTGTCCACTGGTGTaGTGCTTGACGCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQSCPLV*CLTRYQ
Trigger: CTGGTACCGCGTCAAGCACCACACCAGTGGACAGGA...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCCGTGTTTCCGCTTTaGTCTCACCAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGPVFPL*SHQLGA
Trigger: TGCACCAAGCTGGTGAGACCAAAGCGGAAACACGGG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCCGTGTTTCCGCTTTaGTCTCACCAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPVFPL*SHQLGA
Trigger: TGCACCAAGCTGGTGAGACCAAAGCGGAAACACGGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCACAATGTACAGCCCCTaGTGCAGGATCACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPTMYSP*CRITPR
Trigger: CCTGGGCGTGATCCTGCACCAGGGGCTGTACATTGT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGACACCTCTTTCAGTaGCATTTTAGGGTACGGAGC +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAARHLFQ*HFRVRS
Trigger: GCTCCGTACCCTAAAATGTCACTGAAAGAGGTGTCG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGACCAGGTTCTCGTGTTaGATCTTCGTCATGACGGCC +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGTRFSC*IFVMTA
Trigger: GGCCGTCATGACGAAGATGCAACACGAGAACCTGGT...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCACCAGGTTCTCGTGTTaGATCTTCGTCATGACGGCC +
Preference number: 4 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPTRFSC*IFVMTA
Trigger: GGCCGTCATGACGAAGATGCAACACGAGAACCTGGT...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTTTGCCCTTGCTCACGTaGTCCATGACAATGTACAGC +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSLPLLT*SMTMYS
Trigger: GCTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTTGCCCTTGCTCACGTaGTCCATGACAATGTACAGC +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGLPLLT*SMTMYS
Trigger: GCTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTTGCCCTTGCTCACGTaGTCCATGACAATGTACAGC +
Preference number: 4 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHLPLLT*SMTMYS
Trigger: GCTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCATTGCCCTTGCTCACGTaGTCCATGACAATGTACAGC +
Preference number: 4 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAALPLLT*SMTMYS
Trigger: GCTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGAAAGTTCACCAGGTTaGCCTTGCTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTESSPG*PCSRAP
Trigger: TGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGAAAGTTCACCAGGTTaGCCTTGCTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLESSPG*PCSRAP
Trigger: TGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCTGCTGGACAGCCTCCTaGCCCGAGATCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRACWTAS*PEIFPW
Trigger: CCACGGGAAGATCTCGGGCCAGGAGGCTGTCCAGCA...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCCCGTGTTTCCGCTTTaGTCTCACCAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQPVFPL*SHQLGA
Trigger: TGCACCAAGCTGGTGAGACCAAAGCGGAAACACGGG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCCCGTGTTTCCGCTTTaGTCTCACCAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPPVFPL*SHQLGA
Trigger: TGCACCAAGCTGGTGAGACCAAAGCGGAAACACGGG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTGTCACATCACACTTaGTATTCTTCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSLSHHT*YSSRPP
Trigger: AGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCGACACCTCTTTCAGTaGCATTTTAGGGTACGGAGC +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTRHLFQ*HFRVRS
Trigger: GCTCCGTACCCTAAAATGTCACTGAAAGAGGTGTCG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTGCTCTAGCACCCCATaGAGACTTTCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGCSSTP*RLSPLP
Trigger: AGGAAGAGGAGAAAGTCTTCATGGGGTGCTAGAGCA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR GCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCATCACAGCCGTGAAATaGCCGCCAGGAAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPITAVK*PPGNQR
Trigger: TCTCTGGTTTCCTGGCGGGCATTTCACGGCTGTGAT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGATCACAGCCGTGAAATaGCCGCCAGGAAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQITAVK*PPGNQR
Trigger: TCTCTGGTTTCCTGGCGGGCATTTCACGGCTGTGAT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000585778.5
CDS-3UTR GCA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPNVKC*RFSNQP
Trigger: GGGCTGGTTACTGAACCTGCAGCATTTGACATTGGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAPNVKC*RFSNQP
Trigger: GGGCTGGTTACTGAACCTGCAGCATTTGACATTGGG...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGCTCCCAATGTCAAATaGTGCAGGTTCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGAPNVK*CRFSNQ
Trigger: CTGGTTACTGAACCTGCAGCATTTGACATTGGGAGC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGGCTCCCAATGTCAAATaGTGCAGGTTCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPAPNVK*CRFSNQ
Trigger: CTGGTTACTGAACCTGCAGCATTTGACATTGGGAGC...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGTTGCCCTTGCTCACGTaGTCCATGACAATGTACAGC +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLLPLLT*SMTMYS
Trigger: GCTGTACATTGTCATGGAGCACGTGAGCAAGGGCAA...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCTCTCCAGGTACTCCATaGCCTCGGCCACGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRASPGTP*PRPRAE
Trigger: CTCTGCACGTGGCCGAGGGCATGGAGTACCTGGAGA...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCACCAGGAGGATGACTTaGCCGCCTGGACCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRATRRMT*PPGPSL
Trigger: CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGCAGGGAAATGTCCCTaGATGAGAGGGACATTTAAG +
Preference number: 4 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGAGKCP*MRGTFK
Trigger: CTTAAATGTCCCTCTCATGCAGGGACATTTCCCTGC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR TCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCACTGGTGTGGTGCTTaGCGCGGTACCAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAHWCGA*RGTSSC
Trigger: ACAAGAGCTGGTACCGCGTCAAGCACCACACCAGTG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCTGTCACATCACACTTaGTATTCTTCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLLSHHT*YSSRPP
Trigger: AGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGAAAACTGCAGGAGCTaGGCGGTGTTCACGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAENCRS*AVFTRA
Trigger: AGCCCTCGTGAACACCGCTCAGCTCCTGCAGTTTTC...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCGACACCTCTTTCAGTaGCATTTTAGGGTACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPRHLFQ*HFRVRS
Trigger: GCTCCGTACCCTAAAATGTCACTGAAAGAGGTGTCG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCAACTTGGAGCGAGTTaGTCCGTTTCCTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAQLGAS*SVSSFW
Trigger: CCAAAATGAGGAAACGGAGCAACTCGCTCCAAGTTG...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQPNVKC*RFSNQP
Trigger: GGGCTGGTTACTGAACCTGCAGCATTTGACATTGGG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGCTCCCAATGTCAAATaGTGCAGGTTCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAAPNVK*CRFSNQ
