RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAT2B (Homo sapiens)

Ensembl gene IDs: ENSG00000038274

Ensembl transcript IDs: ENST00000280969.9, ENST00000321757.11, ENST00000421814.6, ENST00000518095.5, ENST00000519719.1, ENST00000520449.1, ENST00000523606.1

Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGCAGTCAAGCTaGGCATTTCTCGGACGTTGTGCTCCTAGGACAGGGCTGTCAGTA +
Preference number: 1 (lower is better)
Translates to: VRWPMPKVSNLEQSS*AFLGRCAPRTGLSV
Trigger: TACTGACAGCCCTGTCCTAGGAGCACAACGTCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR CCA 90 bp CAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTaGAGCAGTCAAGCTGAGCATTTCTCGGACGTTGTGCTCCTAGGA +
Preference number: 1 (lower is better)
Translates to: QFEMVFVGQCPRSPI*SSQAEHFSDVVLLG
Trigger: TCCTAGGAGCACAACGTCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR TCA 90 bp AATGGATCTAAAGGTTTTTACAGCCATGTACTTACAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAGGCATCTGCAATTGCACATGCCATT +
Preference number: 1 (lower is better)
Translates to: NGSKGFYSHVLTGLK*LLGRLKASAIAHAI
Trigger: AATGGCATGTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGTCACTTAAGACCTGTAAGTACATGGCTGTAAAAACCTTTAGATCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR TCA 90 bp AAAGACCGTTTGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTaGTTCTTTGATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCC +
Preference number: 1 (lower is better)
Translates to: KDRLSPSLVNEERPK*FFDSNSKWCSLANA
Trigger: GGCATTGGCCAACGAACACCATTTCGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACAAACGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR TCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGACTGCTGGGGAGGTTaGAGGCATCTGCAATTGCAC +
Preference number: 2 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGDCWGG*RHLQLH
Trigger: GTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGTC...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR TCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAACTGCAAACAGGGCATaGCTGCCCTTTAGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGTANRA*LPFSFF
Trigger: AAAGAAACTAAAGGGCAGTCATGCCCTGTTTGCAGT...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR CAA 90 bp GTTTGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTaGATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: VCLHLLSMRKGQSDS*IPIRNGVRWPMPKV
Trigger: GACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR GCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAAGTCTACAGCAGATCTaGTTCATCCTGACTCTCAAA +
Preference number: 2 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGSLQQI*FILTLK
Trigger: TTTGAGAGTCAGGATGAAGCAGATCTGCTGTAGACT...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR GCA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTAGTGCTCCCCATAAACTaGTATAAAAGCAGGAGGCAT +
Preference number: 2 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLVLPIN*YKSRRH
Trigger: ATGCCTCCTGCTTTTATAGCAGTTTATGGGGAGCAC...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR GCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGAAGGCATCTGCAATTaGACATGCCATTTCATACTT +
Preference number: 2 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGEGICN*TCHFIL
Trigger: AAGTATGAAATGGCATGTGCAATTGCAGATGCCTTC...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR CCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGGCAACCCTCTTTTTCTaGAAAGGTCTCCACAAGATA +
Preference number: 2 (lower is better)
Translates to: SAIAHAISYLVICSLPDQATLFF*KGLHKI
Trigger: TATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGC...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR TCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGAGAGCATCATTTACCTaGAAGATCCTAAGAGTCACA +
Preference number: 2 (lower is better)
Translates to: SAIAHAISYLVICSLPDQRASFT*KILRVT
Trigger: TGTGACTCTTAGGATCTTTCAGGTAAATGATGCTCT...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCACTGCAAACAGGGCATaGCTGCCCTTTAGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFTANRA*LPFSFF
Trigger: AAAGAAACTAAAGGGCAGTCATGCCCTGTTTGCAGT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCAAACAGGGCATGACTaGCCTTTAGTTTCTTTAGAC +
Preference number: 2 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYQTGHD*PLVSLD
Trigger: GTCTAAAGAAACTAAAGGGCAGTCATGCCCTGTTTG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCAAACAGGGCATGACTaGCCTTTAGTTTCTTTAGAC +
Preference number: 2 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFQTGHD*PLVSLD
Trigger: GTCTAAAGAAACTAAAGGGCAGTCATGCCCTGTTTG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAGTCTACAGCAGATCTaGTTCATCCTGACTCTCAAA +
Preference number: 2 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSLQQI*FILTLK
Trigger: TTTGAGAGTCAGGATGAAGCAGATCTGCTGTAGACT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAGAGCATCATTTACCTaGAAGATCCTAAGAGTCACA +
Preference number: 2 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYRASFT*KILRVT
Trigger: TGTGACTCTTAGGATCTTTCAGGTAAATGATGCTCT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCAGCTTCAAAAATCCTaGAAATATGGAGGTTACGAG +
Preference number: 2 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYQLQKS*KYGGYE
Trigger: CTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCAACTTTTTCAAATGTaGTGGGATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYQLFQM*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACATTTGAAAAAGTTG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTGGAGGTTACGAGAATaGACAATTTCATCTGAAAAG +
