RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAST4 (Homo sapiens)

Ensembl gene IDs: ENSG00000069020

Ensembl transcript IDs: ENST00000261569.11, ENST00000403625.6, ENST00000403666.5, ENST00000405643.5, ENST00000406039.5, ENST00000406374.5, ENST00000407621.1, ENST00000411628.5, ENST00000432426.5, ENST00000432817.5, ENST00000434115.5, ENST00000436277.5, ENST00000443808.1, ENST00000447738.1, ENST00000450827.5, ENST00000451144.1, ENST00000452953.5, ENST00000470421.1, ENST00000478569.1, ENST00000485768.1, ENST00000490016.6

Found 1545 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTaGAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: GSELCLADIPTQCWF*KVVKTQSPVQDGSP
Trigger: TGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR CCA 90 bp AACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTaGGATGGCCGTGTAATGAAAATGGCTAGCTCCACTTGTCCTGGC +
Preference number: 1 (lower is better)
Translates to: NNWPFRQLDQGSSVH*DGRVMKMASSTCPG
Trigger: GCCAGGACAAGTGGAGCTAGCCATTTTCATTACACGGCCATCCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR TCA 90 bp AGAGCCCAACTGAGCTCTGCAAGAGAAAAACTACTCAGTGAAGACTaGAATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGAC +
Preference number: 1 (lower is better)
Translates to: RAQLSSAREKLLSED*NCNPSGTLWHSQAD
Trigger: GTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATTTCAGTCTTCACTGAGTAGTTTTTCTCTTGCAGAGCTCAGTTGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490016.6
3UTR TCA 90 bp TGGGATTTATCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGTaGGTGAAACTAAGCACTCCATCTGCTAAGGGTAGAACGTTGTCA +
Preference number: 1 (lower is better)
Translates to: WDLSKQSRASSIIWW*VKLSTPSAKGRTLS
Trigger: TGACAACGTTCTACCCTTAGCAGATGGAGTGCTTAGTTTCACTCACCACCAGATTATTGAACTGGCTCGAGATTGCTTGGATAAATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR GCA 90 bp CCAAGTATACAAGCTCAGTTCTGCCACAACAATTCTATCCATCTCTaGTTCTCCTTCCTCAAAGGTCCAGCACTGTGTAATCCTAAAGCA +
Preference number: 1 (lower is better)
Translates to: PSIQAQFCHNNSIHL*FSFLKGPALCNPKA
Trigger: TGCTTTAGGATTACACAGTGCTGGACCTTTGAGGAAGGAGAAGCAGAGATGGATAGAATTGTTGTGGCAGAACTGAGCTTGTATACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
3UTR GCA 90 bp ATACAAATAAAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATaGAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGC +
Preference number: 1 (lower is better)
Translates to: IQIKRSGYEMCGATR*SRNECETQELAKNS
Trigger: GCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTTTATTTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR GCA 90 bp CAATTCATTTTACAACGAAGGACAACTGAGCAGTCGGTTAAGTTATaGCTTTGTTTTCAGAGTGGAGTTTATAGCCTCACTAGAAGATTT +
Preference number: 1 (lower is better)
Translates to: QFILQRRTTEQSVKL*LCFQSGVYSLTRRF
Trigger: AAATCTTCTAGTGAGGCTATAAACTCCACTCTGAAAACAAAGGCATAACTTAACCGACTGCTCAGTTGTCCTTCGTTGTAAAATGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR CAA 90 bp AGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: RLRALPGGHSHTVLV*KGSQDTVARSGRVS
Trigger: GGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR-3UTR CCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGAAACTGGGAAGGCATCTaGAAGAAGGTCCCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGNWEGI*KKVPSL
Trigger: CAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTT...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR-3UTR TCA 90 bp TATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGTaGGTGAAACTAAGCACTCCA +
Preference number: 2 (lower is better)
Translates to: YREVMRPWWDLSKQSRASSIIWW*VKLSTP
Trigger: TGGAGTGCTTAGTTTCACTCACCACCAGATTATTGA...ACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTTACCGGTTACAACTaGGAAGGCATCTGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQFTGYN*EGIWKK
Trigger: CTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAA...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR-3UTR CCA 90 bp TATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTATCATAATTATTTCATaGTCACAGCAGGCGGGAGAA +
Preference number: 2 (lower is better)
Translates to: YREVMRPWWDLSKQSRASIIIIS*SQQAGE
Trigger: TTCTCCCGCCTGCTGTGACCATGAAATAATTATGAT...ACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR-3UTR TCA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATAAGGCTTGTAAACCATaGACTACCTCCCCGACAGAC +
Preference number: 2 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNKACKP*TTSPTD
Trigger: GTCTGTCGGGGAGGTAGTTCATGGTTTACAAGCCTT...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR-3UTR TCA 90 bp TTATCTAATTTGTGCTGTAATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGAGACGTTCTTCCATCTaGGCTGTAGCCTTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LSNLCCNSRKYREVMRPWRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCTACAGCTCAGATGGAAGAACGTCT...CCAGGGCCTCATCACCTCACGATACTTCCTTGAATTACAGCACAAATTAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR CAA 90 bp GTGGAGCTACTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTaGCTAAAAACAGCAAGCTTCATCTACAACATAAGGCCCCAGCTA +
Preference number: 2 (lower is better)
Translates to: VELLDAAEMNVKPRN*LKTASFIYNIRPQL
Trigger: TAGCTGGGGCCTTATGTTGTAGATGAAGCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAGTAGCTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR-3UTR CCA 90 bp TTATCTAATTTGTGCTGTAATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGCTGAGCTGTAGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 2 (lower is better)
Translates to: LSNLCCNSRKYREVMRPWLSCSL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCTACAGCTCAG...CCAGGGCCTCATCACCTCACGATACTTCCTTGAATTACAGCACAAATTAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR-3UTR TCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTACACAGTGCTGGTTTTaGAAGGTAGTCAAGACACAG +
Preference number: 2 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASTQCWF*KVVKTQ
Trigger: CTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGT...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
3UTR-3UTR GCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTATCGATATGCTACGATaGCAAAATCCACCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: KRSGYEMCGATRCSRNECIDMLR*QNPPPV
Trigger: AACTGGGGGTGGATTTTGGCATCGTAGCATATCGAT...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR CCA 72 bp TCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTaGCGGACATTCCCACACAGTGCTGGTTTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: SLPCLNEAPSSA*RTFPHSAGFER
Trigger: CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR TCA 72 bp CTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTaGAAGGTAGTCAAGACACAGTCGCCCGTTCAGGAC +
Preference number: 3 (lower is better)
Translates to: LCLADIPTQCWF*KVVKTQSPVQD
Trigger: GTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR CCA 72 bp GGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTaGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: GNSFTGYNWEGI*KKVPSLSFSLP
Trigger: GGGGAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR CCA 72 bp CCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTaGGATGGCCGTGTAATGAAAATGGCTAGCTCCACT +
Preference number: 3 (lower is better)
Translates to: PFRQLDQGSSVH*DGRVMKMASST
Trigger: AGTGGAGCTAGCCATTTTCATTACACGGCCATCCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACA +
Preference number: 3 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSHTVLV*KGSQDT
Trigger: TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR-3UTR CAA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAAATCCCCCAAGAGAGTTaGGGTGCTAGATCAGTTATT +
Preference number: 3 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKIPQES*GARSVI
Trigger: AATAACTGATCTAGCACCCAAACTCTCTTGGGGGAT...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR CCA 72 bp TGTAATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTaGTGGGATTTATCCAAGCAATCTCGAGCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: CNSRKYREVMRP*WDLSKQSRASS
Trigger: TGAACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGAATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR TCA 72 bp TCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGTaGGTGAAACTAAGCACTCCATCTGCTAAGGGTAGA +
Preference number: 3 (lower is better)
Translates to: SKQSRASSIIWW*VKLSTPSAKGR
Trigger: TCTACCCTTAGCAGATGGAGTGCTTAGTTTCACTCACCACCAGATTATTGAACTGGCTCGAGATTGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR TCA 72 bp CTGAGCTCTGCAAGAGAAAAACTACTCAGTGAAGACTaGAATTGCAACCCTTCTGGGACACTCTGGCATTCT +
Preference number: 3 (lower is better)
Translates to: LSSAREKLLSED*NCNPSGTLWHS
Trigger: AGAATGCCAGAGTGTCCCAGAAGGGTTGCAATTTCAGTCTTCACTGAGTAGTTTTTCTCTTGCAGAGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490016.6
3UTR GCA 72 bp CAAGCTCAGTTCTGCCACAACAATTCTATCCATCTCTaGTTCTCCTTCCTCAAAGGTCCAGCACTGTGTAAT +
Preference number: 3 (lower is better)
Translates to: QAQFCHNNSIHL*FSFLKGPALCN
Trigger: ATTACACAGTGCTGGACCTTTGAGGAAGGAGAAGCAGAGATGGATAGAATTGTTGTGGCAGAACTGAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
3UTR GCA 72 bp ATACCCTCCACAGGACCAAGTATACAAGCTCAGTTCTaGCACAACAATTCTATCCATCTCTGCTTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: IPSTGPSIQAQF*HNNSIHLCFSF
Trigger: GAAGGAGAAGCAGAGATGGATAGAATTGTTGTGGCAGAACTGAGCTTGTATACTTGGTCCTGTGGAGGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
3UTR CCA 72 bp CAAACACTATCTGGTAACAGTTTTACCGGTTACAACTaGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: QTLSGNSFTGYN*EGIWKKVPSLS
Trigger: AGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
3UTR CCA 72 bp AATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGTaGGATTTATCCAAGCAATCTCGAGCCAGTTCAATA +
Preference number: 3 (lower is better)
Translates to: NSRKYREVMRPW*DLSKQSRASSI
Trigger: TATTGAACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
3UTR GCA 72 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATaGAGCAGAAATGAATGTGAAACCCAGGAACTTGCT +
Preference number: 3 (lower is better)
Translates to: KRSGYEMCGATR*SRNECETQELA
Trigger: AGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR GCA 72 bp TTACAACGAAGGACAACTGAGCAGTCGGTTAAGTTATaGCTTTGTTTTCAGAGTGGAGTTTATAGCCTCACT +
Preference number: 3 (lower is better)
Translates to: LQRRTTEQSVKL*LCFQSGVYSLT
Trigger: AGTGAGGCTATAAACTCCACTCTGAAAACAAAGGCATAACTTAACCGACTGCTCAGTTGTCCTTCGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR GCA 72 bp TCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTaGCAAACACAGATATGTATTATAAACGTTGAGACC +
Preference number: 3 (lower is better)
Translates to: SRWLNVGLGYDN*QTQICIINVET
Trigger: GGTCTCAACGTTTATAATACATATCTGTGTTTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR-3UTR CAA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGCACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACA +
Preference number: 3 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKHTVLV*KGSQDT
Trigger: TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTG...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGCGGGCAGCGTGGCCTaGCCAGGTCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAAGSVA*PGQGCG
Trigger: TCCACAGCCCTGACCTGGCCAGGCCACGCTGCCCGC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTGGCCCCCGGCTCTCTaGCAGAAGCGTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAWPPAL*QKRGLG
Trigger: CCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCAAGTCCCCGCCACCCTaGCGGTGCTCCGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGKSPPP*RCSAGT
Trigger: GGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTT...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGCTTGGGAGGGTCCTaGGGGCTCGAGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGLGGS*GLELGS
Trigger: AGAGCCCAGCTCGAGCCCCCAGGACCCTCCCAAGCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGGGCCGCCCACCACTaGTGGGTTGTGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGAAHH*WVVAWR
Trigger: ACGCCAAGCCACAACCCACCAGTGGTGGGCGGCCCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCGGACTGCACGCGCTTaGGCAGCGGGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLRTARA*AAGTWG
Trigger: CCCCCAGGTCCCCGCTGCTCAAGCGCGTGCAGTCCG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCATCCTTCAGCAGGCTaGCCAGCGGTGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAHPSAG*PAVAPP
Trigger: AGGAGGCGCCACCGCTGGGCAGCCTGCTGAAGGATG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGGGAACTGCAATGCTaGCTGGCAGCCGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGELQC*LAAGLD
Trigger: GTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGGGGGAAGCTTCAGGTaGGAGCGGGCAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGGGSFR*ERAAWP
Trigger: AGGCCACGCTGCCCGCTCCCACCTGAAGCTTCCCCC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTGGGCTCTGCAGTGCTaGGCTTGGCCCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGWALQC*AWPPAL
Trigger: GAGAGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGGCTTGGGAGGGTCCTaGGGGCTCGAGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGGLGGS*GLELGS
Trigger: AGAGCCCAGCTCGAGCCCCCAGGACCCTCCCAAGCC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACCCCCACCCCCGCGGCTaGCCGCTCCGCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHPHPRG*PLRAFQ
Trigger: TTGAAAGGCGCGGAGCGGCCAGCCGCGGGGGTGGGG...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTCCGTCGGTGGCTTCTaGGGACCGGGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWASVGGF*GPGPFP
Trigger: AGGGAAAGGGCCCGGTCCCCAGAAGCCACCGACGGA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGAGCGGGGGCCCGTCTaGAGTCCCCGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHERGPV*SPRHPG
Trigger: GCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTGGGCTGGGGCTCTGTaGAGACTCTGGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAWAGAL*RLWGRQ
Trigger: CTGCCTTCCCCAGAGTCTGCACAGAGCCCCAGCCCA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGGCTGTGGAGGTTCTaGCCCAGGCAGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGLWRF*PRQVRS
Trigger: GCTTCTGACCTGCCTGGGGCAGAACCTCCACAGCCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGCCGGGGCTTGTGGCTaGTGCTTTCACTGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAAGACG*CFHCAQ
Trigger: CTGCGCACAGTGAAAGCAGCAGCCACAAGCCCCGGC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCTCCAGCAGCACGCTTaGCGGAGCCCACGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVLQQHA*RSPRGG
Trigger: CCCGCCGCGTGGGCTCCGGCAAGCGTGCTGCTGGAG...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGGCCCAGGGCCTGGCTaGGCATGCGCACGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHGPGPG*ACARGW
Trigger: CCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGCTGATGGTGCTGGCTaGGGTGGTGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAADGAG*GGDLRL
Trigger: GAGCCTGAGGTCACCACCCCAGCCAGCACCATCAGC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTAGCGGCGCCTCCCGCTaGGACTGCTCCCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSGASR*DCSRCT
Trigger: GGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCT...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCGCTGGCGCGCACGCTaGCCTGCTTGTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWARWRAR*PACEEH
Trigger: ATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGCGGGCAGCGTGGCCTaGCCAGGTCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTAGSVA*PGQGCG
Trigger: TCCACAGCCCTGACCTGGCCAGGCCACGCTGCCCGC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGAGCGGGCAGCGTaGCCTGGCCAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPWERAA*PGQVRA
Trigger: AGCCCTGACCTGGCCAGGCCACGCTGCCCGCTCCCA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGCCTGGCAGCCGGGCTaGACAGGTCTTTGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGAWQPG*TGLWPS
Trigger: TGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCGCTGCCGAGCCATGTaGGAAGCGGGTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWARCRAM*EAGSLD
Trigger: ATCCAGTGAACCCGCTTCTCACATGGCTCGGCAGCG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACAGAAGAGGGGATGGTaGCCGCTGCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTQKRGW*PLRGGG
Trigger: CCCACCTCCCCGCAGCGGTCACCATCCCCTCTTCTG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGCCTCACGATGTGTCTaGCGATGGTGGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGASRCV*RWWAGS