Trigger: CTGGTTACTGAACCTGCAGCATTTGACATTGGGAGC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGCTCCCAATGTCAAATaGTGCAGGTTCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLAPNVK*CRFSNQ
Trigger: CTGGTTACTGAACCTGCAGCATTTGACATTGGGAGC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCTCCCTCGCCGAGGTCTaGCTTCTCTTCGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRASLAEV*LLFVQQ
Trigger: CTGCTGAACGAAGAGAAGGCAGACCTCGGCGAGGGA...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395045.6
ENST00000619596.4
CDS-3UTR TCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCTGTCACATCACACTTaGTATTCTTCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQLSHHT*YSSRPP
Trigger: AGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCTGTCACATCACACTTaGTATTCTTCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPLSHHT*YSSRPP
Trigger: AGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCTGCTCACGTGCTCCATaGCAATGTACAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRACSRAP*QCTAPG
Trigger: ACCAGGGGCTGTACATTGTCATGGAGCACGTGAGCA...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCAACTTGGAGCGAGTTaGTCCGTTTCCTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQQLGAS*SVSSFW
Trigger: CCAAAATGAGGAAACGGAGCAACTCGCTCCAAGTTG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCTCCGTTTCCTCATTTTaGGGGCGAAGAAGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRASVSSF*GRRRVG
Trigger: CCCGACCCTTCTTCGCCCCCAAAATGAGGAAACGGA...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCACCAGGTTCTCGTGTTaGATCTTCGTCATGACGGCC +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRATRFSC*IFVMTA
Trigger: GGCCGTCATGACGAAGATGCAACACGAGAACCTGGT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAPNVKC*RFSNQP
Trigger: GGGCTGGTTACTGAACCTGCAGCATTTGACATTGGG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR TCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCTGTCACATCACACTTaGTATTCTTCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRALSHHT*YSSRPP
Trigger: AGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR GCA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCTCCCAATGTCAAATaGTGCAGGTTCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAAPNVK*CRFSNQ
Trigger: CTGGTTACTGAACCTGCAGCATTTGACATTGGGAGC...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS CCA 90 bp GGGCCGCGCACACGCTTTTCGGCCACACGCGCACAGCCCTCCACGTaGACGCGCGGGTACACACGCCCGGGGCTCGTAGCCGCGCACACC +
Preference number: 5 (lower is better)
Translates to: GPRTRFSATRAQPST*TRGYTRPGLVAAHT
Trigger: GGTGTGCGCGGCTACGAGCCCCGGGCGTGTGTACCCGCGCGTCCACGTGGAGGGCTGTGCGCGTGTGGCCGAAAAGCGTGTGCGCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS-3UTR CAA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLPPGPS*GLVSAP
Trigger: GGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS CCA 90 bp TGGTGTCTTCCTGCCACCCGCCGGCCTGCTCCGGGAACCGCGGCCTaGTGGGACGAGGGTTGCGGAGGACGGGTCAGGAGCGACCGCGTT +
Preference number: 5 (lower is better)
Translates to: WCLPATRRPAPGTAA*WDEGCGGRVRSDRV
Trigger: AACGCGGTCGCTCCTGACCCGTCCTCCGCAACCCTCGTCCCACCAGGCCGCGGTTCCCGGAGCAGGCCGGCGGGTGGCAGGAAGACACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395045.6
ENST00000590821.1
ENST00000590849.1
ENST00000592300.1
ENST00000592612.1
CDS-3UTR CAA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSPPGPS*GLVSAP
Trigger: GGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGGGCCCAGCGCCTCGTaGGCATCCTGGCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGGPSAS*ASWLRR
Trigger: CCGTCTCAGCCAGGATGCCAACGAGGCGCTGGGCCC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTGGGCCCAGCGCCTCGTaGGCATCCTGGCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSGPSAS*ASWLRR
Trigger: CCGTCTCAGCCAGGATGCCAACGAGGCGCTGGGCCC...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGGGCCCAGCGCCTCGTaGGCATCCTGGCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHGPSAS*ASWLRR
Trigger: CCGTCTCAGCCAGGATGCCAACGAGGCGCTGGGCCC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGCCAGCTCCCCTGGCTaGGGGCGGGTGTGCTCGCAT +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHASSPG*GRVCSH
Trigger: ATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTGTGACCACGTCGCCCTaGCGGAAGGCCAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTVTTSP*RKASSP
Trigger: AGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCAC...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHPPGPS*GLVSAP
Trigger: GGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGG...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLPPGPS*GLVSAP
Trigger: GGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGG...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGGCCCAGCGCCTCGTaGGCATCCTGGCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLGPSAS*ASWLRR
Trigger: CCGTCTCAGCCAGGATGCCAACGAGGCGCTGGGCCC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGCCAGCTCCCCTGGCTaGGGGCGGGTGTGCTCGCAT +
Preference number: 5 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAASSPG*GRVCSH
Trigger: ATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCAGCTCCCCTGGCTaGGGGCGGGTGTGCTCGCAT +
Preference number: 5 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHASSPG*GRVCSH
Trigger: ATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGCCAGCTCCCCTGGCTaGGGGCGGGTGTGCTCGCAT +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTASSPG*GRVCSH
Trigger: ATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGTGACCACGTCGCCCTaGCGGAAGGCCAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHVTTSP*RKASSP
Trigger: AGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCAC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCGTGACCACGTCGCCCTaGCGGAAGGCCAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGVTTSP*RKASSP
Trigger: AGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCAC...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCCCTTCCGCTCGGCTTaGGCCAGGCCAAAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTPFRSA*ARPKSL
Trigger: CAGCGACTTTGGCCTGGCCAAAGCCGAGCGGAAGGG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTAGCTTCTCGGCCAGTTaGCGGAAGGGTGGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSSFSAS*RKGGRR
Trigger: CCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGCT...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCCGCCTGGACCCTCCTaGGGCCTGGTCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQPPGPS*GLVSAP
Trigger: GGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGGGCCCAGCGCCTCGTaGGCATCCTGGCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPGPSAS*ASWLRR
Trigger: CCGTCTCAGCCAGGATGCCAACGAGGCGCTGGGCCC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGGTGACCACGTCGCCCTaGCGGAAGGCCAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGVTTSP*RKASSP