Preference number: 2 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYWRLRE*TISSEK
Trigger: CTTTTCAGATGAAATTGTTCATTCTCGTAACCTCCA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCAAACATTTTGATCTaGGCTCAGGCAAAGCAAATA +
Preference number: 2 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSNILI*AQAKQI
Trigger: TATTTGCTTTGCCTGAGCTCAGATCAAAATGTTTGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR TCA 72 bp CCAATGCCCAAGGTCTCCAATTTGGAGCAGTCAAGCTaGGCATTTCTCGGACGTTGTGCTCCTAGGACAGGG +
Preference number: 3 (lower is better)
Translates to: PMPKVSNLEQSS*AFLGRCAPRTG
Trigger: CCCTGTCCTAGGAGCACAACGTCCGAGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGGGCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR GCA 72 bp ACTGCTGGGGAGGTTGAAGGCATCTGCAATTGCACATaGCATTTCATACTTAGTCATCTGTTCATTGCCAGA +
Preference number: 3 (lower is better)
Translates to: TAGEVEGICNCT*HFILSHLFIAR
Trigger: TCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR TCA 72 bp ATGTACTTACAGGTCTTAAGTGACTGCTGGGGAGGTTaGAGGCATCTGCAATTGCACATGCCATTTCATACT +
Preference number: 3 (lower is better)
Translates to: MYLQVLSDCWGG*RHLQLHMPFHT
Trigger: AGTATGAAATGGCATGTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGTCACTTAAGACCTGTAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR TCA 72 bp AAAGGTTTTTACAGCCATGTACTTACAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAGGCATCTGCAATTGCA +
Preference number: 3 (lower is better)
Translates to: KGFYSHVLTGLK*LLGRLKASAIA
Trigger: TGCAATTGCAGATGCCTTCAACCTCCCCAGCAGTCACTTAAGACCTGTAAGTACATGGCTGTAAAAACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR GCA 72 bp CATGTACACACGCTCTTTCAAGTGCTCCCCATAAACTaGTATAAAAGCAGGAGGCATCAAGCTGTAGAAGTT +
Preference number: 3 (lower is better)
Translates to: HVHTLFQVLPIN*YKSRRHQAVEV
Trigger: AACTTCTACAGCTTGATGCCTCCTGCTTTTATAGCAGTTTATGGGGAGCACTTGAAAGAGCGTGTGTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR TCA 72 bp TTGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTaGTTCTTTGATTCCAATTCGAAATGGTGTTCGTTG +
Preference number: 3 (lower is better)
Translates to: LSPSLVNEERPK*FFDSNSKWCSL
Trigger: CAACGAACACCATTTCGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
3UTR-3UTR CAA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTTTGTGCCTGGCCATTTaGAGGTTTTATATTTGCTAC +
Preference number: 3 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPILCLAI*RFYICY
Trigger: GTAGCAAATATAAAACCTCAAAATGGCCAGGCACAA...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp ATCAAACATAACAGTCACAGCACTTTCTTCGAGCTTTTCAACTTCCCCATACAGTCTCCCGCCCCACCATaGCCGCCGTCTTCACGCCGC +
Preference number: 4 (lower is better)
Translates to: IKHNSHSTFFELFNFPIQSPAPP*PPSSRR
Trigger: GCGGCGTGAAGACGGCGGGCATGGTGGGGCGGGAGA...CTGTATGGGGAAGTTGAAAAGCTCGAAGAAAGTGCTGTGACTGTTATGTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTCTCCCGCCCCACCATaGCCGCCGTCTTCACGCCGC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSPAPP*PPSSRR
Trigger: GCGGCGTGAAGACGGCGGGCATGGTGGGGCGGGAGA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCTCCCGCCCCACCATaGCCGCCGTCTTCACGCCGC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSPAPP*PPSSRR
Trigger: GCGGCGTGAAGACGGCGGGCATGGTGGGGCGGGAGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SAIAHAISYLVICSLPDQLFSAS*RHTVAT
Trigger: TGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAG...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGATTGGAGCAGTCAAGCTaGGCATTTCTCGGACGTTGT +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGLEQSS*AFLGRC
Trigger: ACAACGTCCGAGAAATGCTCAGCTTGACTGCTCCAA...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGACCAAGGTCTCCAATTTaGAGCAGTCAAGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGPRSPI*SSQAEH
Trigger: ATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGG...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTAAACCTCTGCTGCCAGTaGTCCATGTTTGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLNLCCQ*SMFADL
Trigger: CAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTT...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGAAACCACAGCCAACTaGATGCCAATTATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGETTAN*MPIILL
Trigger: CAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTC...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTAGAGGCAGCATCTGGCTaGTTTTCTACAACATCTGGT +
Preference number: 4 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLEAASG*FSTTSG
Trigger: ACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTC...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAAGAAAAGTAGCACTATaGACAGCCAGCATACAAGCA +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGRKVAL*TASIQA
Trigger: TGCTTGTATGCTGGCTGTTCATAGTGCTACTTTTCT...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp ACTTCCCCATACAGAATAGGAATCCTCAAAACAGCAGCTCCTAGATTGTTCTCCGAAACCACAGCCAACTaGATGCCAATTATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSPYRIGILKTAAPRLFSETTAN*MPIILL
Trigger: CAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTC...GGAGAACAATCTAGGAGCTGCTGTTTTGAGGATTCCTATTCTGTATGGGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFLFSAS*RHTVAT
Trigger: TGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLFSAS*RHTVAT
Trigger: TGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGACAAACAGGGCATGACTaGCCTTTAGTTTCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGQTGHD*PLVSLD
Trigger: GTCTAAAGAAACTAAAGGGCAGTCATGCCCTGTTTG...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGCAACCCTCTTTTTCTaGAAAGGTCTCCACAAGATA +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGATLFF*KGLHKI