Trigger: ACTCCCCGCCCACCATCGTCAGACACATCGTGAGGC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACCCTCCCCGGCAGGCTaGGCCTTCCTATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTPSPAG*AFLWSL
Trigger: CAGGGACCATAGGAAGGCTCAGCCTGCCGGGGAGGG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACCGGACCGGTACCGCTaGCCGCCGAGTTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTPDRYR*PPSLGA
Trigger: TGCACCCAAACTCGGCGGGCAGCGGTACCGGTCCGG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGGGGATGGTGACCGCTaGGGGGAGGTGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPGDGDR*GEVGCG
Trigger: CCCGCAACCCACCTCCCCGCAGCGGTCACCATCCCC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCCTCCAGGCTGTGCTTaGGGGAGCACAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAPPGCA*GSTGAS
Trigger: AGAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGACCATCCTGGAGGGTaGCAGGAGCGGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERDHPGG*QERGPV
Trigger: GACGGGCCCCCGCTCCTGGCACCCTCCAGGATGGTC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGGGCGGAGGGATGCTaGTGGGATGCCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGAEGC*WDAFVE
Trigger: CTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGGAGCCCTGTCAGTGTaGAGTGGGACAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGGALSV*SGTEGP
Trigger: TGGGCCCTCTGTCCCACTGCACACTGACAGGGCTCC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCAGGCTGGAGTCCGGCTaGCGTGGCCACTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPRLESG*RGHCSR
Trigger: GCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCACCGCTGCGGGGAGGTaGGTTGCGGGGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPTAAGR*VAGLER
Trigger: CCTCTCCAACCCCGCAACCCACCTCCCCGCAGCGGT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGACCGCTGCGGGGAGGTaGGTTGCGGGGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLTAAGR*VAGLER
Trigger: CCTCTCCAACCCCGCAACCCACCTCCCCGCAGCGGT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCAGGCTGCCCAGCGGTaGCGCCTCCTGCATAGACGC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLQAAQR*RLLHRR
Trigger: GCGTCTATGCAGGAGGCGCCACCGCTGGGCAGCCTG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTAAGTCCCCGCCACCCTaGCGGTGCTCCGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVKSPPP*RCSAGT
Trigger: GGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCAAGTCCCCGCCACCCTaGCGGTGCTCCGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPKSPPP*RCSAGT
Trigger: GGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCCTGCTGCCCACCCGTaGGTCGGACTGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLPAAHP*VGLGSL
Trigger: CAGGGAACCCAGTCCGACCCACGGGTGGGCAGCAGG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTCTGGAGACCTCGGCTaGGGGGCAGGAACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGSGDLG*GAGTKA
Trigger: AGCCTTGGTTCCTGCCCCCCAGCCGAGGTCTCCAGA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGCGGGCAGCGTGGCCTaGCCAGGTCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVAGSVA*PGQGCG
Trigger: TCCACAGCCCTGACCTGGCCAGGCCACGCTGCCCGC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACCCCTTCTGTCGGTGTTaGCGGCCGGCTGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHPFCRC*RPADSG
Trigger: GCCCGAGTCAGCCGGCCGCCAACACCGACAGAAGGG...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGGCTGGCCCCGCCCATaGTGTTTGGGTCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPGWPRP*CLGRGG
Trigger: ACCACCCCGACCCAAACACCATGGGCGGGGCCAGCC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGAGCGGGGGCCCGTCTaGAGTCCCCGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVERGPV*SPRHPG
Trigger: GCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTCTGTCTTGGAGGCCTaGGGTCCGGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGSVLEA*GPDRRA
Trigger: TGCTCTCCTGTCCGGACCTCAGGCCTCCAAGACAGA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGAGCCACCGAGGGACTaGGTGGCAGGCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLEPPRD*VAGSLP
Trigger: GGGCAAAGAGCCTGCCACTCAGTCCCTCGGTGGCTC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCCGGACCGGTACCGCTaGCCGCCGAGTTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERPDRYR*PPSLGA
Trigger: TGCACCCAAACTCGGCGGGCAGCGGTACCGGTCCGG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGGGACAGTGGGATGTTaGCGGCGGACTTTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGGTVGC*RRTFAF
Trigger: GAAGGCGAAAGTCCGCCGGCAACATCCCACTGTCCC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCGTTTCAGGCAGCCTTaGTCCACTGGCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVRFRQP*STGRAR
Trigger: CCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACG...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCATCCTTCAGCAGGCTaGCCAGCGGTGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPHPSAG*PAVAPP
Trigger: AGGAGGCGCCACCGCTGGGCAGCCTGCTGAAGGATG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCCCCCTTCCCAGAGATaGCCCTGTCGAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLPPSQR*PCRGSG
Trigger: GCCACTCCCTCGACAGGGGCATCTCTGGGAAGGGGG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGGCGGGGGCTCCTGCTaGCCACCCGTGGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSGGGSC*PPVGRT
Trigger: AGTCCGACCCACGGGTGGGCAGCAGGAGCCCCCGCC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGGGGAACTGCAATGCTaGCTGGCAGCCGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLGELQC*LAAGLD
Trigger: GTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGGGTCTCCACAGTCCTaGCCCTGGGCCCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVGSPQS*PWALPV
Trigger: AACGGGGAGGGCCCAGGGGCAGGACTGTGGAGACCC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGGTGGAGCGGTAGCTTaGTGTTGGAGACCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGGGAVA*CWRPGR
Trigger: TCTCCCCGGTCTCCAACACCAAGCTACCGCTCCACC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGACCGTGGAGAGTGCTaGGCCGGATGTGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVDRGEC*AGCART
Trigger: GGTCCGGGCACATCCGGCCCAGCACTCTCCACGGTC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTAGCGGCGCCTCCCGCTaGGACTGCTCCCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSSGASR*DCSRCT
Trigger: GGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCT...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGCAGCCTTGCTCCACTaGCCGGGCGCGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSAALLH*PGAAER
Trigger: CCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCACCTTCCGGGAGACTaGGCGTTTCAGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGHLPGD*AFQAAL
Trigger: CAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTG...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTCGTCCACAGACTCCTaGCGGCCCACCTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPSSTDS*RPTFRE
Trigger: CTCCCGGAAGGTGGGCCGCCAGGAGTCTGTGGACGA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCTCACGTCACCACTTaGGCTGGGGCTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGPHVTT*AGALCR
Trigger: TCTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGG...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGCCAGGTCAGGGCTGTaGAGGTTCTGCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPARSGL*RFCPRQ
Trigger: CTGCCTGGGGCAGAACCTCCACAGCCCTGACCTGGC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGGGGAAGCTTCAGGTaGGAGCGGGCAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGGSFR*ERAAWP
Trigger: AGGCCACGCTGCCCGCTCCCACCTGAAGCTTCCCCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCACTCTCAATTCCAGGTaGCTGCAGAGACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWATLNSR*LQRPPG
Trigger: GCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTGGGCTCTGCAGTGCTaGGCTTGGCCCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERWALQC*AWPPAL
Trigger: GAGAGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCCCTTCTGTCGGTGTTaGCGGCCGGCTGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERPFCRC*RPADSG
Trigger: GCCCGAGTCAGCCGGCCGCCAACACCGACAGAAGGG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTGCCCCCGGCGGCCTTaGCAGAAGAGGTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERCPRRP*QKRCRC
Trigger: GCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTCACTCTTTGTCATGTaGGTTCGGCCCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWASLFVM*VRPSPA
Trigger: TGCCGGGGAGGGCCGAACCCACATGACAAAGAGTGA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGTGTTTGGGTCGGGGTaGTGTGACTCCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGVFGSG*CDSRGR
Trigger: CCTGCCTCTGGAGTCACACCACCCCGACCCAAACAC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGATCGGCTTCAGGCATaGGACAGACCTACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWADRLQA*DRPTFQ
Trigger: CTGGAAGGTAGGTCTGTCTCATGCCTGAAGCCGATC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCGGACCGGTACCGCTaGCCGCCGAGTTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFPDRYR*PPSLGA
Trigger: TGCACCCAAACTCGGCGGGCAGCGGTACCGGTCCGG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGTCACCTCCAGGCTGTaGTTGCGGGAGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPVTSRL*LREHRC
Trigger: GCACCTGTGCTCCCGCAAGCACAGCCTGGAGGTGAC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGCCTCCCGCTGGGACTaGTCCCGCTGCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFASRWD*SRCTSS
Trigger: AGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTTCTCATCCAGGCTCTaGAGCGGCGCCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERFSSRL*SGASRW
Trigger: CCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCGTTTCAGGCAGCCTTaGTCCACTGGCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHRFRQP*STGRAR
Trigger: CCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGACCATCCTGGAGGGTaGCAGGAGCGGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLDHPGG*QERGPV
Trigger: GACGGGCCCCCGCTCCTGGCACCCTCCAGGATGGTC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGGGCTGTGGAGGTTCTaGCCCAGGCAGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTGLWRF*PRQVRS
Trigger: GCTTCTGACCTGCCTGGGGCAGAACCTCCACAGCCC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTCCCACCCGGCGCCCATaGTTTCTCCATGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGPTRRP*FLHGLG
Trigger: ACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGG...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCAGCTGGGCTCTGCAGTaGTGGGCTTGGCCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSWALQ*WAWPPA
Trigger: AGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCAGCT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAAGGGACCGGTCGGGGTaGTTAGTCTTTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTRDRSG*LVFGGP
Trigger: GGGCCCTCCAAAGACTAAGCACCCCGACCGGTCCCT...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGCTGATGGTGCTGGCTaGGGTGGTGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLADGAG*GGDLRL
Trigger: GAGCCTGAGGTCACCACCCCAGCCAGCACCATCAGC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCATGGGAAGTCAGGGGTaGAGCGGTAGCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAMGSQG*SGSLVL
Trigger: CAACACCAAGCTACCGCTCCACCCCTGACTTCCCAT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGCCCGGACCCTGCTaGGGAATTGGGGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLVPGPC*GIGGTR
Trigger: TCTAGTGCCCCCAATTCCCCAGCAGGGTCCGGGCAC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGTGCCCGGACCCTGCTaGGGAATTGGGGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHVPGPC*GIGGTR
Trigger: TCTAGTGCCCCCAATTCCCCAGCAGGGTCCGGGCAC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCGTCCACAGACTCCTaGCGGCCCACCTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSSTDS*RPTFRE
Trigger: CTCCCGGAAGGTGGGCCGCCAGGAGTCTGTGGACGA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCACATCGCACCCTCGCTaGCGCGCACGCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFTSHPR*RARWPA
Trigger: AGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTGGCAGAGACCATCCTaGAGGGTGCCAGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVWQRPS*RVPGAG
Trigger: CCCCGCTCCTGGCACCCTCCAGGATGGTCTCTGCCA...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTCGGACTGGGTTCCCTaGCAGGCATTCGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLSDWVP*QAFVGA
Trigger: GGCTCCCACGAATGCCTGCCAGGGAACCCAGTCCGA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTCGGACTGGGTTCCCTaGCAGGCATTCGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHSDWVP*QAFVGA
Trigger: GGCTCCCACGAATGCCTGCCAGGGAACCCAGTCCGA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGACCCGTGGGTCGGACTaGGTTCCCTGGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLTRGSD*VPWQAF
Trigger: GAATGCCTGCCAGGGAACCCAGTCCGACCCACGGGT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCAAGGCAGTTCTGTCTTaGAGGCCTGAGGTCCGGACA +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAKAVLS*RPEVRT
Trigger: TGTCCGGACCTCAGGCCTCCAAGACAGAACTGCCTT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTCTGGAGACCTCGGCTaGGGGGCAGGAACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHSGDLG*GAGTKA
Trigger: AGCCTTGGTTCCTGCCCCCCAGCCGAGGTCTCCAGA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGCCAGGTCAGGGCTGTaGAGGTTCTGCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPARSGL*RFCPRQ
Trigger: CTGCCTGGGGCAGAACCTCCACAGCCCTGACCTGGC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGAGAGGAGTTGTCTCTaGGCGGGGGCCTCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPERSCL*AGASPH
Trigger: GTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGGCTGGACAGGTCTTTaGCCGTCAGAGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPGWTGL*PSEGAE
Trigger: CTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGCTGGACAGGTCTTTaGCCGTCAGAGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGWTGL*PSEGAE
Trigger: CTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACCCAGGCCGGGGCTTGTaGCTGCTGCTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHPGRGL*LLLSLC
Trigger: GCACAGTGAAAGCAGCAGCCACAAGCCCCGGCCTGG...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTGTGGCCCCGACACTTaGTTTCTGAGAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWACGPDT*FLRGEG
Trigger: TCCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGGCCCACCTTCTCCCTaGCCAATCCCATCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPGPPSP*PIPSLA
Trigger: AGCCAGCGATGGGATTGGCCAGGGAGAAGGTGGGCC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCCCCACCCCCGCGGCTaGCCGCTCCGCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVPHPRG*PLRAFQ
Trigger: TTGAAAGGCGCGGAGCGGCCAGCCGCGGGGGTGGGG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCCGTCGGTGGCTTCTaGGGACCGGGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSVGGF*GPGPFP
Trigger: AGGGAAAGGGCCCGGTCCCCAGAAGCCACCGACGGA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGGGCTGGGGATGGCTTaGTCACGTCTCTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLGLGMA*SRLCPR
Trigger: ACGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGTCAGTGTTTGGGGCTaGGGATGGCTTGGTCACGTC +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGVSVWG*GWLGHV
Trigger: GACGTGACCAAGCCATCCCCAGCCCCAAACACTGAC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGACCAGCGCAGAGGCTaGAGTCCGGCTGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSDQRRG*SPAAVA
Trigger: GGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTTCAAGGAAGTATCGTaGGGTGATGAGGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAFKEVS*GDEALV
Trigger: CACCAGGGCCTCATCACCTCACGATACTTCCTTGAA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGCCTCACGATGTGTCTaGCGATGGTGGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERASRCV*RWWAGS
Trigger: ACTCCCCGCCCACCATCGTCAGACACATCGTGAGGC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGTGTTGGCGGCCGGCTaGCTCGGGCTTTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGVLAAG*LGLLSV
Trigger: GACAGACAAAAGCCCGAGTCAGCCGGCCGCCAACAC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCCCCGGCAGGCTaGGCCTTCCTATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLPSPAG*AFLWSL
Trigger: CAGGGACCATAGGAAGGCTCAGCCTGCCGGGGAGGG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGATGTGCCCGGACCCTaGTGGGGAATTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVDVPGP*WGIGGT
Trigger: AGTGCCCCCAATTCCCCAGCAGGGTCCGGGCACATC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGCGGGGAGTGCATCTTaGTGGGAAAGGCTTGCGCGA +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTAGSAS*WERLAR