Trigger: AGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCAC...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGTGACCACGTCGCCCTaGCGGAAGGCCAGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLVTTSP*RKASSP
Trigger: AGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCAC...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCACGCGGTACCAGCTCTaGTTCTCGCAGGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLTRYQL*FSQASR
Trigger: CCTGGAGGCCTGCGAGAACAAGAGCTGGTACCGCGT...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTACGCGGTACCAGCTCTaGTTCTCGCAGGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTTRYQL*FSQASR
Trigger: CCTGGAGGCCTGCGAGAACAAGAGCTGGTACCGCGT...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGCATGAGGCTGAGCTaGGGGTCTGCGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHGMRLS*GSAERA
Trigger: GGCCCTCTCCGCAGACCCCAAGCTCAGCCTCATGCC...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCGGCATGAGGCTGAGCTaGGGGTCTGCGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLGMRLS*GSAERA
Trigger: GGCCCTCTCCGCAGACCCCAAGCTCAGCCTCATGCC...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCGGCATGAGGCTGAGCTaGGGGTCTGCGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPGMRLS*GSAERA
Trigger: GGCCCTCTCCGCAGACCCCAAGCTCAGCCTCATGCC...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGGGCATGAGGCTGAGCTaGGGGTCTGCGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTGMRLS*GSAERA
Trigger: GGCCCTCTCCGCAGACCCCAAGCTCAGCCTCATGCC...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCCTTCCGCTCGGCTTaGGCCAGGCCAAAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAPFRSA*ARPKSL
Trigger: CAGCGACTTTGGCCTGGCCAAAGCCGAGCGGAAGGG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCAGCTTCTCGGCCAGTTaGCGGAAGGGTGGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLSFSAS*RKGGRR
Trigger: CCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGCT...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTGGTGGGACGAGGGTaGCGGAGGACGGGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGLVGRG*RRTGQE
Trigger: CTCCTGACCCGTCCTCCGCAACCCTCGTCCCACCAG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR CAA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCAGGAGGGAGAGGGGTGTaGCTTCTCCAGCCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAGGRGV*LLQPPA
Trigger: TGCAGGGGGCTGGAGAAGCAACACCCCTCTCCCTCC...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395045.6
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGGCATGAGGCTGAGCTaGGGGTCTGCGGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPGMRLS*GSAERA
Trigger: GGCCCTCTCCGCAGACCCCAAGCTCAGCCTCATGCC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCTCCTCCTCGGCCGACTaGGTCCCGTGTTTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLSSSAD*VPCFRF
Trigger: AAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGA...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCCTTCCGCTCGGCTTaGGCCAGGCCAAAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPFRSA*ARPKSL
Trigger: CAGCGACTTTGGCCTGGCCAAAGCCGAGCGGAAGGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGGTGAACTTCCCGTGTTaGAGAGCCTCGGGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPVNFPC*RASGAV
Trigger: GACGGCGCCCGAGGCTCTCAAACACGGGAAGTTCAC...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCAGCTTCTCGGCCAGTTaGCGGAAGGGTGGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPSFSAS*RKGGRR
Trigger: CCGCCGGCCACCCTTCCGCAAACTGGCCGAGAAGCT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCAGGAGGATGACTaGCCCGCCTGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPHQEDD*PAWTLL
Trigger: AAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCACCAGGAGGATGACTaGCCCGCCTGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHHQEDD*PAWTLL
Trigger: AAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCTGGTGAACCCGTGTTaGAGAGCCTCGGGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTLVNPC*RASGAV
Trigger: GACGGCGCCCGAGGCTCTCAAACACGGGTTCACCAG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585778.5
CDS TCA 90 bp GGGTGCCAGGCTCGGAGGAAGCGGGGGCTCACCAGAAGCTGCTGCTaGCCACGGGTCCCTCGCCGAGGTCTGCCTTCTCTTCGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GCQARRKRGLTRSCC*PRVPRRGLPSLRSA
Trigger: TGCTGAACGAAGAGAAGGCAGACCTCGGCGAGGGACCCGTGGTCAGCAGCAGCTTCTGGTGAGCCCCCGCTTCCTCCGAGCCTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395045.6
ENST00000619596.4
CDS GCA 90 bp CTGCGCGCAGACAAGCAAAGGACCACGTCCACGTGGAAACAGGTGTaGGCACACGTCCCCGCGCATCCGCGCGCACAAGCGCTCCACACC +
Preference number: 5 (lower is better)
Translates to: LRADKQRTTSTWKQV*AHVPAHPRAQALHT
Trigger: GGTGTGGAGCGCTTGTGCGCGCGGATGCGCGGGGACGTGTGCGCACACCTGTTTCCACGTGGACGTGGTCCTTTGCTTGTCTGCGCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CCA 90 bp GAGGGTTGCGGAGGACGGGTCAGGAGCGACCGCGTTTCAGGCCCGTaGACTCCGCAGCCCAGACGGTCCATCCATCTGCACCGAATCCCT +
Preference number: 5 (lower is better)
Translates to: EGCGGRVRSDRVSGP*TPQPRRSIHLHRIP
Trigger: AGGGATTCGGTGCAGATGGATGGACCGTCTGGGCTGCGGAGTCCACGGGCCTGAAACGCGGTCGCTCCTGACCCGTCCTCCGCAACCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395045.6
ENST00000590821.1
ENST00000590849.1
ENST00000592300.1
CDS CCA 90 bp GGCCTGGTGGCAGGAATCCTGTTTGCCTTCCCCGGGAGCCAGGGATaGGAACGGGAACTGTGGGTGGGAGGCTTCCGAGAGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GLVAGILFAFPGSQG*ERELWVGGFREPPL
Trigger: GAGAGGCGGCTCTCGGAAGCCTCCCACCCACAGTTCCCGTTCCCATCCCTGGCTCCCGGGGAAGGCAAACAGGATTCCTGCCACCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590980.1
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCGGGTGTGCTCGCATTaGGTGATACACTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHRVCSH*VIHWVP
Trigger: GGGCACCCAGTGTATCACCAAATGCGAGCACACCCG...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGGGTGTGCTCGCATTaGGTGATACACTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAARVCSH*VIHWVP
Trigger: GGGCACCCAGTGTATCACCAAATGCGAGCACACCCG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGACGCGGTACCAGCTCTaGTTCTCGCAGGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLTRYQL*FSQASR
Trigger: CCTGGAGGCCTGCGAGAACAAGAGCTGGTACCGCGT...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCACGCGGTACCAGCTCTaGTTCTCGCAGGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPTRYQL*FSQASR
Trigger: CCTGGAGGCCTGCGAGAACAAGAGCTGGTACCGCGT...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTTCCCGTGTTTCCGCTTaGGTCTCACCAGCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTSRVSA*VSPAWC
Trigger: GCACCAAGCTGGTGAGACCAAAGCGGAAACACGGGA...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCCTCCTCGGCCGACTaGGTCCCGTGTTTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHSSSAD*VPCFRF