Trigger: TATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGC...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAGGCACGCCAAAACGTaGGGAGCAGCTTCACTTGAC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYRHAKT*GAASLD
Trigger: GTCAAGTGAAGCTGCTCCTCACGTTTTGGCGTGCCT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGACTGCTGGGGAGGTTaGAGGCATCTGCAATTGCAC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFDCWGG*RHLQLH
Trigger: GTGCAATTGCAGATGCCTTCAACCTCCCCAGCAGTC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGTCTTTGTTCGCTTCTaGCTGCAGAGAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFVFVRF*LQRAQA
Trigger: TGCCTGCGCTCTCTGCAGGCAGAAGCGAACAAAGAC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR GCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAATCTGGTCTTCTCTCTaGTGCACAATGTACTATAAC +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGIWSSL*CTMYYN
Trigger: GTTATAGTACATTGTGCAGCAGAGAGAAGACCAGAT...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGGAGGTTGAAGGCATCTaGAATTGCACATGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SAIAHAISYLVICSLPDQEVEGI*NCTCHF
Trigger: GAAATGGCATGTGCAATTGCAGATGCCTTCAACCTC...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGIFYNI*SSLCCT
Trigger: TGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAAT...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTTTGGTCTTGCTCTTCTaGAACCACAGCCAACTGCAT +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPILVLLF*NHSQLH
Trigger: ATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAA...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp ACTTTATCAAACATAACAGTCACAGCACTTTCTTCGAGCTTTTCAACTTCCCCATTGGTCTTGCTCTTCTaGAACCACAGCCAACTGCAT +
Preference number: 4 (lower is better)
Translates to: TLSNITVTALSSSFSTSPLVLLF*NHSQLH
Trigger: ATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAA...TGGGGAAGTTGAAAAGCTCGAAGAAAGTGCTGTGACTGTTATGTTTGATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCAGTGGCCACATCTTTaGCATGTGTGGGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFQWPHL*HVWGTS
Trigger: AGAGGTTCCCCACACATGTCAAAGATGTGGCCACTG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCAGTGGCCACATCTTTaGCATGTGTGGGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYQWPHL*HVWGTS
Trigger: AGAGGTTCCCCACACATGTCAAAGATGTGGCCACTG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGGAGGAAAGGCCAAAGTaGTTCTTTGATTCCAATTCG +
Preference number: 4 (lower is better)
Translates to: SAIAHAISYLVICSLPDQEERPK*FFDSNS
Trigger: CGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTC...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTATCCATCTCTTGTCAATaGGGAAAGGCCAAAGTGATT +
Preference number: 4 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLSISCQ*GKAKVI
Trigger: AATCACTTTGGCCTTTCCTCATTGACAAGAGATGGA...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCTTTGTGTACAGCTCTaGCAAGAAGCCCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLCVQL*QEAQWH
Trigger: GTGCCACTGGGCTTCTTGGCAGAGCTGTACACAAAG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAGAGCAGATACGGGATaGGTCTTAGCCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFRADTG*VLASAF
Trigger: GAAGGCAGAGGCTAAGACCCATCCCGTATCTGCTCT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCTGCTCCATGTCCTCTaGCATTTCAGGCATGACTCC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLLHVL*HFRHDS
Trigger: GGAGTCATGCCTGAAATGCCAGAGGACATGGAGCAG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR CCA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTATTGAGAGGCAGCATCTaGCTGATTTTCTACAACATC +
Preference number: 4 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLLRGSI*LIFYNI
Trigger: GATGTTGTAGAAAATCAGCCAGATGCTGCCTCTCAA...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCGAAATGGTGTTCGTTaGCCAATGCCCAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYRNGVR*PMPKVS
Trigger: GGAGACCTTGGGCATTGGCCAACGAACACCATTTCG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCGAAATGGTGTTCGTTaGCCAATGCCCAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFRNGVR*PMPKVS
Trigger: GGAGACCTTGGGCATTGGCCAACGAACACCATTTCG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
3UTR CAA 72 bp CATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTaGATTCCAATTCGAAATGGTGTTCGTTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: HLLSMRKGQSDS*IPIRNGVRWPM
Trigger: CATTGGCCAACGAACACCATTTCGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAACCTCTGCTGCCAGTaGTCCATGTTTGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFNLCCQ*SMFADL
Trigger: CAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAACCTCTGCTGCCAGTaGTCCATGTTTGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYNLCCQ*SMFADL
Trigger: CAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTTGGAGCAGTCAAGCTaGGCATTTCTCGGACGTTGT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLEQSS*AFLGRC
Trigger: ACAACGTCCGAGAAATGCTCAGCTTGACTGCTCCAA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTTGGAGCAGTCAAGCTaGGCATTTCTCGGACGTTGT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFLEQSS*AFLGRC
Trigger: ACAACGTCCGAGAAATGCTCAGCTTGACTGCTCCAA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGGCCAAAGTGATTCTTTaGTTCCAATTCGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: SAIAHAISYLVICSLPDQAKVIL*FQFEMV
Trigger: CACCATTTCGAATTGGAATCAAAGAATCACTTTGGC...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGCAGCTTCAAAAATCCTaGAAATATGGAGGTTACGAG +
Preference number: 4 (lower is better)
Translates to: SAIAHAISYLVICSLPDQQLQKS*KYGGYE