Trigger: TCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGCGGGGAGTGCATCTTaGTGGGAAAGGCTTGCGCGA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHAGSAS*WERLAR
Trigger: TCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCCTCCAGGCTGTGCTTaGGGGAGCACAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPPPGCA*GSTGAS
Trigger: AGAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGCCTCCCGCTGGGACTaGTCCCGCTGCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSASRWD*SRCTSS
Trigger: AGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGCCGGGGCTTGTGGCTaGTGCTTTCACTGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERAGACG*CFHCAQ
Trigger: CTGCGCACAGTGAAAGCAGCAGCCACAAGCCCCGGC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGCCATTGGGCTTGTCTaGCTCCGTCGGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHAIGLV*LRRWLL
Trigger: CAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGAGGTTGGACGTCTCTaGAGAGGCCGGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHEVGRL*RGRPGL
Trigger: CAGGCCTGGCCGGCCTCTGCAGAGACGTCCAACCTC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTTTCCTGGCTCCTCATaGGGGTCTCCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHFPGSS*GSPGQE
Trigger: CTCCTGCCCTGGAGACCCCCATGAGGAGCCAGGAAA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGCTGATGGTGCTGGCTaGGGTGGTGACCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVADGAG*GGDLRL
Trigger: GAGCCTGAGGTCACCACCCCAGCCAGCACCATCAGC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCATGGGAAGTCAGGGGTaGAGCGGTAGCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGMGSQG*SGSLVL
Trigger: CAACACCAAGCTACCGCTCCACCCCTGACTTCCCAT...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATTGGGTGCAAGACCGTaGAGAGTGCTGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTLGARP*RVLGRM
Trigger: CATCCGGCCCAGCACTCTCCACGGTCTTGCACCCAA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTTGGGTGCAAGACCGTaGAGAGTGCTGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHLGARP*RVLGRM
Trigger: CATCCGGCCCAGCACTCTCCACGGTCTTGCACCCAA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGCTGCCCGCCGAGTTTaGGTGCAAGACCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERAARRV*VQDRGE
Trigger: CTCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGCAGCCTTGCTCCACTaGCCGGGCGCGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTAALLH*PGAAER
Trigger: CCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCAGGCTGCCCAGCGGTaGCGCCTCCTGCATAGACGC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLQAAQR*RLLHRR
Trigger: GCGTCTATGCAGGAGGCGCCACCGCTGGGCAGCCTG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGCTGGCGCGCACGCTaGCCTGCTTGTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPRWRAR*PACEEH
Trigger: ATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTCGGACTGGGTTCCCTaGCAGGCATTCGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERSDWVP*QAFVGA
Trigger: GGCTCCCACGAATGCCTGCCAGGGAACCCAGTCCGA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGCTCGCTTCTGGCTGTaGGAGGGCCTCTTTCAGACG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHARFWL*EGLFQT
Trigger: CGTCTGAAAGAGGCCCTCCCACAGCCAGAAGCGAGC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGAAGCGCTTCGGGCTTaGGTTCCACGCCACGCCTCA +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPEALRA*VPRHAS
Trigger: TGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGGCTGGACAGGTCTTTaGCCGTCAGAGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFGWTGL*PSEGAE
Trigger: CTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTCTCTGCCAGAAGCGTaGCTTGGGGAACTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGSLPEA*LGELQC
Trigger: GCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTGTGGCCCCGACACTTaGTTTCTGAGAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGCGPDT*FLRGEG
Trigger: TCCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGCTCTTTGCCCTTTGTaGCCCCGACACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAALCPL*PRHLVS
Trigger: AGAAACCAAGTGTCGGGGCCACAAAGGGCAAAGAGC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGGCCCACCTTCTCCCTaGCCAATCCCATCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVGPPSP*PIPSLA
Trigger: AGCCAGCGATGGGATTGGCCAGGGAGAAGGTGGGCC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCAGTTTCTGGTCCGCTaGCTCACTAGGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLQFLVR*LTRPWV
Trigger: CACCCAGGGCCTAGTGAGCCAGCGGACCAGAAACTG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGTCTGCCTCCGTCGGTaGCTTCTGGGGACCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDVCLRR*LLGTGP
Trigger: GGGCCCGGTCCCCAGAAGCCACCGACGGAGGCAGAC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTGGTTTCAGGGAAGCTaGAGGAGCAGCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAWFQGS*RSSSET
Trigger: AGTCTCTGAGCTGCTCCTCCAGCTTCCCTGAAACCA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCAGAGCCCTGTCCCGGTaGCTGGCCCCGCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVRALSR*LAPPMV
Trigger: CACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGGCTGGGGATGGCTTaGTCACGTCTCTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGLGMA*SRLCPR
Trigger: ACGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGTTTGGGGCTGGGGATaGCTTGGTCACGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHVWGWG*LGHVSA
Trigger: GGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAAC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCAGACGTTCTTCCATCTaGGCTGTAGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWARRSSI*AVAFGN
Trigger: GTTCCCAAAGGCTACAGCTCAGATGGAAGAACGTCT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCGGGGAGACAAGCTATaGGTGGGGGAACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHRGDKL*VGEPGR
Trigger: CCTCCCAGGTTCCCCCACTCATAGCTTGTCTCCCCG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCACGCTGGCCTGCTTGTaGAGAGCATCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPTLACL*RASFSR
Trigger: CCTGCTGAAGGATGCTCTTCACAAGCAGGCCAGCGT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTCTGTCTTGGAGGCCTaGGGTCCGGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERSVLEA*GPDRRA
Trigger: TGCTCTCCTGTCCGGACCTCAGGCCTCCAAGACAGA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGAGCCACCGAGGGACTaGGTGGCAGGCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLEPPRD*VAGSLP
Trigger: GGGCAAAGAGCCTGCCACTCAGTCCCTCGGTGGCTC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGGGCGGCGGCGGCGGCTaGTGCTCTCTGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQGGGGG*CSLEKP
Trigger: CGGCTTCTCCAGAGAGCATCAGCCGCCGCCGCCGCC...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCCAGCCTTCAGTCCTaGCTGGCATGCCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSSLQS*LACRTS
Trigger: GGAAGTCCGGCATGCCAGGCAGGACTGAAGGCTGGA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGATGTGCCCGGACCCTaGTGGGGAATTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHDVPGP*WGIGGT
Trigger: AGTGCCCCCAATTCCCCAGCAGGGTCCGGGCACATC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCAAGACCGTGGAGAGTaGTGGGCCGGATGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLQDRGE*WAGCAR
Trigger: CCGGGCACATCCGGCCCAGCACTCTCCACGGTCTTG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCCGCCGAGTTTGGGTaGAAGACCGTGGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPPAEFG*KTVESA
Trigger: AGCACTCTCCACGGTCTTGCACCCAAACTCGGCGGG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGGGGATGGTGACCGCTaGGGGGAGGTGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLGDGDR*GEVGCG
Trigger: CCCGCAACCCACCTCCCCGCAGCGGTCACCATCCCC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGATGGTGGGCGGGGAGTaGATCTTGCTGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLMVGGE*ILLGKA
Trigger: AGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCAT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCTCCAGGCTGTGCTTaGGGGAGCACAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPPPGCA*GSTGAS
Trigger: AGAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGTCACCTCCAGGCTGTaGTTGCGGGAGCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHVTSRL*LREHRC
Trigger: GCACCTGTGCTCCCGCAAGCACAGCCTGGAGGTGAC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGCCTCCCGCTGGGACTaGTCCCGCTGCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDASRWD*SRCTSS
Trigger: AGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGAGCAATGTCCAGAGTaGCCTCGATCGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLEQCPE*PRSASG
Trigger: GCCTGAAGCCGATCGAGGGCACTCTGGACATTGCTC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGAGCAATGTCCAGAGTaGCCTCGATCGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTEQCPE*PRSASG
Trigger: GCCTGAAGCCGATCGAGGGCACTCTGGACATTGCTC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCATGGAGGGCTCTCTaGATGTGTCAGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPPWRAL*MCQPSQ
Trigger: CTGCGAGGGCTGACACATGCAGAGAGCCCTCCATGG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCACCCGGCGCCCATaGTTTCTCCATGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLPTRRP*FLHGLG
Trigger: ACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGGGATGCTGCTGGGATaGCTTTGTAGAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLGMLLG*LCRGCS
Trigger: GGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGGGATGCTGCTGGGATaGCTTTGTAGAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTGMLLG*LCRGCS
Trigger: GGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGGGGAACTGCAATGCTaGCTGGCAGCCGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLGELQC*LAAGLD
Trigger: GTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCAGCTGGGCTCTGCAGTaGTGGGCTTGGCCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVSWALQ*WAWPPA
Trigger: AGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCAGCT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGCTCGAGCTGGGCTCTaGAGTGCTGGGCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDARAGL*SAGLGP
Trigger: GGGGCCAAGCCCAGCACTGCAGAGCCCAGCTCGAGC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGCTCGAGCTGGGCTCTaGAGTGCTGGGCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVARAGL*SAGLGP
Trigger: GGGGCCAAGCCCAGCACTGCAGAGCCCAGCTCGAGC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGAGTGGCAGGCTCTTTaGCCTTTGTGGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFEREWQAL*PLWPRH
Trigger: GTGTCGGGGCCACAAAGGGCAAAGAGCCTGCCACTC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCCCGGCCTTGGCAAATaGACAGGCTTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERPGLGK*TGFSST
Trigger: GGTGCTGGAGAAGCCTGTGCATTTGCCAAGGCCGGG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTTTCCTGGCTCCTCATaGGGGTCTCCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERFPGSS*GSPGQE
Trigger: CTCCTGCCCTGGAGACCCCCATGAGGAGCCAGGAAA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCAAGGGCTGGCTTTCCTaGCTCCTCATGGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPKGWLS*LLMGVS
Trigger: GGAGACCCCCATGAGGAGCCAGGAAAGCCAGCCCTT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGACCTCAGGCTCCTCCTaGGCACACTCTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLTSGSS*AHSSGG
Trigger: TCCTCCTGAAGAGTGTGCCCAGGAGGAGCCTGAGGT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCACCTCAGGCTCCTCCTaGGCACACTCTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPTSGSS*AHSSGG
Trigger: TCCTCCTGAAGAGTGTGCCCAGGAGGAGCCTGAGGT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGCCTTCAGTCCTGCCTaGCATGCCGGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPAFSPA*HAGLPS
Trigger: AGAAGGAAGTCCGGCATGCCAGGCAGGACTGAAGGC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGTGCCCGGACCCTGCTaGGGAATTGGGGGCACTAGA +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHVPGPC*GIGGTR
Trigger: TCTAGTGCCCCCAATTCCCCAGCAGGGTCCGGGCAC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGGTGGGTTGCGGGGTTaGAGAGGGCGTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVGGLRG*RGRPGQ
Trigger: CTGGCCCGGACGCCCTCTCCAACCCCGCAACCCACC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACCGCTGCGGGGAGGTaGGTTGCGGGGTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDTAAGR*VAGLER
Trigger: CCTCTCCAACCCCGCAACCCACCTCCCCGCAGCGGT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTAGCGGCGCCTCCCGCTaGGACTGCTCCCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSGASR*DCSRCT
Trigger: GGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCT...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCACCTTCCGGGAGACTaGGCGTTTCAGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERHLPGD*AFQAAL
Trigger: CAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCCTGCTGCCCACCCGTaGGTCGGACTGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVPAAHP*VGLGSL
Trigger: CAGGGAACCCAGTCCGACCCACGGGTGGGCAGCAGG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTGGGAGCGGGCAGCGTaGCCTGGCCAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVWERAA*PGQVRA
Trigger: AGCCCTGACCTGGCCAGGCCACGCTGCCCGCTCCCA...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCAGAGCGCTCGCTTCTaGCTGTGGGAGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVQSARF*LWEGLF
Trigger: AAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTG...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCAGAGCGCTCGCTTCTaGCTGTGGGAGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERQSARF*LWEGLF
Trigger: AAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGAGAGGAGTTGTCTCTaGGCGGGGGCCTCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLERSCL*AGASPH
Trigger: GTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACTCTCAATTCCAGGTaGCTGCAGAGACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHTLNSR*LQRPPG
Trigger: GCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGCCAGAAGCGTGGCTTaGGGAACTGCAATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTARSVA*GTAMLP
Trigger: AGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGCGCAGCAACAGGCTTaGGAGGGTCCTGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDAQQQA*EGPGGS
Trigger: CGAGCCCCCAGGACCCTCCCAAGCCTGTTGCTGCGC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCAGGCCGGGGCTTGTaGCTGCTGCTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFPGRGL*LLLSLC
Trigger: GCACAGTGAAAGCAGCAGCCACAAGCCCCGGCCTGG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTCGCTGGCTTTGTTCTaGGAGCCTGGGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPSLALF*EPGVAG
Trigger: TCCTGCTACCCCAGGCTCCCAGAACAAAGCCAGCGA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGGGGCCGCCCACCACTaGTGGGTTGTGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDGAAHH*WVVAWR
Trigger: ACGCCAAGCCACAACCCACCAGTGGTGGGCGGCCCC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCAGTTTCTGGTCCGCTaGCTCACTAGGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPQFLVR*LTRPWV
Trigger: CACCCAGGGCCTAGTGAGCCAGCGGACCAGAAACTG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCAGTTTCTGGTCCGCTaGCTCACTAGGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERQFLVR*LTRPWV
Trigger: CACCCAGGGCCTAGTGAGCCAGCGGACCAGAAACTG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAACAGCGGACAGTTTCTaGTCCGCTGGCTCACTAGGC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTTADSF*SAGSLG
Trigger: GCCTAGTGAGCCAGCGGACCAGAAACTGTCCGCTGT...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTCACAGTGGATGGTTTaGGGTGCTTTGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGSQWMV*GALETG
Trigger: CCCTGTCTCCAAAGCACCCCAAACCATCCACTGTGA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCCCTTCTGTCGGTGTTaGCGGCCGGCTGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDPFCRC*RPADSG
Trigger: GCCCGAGTCAGCCGGCCGCCAACACCGACAGAAGGG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCTTGTCGCCCTCTGCTaGAGCATAAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWALVALC*SIKCFS
Trigger: ACTGAAGCACTTTATGCTCCAGCAGAGGGCGACAAG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGTCTGCCTCCGTCGGTaGCTTCTGGGGACCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVVCLRR*LLGTGP
Trigger: GGGCCCGGTCCCCAGAAGCCACCGACGGAGGCAGAC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTGCCTCCGTCGGTaGCTTCTGGGGACCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTVCLRR*LLGTGP