Trigger: AAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGA...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTG +
Preference number: 5 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAALHGHL*PQVLTL
Trigger: CAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACCTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTG +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHLHGHL*PQVLTL
Trigger: CAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAG...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTG +
Preference number: 5 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSLHGHL*PQVLTL
Trigger: CAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAG...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCCCTTCCGCTCGGCTTaGGCCAGGCCAAAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPPFRSA*ARPKSL
Trigger: CAGCGACTTTGGCCTGGCCAAAGCCGAGCGGAAGGG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCGTGAACTTCCCGTGTTaGAGAGCCTCGGGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLVNFPC*RASGAV
Trigger: GACGGCGCCCGAGGCTCTCAAACACGGGAAGTTCAC...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCACCAGGAGGATGACTaGCCCGCCTGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLHQEDD*PAWTLL
Trigger: AAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGCACCAGGAGGATGACTaGCCCGCCTGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLHQEDD*PAWTLL
Trigger: AAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS CCA 90 bp CTCCAGGATGGTGACCACGTCGCCCTTGCGGAAGGCCAGCTCCCCTaGCTTGGGGCGGGTGTGCTCGCATTTGGTGATACACTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LQDGDHVALAEGQLP*LGAGVLAFGDTLGA
Trigger: GGCACCCAGTGTATCACCAAATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCACCATCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS CCA 90 bp GCTCGGACACAGCTGCGCGCAGACAAGCAAAGGACCACGTCCACGTaGAAACAGGTGTGCGCACACGTCCCCGCGCATCCGCGCGCACAA +
Preference number: 5 (lower is better)
Translates to: ARTQLRADKQRTTST*KQVCAHVPAHPRAQ
Trigger: TTGTGCGCGCGGATGCGCGGGGACGTGTGCGCACACCTGTTTCCACGTGGACGTGGTCCTTTGCTTGTCTGCGCGCAGCTGTGTCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS-3UTR CAA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTCCGTTTCCTCATTTaGGGGGCGAAGAAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGLRFLI*GAKKGR
Trigger: CCGACCCTTCTTCGCCCCCAAAATGAGGAAACGGAG...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCGGGTGTGCTCGCATTaGGTGATACACTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTRVCSH*VIHWVP
Trigger: GGGCACCCAGTGTATCACCAAATGCGAGCACACCCG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCGGGTGTGCTCGCATTaGGTGATACACTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLRVCSH*VIHWVP
Trigger: GGGCACCCAGTGTATCACCAAATGCGAGCACACCCG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCACGCGGTACCAGCTCTaGTTCTCGCAGGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPTRYQL*FSQASR
Trigger: CCTGGAGGCCTGCGAGAACAAGAGCTGGTACCGCGT...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCACTGGTGTGGTGCTaGACGCGGTACCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTPLVWC*TRYQLL
Trigger: CAAGAGCTGGTACCGCGTCAAGCACCACACCAGTGG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGCCACTGGTGTGGTGCTaGACGCGGTACCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLPLVWC*TRYQLL
Trigger: CAAGAGCTGGTACCGCGTCAAGCACCACACCAGTGG...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCTCCTCCTCGGCCGACTaGGTCCCGTGTTTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPSSSAD*VPCFRF
Trigger: AAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGA...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCTCCTCCTCGGCCGACTaGGTCCCGTGTTTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSASSSAD*VPCFRF
Trigger: AAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGA...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTG +
Preference number: 5 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSALHGHL*PQVLTL
Trigger: CAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAG...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTG +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGLHGHL*PQVLTL
Trigger: CAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACCAGGTTCTCGTGTaGCATCTTCGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLHQVLV*HLRHDG
Trigger: GCCGTCATGACGAAGATGCAACACGAGAACCTGGTG...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCACCAGGTTCTCGTGTaGCATCTTCGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTHQVLV*HLRHDG
Trigger: GCCGTCATGACGAAGATGCAACACGAGAACCTGGTG...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA +
Preference number: 5 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLFTRLP*LTCSMT
Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTFTRLP*LTCSMT
Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCAGAAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LARLDPPWAWSVPPRRTLRKFTR*PLLTCS
Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTCT...GAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCGTGAACTTCCCGTGTTaGAGAGCCTCGGGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPVNFPC*RASGAV
Trigger: GACGGCGCCCGAGGCTCTCAAACACGGGAAGTTCAC...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CAA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGCACCAGGAGGATGACTaGCCCGCCTGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQHQEDD*PAWTLL
Trigger: AAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCCTCCGTTTCCTCATTTaGGGGGCGAAGAAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLLRFLI*GAKKGR
Trigger: CCGACCCTTCTTCGCCCCCAAAATGAGGAAACGGAG...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTCCCGGCTGCACAACTaGGAGCGAGTTGCTCCGTTT +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGSRLHN*ERVAPF
Trigger: AAACGGAGCAACTCGCTCCAAGTTGTGCAGCCGGGA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCCCACTGGTGTGGTGCTaGACGCGGTACCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPPLVWC*TRYQLL
Trigger: CAAGAGCTGGTACCGCGTCAAGCACCACACCAGTGG...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCTCCCGTGTTTCCGCTTaGGTCTCACCAGCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSASRVSA*VSPAWC
Trigger: GCACCAAGCTGGTGAGACCAAAGCGGAAACACGGGA...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGTCCCGTGTTTCCGCTTaGGTCTCACCAGCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGSRVSA*VSPAWC
Trigger: GCACCAAGCTGGTGAGACCAAAGCGGAAACACGGGA...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACACCAGGTTCTCGTGTaGCATCTTCGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAAHQVLV*HLRHDG
Trigger: GCCGTCATGACGAAGATGCAACACGAGAACCTGGTG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA +
Preference number: 5 (lower is better)
Translates to: APAVGTRRMTCPPGPSLGFTRLP*LTCSMT
Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...GCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGAGAAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: RMTCPPGPSLGLVSAPTPRKFTR*PLLTCS
Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTCT...CGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCCAGACATCCGACTaGCTGGTGAACTTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: DDLPAWTLLGPGQCPHAALQTSD*LVNFPC
Trigger: ACACGGGAAGTTCACCAGCAAGTCGGATGTCTGGAG...TGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS GCA 90 bp TCAGTAACCAGCCCGCAGGTCTTGGGAACCTGGCCAAGGAGGGAATaGTGGAGGATGGGGTGGGTGGAGGTTCGGGGCCAGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SVTSPQVLGTWPRRE*WRMGWVEVRGQVSG
Trigger: GCCAGAAACCTGGCCCCGAACCTCCACCCACCCCATCCTCCAGCATTCCCTCCTTGGCCAGGTTCCCAAGACCTGCGGGCTGGTTACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS-3UTR CAA 90 bp CGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTACCATGTCCATGAGGTaGCAGAAGAACACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RLDPPWAWSVPPRRTLHSTMSMR*QKNTAS
Trigger: TGAGGCCGTGTTCTTCTGCAACCTCATGGACATGGT...AGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCCCTCCCGTGTTTCCGCTTaGGTCTCACCAGCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: PSLSGDHPSQVWGVHGPPSRVSA*VSPAWC
Trigger: GCACCAAGCTGGTGAGACCAAAGCGGAAACACGGGA...GGGCGGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACCAGGTTCTCGTGTaGCATCTTCGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPHQVLV*HLRHDG
Trigger: GCCGTCATGACGAAGATGCAACACGAGAACCTGGTG...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCACCAGGTTCTCGTGTaGCATCTTCGTCATGACGGC +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGHQVLV*HLRHDG
Trigger: GCCGTCATGACGAAGATGCAACACGAGAACCTGGTG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGAGAAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLRKFTR*PLLTCS
Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTCT...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCCCTTCCGCTCGGCTTaGGCCAGGCCAAAGTCGCTG +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAPFRSA*ARPKSL
Trigger: CAGCGACTTTGGCCTGGCCAAAGCCGAGCGGAAGGG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CCAGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGCTCCAGACATCCGACTaGCTGGTGAACTTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: PAPAVGTRRMTCPPGPSLLQTSD*LVNFPC
Trigger: ACACGGGAAGTTCACCAGCAAGTCGGATGTCTGGAG...CAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CAA 90 bp AGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCTCCAGACATCCGACTaGCTGGTGAACTTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: RRMTCPPGPSLGLVSAPTLQTSD*LVNFPC
Trigger: ACACGGGAAGTTCACCAGCAAGTCGGATGTCTGGAG...CGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCTCCAGACATCCGACTaGCTGGTGAACCCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGLQTSD*LVNPCL
Trigger: CAAACACGGGTTCACCAGCAAGTCGGATGTCTGGAG...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585778.5
CDS-3UTR CAA 90 bp CCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTACAACTTGGAGCGAGTaGCTCCGTTTCCTCATTTTG +
Preference number: 5 (lower is better)
Translates to: PAWTLLGPGQCPHAALSTTTWSE*LRFLIL
Trigger: CAAAATGAGGAAACGGAGCAACTCGCTCCAAGTTGT...AGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS-3UTR CAA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCACCATGTCCATGAGGTaGCAGAAGAACACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPTMSMR*QKNTAS
Trigger: TGAGGCCGTGTTCTTCTGCAACCTCATGGACATGGT...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACACCATGTCCATGAGGTaGCAGAAGAACACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: QEDDLPAWTLLGPGQCPHTMSMR*QKNTAS
Trigger: TGAGGCCGTGTTCTTCTGCAACCTCATGGACATGGT...GTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp ATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACGCTGTCACATCACACTaGATATTCTTCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: MTCPPGPSLGLVSAPTPHAVTSH*IFFTAT
Trigger: GGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGC...GTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp TGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGAGAAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: CGHQEDDLPAWTLLGPGQRKFTR*PLLTCS
Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTCT...CTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGTGAACTTCCCGTGTTaGAGAGCCTCGGGCGCCGTC +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAVNFPC*RASGAV
Trigger: GACGGCGCCCGAGGCTCTCAAACACGGGAAGTTCAC...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS GCA 90 bp GCTCCAAACTCTCCCTCTCCGATCTGTGCTCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCCGCCCTGGCCAGCTCCTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: APNSPSPICAPNVKC*RFSNQPALASSSSA
Trigger: GGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGTTACTGAACCTGCAGCATTTGACATTGGGAGCACAGATCGGAGAGGGAGAGTTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590493.5
ENST00000619596.4
CDS CCA 90 bp CGCTGTCTGCCCGGCCATTCTCGATTCCTTGAACGAAGGGCCTCTTaGGGCGAGCTGCTTTGGGCGTCTTTGCTGGAAAACCCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: RCLPGHSRFLERRAS*GELLWASLLENPCP
Trigger: GGGGCAAGGGTTTTCCAGCAAAGACGCCCAAAGCAGCTCGCCCCAAGAGGCCCTTCGTTCAAGGAATCGAGAATGGCCGGGCAGACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592612.1
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCCACTGGTGTGGTGCTaGACGCGGTACCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAPLVWC*TRYQLL
Trigger: CAAGAGCTGGTACCGCGTCAAGCACCACACCAGTGG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCGCTGTCACATCACACTaGATATTCTTCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: GTRRMTCPPGPSLGLVSAAVTSH*IFFTAT
Trigger: GGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGC...GGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGCCTGGTCAGTGCCCCGCTGTCACATCACACTaGATATTCTTCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: HQEDDLPAWTLLGPGQCPAVTSH*IFFTAT
Trigger: GGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGC...GGGGCACTGACCAGGCCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp CTGGACCCTCCTTGGGCCTGGTCAGTGCCCCCACGCCGCACTCTCCACTCTCTCGCTGTCACATCACACTaGATATTCTTCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: LDPPWAWSVPPRRTLHSLAVTSH*IFFTAT
Trigger: GGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGC...GAGAGAGTGGAGAGTGCGGCGTGGGGGCACTGACCAGGCCCAAGGAGGGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS TCA 90 bp GCCACTGGACCGAGCCTGGTTCTTCCTGTTTTCAGAAGCTGCTGCTaGCCACGGGTCCCTCGCCGAGGTCTGCCTTCTCTTCGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: ATGPSLVLPVFRSCC*PRVPRRGLPSLRSA
Trigger: TGCTGAACGAAGAGAAGGCAGACCTCGGCGAGGGACCCGTGGTCAGCAGCAGCTTCTGAAAACAGGAAGAACCAGGCTCGGTCCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590980.1
