Pregenerated sensors for MAT2A (Homo sapiens)
Ensembl gene IDs: ENSG00000168906Ensembl transcript IDs: ENST00000306434.8, ENST00000409017.1, ENST00000465151.5, ENST00000469221.5, ENST00000481412.5
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCGCCCAGATACCACATGCGGCAAACACGTGGTCGCCGCTGCAATaGGGGGCGCGCGCTCCCGAGGGCCGGACGCGAGCACGCGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LAQIPHAANTWSPLQ*GARAPEGRTRARGA Trigger: CGCCCCGCGTGCTCGCGTCCGGCCCTCGGGAGCGCGCGCCCCGCATTGCAGCGGCGACCACGTGTTTGCCGCATGTGGTATCTGGGCGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409017.1 |
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| CDS GCA 90 bp | TCCCCCTCGCCCAGATACCACATGCGGCAAACACGTGGTCGCCGCTaGAATGCGGGGCGCGCGCTCCCGAGGGCCGGACGCGAGCACGCG | + |
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Preference number: 5 (lower is better) Translates to: SPSPRYHMRQTRGRR*NAGRALPRAGREHA Trigger: CGCGTGCTCGCGTCCGGCCCTCGGGAGCGCGCGCCCCGCATTGCAGCGGCGACCACGTGTTTGCCGCATGTGGTATCTGGGCGAGGGGGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409017.1 |
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| CDS CCA 90 bp | GGCTCACGGCTCCCCCTCGCCCAGATACCACATGCGGCAAACACGTaGTCGCCGCTGCAATGCGGGGCGCGCGCTCCCGAGGGCCGGACG | + |
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Preference number: 5 (lower is better) Translates to: GSRLPLAQIPHAANT*SPLQCGARAPEGRT Trigger: CGTCCGGCCCTCGGGAGCGCGCGCCCCGCATTGCAGCGGCGACCACGTGTTTGCCGCATGTGGTATCTGGGCGAGGGGGAGCCGTGAGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409017.1 |
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| CDS GCA 72 bp | CCCAGATACCACATGCGGCAAACACGTGGTCGCCGCTaGAATGCGGGGCGCGCGCTCCCGAGGGCCGGACGC | + |
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Preference number: 6 (lower is better) Translates to: PRYHMRQTRGRR*NAGRALPRAGR Trigger: GCGTCCGGCCCTCGGGAGCGCGCGCCCCGCATTGCAGCGGCGACCACGTGTTTGCCGCATGTGGTATCTGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409017.1 |
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| CDS GCA 72 bp | ATACCACATGCGGCAAACACGTGGTCGCCGCTGCAATaGGGGGCGCGCGCTCCCGAGGGCCGGACGCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: IPHAANTWSPLQ*GARAPEGRTRA Trigger: TGCTCGCGTCCGGCCCTCGGGAGCGCGCGCCCCGCATTGCAGCGGCGACCACGTGTTTGCCGCATGTGGTAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409017.1 |
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| CDS CCA 72 bp | CTCCCCCTCGCCCAGATACCACATGCGGCAAACACGTaGTCGCCGCTGCAATGCGGGGCGCGCGCTCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LPLAQIPHAANT*SPLQCGARAPE Trigger: CTCGGGAGCGCGCGCCCCGCATTGCAGCGGCGACCACGTGTTTGCCGCATGTGGTATCTGGGCGAGGGGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409017.1 |
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| CDS CAA 72 bp | AACGCCTCGTGGAAGCCGTTGAGCTGTCCGTTCATGTaGGTGTCGGTGTGCGGAAGTGGCCTTACGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: NASWKPLSCPFM*VSVCGSGLTKE Trigger: CTCCTTCGTAAGGCCACTTCCGCACACCGACACCAACATGAACGGACAGCTCAACGGCTTCCACGAGGCGTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306434.8 ENST00000465151.5 ENST00000469221.5 |
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| CDS TCA 72 bp | TTTATGCTATCTTTCCACCAGTTGATAAGCACATTCTaGACCTACCACAAGCTACTTTGGCATCAGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: FMLSFHQLISTF*TYHKLLWHQDP Trigger: AGGATCCTGATGCCAAAGTAGCTTGTGGTAGGTTCAGAATGTGCTTATCAACTGGTGGAAAGATAGCATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465151.5 |
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| CDS CAA 72 bp | GTTACTTTACGCCTAGTGCTTTCCAAGTGGATTAGGTaGCCTATTCTGAATTCATTCAGCAAATATCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VTLRLVLSKWIR*PILNSFSKYPP Trigger: CGGAGGATATTTGCTGAATGAATTCAGAATAGGCAACCTAATCCACTTGGAAAGCACTAGGCGTAAAGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481412.5 |
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