Trigger: GGGCCCGGTCCCCAGAAGCCACCGACGGAGGCAGAC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTTTCCGGGAGGGCCGTaGATCGGAAAGAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHFPGGP*IGKNSA
Trigger: GGCAGAGTTCTTTCCGATCCACGGCCCTCCCGGAAA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTATGGTCCCTGTTGCTaGGGGCTGGAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLYGPCC*GLEAPA
Trigger: TGCTGGAGCTTCCAGCCCCCAGCAACAGGGACCATA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGGCTGGCCCCGCCCATaGTGTTTGGGTCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDGWPRP*CLGRGG
Trigger: ACCACCCCGACCCAAACACCATGGGCGGGGCCAGCC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGTTTGGGGCTGGGGATaGCTTGGTCACGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPVWGWG*LGHVSA
Trigger: GGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAAC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTCAGTGTTTGGGGCTaGGGATGGCTTGGTCACGTC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTVSVWG*GWLGHV
Trigger: GACGTGACCAAGCCATCCCCAGCCCCAAACACTGAC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGGGCGGTCAGTGTTTaGGGCTGGGGATGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGAVSV*GWGWLG
Trigger: ACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGCTCCGAGCTCTGCCTaGCGGACATTCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVAPSSA*RTFPHS
Trigger: ACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCTTGGAATTGCCCAGTaGGTGTCCCAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLLGIAQ*VSQKRG
Trigger: TCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGAGCGGGGGCCCGTCTaGAGTCCCCGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSERGPV*SPRHPG
Trigger: GCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTCTGCATGGGTGCTGCTaGCAAAAGCTCGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGLHGCC*QKLGSQ
Trigger: CTGAGAGCCGAGCTTTTGTCAGCAGCACCCATGCAG...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGGCCTGTTAAGGCCTTaGGGGGAACAAAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHGLLRP*GEQKRR
Trigger: CCGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGATCGGCTTCAGGCATaGGACAGACCTACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHDRLQA*DRPTFQ
Trigger: CTGGAAGGTAGGTCTGTCTCATGCCTGAAGCCGATC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGTGTTGGCGGCCGGCTaGCTCGGGCTTTTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLVLAAG*LGLLSV
Trigger: GACAGACAAAAGCCCGAGTCAGCCGGCCGCCAACAC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTGGGTCGGGGTGGTGTaGCTCCAGAGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDWVGVV*LQRQGG
Trigger: TCCACCCTGCCTCTGGAGTCACACCACCCCGACCCA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCCGCTCTACCTCAGGTaGAGGCCAGACATCCACATC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERPLYLR*RPDIHI
Trigger: GATGTGGATGTCTGGCCTTCACCTGAGGTAGAGCGG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGGCATCAGGTGGGGGTaGCTCATCCTTCTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFGIRWG*LILLRP
Trigger: TGGCCTGAGAAGGATGAGGCACCCCCACCTGATGCC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCAGTCCTGCCTGGCATaGCGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPQSCLA*RTSFFY
Trigger: GTAGAAGAAGGAAGTCCGGCATGCCAGGCAGGACTG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGGGGGATGGTGACCGCTaGGGGGAGGTGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGGDGDR*GEVGCG
Trigger: CCCGCAACCCACCTCCCCGCAGCGGTCACCATCCCC...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGCGGGGAGTGCATCTTaGTGGGAAAGGCTTGCGCGA +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHAGSAS*WERLAR
Trigger: TCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCCCCCTTCCCAGAGATaGCCCTGTCGAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVPPSQR*PCRGSG
Trigger: GCCACTCCCTCGACAGGGGCATCTCTGGGAAGGGGG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTGGGCTGGGGCTCTGTaGAGACTCTGGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLWAGAL*RLWGRQ
Trigger: CTGCCTTCCCCAGAGTCTGCACAGAGCCCCAGCCCA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCATGGAGGGCTCTCTaGATGTGTCAGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFPWRAL*MCQPSQ
Trigger: CTGCGAGGGCTGACACATGCAGAGAGCCCTCCATGG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTCAATTCCAGGTGGCTaGAGAGACCGCCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPSIPGG*RDRLAR
Trigger: TCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGGGCGGAGGGATGCTaGTGGGATGCCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGAEGC*WDAFVE
Trigger: CTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGCCCCCGGCTCTCTaGCAGAAGCGTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLWPPAL*QKRGLG
Trigger: CCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGCCGGGGCTTGTGGCTaGTGCTTTCACTGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLAGACG*CFHCAQ
Trigger: CTGCGCACAGTGAAAGCAGCAGCCACAAGCCCCGGC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCCGGCCTTGGCAAATaGACAGGCTTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFPGLGK*TGFSST
Trigger: GGTGCTGGAGAAGCCTGTGCATTTGCCAAGGCCGGG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCCCGGCCTTGGCAAATaGACAGGCTTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHPGLGK*TGFSST
Trigger: GGTGCTGGAGAAGCCTGTGCATTTGCCAAGGCCGGG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGAGGGGGACCGTTTCATaGCATTGGGCTTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLRGTVS*HWACLP
Trigger: AGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGATCGGAAAGAACTCTaGCCAGTGGCTGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVDRKEL*PVAEGD
Trigger: GTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGTGTCGCTGCTGGCTaGAGAGGCCTCTCTAACTCC +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGVAAG*RGLSNS
Trigger: GGAGTTAGAGAGGCCTCTGCAGCCAGCAGCGACACC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCAGAAGAGGTGTCGCTaGTGGCTGCAGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFQKRCR*WLQRPL
Trigger: GAGAGGCCTCTGCAGCCAGCAGCGACACCTCTTCTG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCCTATGGTCCCTGTTaGTGGGGGCTGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSYGPC*WGLEAP
Trigger: TGGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATCTTTCCCCCGCCTCTaGCGTACCACAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTSFPRL*RTTKSF
Trigger: GAAGGACTTTGTGGTACGGCAGAGGCGGGGGAAAGA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGGTCTCCACAGTCCTaGCCCTGGGCCCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGSPQS*PWALPV
Trigger: AACGGGGAGGGCCCAGGGGCAGGACTGTGGAGACCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCTGCATCTGTTCTCAGTaGCGATGCTTTCGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGCICSQ*RCFRWY
Trigger: GTACCACCGAAAGCATCGCCACTGAGAACAGATGCA...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTGTCCTTCTTTGGCATaGCCTTCTGCTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWACPSLA*PSAASN
Trigger: ATTGGAAGCAGCAGAAGGCCATGCCAAAGAAGGACA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCATCCTGGGCATCAGGTaGGGGTGCCTCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPILGIR*GCLILL
Trigger: GAGAAGGATGAGGCACCCCCACCTGATGCCCAGGAT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGACCGTGGAGAGTGCTaGGCCGGATGTGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLDRGEC*AGCART
Trigger: GGTCCGGGCACATCCGGCCCAGCACTCTCCACGGTC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGGGAGTGCATCTTGCTaGGAAAGGCTTGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTGSASC*ERLARS
Trigger: AGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATCACTCCCGGGTCCATaGGATTTCTGGTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTSLPGP*DFWWDS
Trigger: GGAATCCCACCAGAAATCCCATGGACCCGGGAGTGA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCGCTGGCGCGCACGCTaGCCTGCTTGTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSRWRAR*PACEEH
Trigger: ATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCACATCGCACCCTCGCTaGCGCGCACGCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVTSHPR*RARWPA
Trigger: AGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTGGCAGAGACCATCCTaGAGGGTGCCAGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDWQRPS*RVPGAG
Trigger: CCCCGCTCCTGGCACCCTCCAGGATGGTCTCTGCCA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCAGAAGCTCCTTGGCCTaGGAGGACTTCTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPRSSLA*EDFSVP
Trigger: AGGCACGGAGAAGTCCTCCCAGGCCAAGGAGCTTCT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCTGGCAGGCATTCGTaGGAGCCAGCTGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPPGRHS*EPAVIL
Trigger: CAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCCTGGCAGGCATTCGTaGGAGCCAGCTGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERPGRHS*EPAVIL
Trigger: CAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCCTGCTGCCCACCCGTaGGTCGGACTGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVPAAHP*VGLGSL
Trigger: CAGGGAACCCAGTCCGACCCACGGGTGGGCAGCAGG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATTTTCCCACTGCTGCTaGGGAGAACTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTFSHCC*GELVAQ
Trigger: CTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGGCAGGTCAGAAGCTTaGGGTCAGTGGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLGRSEA*GQWCGL
Trigger: AAGACCACACCACTGACCCCAAGCTTCTGACCTGCC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCAGAGCGCTCGCTTCTaGCTGTGGGAGGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFQSARF*LWEGLF
Trigger: AAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGCTGCAGAGACCGCCTaGCAAGAAGCGCTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSAAETA*QEALRA
Trigger: AGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGCGGAGGGATGCTGCTaGGATGCCTTTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPAEGCC*DAFVEA
Trigger: AGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGCCTGGCAGCCGGGCTaGACAGGTCTTTGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDAWQPG*TGLWPS
Trigger: TGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTCTCTGCCAGAAGCGTaGCTTGGGGAACTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHSLPEA*LGELQC
Trigger: GCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATCTCTGCCAGAAGCGTaGCTTGGGGAACTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTSLPEA*LGELQC
Trigger: GCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGCGCAGCAACAGGCTTaGGAGGGTCCTGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVAQQQA*EGPGGS
Trigger: CGAGCCCCCAGGACCCTCCCAAGCCTGTTGCTGCGC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCACCGAGGGACTGAGTaGCAGGCTCTTTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVHRGTE*QALCPL
Trigger: CAAAGGGCAAAGAGCCTGCCACTCAGTCCCTCGGTG...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGGCCCACTCTTACTGTaGCCCTTCCCCTCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVGPLLL*PFPSLL
Trigger: TAGCAGAGAGGGGAAGGGCCACAGTAAGAGTGGGCC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTGGTGGGTTGTGGCTTaGCGTCTAGAGGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPWWVVA*RLEEPC
Trigger: ACAGGGCTCCTCTAGACGCCAAGCCACAACCCACCA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTGGCTCACTAGGCCCTaGGTGTCCCGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSWLTRP*VSRPWQ
Trigger: TTGCCAAGGCCGGGACACCCAGGGCCTAGTGAGCCA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAACCCCACCCCCGCGGCTaGCCGCTCCGCGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKPHPRG*PLRAFQ
Trigger: TTGAAAGGCGCGGAGCGGCCAGCCGCGGGGGTGGGG...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGACCGTTTCATGCCATTaGGCTTGTCTGCCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLTVSCH*ACLPPS
Trigger: CGACGGAGGCAGACAAGCCCAATGGCATGAAACGGT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACAAGAACTCTGCCCAGTaGCTGAGGGGGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHKNSAQ*LRGTVS
Trigger: TGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTCACTCTTTGTCATGTaGGTTCGGCCCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVSLFVM*VRPSPA
Trigger: TGCCGGGGAGGGCCGAACCCACATGACAAAGAGTGA...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGCTGGCCCCGCCCATaGTGTTTGGGTCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGWPRP*CLGRGG
Trigger: ACCACCCCGACCCAAACACCATGGGCGGGGCCAGCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCCCTGTCCCGGTGGCTaGCCCCGCCCATGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVPCPGG*PRPWCL
Trigger: CAAACACCATGGGCGGGGCCAGCCACCGGGACAGGG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGGGGCGGTCAGTGTTTaGGGCTGGGGATGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSGAVSV*GWGWLG
Trigger: ACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCAACTGGGAAGGCATCTaGAAGAAGGTCCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGNWEGI*KKVPSL
Trigger: CAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTT...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCTGGGAGGAACAGGATaGAGAGACCGTAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHLGGTG*RDRRAG
Trigger: CCCAGCTCTACGGTCTCTTCATCCTGTTCCTCCCAG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCAGAGAGGGACTTTGTaGCTTTCCCCGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGQRGTL*LSPRFS
Trigger: AGAAAATCTCGGGGAAAGTCACAAAGTCCCTCTCTG...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGGAGAGGAATCTCGTaGAGAAGAAGGGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGRGIS*RRRVRG
Trigger: TCCTCGGACCCTTCTTCTTCACGAGATTCCTCTCCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCACTGGCAGAAGCTGCTaGGGAATCTCGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFTGRSC*GISAGR
Trigger: TCTCCCAGCCGAGATTCCTCAGCAGCTTCTGCCAGT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATGGATCACAATCGGCTaGTGTGGACTGGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTWITIG*CGLAEA
Trigger: AGCTTCTGCCAGTCCACATCAGCCGATTGTGATCCA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCAGAAGAGGGGATGGTaGCCGCTGCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLQKRGW*PLRGGG
Trigger: CCCACCTCCCCGCAGCGGTCACCATCCCCTCTTCTG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCTGCATGGGTGCTGCTaGCAAAAGCTCGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFLHGCC*QKLGSQ
Trigger: CTGAGAGCCGAGCTTTTGTCAGCAGCACCCATGCAG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGGCCTGTTAAGGCCTTaGGGGGAACAAAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVGLLRP*GEQKRR
Trigger: CCGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGATCGGCTTCAGGCATaGGACAGACCTACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPDRLQA*DRPTFQ
Trigger: CTGGAAGGTAGGTCTGTCTCATGCCTGAAGCCGATC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCCGACACTTGGTTTCTaGGAGGAGAGGGACCGGTCG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSPTLGF*EERDRS
Trigger: CGACCGGTCCCTCTCCTCTCAGAAACCAAGTGTCGG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTCTCCCCTGTCTCAATaGGGCTCCGAGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLSPLSQ*GSELCL
Trigger: CAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGAGCGACTACATGGCAGTaGCGGGGCCGCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGATTWQ*RGRRSP
Trigger: CGGGCTCCTGCGGCCCCGTCACTGCCATGTAGTCGC...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPASACS*ICSQWR
Trigger: TCGCCACTGAGAACAGATGCAGGAACACGCCGATGC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTCAGTCCTGCCTGGCATaGCGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGQSCLA*RTSFFY
Trigger: GTAGAAGAAGGAAGTCCGGCATGCCAGGCAGGACTG...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTCCAGCCTTCAGTCCTaGCTGGCATGCCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSSSLQS*LACRTS
Trigger: GGAAGTCCGGCATGCCAGGCAGGACTGAAGGCTGGA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGTGTGGACAAGTCCATaGACTGGTTCTCCATTGATG +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGVWTSP*TGSPLM
Trigger: CATCAATGGAGAACCAGTGCATGGACTTGTCCACAC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTCTTCTTGGATTTCTTaGTCCGCCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHSSWIS*SASPSG
Trigger: GCCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCCCGCCGAGTTTGGGTaGAAGACCGTGGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSPAEFG*KTVESA