Trigger: CTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTG...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTAAGCGGCAACATGGGATaGAAAGGACAGTTATATATT +
Preference number: 4 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLSGNMG*KGQLYI
Trigger: AATATATAACTGTCCTTTTCATCCCATGTTGCCGCT...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCTTACAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFLTGLK*LLGRLK
Trigger: CTTCAACCTCCCCAGCAGTCACTTAAGACCTGTAAG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAATCCCGGAATCTCGTaGAGTTCTCCACATGGCAGT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFNPGIS*SSPHGS
Trigger: ACTGCCATGTGGAGAACTGCACGAGATTCCGGGATT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCTGCCTTCTCTTGCTaGGTCTTTGTTCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSAFSC*VFVRFC
Trigger: GCAGAAGCGAACAAAGACCCAGCAAGAGAAGGCAGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR CCA 90 bp ACTTCCCCATACAGAATAGGAATCCTCAAAACAGCAGCTCCTAGATTGTTCTCCTTCCTCTCTGTAAGGTaGATTTGTTCCATCAAATAC +
Preference number: 4 (lower is better)
Translates to: TSPYRIGILKTAAPRLFSFLSVR*ICSIKY
Trigger: GTATTTGATGGAACAAATCCACCTTACAGAGAGGAA...GGAGAACAATCTAGGAGCTGCTGTTTTGAGGATTCCTATTCTGTATGGGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTTGGTCTTGCTCTTCTaGAACCACAGCCAACTGCAT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLVLLF*NHSQLH
Trigger: ATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTTGGTCTTGCTCTTCTaGAACCACAGCCAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFLVLLF*NHSQLH
Trigger: ATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGAGGCAGCATCTGGCTaGTTTTCTACAACATCTGGT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYEAASG*FSTTSG
Trigger: ACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGTGATCCATGTTTGCTaGCTTGTTGCTGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFVIHVC*LVAELH
Trigger: GTGCAGTTCAGCAACAAGTCAGCAAACATGGATCAC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGTAATAGGTCTTAAGTaGCTGCTGGGGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYVIGLK*LLGRLK
Trigger: CTTCAACCTCCCCAGCAGTCACTTAAGACCTATTAC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280969.9
ENST00000321757.11
CDS-3UTR TCA 90 bp TCTGCAATTGCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGTGGAGGTTACGAGAATaGACAATTTCATCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SAIAHAISYLVICSLPDQWRLRE*TISSEK
Trigger: CTTTTCAGATGAAATTGTTCATTCTCGTAACCTCCA...CTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGCAATTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp ATCAAACATAACAGTCACAGCACTTTCTTCGAGCTTTTCAACTTCCCCATACAGTTCAAATTTTGGTCTTaGTCTTCTGAAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: IKHNSHSTFFELFNFPIQFKFWS*SSETTA
Trigger: GGCTGTGGTTTCAGAAGAGCAAGACCAAAATTTGAA...CTGTATGGGGAAGTTGAAAAGCTCGAAGAAAGTGCTGTGACTGTTATGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCCAAGGTCTCCAATTTaGAGCAGTCAAGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFPRSPI*SSQAEH
Trigger: ATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTCACTTAGCGGCAACATaGGATGAAAAGGACAGTTAT +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPIHLAAT*DEKDSY
Trigger: ATAACTGTCCTTTTCATCCCATGTTGCCGCTAAGTG...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp CACTTTATCAAACATAACAGTCACAGCACTTTCTTCGAGCTTTTCAACTTCCCCTGCCAATTATTCTGCTaGAATTCTTTGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: HFIKHNSHSTFFELFNFPCQLFC*NSLCTA
Trigger: AGCTGTACACAAAGAATTTCAGCAGAATAATTGGCA...GGGGAAGTTGAAAAGCTCGAAGAAAGTGCTGTGACTGTTATGTTTGATAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATACTGCAAACAGGGCATaGCTGCCCTTTAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYTANRA*LPFSFF
Trigger: AAAGAAACTAAAGGGCAGTCATGCCCTGTTTGCAGT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTAAAGGTTCCCTTAATTaGTGGATCCTAAGAACGATG +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPIKGSLN*WILRTM
Trigger: CATCGTTCTTAGGATCCATCAATTAAGGGAACCTTT...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATATGTTAACTTCCTCCTaGTCCATGTCCTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYMLTSS*SMSSGI
Trigger: AATGCCAGAGGACATGGAGCAGGAGGAAGTTAACAT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGAAACCACAGCCAACTaGATGCCAATTATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFETTAN*MPIILL
Trigger: CAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGAAACCACAGCCAACTaGATGCCAATTATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYETTAN*MPIILL
Trigger: CAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTTTCAAATTTTGGTCTTaGTCTTCTGAAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPIFKFWS*SSETTA
Trigger: GGCTGTGGTTTCAGAAGAGCAAGACCAAAATTTGAA...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTGAAGGCATCTGCAATTaGACATGCCATTTCATACTT +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPIEGICN*TCHFIL
Trigger: AAGTATGAAATGGCATGTGCAATTGCAGATGCCTTC...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGAGGTTGAAGGCATCTaGAATTGCACATGCCATTTC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYEVEGI*NCTCHF
Trigger: GAAATGGCATGTGCAATTGCAGATGCCTTCAACCTC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGTGCTCCCCATAAACTaGTATAAAAGCAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYVLPIN*YKSRRH
Trigger: ATGCCTCCTGCTTTTATAGCAGTTTATGGGGAGCAC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGATTCCAATTCGAAATaGTGTTCGTTGGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYDSNSK*CSLANA