CDS-3UTR CAA 90 bp AGCCCCTGCTGTGGGCACCAGGAGGATGACTTGCCCGCCTGGACCCTCCTTGGGACAACTTGGAGCGAGTaGCTCCGTTTCCTCATTTTG +
Preference number: 5 (lower is better)
Translates to: SPCCGHQEDDLPAWTLLGTTWSE*LRFLIL
Trigger: CAAAATGAGGAAACGGAGCAACTCGCTCCAAGTTGT...CCCAAGGAGGGTCCAGGCGGGCAAGTCATCCTCCTGGTGCCCACAGCAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS GCA 90 bp GCCTCTTGGGGCGAGCTGCTTTGGGCGTCTTTGCTGGAAAACCCTTaGCCCGTCTTCCTCGTCCTTAAGACGCAGCCGGACAGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: ASWGELLWASLLENP*PVFLVLKTQPDRLF
Trigger: AAACAACCTGTCCGGCTGCGTCTTAAGGACGAGGAAGACGGGGCAAGGGTTTTCCAGCAAAGACGCCCAAAGCAGCTCGCCCCAAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592612.1
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCTTCACCAGGTTGCCCTaGCTCACGTGCTCCATGACA +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAFTRLP*LTCSMT
Trigger: TGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAA...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCAGAAAGTTCACCAGGTaGCCCTTGCTCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRARKFTR*PLLTCS
Trigger: GGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTCT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCCTCCAGACATCCGACTaGCTGGTGAACTTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRALQTSD*LVNFPC
Trigger: ACACGGGAAGTTCACCAGCAAGTCGGATGTCTGGAG...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000619596.4
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCACCATGTCCATGAGGTaGCAGAAGAACACGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRATMSMR*QKNTAS
Trigger: TGAGGCCGTGTTCTTCTGCAACCTCATGGACATGGT...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS GCA 90 bp GCTCCAAACTCTCCCTCTCCGATCTGTGCTCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCCGCAGGTCTTGGGAACCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: APNSPSPICAPNVKC*RFSNQPAGLGNLAK
Trigger: CTTGGCCAGGTTCCCAAGACCTGCGGGCTGGTTACTGAACCTGCAGCATTTGACATTGGGAGCACAGATCGGAGAGGGAGAGTTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS-3UTR CAA 90 bp GAATCCGTCTTTATCGGGCGATCATCCTTCGCAGGTCTGGGGTGTCCACGGGCCGCTGTCACATCACACTaGATATTCTTCACGGCCACC +
Preference number: 5 (lower is better)
Translates to: ESVFIGRSSFAGLGCPRAAVTSH*IFFTAT
Trigger: GGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGC...GGCCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS GCA 90 bp GCCTGGGCTGTCACATCACACTTGATATTCTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGCAGGACAGCTCCAAACTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: AWAVTSHLIFFTATF*PRYSPCRTAPNSPS
Trigger: AGAGGGAGAGTTTGGAGCTGTCCTGCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4
CDS GCA 90 bp CTCGTCCTTAAGACGCAGCCGGACAGGTTGTTTTCCAGCCACACTTaGAGGTTTCATCCGTGGAAACTGGGTCTGTGTCACATCCGGCCT +
Preference number: 5 (lower is better)
Translates to: LVLKTQPDRLFSSHT*RFHPWKLGLCHIRP
Trigger: AGGCCGGATGTGACACAGACCCAGTTTCCACGGATGAAACCTGCAAGTGTGGCTGGAAAACAACCTGTCCGGCTGCGTCTTAAGGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS CCA 90 bp ACAGGTTGTTTTCCAGCCACACTTGCAGGTTTCATCCGTGGAAACTaGGTCTGTGTCACATCCGGCCTTAAAAGCTTCCCGGCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: TGCFPATLAGFIRGN*VCVTSGLKSFPAGR
Trigger: ACGCCCAGCCGGGAAGCTTTTAAGGCCGGATGTGACACAGACCCAGTTTCCACGGATGAAACCTGCAAGTGTGGCTGGAAAACAACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS GCA 72 bp CCGCGCCCGCCCCCAGGAGGGCCTCCGCGAGCCGGCTaGACACCCCGAGGCGGTCCCGGCTGCACAACTTGG +
Preference number: 6 (lower is better)
Translates to: PRPPPGGPPRAG*TPRGGPGCTTW
Trigger: CCAAGTTGTGCAGCCGGGACCGCCTCGGGGTGTGCAGCCGGCTCGCGGAGGCCCTCCTGGGGGCGGGCGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000585778.5
CDS CCA 72 bp CCCGGCACACACACAGCCGCCCCACACTGGAACACCTaGGCGCCAGCGCCGGGCCACTCGGGCACGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGTHTAAPHWNT*APAPGHSGTQG
Trigger: GCCCTGCGTGCCCGAGTGGCCCGGCGCTGGCGCCCAGGTGTTCCAGTGTGGGGCGGCTGTGTGTGTGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CCA 72 bp CCGGGTGGGGTCAGGGCTCCTGGCTTCGGGGCGAGGTaGAGCCGTCGGCGTCCTGCCCTGAGACGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PGGVRAPGFGAR*SRRRPALRRRL
Trigger: CAGCCTCCGTCTCAGGGCAGGACGCCGACGGCTCCACCTCGCCCCGAAGCCAGGAGCCCTGACCCCACCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000619596.4
CDS CAA 90 bp CACCCGCCGGCCTGCTCCGGGAACCGCGGCCTGGTGGGACGAGGGTaGCGGAGGACGGGTCAGGAGCGACCGCGTTTCAGGCCCGTGGAC +
Preference number: 6 (lower is better)
Translates to: HPPACSGNRGLVGRG*RRTGQERPRFRPVD
Trigger: GTCCACGGGCCTGAAACGCGGTCGCTCCTGACCCGTCCTCCGCAACCCTCGTCCCACCAGGCCGCGGTTCCCGGAGCAGGCCGGCGGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395045.6
ENST00000590821.1
ENST00000590849.1
ENST00000592300.1
ENST00000592612.1
CDS CCA 72 bp ACACGCTTTTCGGCCACACGCGCACAGCCCTCCACGTaGACGCGCGGGTACACACGCCCGGGGCTCGTAGCC +
Preference number: 6 (lower is better)
Translates to: TRFSATRAQPST*TRGYTRPGLVA
Trigger: GGCTACGAGCCCCGGGCGTGTGTACCCGCGCGTCCACGTGGAGGGCTGTGCGCGTGTGGCCGAAAAGCGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CCA 72 bp GGCTTGGGGCGGGTGTGCTCGCATTTGGTGATACACTaGGTGCCCGGGGCCCAGCGCCTCGTTGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: GLGRVCSHLVIH*VPGAQRLVGIL
Trigger: CAGGATGCCAACGAGGCGCTGGGCCCCGGGCACCCAGTGTATCACCAAATGCGAGCACACCCGCCCCAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS CCA 72 bp GGAGGACGGGTCAGGAGCGACCGCGTTTCAGGCCCGTaGACTCCGCAGCCCAGACGGTCCATCCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: GGRVRSDRVSGP*TPQPRRSIHLH
Trigger: GTGCAGATGGATGGACCGTCTGGGCTGCGGAGTCCACGGGCCTGAAACGCGGTCGCTCCTGACCCGTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395045.6
ENST00000590821.1
ENST00000590849.1
ENST00000592300.1
ENST00000592612.1
CDS CCA 72 bp CAGGAGGTAGGGAGCTGGGTGCCACTGGACCGAGCCTaGTTCTTCCTGTTTTCCGCTGCGCGCCCGGGACGC +
Preference number: 6 (lower is better)
Translates to: QEVGSWVPLDRA*FFLFSAARPGR
Trigger: GCGTCCCGGGCGCGCAGCGGAAAACAGGAAGAACCAGGCTCGGTCCAGTGGCACCCAGCTCCCTACCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590028.5
CDS CAA 72 bp GAGATCTTCCCGTGGAACCACGGCATGAGGCTGAGCTaGGGGTCTGCGGAGAGGGCCTCCCGCTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: EIFPWNHGMRLS*GSAERASRSRS
Trigger: GCTGCGGGAGCGGGAGGCCCTCTCCGCAGACCCCAAGCTCAGCCTCATGCCGTGGTTCCACGGGAAGATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000619596.4
CDS CAA 72 bp GCTCCGGGAACCGCGGCCTGGTGGCAGGAATCCTGTTaGCCTTCCCCGGGAGCCAGGGATGGGAACGGGAAC +
Preference number: 6 (lower is better)
Translates to: APGTAAWWQESC*PSPGARDGNGN
Trigger: GTTCCCGTTCCCATCCCTGGCTCCCGGGGAAGGCAAACAGGATTCCTGCCACCAGGCCGCGGTTCCCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590980.1
CDS CAA 90 bp AGGATGGTGACCACGTCGCCCTTGCGGAAGGCCAGCTCCCCTGGCTaGGGGCGGGTGTGCTCGCATTTGGTGATACACTGGGTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RMVTTSPLRKASSPG*GRVCSHLVIHWVPG