Trigger: AGCACTCTCCACGGTCTTGCACCCAAACTCGGCGGG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTCTTTTTCCCACTGCTaGTGGGGAGAACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHSFSHC*WGELVA
Trigger: TGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCAATTCCAGGTGGCTaGAGAGACCGCCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPSIPGG*RDRLAR
Trigger: TCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGAGGGGGCGGAGGGATaGTGCTGGGATGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLEGAEG*CWDAFV
Trigger: TACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCAGCTGGGCTCTGCAGTaGTGGGCTTGGCCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLSWALQ*WAWPPA
Trigger: AGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCAGCT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACGCTCGAGCTGGGCTCTaGAGTGCTGGGCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDARAGL*SAGLGP
Trigger: GGGGCCAAGCCCAGCACTGCAGAGCCCAGCTCGAGC...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGGGCTTGTGGCTGCTaGTTTCACTGTGCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGACGC*FHCAQQ
Trigger: TTGCTGCGCACAGTGAAAGCAGCAGCCACAAGCCCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGAACCGGTTCTCGCTATaGACAAAGGAAAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERNRFSL*TKERPA
Trigger: GGCCGGCCTTTCCTTTGTGCATAGCGAGAACCGGTT...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGCCATTGGGCTTGTCTaGCTCCGTCGGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSAIGLV*LRRWLL
Trigger: CAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGGGTCTCCACAGTCCTaGCCCTGGGCCCTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLGSPQS*PWALPV
Trigger: AACGGGGAGGGCCCAGGGGCAGGACTGTGGAGACCC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCCGAGGACAGGGAATaGGGAGACATTGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPSEDRE*GDIGLP
Trigger: GGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGACCGTGGAGAGTGCTaGGCCGGATGTGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSDRGEC*AGCART
Trigger: GGTCCGGGCACATCCGGCCCAGCACTCTCCACGGTC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGCTGCCCGCCGAGTTTaGGTGCAAGACCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVAARRV*VQDRGE
Trigger: CTCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAAGGCTTGCGCGATCTTaGAATTGCCCAGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTRLARS*NCPVSV
Trigger: GACACTCACTGGGCAATTCCAAGATCGCGCAAGCCT...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGCAGCCTTGCTCCACTaGCCGGGCGCGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSAALLH*PGAAER
Trigger: CCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCTTCACCACCACCTTaGCCTTCAGCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPSSPPP*PSACRG
Trigger: ACCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACACATCGCACCCTCGCTaGCGCGCACGCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDTSHPR*RARWPA
Trigger: AGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGT...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTAGCCAGCTGTCATCTTaGGCTTCAGCACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVSQLSS*ASAQGR
Trigger: TCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACCCGTGGGTCGGACTaGGTTCCCTGGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDTRGSD*VPWQAF
Trigger: GAATGCCTGCCAGGGAACCCAGTCCGACCCACGGGT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCTCCTGGCAGTAGGATaGGGACCTTTCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFLLAVG*GPFLSL
Trigger: GAGGGACAGGAAAGGTCCCCATCCTACTGCCAGGAG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTTGGGGTCAGTGGTGTaGTCTTGGTGTTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLLGSVV*SWCLGE
Trigger: CTCCCCTAAACACCAAGACCACACCACTGACCCCAA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGTTTTCGCAGTTTCTaGAAAGCACAGTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGFRSF*KAQFHG
Trigger: TCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGGGCCTCGCCTCACCTaGGCCATCTTTGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSGPRLT*AIFVVR
Trigger: ACGAACCACAAAGATGGCCCAGGTGAGGCGAGGCCC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGCCTGGCAGCCGGGCTaGACAGGTCTTTGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLAWQPG*TGLWPS
Trigger: TGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGCCAGAAGCGTGGCTTaGGGAACTGCAATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFARSVA*GTAMLP
Trigger: AGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGCGCAGCAACAGGCTTaGGAGGGTCCTGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLAQQQA*EGPGGS
Trigger: CGAGCCCCCAGGACCCTCCCAAGCCTGTTGCTGCGC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGGCCCACTCTTACTGTaGCCCTTCCCCTCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFGPLLL*PFPSLL
Trigger: TAGCAGAGAGGGGAAGGGCCACAGTAAGAGTGGGCC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGCCAATCCCATCGCTaGCTTTGTTCTGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGQSHR*LCSGSL
Trigger: CAGGCTCCCAGAACAAAGCCAGCGATGGGATTGGCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGGCCCACCTTCTCCCTaGCCAATCCCATCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVGPPSP*PIPSLA
Trigger: AGCCAGCGATGGGATTGGCCAGGGAGAAGGTGGGCC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTGGTGGGTTGTGGCTTaGCGTCTAGAGGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHWWVVA*RLEEPC
Trigger: ACAGGGCTCCTCTAGACGCCAAGCCACAACCCACCA...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGGGCCGCCCACCACTaGTGGGTTGTGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSGAAHH*WVVAWR
Trigger: ACGCCAAGCCACAACCCACCAGTGGTGGGCGGCCCC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTGGGTGTCCCGGCCTTaGCAAATGCACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFWVSRP*QMHRLL
Trigger: GAGAAGCCTGTGCATTTGCCAAGGCCGGGACACCCA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTGGCTCACTAGGCCCTaGGTGTCCCGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDWLTRP*VSRPWQ
Trigger: TTGCCAAGGCCGGGACACCCAGGGCCTAGTGAGCCA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTCACAGTGGATGGTTTaGGGTGCTTTGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPSQWMV*GALETG
Trigger: CCCTGTCTCCAAAGCACCCCAAACCATCCACTGTGA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCCTGTCCCGGTGGCTaGCCCCGCCCATGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSPCPGG*PRPWCL
Trigger: CAAACACCATGGGCGGGGCCAGCCACCGGGACAGGG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTAGAGCCCTGTCCCGGTaGCTGGCCCCGCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSRALSR*LAPPMV
Trigger: CACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTGGTTTCCCCTACGGTaGCAGTCACCGAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSWFPLR*QSPREP
Trigger: GGGCTCTCTCGGTGACTGCCACCGTAGGGGAAACCA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGGGCTGGGGATGGCTTaGTCACGTCTCTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDGLGMA*SRLCPR
Trigger: ACGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTTTACCGGTTACAACTaGGAAGGCATCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAFTGYN*EGIWKK
Trigger: CTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATGGGCTCAGGCTCACTaGCACTGCCGCTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQWAQAH*HCRSRA
Trigger: AGCCCGGGAGCGGCAGTGCCAGTGAGCCTGAGCCCA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGGGAGAGGAATCTCGTaGAGAAGAAGGGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFGRGIS*RRRVRG
Trigger: TCCTCGGACCCTTCTTCTTCACGAGATTCCTCTCCC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCGGGGAGACAAGCTATaGGTGGGGGAACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVRGDKL*VGEPGR
Trigger: CCTCCCAGGTTCCCCCACTCATAGCTTGTCTCCCCG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCGGGGAGACAAGCTATaGGTGGGGGAACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLRGDKL*VGEPGR
Trigger: CCTCCCAGGTTCCCCCACTCATAGCTTGTCTCCCCG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGAGACGGCACTCATCTaGGCTGCATGGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVETALI*AAWVLL
Trigger: CAGCAGCACCCATGCAGCTCAGATGAGTGCCGTCTC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACCCTCTGCTTTCTCTaGGCCTCTCACAACAGTCTA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHTLCFL*ASHNSL
Trigger: TAGACTGTTGTGAGAGGCTCAGAGAAAGCAGAGGGT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS-3UTR TCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTCTCCCCTGTCTCAATaGGGCTCCGAGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDSPLSQ*GSELCL
Trigger: CAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTAAAGCAGGCACACCCATTCTTATTTCCTCTCAATCCACGATGTTCTGTCAGACCTTCAGGCTGGCGGTaGGCGAGGGCGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: LKQAHPFLFPLNPRCSVRPSGWR*ARAPTG
Trigger: GCCAGTCGGCGCCCTCGCTCACCGCCAGCCTGAAGG...TCTGACAGAACATCGTGGATTGAGAGGAAATAAGAATGGGTGTGCCTGCTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR TCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACAAGGCTTGTAAACCATaGACTACCTCCCCGACAGAC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHKACKP*TTSPTD
Trigger: GTCTGTCGGGGAGGTAGTTCATGGTTTACAAGCCTT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCTGTTTCTGGTGTTTCTaGTGTCCCACTATCGTAGTT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWACFWCF*CPTIVV
Trigger: AACTACGATAGTGGGACAGCAGAAACACCAGAAACA...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGGCATCAGGTGGGGGTaGCTCATCCTTCTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVGIRWG*LILLRP
Trigger: TGGCCTGAGAAGGATGAGGCACCCCCACCTGATGCC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTCTTCTTGGATTTCTTaGTCCGCCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVSSWIS*SASPSG
Trigger: GCCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGA...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAACAAGACCGTGGAGAGTaGTGGGCCGGATGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQQDRGE*WAGCAR
Trigger: CCGGGCACATCCGGCCCAGCACTCTCCACGGTCTTG...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTGGGACTGCTCCCGCTaGACCTCCTCTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVWDCSR*TSSWVT
Trigger: GGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCA...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTCTCTGGGAAGCCGTCTaGTTTCTTCACCACCACCTT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGLWEAV*FLHHHL
Trigger: AAGGTGGTGGTGAAGAAAGCAGACGGCTTCCCAGAG...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCTCTGGGAAGCCGTCTaGTTTCTTCACCACCACCTT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERLWEAV*FLHHHL
Trigger: AAGGTGGTGGTGAAGAAAGCAGACGGCTTCCCAGAG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTAGCGGTGGCGCCTCCTaGATAGACGCTTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVSGGAS*IDALFS
Trigger: TGAAAACAAAGCGTCTATGCAGGAGGCGCCACCGCT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGACCATCCTGGAGGGTaGCAGGAGCGGGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSDHPGG*QERGPV
Trigger: GACGGGCCCCCGCTCCTGGCACCCTCCAGGATGGTC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCCCCCTTCCCAGAGATaGCCCTGTCGAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLPPSQR*PCRGSG
Trigger: GCCACTCCCTCGACAGGGGCATCTCTGGGAAGGGGG...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCTTTTTCCCACTGCTaGTGGGGAGAACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPSFSHC*WGELVA
Trigger: TGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCCATGGAGGGCTCTCTaGATGTGTCAGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDPWRAL*MCQPSQ
Trigger: CTGCGAGGGCTGACACATGCAGAGAGCCCTCCATGG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGCCCACCCGGCGCCCATaGTTTCTCCATGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQPTRRP*FLHGLG
Trigger: ACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGG...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGGGGCTTGTGGCTGCTaGTTTCACTGTGCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSGACGC*FHCAQQ
Trigger: TTGCTGCGCACAGTGAAAGCAGCAGCCACAAGCCCC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCAGGGACCGGTCGGGGTaGTTAGTCTTTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLRDRSG*LVFGGP
Trigger: GGGCCCTCCAAAGACTAAGCACCCCGACCGGTCCCT...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGAGCTTGTCGCCCTCTaGTGGAGCATAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGELVAL*WSIKCF
Trigger: GAAGCACTTTATGCTCCAGCAGAGGGCGACAAGCTC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCAGAAGAGGTGTCGCTaGTGGCTGCAGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVQKRCR*WLQRPL
Trigger: GAGAGGCCTCTGCAGCCAGCAGCGACACCTCTTCTG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTACTGTGCTCCCGCGCTaGACCCGAGCCGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSTVLPR*TRAAGT
Trigger: AGTACCCGCGGCTCGGGTGCAGCGCGGGAGCACAGT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCATCTGCGCTCCACTGTaGTCCCGCGCTGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLICAPL*SRAAPE
Trigger: CTCGGGTGCAGCGCGGGAGCACAGTGGAGCGCAGAT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTCTGCTTCTCCTTCCTCAAAGGTCCAGCACTGTGTAATCCTAAAGCAGGCACAGAGGTTGGACGTCTCTaGAGAGGCCGGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LCFSFLKGPALCNPKAGTEVGRL*RGRPGL
Trigger: CAGGCCTGGCCGGCCTCTGCAGAGACGTCCAACCTC...TGTGCCTGCTTTAGGATTACACAGTGCTGGACCTTTGAGGAAGGAGAAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTACCCTGTCCTTCTTTaGCATGGCCTTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLYPVLL*HGLLLL
Trigger: AAGCAGCAGAAGGCCATGCCAAAGAAGGACAGGGTA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCAAGGTAATCAGATCCTaGGCATCAGGTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFKVIRS*ASGGGA
Trigger: GGCACCCCCACCTGATGCCCAGGATCTGATTACCTT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGAGGAATCTCGGCTaGGAGAGGAATCTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLRNLG*ERNLVK
Trigger: CTTCACGAGATTCCTCTCCCAGCCGAGATTCCTCAG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCGGCTGATGTGGACTaGCAGAAGCTGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSADVD*QKLLRN
Trigger: ATTCCTCAGCAGCTTCTGCCAGTCCACATCAGCCGA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGACTTTCTTTCTTCTTaGATTTCTTGCTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWADFLSS*ISCSAS
Trigger: TGAGGCGGAGCAAGAAATCCAAGAAGAAAGAAAGTC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAAAACTTCGGCTGGTGTaGAGTAAAGGAGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTKLRLV*SKGEGC
Trigger: GCAGCCTTCTCCTTTACTCCACACCAGCCGAAGTTT...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACCTAGGGGAGCTGCTCTaGGAGGAATTAGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHLGELL*EELVPD
Trigger: ATCTGGTACTAATTCCTCCCAGAGCAGCTCCCCTAG...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGTGGGTTGCGGGGTTaGAGAGGGCGTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGGLRG*RGRPGQ
Trigger: CTGGCCCGGACGCCCTCTCCAACCCCGCAACCCACC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCACCTTCCGGGAGACTaGGCGTTTCAGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVHLPGD*AFQAAL
Trigger: CAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCAGGCTGCCCAGCGGTaGCGCCTCCTGCATAGACGC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSQAAQR*RLLHRR
Trigger: GCGTCTATGCAGGAGGCGCCACCGCTGGGCAGCCTG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTATCGGAGAAGCTCCTTaGCCTGGGAGGACTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSIGEAP*PGRTSP
Trigger: CGGAGAAGTCCTCCCAGGCCAAGGAGCTTCTCCGAT...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCAAAGCTCTCTTGCACTaGTGGTATCGTTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAKALLH*WYRSFS
Trigger: GGAAAAAGAACGATACCACCAGTGCAAGAGAGCTTT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCTCCTGGCAGTAGGATaGGGACCTTTCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLLLAVG*GPFLSL
Trigger: GAGGGACAGGAAAGGTCCCCATCCTACTGCCAGGAG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACTGCCCTCTCTCTGTTaGGGATTGCTTTCCATGACT +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTLPSLC*GLLSMT
Trigger: AGTCATGGAAAGCAATCCCCAACAGAGAGAGGGCAG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCAGTGGTGTGGTCTTaGTGTTTAGGGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHSVVWS*CLGELP