Trigger: GGCATTGGCCAACGAACACCATTTCGAATTGGAATC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGATTCCAATTCGAAATaGTGTTCGTTGGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFDSNSK*CSLANA
Trigger: GGCATTGGCCAACGAACACCATTTCGAATTGGAATC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTTGCCAATTATTCTGCTaGAATTCTTTGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPICQLFC*NSLCTA
Trigger: AGCTGTACACAAAGAATTTCAGCAGAATAATTGGCA...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTCATTGCCAGACCAGTaGAAGGTTCCCTTAATTGAT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSLPDQ*KVPLID
Trigger: ATCAATTAAGGGAACCTTTCACTGGTCTGGCAATGA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCATTGCCAGACCAGTaGAAGGTTCCCTTAATTGAT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSLPDQ*KVPLID
Trigger: ATCAATTAAGGGAACCTTTCACTGGTCTGGCAATGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGAGGAAAGGCCAAAGTaGTTCTTTGATTCCAATTCG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFEERPK*FFDSNS
Trigger: CGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGAGGAAAGGCCAAAGTaGTTCTTTGATTCCAATTCG +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYEERPK*FFDSNS
Trigger: CGAATTGGAATCAAAGAATCACTTTGGCCTTTCCTC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCCATCTCTTGTCAATaGGGAAAGGCCAAAGTGATT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSISCQ*GKAKVI
Trigger: AATCACTTTGGCCTTTCCTCATTGACAAGAGATGGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTTCAAACATTTTGATCTaGGCTCAGGCAAAGCAAATA +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPISNILI*AQAKQI
Trigger: TATTTGCTTTGCCTGAGCTCAGATCAAAATGTTTGA...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCTCCAAGTACAGCTGTaGAAGTTCAAGCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLQVQL*KFKHGK
Trigger: TTTTCCATGCTTGAACTTTCACAGCTGTACTTGGAG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAATGTAGATGAGAAATaGTCCAACAGCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYNVDEK*SNSSCF
Trigger: GAAGCAGCTGCTGTTGGAGCATTTCTCATCTACATT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAATGTAGATGAGAAATaGTCCAACAGCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFNVDEK*SNSSCF
Trigger: GAAGCAGCTGCTGTTGGAGCATTTCTCATCTACATT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAGTCTACAGCAGATCTaGTTCATCCTGACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSLQQI*FILTLK
Trigger: TTTGAGAGTCAGGATGAAGCAGATCTGCTGTAGACT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTAACCTGTTCAAATTTTaGTCTTGCTCTTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPINLFKF*SCSSET
Trigger: GGTTTCAGAAGAGCAAGACCAAAATTTGAACAGGTT...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTTGAGAGGCAGCATCTaGCTGATTTTCTACAACATC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLRGSI*LIFYNI
Trigger: GATGTTGTAGAAAATCAGCCAGATGCTGCCTCTCAA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp TGTCTCCATCTCTTGTCAATGAGGAAAGGCCAAAGTGATTCTTTGATTCCAATTTTCCTCTCTGTAAGGTaGATTTGTTCCATCAAATAC +
Preference number: 4 (lower is better)
Translates to: CLHLLSMRKGQSDSLIPIFLSVR*ICSIKY
Trigger: GTATTTGATGGAACAAATCCACCTTACAGAGAGGAA...AATTGGAATCAAAGAATCACTTTGGCCTTTCCTCATTGACAAGAGATGGAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCACTTAGCGGCAACATaGGATGAAAAGGACAGTTAT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFHLAAT*DEKDSY
Trigger: ATAACTGTCCTTTTCATCCCATGTTGCCGCTAAGTG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCACTTAGCGGCAACATaGGATGAAAAGGACAGTTAT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYHLAAT*DEKDSY
Trigger: ATAACTGTCCTTTTCATCCCATGTTGCCGCTAAGTG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGTGAAAGTTCAAGCATaGAAAAGACAAAGCGGACCT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYVKVQA*KRQSGP
Trigger: AGGTCCGCTTTGTCTTTTCCATGCTTGAACTTTCAC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAAAGGTTCCCTTAATTaGTGGATCCAGCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYKGSLN*WIQHSL
Trigger: AAGAGAATGCTGGATCCATCAATTAAGGGAACCTTT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280969.9
ENST00000321757.11
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGCCAAAGTGATTCTTTaGTTCCAATTCGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYAKVIL*FQFEMV
Trigger: CACCATTTCGAATTGGAATCAAAGAATCACTTTGGC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGCCAAAGTGATTCTTTaGTTCCAATTCGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFAKVIL*FQFEMV
Trigger: CACCATTTCGAATTGGAATCAAAGAATCACTTTGGC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAGAGCATCATTTACCTaGAAGATCCTAAGAGTCACA +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFRASFT*KILRVT
Trigger: TGTGACTCTTAGGATCTTTCAGGTAAATGATGCTCT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCAGCTTCAAAAATCCTaGAAATATGGAGGTTACGAG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFQLQKS*KYGGYE
Trigger: CTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCAGCGGCAACATGGGATaGAAAGGACAGTTATATATT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSGNMG*KGQLYI
Trigger: AATATATAACTGTCCTTTTCATCCCATGTTGCCGCT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAGCGGCAACATGGGATaGAAAGGACAGTTATATATT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSGNMG*KGQLYI
Trigger: AATATATAACTGTCCTTTTCATCCCATGTTGCCGCT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTGTGCCTGGCCATTTTaGGGTTTTATATTTGCTACT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFCAWPF*GFIFAT
Trigger: AGTAGCAAATATAAAACCTCAAAATGGCCAGGCACA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAGTTTCATGTTTAATTaGCAGTCAAGCCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSFMFN*QSSLGL