Trigger: CCCGGGCACCCAGTGTATCACCAAATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCACCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS CAA 90 bp CAGCTCTTGTTCTCGCAGGCCTCCAGGATGGTGACCACGTCGCCCTaGCGGAAGGCCAGCTCCCCTGGCTTGGGGCGGGTGTGCTCGCAT +
Preference number: 6 (lower is better)
Translates to: QLLFSQASRMVTTSP*RKASSPGLGRVCSH
Trigger: ATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCTGCGAGAACAAGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS TCA 72 bp GCTCGGAGGAAGCGGGGGCTCACCAGAAGCTGCTGCTaGCCACGGGTCCCTCGCCGAGGTCTGCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: ARRKRGLTRSCC*PRVPRRGLPSL
Trigger: AAGAGAAGGCAGACCTCGGCGAGGGACCCGTGGTCAGCAGCAGCTTCTGGTGAGCCCCCGCTTCCTCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395045.6
ENST00000619596.4
CDS GCA 72 bp CTCCGGGAACCGCGGCCTGGTGGCAGGAATCCTGTTTaGCTTCCCCGGGAGCCAGGGATGGGAACGGGAACT +
Preference number: 6 (lower is better)
Translates to: LREPRPGGRNPV*LPREPGMGTGT
Trigger: AGTTCCCGTTCCCATCCCTGGCTCCCGGGGAAGGCAAACAGGATTCCTGCCACCAGGCCGCGGTTCCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590980.1
CDS CCA 72 bp ACCAGCCCGCCCTGGCCAGCTCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTGGTCTCACCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: TSPPWPAPPRPT*SRVSALVSPAW
Trigger: CCAAGCTGGTGAGACCAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGAGCTGGCCAGGGCGGGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590493.5
ENST00000619596.4
CDS CCA 72 bp GCTGGGGACCCCTGGCCAGCTCCTCCTCGGCCGACTTaGTCCCGTGTTTCCGCTTTGGTCTCACCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: AGDPWPAPPRPT*SRVSALVSPAW
Trigger: CCAAGCTGGTGAGACCAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGAGCTGGCCAGGGGTCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS CCA 72 bp GGGCATAAGGAAGGAAGCGGGGCTGCAGGTACCGCCTaGGGTTCACAGCAGGGGACGAGGTGCCTCCCACCA +
Preference number: 6 (lower is better)
Translates to: GHKEGSGAAGTA*GSQQGTRCLPP
Trigger: TGGTGGGAGGCACCTCGTCCCCTGCTGTGAACCCCAGGCGGTACCTGCAGCCCCGCTTCCTTCCTTATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590980.1
CDS TCA 72 bp GGTACCAGCTCTTGTTCTCGCAGGCCTCCAGGATGGTaGCCACGTCGCCCTTGCGGAAGGCCAGCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: GTSSCSRRPPGW*PRRPCGRPAPL
Trigger: CAGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCACCATCCTGGAGGCCTGCGAGAACAAGAGCTGGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS GCA 72 bp GACAAGCAAAGGACCACGTCCACGTGGAAACAGGTGTaGGCACACGTCCCCGCGCATCCGCGCGCACAAGCG +
Preference number: 6 (lower is better)
Translates to: DKQRTTSTWKQV*AHVPAHPRAQA
Trigger: CGCTTGTGCGCGCGGATGCGCGGGGACGTGTGCGCACACCTGTTTCCACGTGGACGTGGTCCTTTGCTTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CCA 72 bp GGTGACCACGTCGCCCTTGCGGAAGGCCAGCTCCCCTaGCTTGGGGCGGGTGTGCTCGCATTTGGTGATACA +
Preference number: 6 (lower is better)
Translates to: GDHVALAEGQLP*LGAGVLAFGDT
Trigger: TGTATCACCAAATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGTCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS CCA 72 bp CAGCTGCGCGCAGACAAGCAAAGGACCACGTCCACGTaGAAACAGGTGTGCGCACACGTCCCCGCGCATCCG +
Preference number: 6 (lower is better)
Translates to: QLRADKQRTTST*KQVCAHVPAHP
Trigger: CGGATGCGCGGGGACGTGTGCGCACACCTGTTTCCACGTGGACGTGGTCCTTTGCTTGTCTGCGCGCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CAA 72 bp ACCACGTCGCCCTTGCGGAAGGCCAGCTCCCCTGGCTaGGGGCGGGTGTGCTCGCATTTGGTGATACACTGG +
Preference number: 6 (lower is better)
Translates to: TTSPLRKASSPG*GRVCSHLVIHW
Trigger: CCAGTGTATCACCAAATGCGAGCACACCCGCCCCAAGCCAGGGGAGCTGGCCTTCCGCAAGGGCGACGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS CAA 72 bp AGCTGGGGACCCCTGGCCAGCTCCTCCTCGGCCGACTaGGTCCCGTGTTTCCGCTTTGGTCTCACCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SWGPLASSSSAD*VPCFRFGLTSL
Trigger: CAAGCTGGTGAGACCAAAGCGGAAACACGGGACCAAGTCGGCCGAGGAGGAGCTGGCCAGGGGTCCCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS TCA 72 bp CTGCCAGCAGCCCCTCCTGTCCACTGGTGTGGTGCTTaGCGCGGTACCAGCTCTTGTTCTCGCAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LPAAPPVHWCGA*RGTSSCSRRPP
Trigger: TGGAGGCCTGCGAGAACAAGAGCTGGTACCGCGTCAAGCACCACACCAGTGGACAGGAGGGGCTGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590028.5
ENST00000590849.1
ENST00000619596.4
CDS TCA 72 bp CTCACCCGGGGAAGTTCCTCAGCAGAATCACAGCCGTaGAATGCCCGCCAGGAAACCAGAGAGCCTCGCCCC +
Preference number: 6 (lower is better)
Translates to: LTRGSSSAESQP*NARQETREPRP
Trigger: GGGGCGAGGCTCTCTGGTTTCCTGGCGGGCATTTCACGGCTGTGATTCTGCTGAGGAACTTCCCCGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310132.11
ENST00000585778.5
ENST00000590028.5
CDS GCA 72 bp CCCGAGGCGGTCCCGGCTGCACAACTTGGAGCGAGTTaGTCCGTTTCCTCATTTTGGGGGCGAAGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: PEAVPAAQLGAS*SVSSFWGRRRV
Trigger: GACCCTTCTTCGCCCCCAAAATGAGGAAACGGAGCAACTCGCTCCAAGTTGTGCAGCCGGGACCGCCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310132.11
ENST00000395040.6
CDS GCA 72 bp CCGGGGAAGTTCCTCAGCAGAATCACAGCCGTGAAATaGCCGCCAGGAAACCAGAGAGCCTCGCCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: PGKFLSRITAVK*PPGNQRASPRH
Trigger: ATGGCGGGGCGAGGCTCTCTGGTTTCCTGGCGGGCATTTCACGGCTGTGATTCTGCTGAGGAACTTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310132.11
ENST00000585778.5
ENST00000590028.5
CDS CCA 72 bp GGGAAACTGAGGCAGGTGAGAGGCACACTGAGCAAGTaGTCACAGTCGGGGACGCTGGGAATGGCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: GKLRQVRGTLSK*SQSGTLGMACH
Trigger: GTGGCAGGCCATTCCCAGCGTCCCCGACTGTGACCACTTGCTCAGTGTGCCTCTCACCTGCCTCAGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310132.11
ENST00000585778.5
ENST00000590028.5
ENST00000591059.1
CDS CCA 72 bp GCAGGTTCAGTAACCAGCCCGCAGGTCTTGGGAACCTaGCCAAGGAGGGAATGCTGGAGGATGGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AGSVTSPQVLGT*PRRECWRMGWV
Trigger: CACCCACCCCATCCTCCAGCATTCCCTCCTTGGCCAGGTTCCCAAGACCTGCGGGCTGGTTACTGAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS TCA 72 bp AACCAGTCGCTGTCTGCCCGGCCATTCTCGATTCCTTaGACGAAGGGCCTCTTGGGGCGAGCTGCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: NQSLSARPFSIP*TKGLLGRAALG
Trigger: GCCCAAAGCAGCTCGCCCCAAGAGGCCCTTCGTTCAAGGAATCGAGAATGGCCGGGCAGACAGCGACTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592612.1
CDS GCA 72 bp GAAGCTGCTGCTGACCACGGGTCCCTCGCCGAGGTCTaGCTTCTCTTCGTTCAGCAGGGAAATGTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: EAAADHGSLAEV*LLFVQQGNVPA
Trigger: TGCAGGGACATTTCCCTGCTGAACGAAGAGAAGGCAGACCTCGGCGAGGGACCCGTGGTCAGCAGCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395045.6
ENST00000590821.1
ENST00000590980.1
ENST00000619596.4
CDS GCA 72 bp GGCGAGCTGCTTTGGGCGTCTTTGCTGGAAAACCCTTaGCCCGTCTTCCTCGTCCTTAAGACGCAGCCGGAC +
Preference number: 6 (lower is better)
Translates to: GELLWASLLENP*PVFLVLKTQPD