Trigger: GGGCAGCTCCCCTAAACACCAAGACCACACCACTGA...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTTGGGGTCAGTGGTGTaGTCTTGGTGTTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLGSVV*SWCLGE
Trigger: CTCCCCTAAACACCAAGACCACACCACTGACCCCAA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGCAGGTCAGAAGCTTaGGGTCAGTGGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGRSEA*GQWCGL
Trigger: AAGACCACACCACTGACCCCAAGCTTCTGACCTGCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTGGGAGCGGGCAGCGTaGCCTGGCCAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSWERAA*PGQVRA
Trigger: AGCCCTGACCTGGCCAGGCCACGCTGCCCGCTCCCA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGGGGAAGCTTCAGGTaGGAGCGGGCAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGGSFR*ERAAWP
Trigger: AGGCCACGCTGCCCGCTCCCACCTGAAGCTTCCCCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCAGAGAGGAGATTTTTaGAGTTGTCACTGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAQRGDF*SCHWFS
Trigger: CGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTGGTGGGTTGTGGCTTaGCGTCTAGAGGAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSWWVVA*RLEEPC
Trigger: ACAGGGCTCCTCTAGACGCCAAGCCACAACCCACCA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACTCCGTCGGTGGCTTCTaGGGACCGGGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDSVGGF*GPGPFP
Trigger: AGGGAAAGGGCCCGGTCCCCAGAAGCCACCGACGGA...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTGGTTTCAGGGAAGCTaGAGGAGCAGCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERWFQGS*RSSSET
Trigger: AGTCTCTGAGCTGCTCCTCCAGCTTCCCTGAAACCA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAATGCCCCCGGCGGCCTTaGCAGAAGAGGTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKCPRRP*QKRCRC
Trigger: GCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCA...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCCTGTTGCTGGGGGCTaGAAGCTCCAGCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLPVAGG*KLQHAP
Trigger: GGGGGCATGCTGGAGCTTCCAGCCCCCAGCAACAGG...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCTGTTGCTGGGGGCTaGAAGCTCCAGCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSPVAGG*KLQHAP
Trigger: GGGGGCATGCTGGAGCTTCCAGCCCCCAGCAACAGG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGGGGCGGTCAGTGTTTaGGGCTGGGGATGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVGAVSV*GWGWLG
Trigger: ACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCATTTCAGAATATTCTaGACTCCAGCTCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAHFRIF*TPAQCF
Trigger: GAAACACTGAGCTGGAGTTCAGAATATTCTGAAATG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCGAAGTAGGCCAGAACTaGGTTTATGTCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGEVGQN*VYVCCF
Trigger: AAAGCAACAGACATAAACTCAGTTCTGGCCTACTTC...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTTGCTCTCCCTCTGTTaGAATAGCCAGTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLLLSLC*NSQFGK
Trigger: CTTCCCAAACTGGCTATTTCAACAGAGGGAGAGCAA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGGGAGAGGAATCTCGTaGAGAAGAAGGGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLGRGIS*RRRVRG
Trigger: TCCTCGGACCCTTCTTCTTCACGAGATTCCTCTCCC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGGTTCTCCATTGATGTaGGTGATAAGATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLGSPLM*VIRSPA
Trigger: GGCTGGAGATCTTATCACTCACATCAATGGAGAACC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGAGGCTCTCACCCGATaGCAGGGATCTGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSEALTR*QGSVQA
Trigger: TGCTTGAACAGATCCCTGTCATCGGGTGAGAGCCTC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCTTGGAATTGCCCAGTaGGTGTCCCAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLLGIAQ*VSQKRG
Trigger: TCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACGCTGGCCTGCTTGTaGAGAGCATCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDTLACL*RASFSR
Trigger: CCTGCTGAAGGATGCTCTTCACAAGCAGGCCAGCGT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGAGACGGCACTCATCTaGGCTGCATGGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTETALI*AAWVLL
Trigger: CAGCAGCACCCATGCAGCTCAGATGAGTGCCGTCTC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCCTCCCCGGCAGGCTaGGCCTTCCTATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSPSPAG*AFLWSL
Trigger: CAGGGACCATAGGAAGGCTCAGCCTGCCGGGGAGGG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTGGGTCGGGGTGGTGTaGCTCCAGAGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSWVGVV*LQRQGG
Trigger: TCCACCCTGCCTCTGGAGTCACACCACCCCGACCCA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTACAAGGCCTTTTTGTaGGGGCTGCTACGCAAACTC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVYKAFL*GLLRKL
Trigger: GAGTTTGCGTAGCAGCCCTCACAAAAAGGCCTTGTA...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACATCTCCCCTGTCTCAATaGGGCTCCGAGCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTSPLSQ*GSELCL
Trigger: CAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGA...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATCCTTCAGGCTGGCGGTaGGCGAGGGCGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNPSGWR*ARAPTG
Trigger: GCCAGTCGGCGCCCTCGCTCACCGCCAGCCTGAAGG...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACAACAGCAAACATATCTaGCAGGGTGGAGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHNSKHI*QGGAAD
Trigger: ATCAGCAGCTCCACCCTGTCAGATATGTTTGCTGTT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTLVTAH*LLSFSG
Trigger: ACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSASACS*ICSQWR
Trigger: TCGCCACTGAGAACAGATGCAGGAACACGCCGATGC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTCTCCAGGGGATTCTaGCTGAGGAGTAAGGTAATC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLSRGF*LRSKVI
Trigger: GATTACCTTACTCCTCAGGCAGAATCCCCTGGAGAG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCAGTCCTGCCTGGCATaGCGGACTTCCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLQSCLA*RTSFFY
Trigger: GTAGAAGAAGGAAGTCCGGCATGCCAGGCAGGACTG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCAGCCTTCAGTCCTaGCTGGCATGCCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLSSLQS*LACRTS
Trigger: GGAAGTCCGGCATGCCAGGCAGGACTGAAGGCTGGA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACCCGCCGAGTTTGGGTaGAAGACCGTGGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTPAEFG*KTVESA
Trigger: AGCACTCTCCACGGTCTTGCACCCAAACTCGGCGGG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGGACAGTGGGATGTTaGCGGCGGACTTTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGTVGC*RRTFAF
Trigger: GAAGGCGAAAGTCCGCCGGCAACATCCCACTGTCCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACATGGTGGGCGGGGAGTaGATCTTGCTGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDMVGGE*ILLGKA
Trigger: AGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCAT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTGGGACTGCTCCCGCTaGACCTCCTCTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLWDCSR*TSSWVT
Trigger: GGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAATTCTCATCCAGGCTCTaGAGCGGCGCCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKFSSRL*SGASRW
Trigger: CCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAA...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTTCTCATCCAGGCTCTaGAGCGGCGCCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSFSSRL*SGASRW
Trigger: CCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCTCTGGGAAGCCGTCTaGTTTCTTCACCACCACCTT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFLWEAV*FLHHHL
Trigger: AAGGTGGTGGTGAAGAAAGCAGACGGCTTCCCAGAG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCATCCTTCAGCAGGCTaGCCAGCGGTGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSHPSAG*PAVAPP
Trigger: AGGAGGCGCCACCGCTGGGCAGCCTGCTGAAGGATG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTCTTTTTCCCACTGCTaGTGGGGAGAACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSFSHC*WGELVA
Trigger: TGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCGTTCTTTTTCCCACTaGTGCTGGGGAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHRSFSH*CWGELV
Trigger: CACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCGTTCTTTTTCCCACTaGTGCTGGGGAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFRSFSH*CWGELV
Trigger: CACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGGGGCTGTGGAGGTTCTaGCCCAGGCAGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQGLWRF*PRQVRS
Trigger: GCTTCTGACCTGCCTGGGGCAGAACCTCCACAGCCC...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGAGGGGGCGGAGGGATaGTGCTGGGATGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLEGAEG*CWDAFV
Trigger: TACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGAGGGACCGGTCGGGGTaGTTAGTCTTTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQRDRSG*LVFGGP
Trigger: GGGCCCTCCAAAGACTAAGCACCCCGACCGGTCCCT...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGAGTGGCAGGCTCTTTaGCCTTTGTGGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVEWQAL*PLWPRH
Trigger: GTGTCGGGGCCACAAAGGGCAAAGAGCCTGCCACTC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGGAGCCCTGTCAGTGTaGAGTGGGACAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLGALSV*SGTEGP
Trigger: TGGGCCCTCTGTCCCACTGCACACTGACAGGGCTCC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGGAGCCCTGTCAGTGTaGAGTGGGACAGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLGALSV*SGTEGP
Trigger: TGGGCCCTCTGTCCCACTGCACACTGACAGGGCTCC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTAACCGGTTCTCGCTATaGACAAAGGAAAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSNRFSL*TKERPA
Trigger: GGCCGGCCTTTCCTTTGTGCATAGCGAGAACCGGTT...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTAGGGGGACCGTTTCATaGCATTGGGCTTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSRGTVS*HWACLP
Trigger: AGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCT...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGATCGGAAAGAACTCTaGCCAGTGGCTGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVDRKEL*PVAEGD
Trigger: GTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGGTGTCGCTGCTGGCTaGAGAGGCCTCTCTAACTCC +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVGVAAG*RGLSNS
Trigger: GGAGTTAGAGAGGCCTCTGCAGCCAGCAGCGACACC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCCTCAAAGGTCCAGCACTGTGTAATCCTAAAGCAGGCACACCCATTCTTATTTGGCCCAGGGCCTGGCTaGGCATGCGCACGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSKVQHCVILKQAHPFLFGPGPG*ACARGW
Trigger: CCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCC...AAATAAGAATGGGTGTGCCTGCTTTAGGATTACACAGTGCTGGACCTTTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVNGLRH*GRNFLD
Trigger: GTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTACCCTGTCCTTCTTTaGCATGGCCTTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERYPVLL*HGLLLL
Trigger: AAGCAGCAGAAGGCCATGCCAAAGAAGGACAGGGTA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCAGTGTTTCTGTGGATaGCAAGGTGGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPQCFCG*QGGAFG
Trigger: ACCAAAAGCACCACCTTGCCATCCACAGAAACACTG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCAGCTCAGTGTTTCTGTaGATGGCAAGGTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPSSVFL*MARWCF
Trigger: AAAGCACCACCTTGCCATCCACAGAAACACTGAGCT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTCGGCTGATGTGGACTaGCAGAAGCTGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSADVD*QKLLRN
Trigger: ATTCCTCAGCAGCTTCTGCCAGTCCACATCAGCCGA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGCCTTCAGTCCTGCCTaGCATGCCGGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVAFSPA*HAGLPS
Trigger: AGAAGGAAGTCCGGCATGCCAGGCAGGACTGAAGGC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGTGGAGCGGTAGCTTaGTGTTGGAGACCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGGAVA*CWRPGR
Trigger: TCTCCCCGGTCTCCAACACCAAGCTACCGCTCCACC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGGGAGTGCATCTTGCTaGGAAAGGCTTGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLGSASC*ERLARS
Trigger: AGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCCCCTGTCGAGGGAGTaGCAGAGACCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLPLSRE*QRPSWR
Trigger: CCTCCAGGATGGTCTCTGCCACTCCCTCGACAGGGG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCATCGGAGAAGCTCCTTaGCCTGGGAGGACTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVIGEAP*PGRTSP
Trigger: CGGAGAAGTCCTCCCAGGCCAAGGAGCTTCTCCGAT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGGAGGTAATCGATGTTaGCCAGCTTGCTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPGGNRC*PACCLT
Trigger: AGTTAGACAGCAAGCTGGCCAACATCGATTACCTCC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCACCCGTGGGTCGGACTaGGTTCCCTGGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLTRGSD*VPWQAF
Trigger: GAATGCCTGCCAGGGAACCCAGTCCGACCCACGGGT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGAAGGCAGTTCTGTCTTaGAGGCCTGAGGTCCGGACA +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLKAVLS*RPEVRT
Trigger: TGTCCGGACCTCAGGCCTCCAAGACAGAACTGCCTT...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACCTCACGTCACCACTTaGGCTGGGGCTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTPHVTT*AGALCR
Trigger: TCTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACTGTGTATAGAAATCTaGGTGGGTCCTTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTLCIEI*VGPSHR
Trigger: TCTGTGGGAAGGACCCACCCAGATTTCTATACACAG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGCTGCAGAGACCGCCTaGCAAGAAGCGCTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLAAETA*QEALRA
Trigger: AGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGCTCTTTGCCCTTTGTaGCCCCGACACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHALCPL*PRHLVS
Trigger: AGAAACCAAGTGTCGGGGCCACAAAGGGCAAAGAGC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTGGCTCACTAGGCCCTaGGTGTCCCGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQWLTRP*VSRPWQ
Trigger: TTGCCAAGGCCGGGACACCCAGGGCCTAGTGAGCCA...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCACAGCGGACAGTTTCTaGTCCGCTGGCTCACTAGGC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVTADSF*SAGSLG
Trigger: GCCTAGTGAGCCAGCGGACCAGAAACTGTCCGCTGT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTGGTTTGGGGTGCTTTaGAGACAGGGTTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHWFGVL*RQGLLF
Trigger: GAAAAGCAAACCCTGTCTCCAAAGCACCCCAAACCA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGGCAATCTTTCACAGTaGATGGTTTGGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTGNLSQ*MVWGAL
Trigger: CAAAGCACCCCAAACCATCCACTGTGAAAGATTGCC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCTTGTCGCCCTCTGCTaGAGCATAAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVLVALC*SIKCFS
Trigger: ACTGAAGCACTTTATGCTCCAGCAGAGGGCGACAAG...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTGCCCCCGGCGGCCTTaGCAGAAGAGGTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSCPRRP*QKRCRC
Trigger: GCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCTGTTGCTGGGGGCTaGAAGCTCCAGCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSPVAGG*KLQHAP
Trigger: GGGGGCATGCTGGAGCTTCCAGCCCCCAGCAACAGG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGTGTTTGGGTCGGGGTaGTGTGACTCCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLVFGSG*CDSRGR
Trigger: CCTGCCTCTGGAGTCACACCACCCCGACCCAAACAC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCAGGGTCCTTCCCTTTaGTTTCCCCTACGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVQGPSL*FPLRWQ
Trigger: CTGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTAACTGGGAAGGCATCTaGAAGAAGGTCCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGNWEGI*KKVPSL
Trigger: CAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTT...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCAACTGGGAAGGCATCTaGAAGAAGGTCCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPNWEGI*KKVPSL
Trigger: CAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGGCATGCGCACGAGGTTaGACGTCTCTGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQACARG*TSLQRP
Trigger: CGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGC...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCACAGACTTGTCCCGATaGCTGAATGTAGGATTGGGT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPTDLSR*LNVGLG
Trigger: ACCCAATCCTACATTCAGCCATCGGGACAAGTCTGT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