Trigger: TAGACCCAGGCTTGACTGGCAATTAAACATGAAACT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTTCAAATTTTGGTCTTaGTCTTCTGAAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFFKFWS*SSETTA
Trigger: GGCTGTGGTTTCAGAAGAGCAAGACCAAAATTTGAA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTTCAAATTTTGGTCTTaGTCTTCTGAAACCACAGCC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYFKFWS*SSETTA
Trigger: GGCTGTGGTTTCAGAAGAGCAAGACCAAAATTTGAA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCATCTGGTCTTCTCTCTaGTGCACAATGTACTATAAC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFIWSSL*CTMYYN
Trigger: GTTATAGTACATTGTGCAGCAGAGAGAAGACCAGAT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGAAGGCATCTGCAATTaGACATGCCATTTCATACTT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYEGICN*TCHFIL
Trigger: AAGTATGAAATGGCATGTGCAATTGCAGATGCCTTC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGAAGGCATCTGCAATTaGACATGCCATTTCATACTT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFEGICN*TCHFIL
Trigger: AAGTATGAAATGGCATGTGCAATTGCAGATGCCTTC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR GCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCAACTTTTTCAAATGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFQLFQM*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACATTTGAAAAAGTTG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFIFYNI*SSLCCT
Trigger: TGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAAT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYIFYNI*SSLCCT
Trigger: TGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAAT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTGCCAATTATTCTGCTaGAATTCTTTGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYCQLFC*NSLCTA
Trigger: AGCTGTACACAAAGAATTTCAGCAGAATAATTGGCA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTGCCAATTATTCTGCTaGAATTCTTTGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFCQLFC*NSLCTA
Trigger: AGCTGTACACAAAGAATTTCAGCAGAATAATTGGCA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTGGAGGTTACGAGAATaGACAATTTCATCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFWRLRE*TISSEK
Trigger: CTTTTCAGATGAAATTGTTCATTCTCGTAACCTCCA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTCAAACATTTTGATCTaGGCTCAGGCAAAGCAAATA +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSNILI*AQAKQI
Trigger: TATTTGCTTTGCCTGAGCTCAGATCAAAATGTTTGA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATATTATTCATGAATGGTaGAAAGACTTACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYIIHEW*KDLQGP
Trigger: TGGGCCTTGTAAGTCTTTTCACCATTCATGAATAAT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR TCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCATTATTCATGAATGGTaGAAAGACTTACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFIIHEW*KDLQGP
Trigger: TGGGCCTTGTAAGTCTTTTCACCATTCATGAATAAT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATAACCTGTTCAAATTTTaGTCTTGCTCTTCTGAAACC +
Preference number: 4 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYNLFKF*SCSSET
Trigger: GGTTTCAGAAGAGCAAGACCAAAATTTGAACAGGTT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CCA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTTCCTCTCTGTAAGGTaGATTTGTTCCATCAAATAC +
Preference number: 4 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFFLSVR*ICSIKY
Trigger: GTATTTGATGGAACAAATCCACCTTACAGAGAGGAA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS GCA 90 bp TTCAGGAGAGCAGATACGGGATGGGTCTTAGCCTCTGCCTTCTCTTaGTGGGTCTTTGTTCGCTTCTGCCTGCAGAGAGCGCAGGCACGC +
Preference number: 5 (lower is better)
Translates to: FRRADTGWVLASAFS*WVFVRFCLQRAQAR
Trigger: GCGTGCCTGCGCTCTCTGCAGGCAGAAGCGAACAAAGACCCAGCAAGAGAAGGCAGAGGCTAAGACCCATCCCGTATCTGCTCTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280969.9
ENST00000519719.1
CDS GCA 90 bp CAGGACTCAGGAATCCTTCTTACCAGCATTCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACATCTTTGACATGTGTGGGGAACCTC +
Preference number: 5 (lower is better)
Translates to: QDSGILLTSILFSAS*RHTVATSLTCVGNL
Trigger: GAGGTTCCCCACACATGTCAAAGATGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAGAATGCTGGTAAGAAGGATTCCTGAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS GCA 90 bp AAGGTTCCCTTAATTGATGGATCCAGCATTCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACATCTTTGACATGTGTGGGGAACCTC +
Preference number: 5 (lower is better)
Translates to: KVPLIDGSSILFSAS*RHTVATSLTCVGNL
Trigger: GAGGTTCCCCACACATGTCAAAGATGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAGAATGCTGGATCCATCAATTAAGGGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000523606.1
CDS GCA 90 bp AGAGGCAGCATCTGGCTGATTTTCTACAACATCTGGTCTTCTCTCTaGTGCACAATGTACTATAACATGGGGCTCCACCAGCCGACAGCT +
Preference number: 5 (lower is better)
Translates to: RGSIWLIFYNIWSSL*CTMYYNMGLHQPTA
Trigger: AGCTGTCGGCTGGTGGAGCCCCATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421814.6
CDS TCA 90 bp ACAGTGGCCACATCTTTGACATGTGTGGGGAACCTCTGCTGCCAGTaGTCCATGTTTGCTGACTTGTTGCTGAACTGCACTTTATCAAAC +
Preference number: 5 (lower is better)
Translates to: TVATSLTCVGNLCCQ*SMFADLLLNCTLSN
Trigger: GTTTGATAAAGTGCAGTTCAGCAACAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTTCCCCACACATGTCAAAGATGTGGCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000518095.5
ENST00000523606.1
CDS-3UTR CAA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAACAGCAGCTCCTAGATaGTTCTCCAGGACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGTAAPR*FSRTAF