Trigger: GTCCGGCTGCGTCTTAAGGACGAGGAAGACGGGGCAAGGGTTTTCCAGCAAAGACGCCCAAAGCAGCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS GCA 72 bp GCACACGCACAGAAACACACAGGGCTCGGACACAGCTaGGCGCAGACAAGCAAAGGACCACGTCCACGTGGA +
Preference number: 6 (lower is better)
Translates to: AHAQKHTGLGHS*AQTSKGPRPRG
Trigger: TCCACGTGGACGTGGTCCTTTGCTTGTCTGCGCGCAGCTGTGTCCGAGCCCTGTGTGTTTCTGTGCGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CCA 72 bp TTCTGGCTCAGATGGTGGATGATGGTGACAGATGAGTaGCGAAGCTGGGGACCCCTGGCCAGCTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: FWLRWWMMVTDE*RSWGPLASSSS
Trigger: CGAGGAGGAGCTGGCCAGGGGTCCCCAGCTTCGCCACTCATCTGTCACCATCATCCACCATCTGAGCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS CAA 72 bp CAACCAGTCGCTGTCTGCCCGGCCATTCTCGATTCCTaGAACGAAGGGCCTCTTGGGGCGAGCTGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: QPVAVCPAILDS*NEGPLGASCFG
Trigger: CCCAAAGCAGCTCGCCCCAAGAGGCCCTTCGTTCAAGGAATCGAGAATGGCCGGGCAGACAGCGACTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592612.1
CDS TCA 72 bp CCGAGCCTGGTTCTTCCTGTTTTCAGAAGCTGCTGCTaGCCACGGGTCCCTCGCCGAGGTCTGCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: PSLVLPVFRSCC*PRVPRRGLPSL
Trigger: AAGAGAAGGCAGACCTCGGCGAGGGACCCGTGGTCAGCAGCAGCTTCTGAAAACAGGAAGAACCAGGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590980.1
CDS GCA 72 bp TCTCCCTCTCCGATCTGTGCTCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCCGCCCTGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SPSPICAPNVKC*RFSNQPALASS
Trigger: GGAGCTGGCCAGGGCGGGCTGGTTACTGAACCTGCAGCATTTGACATTGGGAGCACAGATCGGAGAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000587180.1
ENST00000590493.5
ENST00000619596.4
CDS CCA 72 bp GGTGGAGGTTCGGGGCCAGGTTTCTGGCTCAGATGGTaGATGATGGTGACAGATGAGTGGCGAAGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: GGGSGPGFWLRW*MMVTDEWRSWG
Trigger: TCCCCAGCTTCGCCACTCATCTGTCACCATCATCCACCATCTGAGCCAGAAACCTGGCCCCGAACCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS CCA 72 bp GTGGGTGGAGGTTCGGGGCCAGGTTTCTGGCTCAGATaGTGGATGATGGTGACAGATGAGTGGCGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VGGGSGPGFWLR*WMMVTDEWRSW
Trigger: CCAGCTTCGCCACTCATCTGTCACCATCATCCACCATCTGAGCCAGAAACCTGGCCCCGAACCTCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS CCA 72 bp GAGGATGGGGTGGGTGGAGGTTCGGGGCCAGGTTTCTaGCTCAGATGGTGGATGATGGTGACAGATGAGTGG +
Preference number: 6 (lower is better)
Translates to: EDGVGGGSGPGF*LRWWMMVTDEW
Trigger: CCACTCATCTGTCACCATCATCCACCATCTGAGCCAGAAACCTGGCCCCGAACCTCCACCCACCCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS CAA 90 bp ATGACGGCCGTCTCGTCCAGGAAGGCCTGGGCTGTCACATCACACTaGATATTCTTCACGGCCACCTTTTGCCCCAGGTACTCACCCTGC +
Preference number: 6 (lower is better)
Translates to: MTAVSSRKAWAVTSH*IFFTATFCPRYSPC
Trigger: GCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGCCCAGGCCTTCCTGGACGAGACGGCCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4
CDS CCA 72 bp CAGGAGGTAGGGAGCTGGGTGCCACTGGACCGAGCCTaGTTCTTCCTGTTTTACGCATACGGATGCATGCAC +
Preference number: 6 (lower is better)
Translates to: QEVGSWVPLDRA*FFLFYAYGCMH
Trigger: GTGCATGCATCCGTATGCGTAAAACAGGAAGAACCAGGCTCGGTCCAGTGGCACCCAGCTCCCTACCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591059.1
CDS CAA 90 bp GGCCTGGGCTGTCACATCACACTTGATATTCTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTGCAGGACAGCTCCAAACTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: GLGCHITLDILHGHL*PQVLTLQDSSKLSL
Trigger: GAGGGAGAGTTTGGAGCTGTCCTGCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4
CDS TCA 72 bp GAAAGTTCACCAGGTTGCCCTTGCTCACGTGCTCCATaGCAATGTACAGCCCCTGGTGCAGGATCACGCCCA +
Preference number: 6 (lower is better)
Translates to: ESSPGCPCSRAP*QCTAPGAGSRP
Trigger: TGGGCGTGATCCTGCACCAGGGGCTGTACATTGTCATGGAGCACGTGAGCAAGGGCAACCTGGTGAACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4
CDS CAA 72 bp CCCGTCTTCCTCGTCCTTAAGACGCAGCCGGACAGGTaGTTTTCCAGCCACACTTGCAGGTTTCATCCGTGG +
Preference number: 6 (lower is better)
Translates to: PVFLVLKTQPDR*FSSHTCRFHPW
Trigger: CCACGGATGAAACCTGCAAGTGTGGCTGGAAAACAACCTGTCCGGCTGCGTCTTAAGGACGAGGAAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS CAA 90 bp AACCCTTGCCCCGTCTTCCTCGTCCTTAAGACGCAGCCGGACAGGTaGTTTTCCAGCCACACTTGCAGGTTTCATCCGTGGAAACTGGGT +
Preference number: 6 (lower is better)
Translates to: NPCPVFLVLKTQPDR*FSSHTCRFHPWKLG
Trigger: ACCCAGTTTCCACGGATGAAACCTGCAAGTGTGGCTGGAAAACAACCTGTCCGGCTGCGTCTTAAGGACGAGGAAGACGGGGCAAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS GCA 72 bp TCTCCCTCTCCGATCTGTGCTCCCAATGTCAAATGCTaGAGGTTCAGTAACCAGCCCGCAGGTCTTGGGAAC +
Preference number: 6 (lower is better)
Translates to: SPSPICAPNVKC*RFSNQPAGLGN
Trigger: GTTCCCAAGACCTGCGGGCTGGTTACTGAACCTGCAGCATTTGACATTGGGAGCACAGATCGGAGAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS GCA 72 bp AACTCTCCCTCTCCGATCTGTGCTCCCAATGTCAAATaGTGCAGGTTCAGTAACCAGCCCGCAGGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: NSPSPICAPNVK*CRFSNQPAGLG
Trigger: CCCAAGACCTGCGGGCTGGTTACTGAACCTGCAGCATTTGACATTGGGAGCACAGATCGGAGAGGGAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588983.5
CDS TCA 72 bp TCTCGTCCAGGAAGGCCTGGGCTGTCACATCACACTTaGTATTCTTCACGGCCACCTTTTGCCCCAGGTACT +
Preference number: 6 (lower is better)
Translates to: SRPGRPGLSHHT*YSSRPPFAPGT
Trigger: AGTACCTGGGGCAAAAGGTGGCCGTGAAGAATATCAAGTGTGATGTGACAGCCCAGGCCTTCCTGGACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4
CDS GCA 72 bp AAGACGCAGCCGGACAGGTTGTTTTCCAGCCACACTTaGAGGTTTCATCCGTGGAAACTGGGTCTGTGTCAC +
Preference number: 6 (lower is better)
Translates to: KTQPDRLFSSHT*RFHPWKLGLCH
Trigger: GTGACACAGACCCAGTTTCCACGGATGAAACCTGCAAGTGTGGCTGGAAAACAACCTGTCCGGCTGCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS GCA 72 bp GTCACATCACACTTGATATTCTTCACGGCCACCTTTTaGCCCAGGTACTCACCCTGCAGGACAGCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: VTSHLIFFTATF*PRYSPCRTAPN
Trigger: GTTTGGAGCTGTCCTGCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAGAATATCAAGTGTGATGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4
CDS CCA 72 bp TTTCCAGCCACACTTGCAGGTTTCATCCGTGGAAACTaGGTCTGTGTCACATCCGGCCTTAAAAGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: FPATLAGFIRGN*VCVTSGLKSFP
Trigger: CGGGAAGCTTTTAAGGCCGGATGTGACACAGACCCAGTTTCCACGGATGAAACCTGCAAGTGTGGCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592300.1
ENST00000592612.1
CDS CAA 72 bp TGTCACATCACACTTGATATTCTTCACGGCCACCTTTaGCCCCAGGTACTCACCCTGCAGGACAGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: CHITLDILHGHL*PQVLTLQDSSK
Trigger: TTTGGAGCTGTCCTGCAGGGTGAGTACCTGGGGCAAAAGGTGGCCGTGAAGAATATCAAGTGTGATGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310132.11
ENST00000395040.6
ENST00000395045.6
ENST00000585778.5
ENST00000588983.5
ENST00000590493.5
ENST00000619596.4