3UTR CAA 72 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLV*KGSQDTVARSG
Trigger: TCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTTCAAGGAAGTATCGTaGGGTGATGAGGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLFKEVS*GDEALV
Trigger: CACCAGGGCCTCATCACCTCACGATACTTCCTTGAA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAAGAATCGATGCTGTTTaGCTTCATATGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTRIDAV*LHMHHL
Trigger: CAGGTGGTGCATATGAAGTCAAACAGCATCGATTCT...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCACTGGCAGAAGCTGCTaGGGAATCTCGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVTGRSC*GISAGR
Trigger: TCTCCCAGCCGAGATTCCTCAGCAGCTTCTGCCAGT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGGTTCTCCATTGATGTaGGTGATAAGATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERGSPLM*VIRSPA
Trigger: GGCTGGAGATCTTATCACTCACATCAATGGAGAACC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGCCTCACGATGTGTCTaGCGATGGTGGGCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSASRCV*RWWAGS
Trigger: ACTCCCCGCCCACCATCGTCAGACACATCGTGAGGC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGTTTTCAAAAGTACTTaGCCTTTCCACAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPVFKST*PFHSLR
Trigger: CCGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAAC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAACGCTGGCCTGCTTGTaGAGAGCATCCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTTLACL*RASFSR
Trigger: CCTGCTGAAGGATGCTCTTCACAAGCAGGCCAGCGT...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGAGACGGCACTCATCTaGGCTGCATGGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLETALI*AAWVLL
Trigger: CAGCAGCACCCATGCAGCTCAGATGAGTGCCGTCTC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGTCTGTCTTGGAGGCCTaGGGTCCGGACAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGSVLEA*GPDRRA
Trigger: TGCTCTCCTGTCCGGACCTCAGGCCTCCAAGACAGA...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTACAAGGCCTTTTTGTaGGGGCTGCTACGCAAACTC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFYKAFL*GLLRKL
Trigger: GAGTTTGCGTAGCAGCCCTCACAAAAAGGCCTTGTA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCACACAGTGCTGGTTTTaGAAGGTAGTCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPTQCWF*KVVKTQ
Trigger: CTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGATGTCAAGGCCTGGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SGTLWHSQADMLLGCQGLASACS*ICSQWR
Trigger: TCGCCACTGAGAACAGATGCAGGAACACGCCGATGC...CAGGCCTTGACATCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp AGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCAGTAAAGGAGAAGGCTaGTTGGCTAGCTTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SQDTVARSGRVSTVLPLGSKGEG*LASFLK
Trigger: TTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTTACT...GCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGATGTGCCCGGACCCTaGTGGGGAATTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSDVPGP*WGIGGT
Trigger: AGTGCCCCCAATTCCCCAGCAGGGTCCGGGCACATC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCAAGACCGTGGAGAGTaGTGGGCCGGATGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSQDRGE*WAGCAR
Trigger: CCGGGCACATCCGGCCCAGCACTCTCCACGGTCTTG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGCGCGATCTTGGAATTaGCCAGTGAGTGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLARSWN*PVSVPE
Trigger: TTCTGGGACACTCACTGGGCAATTCCAAGATCGCGC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTGGGACTGCTCCCGCTaGACCTCCTCTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSWDCSR*TSSWVT
Trigger: GGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGCGGGGGCTCCTGCTaGCCACCCGTGGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASGGGSC*PPVGRT
Trigger: AGTCCGACCCACGGGTGGGCAGCAGGAGCCCCCGCC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR GCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATGGGCTGGGGCTCTGTaGAGACTCTGGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGWAGAL*RLWGRQ
Trigger: CTGCCTTCCCCAGAGTCTGCACAGAGCCCCAGCCCA...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCGTTCTTTTTCCCACTaGTGCTGGGGAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSRSFSH*CWGELV
Trigger: CACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGAATTCCAGCTGAGTaGAGAGAGGAGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGIPAE*REELSL
Trigger: CAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTGCCTTTGTAGAGGCTaGTCCTTCCTTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFCLCRG*SFLSGS
Trigger: GGAACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGAGGGGGCGGAGGGATaGTGCTGGGATGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLEGAEG*CWDAFV
Trigger: TACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGGGGCTTGTGGCTGCTaGTTTCACTGTGCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLGACGC*FHCAQQ
Trigger: TTGCTGCGCACAGTGAAAGCAGCAGCCACAAGCCCC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGAGTGGCAGGCTCTTTaGCCTTTGTGGCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSEWQAL*PLWPRH
Trigger: GTGTCGGGGCCACAAAGGGCAAAGAGCCTGCCACTC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGGAGACAGGGTTTaGTTTTCACCAACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGFGDRV*FSPTAD
Trigger: GTCCGCTGTTGGTGAAAAGCAAACCCTGTCTCCAAA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTTTGGAGACAGGGTTTaGTTTTCACCAACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPFGDRV*FSPTAD
Trigger: GTCCGCTGTTGGTGAAAAGCAAACCCTGTCTCCAAA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTTTGGAGACAGGGTTTaGTTTTCACCAACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERFGDRV*FSPTAD
Trigger: GTCCGCTGTTGGTGAAAAGCAAACCCTGTCTCCAAA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGTGGATGGTTTGGGGTaGTTTGGAGACAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLVDGLG*FGDRVC
Trigger: GCAAACCCTGTCTCCAAAGCACCCCAAACCATCCAC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTGTTGTCTGTCTGTTTaGACAGGGTGGGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERCCLSV*TGWGNL
Trigger: AAGATTGCCCCACCCTGTGCAAACAGACAGACAACA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACAACCGGTTCTCGCTATaGACAAAGGAAAGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDNRFSL*TKERPA
Trigger: GGCCGGCCTTTCCTTTGTGCATAGCGAGAACCGGTT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACGCCATTGGGCTTGTCTaGCTCCGTCGGTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDAIGLV*LRRWLL
Trigger: CAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGC...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGCAGAAGAGGTGTCGCTaGTGGCTGCAGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQQKRCR*WLQRPL
Trigger: GAGAGGCCTCTGCAGCCAGCAGCGACACCTCTTCTG...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCTTTTTGTGAGGGCTaGTACGCAAACTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPPFCEG*YANSLS
Trigger: GGAAAGAGAGTTTGCGTAGCAGCCCTCACAAAAAGG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCTGAGCTGTAGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLLSCSL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCTACAGCTCAG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGCAAGGTGGTGCTTTTaGTTTTGTCCACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPARWCF*FCPQSL
Trigger: AAGACTCTGTGGACAAAACCAAAAGCACCACCTTGC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGTGGATGGCAAGGTaGTGCTTTTGGTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLWMAR*CFWFCP
Trigger: TGGACAAAACCAAAAGCACCACCTTGCCATCCACAG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTTTCCTGGCTCCTCATaGGGGTCTCCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLFPGSS*GSPGQE
Trigger: CTCCTGCCCTGGAGACCCCCATGAGGAGCCAGGAAA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTCCGAGGACAGGGAATaGGGAGACATTGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDSEDRE*GDIGLP
Trigger: GGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCAGGAGAAACTTCGGCTaGTGTGGAGTAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPRRNFG*CGVKEK
Trigger: CTTCTCCTTTACTCCACACCAGCCGAAGTTTCTCCT...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGAGGAGAAACTTCGGCTaGTGTGGAGTAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERRRNFG*CGVKEK
Trigger: CTTCTCCTTTACTCCACACCAGCCGAAGTTTCTCCT...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCTCTTCACCACCACCTTaGCCTTCAGCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVSSPPP*PSACRG
Trigger: ACCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGA...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTCACTCCCGGGTCCATaGGATTTCTGGTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDSLPGP*DFWWDS
Trigger: GGAATCCCACCAGAAATCCCATGGACCCGGGAGTGA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCCCTGTCGAGGGAGTaGCAGAGACCATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSPLSRE*QRPSWR
Trigger: CCTCCAGGATGGTCTCTGCCACTCCCTCGACAGGGG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACAAGGCAGTTCTGTCTTaGAGGCCTGAGGTCCGGACA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDKAVLS*RPEVRT
Trigger: TGTCCGGACCTCAGGCCTCCAAGACAGAACTGCCTT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCTCACGTCACCACTTaGGCTGGGGCTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSPHVTT*AGALCR
Trigger: TCTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGCTCGCTTCTGGCTGTaGGAGGGCCTCTTTCAGACG +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSARFWL*EGLFQT
Trigger: CGTCTGAAAGAGGCCCTCCCACAGCCAGAAGCGAGC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGGTTTTCGCAGTTTCTaGAAAGCACAGTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPGFRSF*KAQFHG
Trigger: TCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGGTTTTCGCAGTTTCTaGAAAGCACAGTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLGFRSF*KAQFHG
Trigger: TCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCCCATGCTTTCTCCATaGCCTGGGTCTGTGTATAGA +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHPMLSP*PGSVYR
Trigger: TCTATACACAGACCCAGGCCATGGAGAAAGCATGGG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGGGCCTCGCCTCACCTaGGCCATCTTTGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLGPRLT*AIFVVR
Trigger: ACGAACCACAAAGATGGCCCAGGTGAGGCGAGGCCC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGAGAGGAGTTGTCTCTaGGCGGGGGCCTCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSERSCL*AGASPH
Trigger: GTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGAAGCGCTTCGGGCTTaGGTTCCACGCCACGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSEALRA*VPRHAS
Trigger: TGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGCCAGAAGCGTGGCTTaGGGAACTGCAATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLARSVA*GTAMLP
Trigger: AGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCAGGCCGGGGCTTGTaGCTGCTGCTTTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSPGRGL*LLLSLC
Trigger: GCACAGTGAAAGCAGCAGCCACAAGCCCCGGCCTGG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCACCGAGGGACTGAGTaGCAGGCTCTTTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLHRGTE*QALCPL
Trigger: CAAAGGGCAAAGAGCCTGCCACTCAGTCCCTCGGTG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTTTGTTCTGGGAGCCTaGGGTAGCAGGAAACACATC +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFFVLGA*GSRKHI
Trigger: GATGTGTTTCCTGCTACCCCAGGCTCCCAGAACAAA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGCCAATCCCATCGCTaGCTTTGTTCTGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGQSHR*LCSGSL
Trigger: CAGGCTCCCAGAACAAAGCCAGCGATGGGATTGGCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCACAGCGGACAGTTTCTaGTCCGCTGGCTCACTAGGC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLTADSF*SAGSLG
Trigger: GCCTAGTGAGCCAGCGGACCAGAAACTGTCCGCTGT...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACATCTTTCACAGTGGATaGTTTGGGGTGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHIFHSG*FGVLWR
Trigger: TCTCCAAAGCACCCCAAACCATCCACTGTGAAAGAT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGCAATCTTTCACAGTaGATGGTTTGGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGNLSQ*MVWGAL
Trigger: CAAAGCACCCCAAACCATCCACTGTGAAAGATTGCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTTCCGGGAGGGCCGTaGATCGGAAAGAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLFPGGP*IGKNSA
Trigger: GGCAGAGTTCTTTCCGATCCACGGCCCTCCCGGAAA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACTGGTTTCCCCTACGGTaGCAGTCACCGAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDWFPLR*QSPREP
Trigger: GGGCTCTCTCGGTGACTGCCACCGTAGGGGAAACCA...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACGTTTGGGGCTGGGGATaGCTTGGTCACGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDVWGWG*LGHVSA
Trigger: GGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAAC...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCAAGCAATTCCACTTCTaGGAATCTATCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAKQFHF*ESIKLP
Trigger: AGGAAGTTTGATAGATTCCCAGAAGTGGAATTGCTT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS-3UTR CCA 90 bp CCTTCCTCAAAGGTCCAGCACTGTGTAATCCTAAAGCAGGCACACCCATTCTTAGCATGCGCACGAGGTTaGACGTCTCTGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PSSKVQHCVILKQAHPFLACARG*TSLQRP
Trigger: CGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGC...TAAGAATGGGTGTGCCTGCTTTAGGATTACACAGTGCTGGACCTTTGAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR TCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATTCCTTCTCTTCTGCTaGATTCTGAGTGATTCGATC +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTFLLFC*ILSDSI
Trigger: GATCGAATCACTCAGAATTCAGCAGAAGAGAAGGAA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGACGCTGCCGAGCCATGTaGGAAGCGGGTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGRCRAM*EAGSLD
Trigger: ATCCAGTGAACCCGCTTCTCACATGGCTCGGCAGCG...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTGGGGTAGTAGTGATTaGCACCTTATTCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERWGSSD*HLIPTL
Trigger: AAGAGTGGGAATAAGGTGTCAATCACTACTACCCCA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCCAGAAGAGGGGATGGTaGCCGCTGCGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASQKRGW*PLRGGG
Trigger: CCCACCTCCCCGCAGCGGTCACCATCCCCTCTTCTG...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCTTGGAATTGCCCAGTaGGTGTCCCAGAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVLGIAQ*VSQKRG
Trigger: TCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGGCCTGTTAAGGCCTTaGGGGGAACAAAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLGLLRP*GEQKRR
Trigger: CCGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTACAAGGCCTTTTTGTaGGGGCTGCTACGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLYKAFL*GLLRKL
Trigger: GAGTTTGCGTAGCAGCCCTCACAAAAAGGCCTTGTA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCCTTCAGGCTGGCGGTaGGCGAGGGCGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: LDMFYLMWWQFIQGVMFSPSGWR*ARAPTG
Trigger: GCCAGTCGGCGCCCTCGCTCACCGCCAGCCTGAAGG...GGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCAGAATCACTTCTGGTaGAATGTATTCAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPQNHFW*NVFRCA
Trigger: GGCACACCTGAATACATTGCACCAGAAGTGATTCTG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCTCTTCTTGGATTTCTTaGTCCGCCTCACCATCCGGC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVSSWIS*SASPSG
Trigger: GCCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGA...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGAGGGACAGTGGGATGTTaGCGGCGGACTTTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGGTVGC*RRTFAF
Trigger: GAAGGCGAAAGTCCGCCGGCAACATCCCACTGTCCC...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGGTGCTTCTTGTCACTaGCGTAAGAGGGCGACAGCT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVGASCH*RKRATA
Trigger: AGCTGTCGCCCTCTTACGGCAGTGACAAGAAGCACC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGGCACTCATCTGAGCTaGATGGGTGCTGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDGTHLS*MGAADK
Trigger: TTTGTCAGCAGCACCCATGCAGCTCAGATGAGTGCC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGGAATTCCAGCTGAGTaGAGAGAGGAGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSGIPAE*REELSL
Trigger: CAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGAGCTTGTCGCCCTCTaGTGGAGCATAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVELVAL*WSIKCF