Trigger: AAAGGCTGTCCTGGAGAACAATCTAGGAGCTGCTGT...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CAA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGTGAAAGGCTATATTTaGAGGGCTTTGTTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGVKGYI*RALFPL
Trigger: CAGGGGGAACAAAGCCCTCAAAATATAGCCTTTCAC...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS TCA 90 bp TTTGACATGTGTGGGGAACCTCTGCTGCCAGTGATCCATGTTTGCTaGCTTGTTGCTGAACTGCACTTTATCAAACATAACAGTCACAGC +
Preference number: 5 (lower is better)
Translates to: FDMCGEPLLPVIHVC*LVAELHFIKHNSHS
Trigger: GCTGTGACTGTTATGTTTGATAAAGTGCAGTTCAGCAACAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTTCCCCACACATGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000518095.5
ENST00000523606.1
CDS CCA 90 bp CACATTAAGTTGAGAGGCAGCATCTGGCTGATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACAATGTACTATAACATGGGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: HIKLRGSIWLIFYNI*SSLCCTMYYNMGLH
Trigger: GTGGAGCCCCATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTCTCAACTTAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421814.6
CDS-3UTR CAA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGAGTTTGTCTCCATCTCTaGTCAATGAGGAAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGVCLHL*SMRKGQ
Trigger: TTGGCCTTTCCTCATTGACAAGAGATGGAGACAAAC...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS TCA 90 bp GCACATGCCATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGTaGAAGGTTCCCTTAATTGATGGATCCAGCATTCTCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: AHAISYLVICSLPDQ*KVPLIDGSSILFSA
Trigger: AGCAGAGAAGAGAATGCTGGATCCATCAATTAAGGGAACCTTTCACTGGTCTGGCAATGAACAGATGACTAAGTATGAAATGGCATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000523606.1
CDS CCA 90 bp CACATTAAGTTGAGAGGCAGCATCTGGCTGATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACAATGTACTATAACATGGGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: HIKLRGSIWLIFYNI*SSLCCTMYYNMGLK
Trigger: TTTCAGCCCCATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTCTCAACTTAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS CCA 90 bp CACATTAAGTTGAGAGGCAGCATCTGGCTGATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACAATGTACTATAACATGGGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: HIKLRGSIWLIFYNI*SSLCCTMYYNMGLE
Trigger: TTCTAGCCCCATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTCTCAACTTAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523606.1
CDS-3UTR CAA 90 bp ACTTTATCAAACATAACAGTCACAGCACTTTCTTCGAGCTTTTCAACTTCCCCAACAGCAGCTCCTAGATaGTTCTCCAGGACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: TLSNITVTALSSSFSTSPTAAPR*FSRTAF
Trigger: AAAGGCTGTCCTGGAGAACAATCTAGGAGCTGCTGT...TGGGGAAGTTGAAAAGCTCGAAGAAAGTGCTGTGACTGTTATGTTTGATAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520449.1
CDS-3UTR CAA 90 bp GATTCCAATTCGAAATGGTGTTCGTTGGCCAATGCCCAAGGTCTCCAATTTGGACTAATGAAAGACCGTTaGTCTCCATCTCTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: DSNSKWCSLANAQGLQFGLMKDR*SPSLVN
Trigger: ATTGACAAGAGATGGAGACAAACGGTCTTTCATTAG...TCCAAATTGGAGACCTTGGGCATTGGCCAACGAACACCATTTCGAATTGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS GCA 90 bp AACCTGTTCAAATTTTGGTCTTGCTCTTCTGAAACCACAGCCAACTaGATGCCAATTATTCTGCTGAAATTCTTTGTGTACAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NLFKFWSCSSETTAN*MPIILLKFFVYSSA
Trigger: GGCAGAGCTGTACACAAAGAATTTCAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAAAATTTGAACAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
ENST00000519719.1
ENST00000520449.1
ENST00000523606.1
CDS-3UTR CAA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCTCTTGCTGGGTCTTaGTTCGCTTCTGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSLAGS*FASACR
Trigger: TCTGCAGGCAGAAGCGAACAAAGACCCAGCAAGAGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280969.9
CDS-3UTR CAA 90 bp CCAGGAACTAAAAGGCAACCCTCTTTTTCTGGAAAGGTCTCCACAAGATATCTATCCATGTTTGCTGACTaGTTGCTGAACTGCACTTTA +
Preference number: 5 (lower is better)
Translates to: PGTKRQPSFSGKVSTRYLSMFAD*LLNCTL
Trigger: TAAAGTGCAGTTCAGCAACAAGTCAGCAAACATGGA...TAGATATCTTGTGGAGACCTTTCCAGAAAAAGAGGGTTGCCTTTTAGTTCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCACAGTGGCCACATCTTaGACATGTGTGGGGAACCTC +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFTVATS*TCVGNL
Trigger: GAGGTTCCCCACACATGTCAAAGATGTGGCCACTGT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATACAGTGGCCACATCTTaGACATGTGTGGGGAACCTC +
Preference number: 5 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYTVATS*TCVGNL
Trigger: GAGGTTCCCCACACATGTCAAAGATGTGGCCACTGT...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTCGAAATGGTGTTCGTaGGCCAATGCCCAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSKWCS*ANAQGL
Trigger: GAGACCTTGGGCATTGGCCAACGAACACCATTTCGA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATTCGAAATGGTGTTCGTaGGCCAATGCCCAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYSKWCS*ANAQGL
Trigger: GAGACCTTGGGCATTGGCCAACGAACACCATTTCGA...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCACAGCAGCTCCTAGATaGTTCTCCAGGACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFTAAPR*FSRTAF
Trigger: AAAGGCTGTCCTGGAGAACAATCTAGGAGCTGCTGT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGTTTGTCTCCATCTCTaGTCAATGAGGAAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFVCLHL*SMRKGQ
Trigger: TTGGCCTTTCCTCATTGACAAGAGATGGAGACAAAC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGTTTGTCTCCATCTCTaGTCAATGAGGAAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYVCLHL*SMRKGQ
Trigger: TTGGCCTTTCCTCATTGACAAGAGATGGAGACAAAC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCTCCATGTTTGCTGACTaGTTGCTGAACTGCACTTTA +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFSMFAD*LLNCTL
Trigger: TAAAGTGCAGTTCAGCAACAAGTCAGCAAACATGGA...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCATGTTTGCTGACTTGTaGCTGAACTGCACTTTATCA +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFMFADL*LNCTLS
Trigger: TGATAAAGTGCAGTTCAGCAACAAGTCAGCAAACAT...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCGGCCAAAGTGATTCTTaGATTCCAATTCGAAATGGT +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFGQSDS*IPIRNG
Trigger: ACCATTTCGAATTGGAATCAAAGAATCACTTTGGCC...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATGGCCAAAGTGATTCTTaGATTCCAATTCGAAATGGT +
Preference number: 5 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYGQSDS*IPIRNG
Trigger: ACCATTTCGAATTGGAATCAAAGAATCACTTTGGCC...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp GTCAACAGCTTCAAAAATCCTGAAAATATGGAGGTTACGAGAATGAACAATTTCCTAATGAAAGACCGTTaGTCTCCATCTCTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: VNSFKNPENMEVTRMNNFLMKDR*SPSLVN
Trigger: ATTGACAAGAGATGGAGACAAACGGTCTTTCATTAG...GAAATTGTTCATTCTCGTAACCTCCATATTTTCAGGATTTTTGAAGCTGTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS-3UTR CAA 90 bp AAGCAGGAGGCATCAAGCTGTAGAAGTTCCAATATACATAACATGTTGAAATATCTAATGAAAGACCGTTaGTCTCCATCTCTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: KQEASSCRSSNIHNMLKYLMKDR*SPSLVN
Trigger: ATTGACAAGAGATGGAGACAAACGGTCTTTCATTAG...ATATTTCAACATGTTATGTATATTGGAACTTCTACAGCTTGATGCCTCCTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
CDS GCA 72 bp GGAATCCTTCTTACCAGCATTCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACATCTTTGACATGTGTG +
Preference number: 6 (lower is better)
Translates to: GILLTSILFSAS*RHTVATSLTCV
Trigger: CACACATGTCAAAGATGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAGAATGCTGGTAAGAAGGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS TCA 72 bp CTTCCTCCTGCTCCATGTCCTCTGGCATTTCAGGCATaGCTCCAGAATTATTTCAGGAGAGCAGATACGGGA +
Preference number: 6 (lower is better)
Translates to: LPPAPCPLAFQA*LQNYFRRADTG
Trigger: TCCCGTATCTGCTCTCCTGAAATAATTCTGGAGTCATGCCTGAAATGCCAGAGGACATGGAGCAGGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280969.9
ENST00000519719.1
CDS TCA 72 bp ACATCTTTGACATGTGTGGGGAACCTCTGCTGCCAGTaGTCCATGTTTGCTGACTTGTTGCTGAACTGCACT +
Preference number: 6 (lower is better)
Translates to: TSLTCVGNLCCQ*SMFADLLLNCT
Trigger: AGTGCAGTTCAGCAACAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTTCCCCACACATGTCAAAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000518095.5
ENST00000523606.1
CDS GCA 72 bp TTAATTGATGGATCCAGCATTCTCTTCTCTGCTAGCTaGCGGCACACAGTGGCCACATCTTTGACATGTGTG +
Preference number: 6 (lower is better)
Translates to: LIDGSSILFSAS*RHTVATSLTCV
Trigger: CACACATGTCAAAGATGTGGCCACTGTGTGCCGGCAGCTAGCAGAGAAGAGAATGCTGGATCCATCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000523606.1
CDS TCA 72 bp CTGAAACCACAGCCAACTGCATGCCAATTATTCTGCTaGAATTCTTTGTGTACAGCTCTGCCAAGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: LKPQPTACQLFC*NSLCTALPRSP
Trigger: TGGGCTTCTTGGCAGAGCTGTACACAAAGAATTTCAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
ENST00000519719.1
ENST00000520449.1
ENST00000523606.1
CDS TCA 72 bp TGTGGGGAACCTCTGCTGCCAGTGATCCATGTTTGCTaGCTTGTTGCTGAACTGCACTTTATCAAACATAAC +
Preference number: 6 (lower is better)
Translates to: CGEPLLPVIHVC*LVAELHFIKHN
Trigger: GTTATGTTTGATAAAGTGCAGTTCAGCAACAAGTCAGCAAACATGGATCACTGGCAGCAGAGGTTCCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000518095.5
ENST00000523606.1
CDS GCA 72 bp ATCTGGCTGATTTTCTACAACATCTGGTCTTCTCTCTaGTGCACAATGTACTATAACATGGGGCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: IWLIFYNIWSSL*CTMYYNMGLHQ
Trigger: CTGGTGGAGCCCCATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421814.6
CDS TCA 72 bp TTTGGCTTTCACTCAGTAACACTCCAAGTACAGCTGTaGAAGTTCAAGCATGGAAAAGACAAAGCGGACCTT +
Preference number: 6 (lower is better)
Translates to: FGFHSVTLQVQL*KFKHGKDKADL
Trigger: AAGGTCCGCTTTGTCTTTTCCATGCTTGAACTTTCACAGCTGTACTTGGAGTGTTACTGAGTGAAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518095.5
CDS CCA 72 bp TTGAGAGGCAGCATCTGGCTGATTTTCTACAACATCTaGTCTTCTCTCTGCTGCACAATGTACTATAACATG +
Preference number: 6 (lower is better)
Translates to: LRGSIWLIFYNI*SSLCCTMYYNM
Trigger: CATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGATGCTGCCTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000518095.5
ENST00000523606.1
CDS GCA 72 bp ATCTGGCTGATTTTCTACAACATCTGGTCTTCTCTCTaGTGCACAATGTACTATAACATGGGGCTAGAAGTT +
Preference number: 6 (lower is better)
Translates to: IWLIFYNIWSSL*CTMYYNMGLEV
Trigger: AACTTCTAGCCCCATGTTATAGTACATTGTGCAGCAGAGAGAAGACCAGATGTTGTAGAAAATCAGCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523606.1
CDS TCA 72 bp ATTTCATACTTAGTCATCTGTTCATTGCCAGACCAGTaGAAGGTTCCCTTAATTGATGGATCCAGCATTCTC +
Preference number: 6 (lower is better)
Translates to: ISYLVICSLPDQ*KVPLIDGSSIL
Trigger: GAGAATGCTGGATCCATCAATTAAGGGAACCTTTCACTGGTCTGGCAATGAACAGATGACTAAGTATGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000421814.6
ENST00000523606.1
CDS GCA 72 bp AAATTTTGGTCTTGCTCTTCTGAAACCACAGCCAACTaGATGCCAATTATTCTGCTGAAATTCTTTGTGTAC +
Preference number: 6 (lower is better)
Translates to: KFWSCSSETTAN*MPIILLKFFVY
Trigger: GTACACAAAGAATTTCAGCAGAATAATTGGCATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280969.9
ENST00000321757.11
ENST00000518095.5
ENST00000519719.1
ENST00000520449.1
ENST00000523606.1