Trigger: GAAGCACTTTATGCTCCAGCAGAGGGCGACAAGCTC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTCCTATGGTCCCTGTTaGTGGGGGCTGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSYGPC*WGLEAP
Trigger: TGGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCTATGGTCCCTGTTaGTGGGGGCTGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLSYGPC*WGLEAP
Trigger: TGGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AGCAGGCACACCCATTCTTATTTCCTCTCAATCCACGATGTTCTGTCAGAGAATGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: SRHTHSYFLSIHDVLSENGPGCA*ARGWTS
Trigger: AGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCC...ATTCTCTGACAGAACATCGTGGATTGAGAGGAAATAAGAATGGGTGTGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGAGGTGATGAGGCCCTaGTGGGATTTATCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSEVMRP*WDLSKQ
Trigger: TTGCTTGGATAAATCCCACCAGGGCCTCATCACCTC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTGTCCTTCTTTGGCATaGCCTTCTGCTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHCPSLA*PSAASN
Trigger: ATTGGAAGCAGCAGAAGGCCATGCCAAAGAAGGACA...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTTATTGAGTCCCAGTTaGCTAATGATGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLLLSPS*LMMYLG
Trigger: TCCCAGGTACATCATTAGCCAACTGGGACTCAATAA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGATCCTGGGCATCAGGTaGGGGTGCCTCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQILGIR*GCLILL
Trigger: GAGAAGGATGAGGCACCCCCACCTGATGCCCAGGAT...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGCAAGGTGGTGCTTTTaGTTTTGTCCACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPARWCF*FCPQSL
Trigger: AAGACTCTGTGGACAAAACCAAAAGCACCACCTTGC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGCAAGGTGGTGCTTTTaGTTTTGTCCACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGARWCF*FCPQSL
Trigger: AAGACTCTGTGGACAAAACCAAAAGCACCACCTTGC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCTGTGGATGGCAAGGTaGTGCTTTTGGTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFLWMAR*CFWFCP
Trigger: TGGACAAAACCAAAAGCACCACCTTGCCATCCACAG...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATAGCTCAGTGTTTCTGTaGATGGCAAGGTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHSSVFL*MARWCF
Trigger: AAAGCACCACCTTGCCATCCACAGAAACACTGAGCT...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTAAGGGCTGGCTTTCCTaGCTCCTCATGGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSKGWLS*LLMGVS
Trigger: GGAGACCCCCATGAGGAGCCAGGAAAGCCAGCCCTT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCACCTCAGGCTCCTCCTaGGCACACTCTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLTSGSS*AHSSGG
Trigger: TCCTCCTGAAGAGTGTGCCCAGGAGGAGCCTGAGGT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGAGAAGCGGGTTCACTaGATGGCTTTGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPEKRVH*MALRNY
Trigger: ATAATTCCTCAAAGCCATCCAGTGAACCCGCTTCTC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTAGCAAACATATCTCCTaGGATCATGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSKHIS*DHEGKS
Trigger: GCTCTTTCCCTCATGATCCCAGGAGATATGTTTGCT...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGACTTTCTTTCTTCTTaGATTTCTTGCTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLDFLSS*ISCSAS
Trigger: TGAGGCGGAGCAAGAAATCCAAGAAGAAAGAAAGTC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGCGGTAGCTTGGTGTTaGAGACCGGGGAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLAVAWC*RPGRQA
Trigger: AGCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCATGGGAAGTCAGGGGTaGAGCGGTAGCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVMGSQG*SGSLVL
Trigger: CAACACCAAGCTACCGCTCCACCCCTGACTTCCCAT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTCTTCACCACCACCTTaGCCTTCAGCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVSSPPP*PSACRG
Trigger: ACCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGA...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCATGGGATTTCTGGTaGGATTCCTGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLPWDFW*DSCFSG
Trigger: CCCAGAGAAACAGGAATCCCACCAGAAATCCCATGG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCACTCCCGGGTCCATaGGATTTCTGGTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLSLPGP*DFWWDS
Trigger: GGAATCCCACCAGAAATCCCATGGACCCGGGAGTGA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCAGAAGCTCCTTGGCCTaGGAGGACTTCTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLRSSLA*EDFSVP
Trigger: AGGCACGGAGAAGTCCTCCCAGGCCAAGGAGCTTCT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTAGAAGCTCCTTGGCCTaGGAGGACTTCTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSRSSLA*EDFSVP
Trigger: AGGCACGGAGAAGTCCTCCCAGGCCAAGGAGCTTCT...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCATCGGAGAAGCTCCTTaGCCTGGGAGGACTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLIGEAP*PGRTSP
Trigger: CGGAGAAGTCCTCCCAGGCCAAGGAGCTTCTCCGAT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAAGCCAGCTGTCATCTTaGGCTTCAGCACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTSQLSS*ASAQGR
Trigger: TCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCT...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGCTCTCTTGCACTGGTaGTATCGTTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHALLHW*YRSFSH
Trigger: GTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACAAAGCTCTCTTGCACTaGTGGTATCGTTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHKALLH*WYRSFS
Trigger: GGAAAAAGAACGATACCACCAGTGCAAGAGAGCTTT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACATCAGTGGTGTGGTCTTaGTGTTTAGGGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTSVVWS*CLGELP
Trigger: GGGCAGCTCCCCTAAACACCAAGACCACACCACTGA...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCAGAGAGGAGATTTTTaGAGTTGTCACTGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLQRGDF*SCHWFS
Trigger: CGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGCGGAGGGATGCTGCTaGGATGCCTTTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSAEGCC*DAFVEA
Trigger: AGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATGGCTTGGGAGGGTCCTaGGGGCTCGAGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNGLGGS*GLELGS
Trigger: AGAGCCCAGCTCGAGCCCCCAGGACCCTCCCAAGCC...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACATGTGGCCCCGACACTTaGTTTCTGAGAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTCGPDT*FLRGEG
Trigger: TCCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACA...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATCGCTGGCTTTGTTCTaGGAGCCTGGGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQSLALF*EPGVAG
Trigger: TCCTGCTACCCCAGGCTCCCAGAACAAAGCCAGCGA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTCGCTGGCTTTGTTCTaGGAGCCTGGGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSLALF*EPGVAG
Trigger: TCCTGCTACCCCAGGCTCCCAGAACAAAGCCAGCGA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGGGCCAATCCCATCGCTaGCTTTGTTCTGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQGQSHR*LCSGSL
Trigger: CAGGCTCCCAGAACAAAGCCAGCGATGGGATTGGCC...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCACCGTTTCATGCCATTaGGCTTGTCTGCCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVTVSCH*ACLPPS
Trigger: CGACGGAGGCAGACAAGCCCAATGGCATGAAACGGT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAACCGTTTCATGCCATTaGGCTTGTCTGCCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTTVSCH*ACLPPS
Trigger: CGACGGAGGCAGACAAGCCCAATGGCATGAAACGGT...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTTTCCGGGAGGGCCGTaGATCGGAAAGAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLFPGGP*IGKNSA
Trigger: GGCAGAGTTCTTTCCGATCCACGGCCCTCCCGGAAA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTCACTCTTTGTCATGTaGGTTCGGCCCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLSLFVM*VRPSPA
Trigger: TGCCGGGGAGGGCCGAACCCACATGACAAAGAGTGA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTGGTTTCCCCTACGGTaGCAGTCACCGAGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSWFPLR*QSPREP
Trigger: GGGCTCTCTCGGTGACTGCCACCGTAGGGGAAACCA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAACAGGGTCCTTCCCTTTaGTTTCCCCTACGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQQGPSL*FPLRWQ
Trigger: CTGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTG...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTCCCCCAAGAGAGTTTaGGTGCTAGATCAGTTATTT +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLSPKRV*VLDQLF
Trigger: AAATAACTGATCTAGCACCCAAACTCTCTTGGGGGA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGAACTTGGAGCATGTCTaGGAAGTACCCGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: WFIIIISWSQQAGERPGLNLEHV*EVPVPS
Trigger: GGACGGGACGGGTACTTCTCAGACATGCTCCAAGTT...CAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCAGACGTTCTTCCATCTaGGCTGTAGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCTACAGCTCAGATGGAAGAACGTCT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCGACACTTGGTTTCTaGGAGGAGAGGGACCGGTCG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSPTLGF*EERDRS
Trigger: CGACCGGTCCCTCTCCTCTCAGAAACCAAGTGTCGG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGAACGGAAGAATCGATaGTGTTTGACTTCATATGCA +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTERKNR*CLTSYA
Trigger: TGCATATGAAGTCAAACAGCATCGATTCTTCCGTTC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCAGTGCTCTGAAAAACTaGCAACTGACAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVSALKN*QLTGWS
Trigger: GCTCCACCCTGTCAGTTGGCAGTTTTTCAGAGCACT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTATGGTGGGCGGGGAGTaGATCTTGCTGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSMVGGE*ILLGKA
Trigger: AGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCAT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGGTGCTTCTTGTCACTaGCGTAAGAGGGCGACAGCT +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLGASCH*RKRATA
Trigger: AGCTGTCGCCCTCTTACGGCAGTGACAAGAAGCACC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGAGCAATGTCCAGAGTaGCCTCGATCGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSEQCPE*PRSASG
Trigger: GCCTGAAGCCGATCGAGGGCACTCTGGACATTGCTC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGGAATTCCAGCTGAGTaGAGAGAGGAGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDGIPAE*REELSL
Trigger: CAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTCAATTCCAGGTGGCTaGAGAGACCGCCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQSIPGG*RDRLAR
Trigger: TCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGA...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGGATGCTGCTGGGATaGCTTTGTAGAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGMLLG*LCRGCS
Trigger: GGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGGGCGGAGGGATGCTaGTGGGATGCCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGAEGC*WDAFVE
Trigger: CTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGTGTCGCTGCTGGCTaGAGAGGCCTCTCTAACTCC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGVAAG*RGLSNS
Trigger: GGAGTTAGAGAGGCCTCTGCAGCCAGCAGCGACACC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATCTTTCCCCCGCCTCTaGCGTACCACAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQSFPRL*RTTKSF
Trigger: GAAGGACTTTGTGGTACGGCAGAGGCGGGGGAAAGA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTCTTTCCCCCGCCTCTaGCGTACCACAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSFPRL*RTTKSF
Trigger: GAAGGACTTTGTGGTACGGCAGAGGCGGGGGAAAGA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCTTTTTGTGAGGGCTaGTACGCAAACTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLPFCEG*YANSLS
Trigger: GGAAAGAGAGTTTGCGTAGCAGCCCTCACAAAAAGG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCTCGGGTCCGCGATCTaGGCTCCACTGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASLGSAI*APLCSR
Trigger: GCGGGAGCACAGTGGAGCGCAGATCGCGGACCCGAG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCAGTCGGTTAAGTTATaGCTTTGTTTTCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPQSVKL*LCFQSG
Trigger: TCCACTCTGAAAACAAAGGCATAACTTAACCGACTG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATGGCGATGCTTTCGGTaGTACAGAAATGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTWRCFR*YRNVLI
Trigger: TATCAAAACATTTCTGTACCACCGAAAGCATCGCCA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGTGATGAGGCCCTGGTaGGATTTATCCAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSVMRPW*DLSKQS
Trigger: AGATTGCTTGGATAAATCCCACCAGGGCCTCATCAC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACAACCAACAAGTTGTCTaGTTTCAAATCCCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHNQQVV*FQIPVY
Trigger: GTACACAGGGATTTGAAACCAGACAACTTGTTGGTT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCCTCAGAATCACTTCTaGTGCAATGTATTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERPQNHF*CNVFRC
Trigger: ACACCTGAATACATTGCACCAGAAGTGATTCTGAGG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATAGTATCCCCAAAGAATaGCACGCATCCAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHSIPKE*HASNQK
Trigger: TTTCTGGTTGGATGCGTGCCATTCTTTGGGGATACT...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCGAGGACAGGGAATaGGGAGACATTGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLSEDRE*GDIGLP
Trigger: GGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACATCGGCTGATGTGGACTaGCAGAAGCTGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTSADVD*QKLLRN
Trigger: ATTCCTCAGCAGCTTCTGCCAGTCCACATCAGCCGA...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGAGCCTTCAGTCCTGCCTaGCATGCCGGACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGAFSPA*HAGLPS
Trigger: AGAAGGAAGTCCGGCATGCCAGGCAGGACTGAAGGC...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACAAACTTCGGCTGGTGTaGAGTAAAGGAGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDKLRLV*SKGEGC
Trigger: GCAGCCTTCTCCTTTACTCCACACCAGCCGAAGTTT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGAGCGGTAGCTTGGTGTTaGAGACCGGGGAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGAVAWC*RPGRQA
Trigger: AGCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGC...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTTGGGTGCAAGACCGTaGAGAGTGCTGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSLGARP*RVLGRM
Trigger: CATCCGGCCCAGCACTCTCCACGGTCTTGCACCCAA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCAGCCAGCTGTCATCTTaGGCTTCAGCACAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLSQLSS*ASAQGR
Trigger: TCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGCTCTCTTGCACTGGTaGTATCGTTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLALLHW*YRSFSH
Trigger: GTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGCAGGTCAGAAGCTTaGGGTCAGTGGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSGRSEA*GQWCGL
Trigger: AAGACCACACCACTGACCCCAAGCTTCTGACCTGCC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCTGTGTATAGAAATCTaGGTGGGTCCTTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSLCIEI*VGPSHR
Trigger: TCTGTGGGAAGGACCCACCCAGATTTCTATACACAG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGGCCTCGCCTCACCTaGGCCATCTTTGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGPRLT*AIFVVR
Trigger: ACGAACCACAAAGATGGCCCAGGTGAGGCGAGGCCC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGCTCTTTGCCCTTTGTaGCCCCGACACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLALCPL*PRHLVS
Trigger: AGAAACCAAGTGTCGGGGCCACAAAGGGCAAAGAGC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATATCTTTCACAGTGGATaGTTTGGGGTGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHIFHSG*FGVLWR
Trigger: TCTCCAAAGCACCCCAAACCATCCACTGTGAAAGAT...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGTGTTTGGGTCGGGGTaGTGTGACTCCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSVFGSG*CDSRGR
Trigger: CCTGCCTCTGGAGTCACACCACCCCGACCCAAACAC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCCCTGTCCCGGTGGCTaGCCCCGCCCATGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASPCPGG*PRPWCL
Trigger: CAAACACCATGGGCGGGGCCAGCCACCGGGACAGGG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTAGAGCCCTGTCCCGGTaGCTGGCCCCGCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: KRSGYEMCGATRCSRNECRALSR*LAPPMV
Trigger: CACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCT...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAAGTCAGTGTTTGGGGCTaGGGATGGCTTGGTCACGTC +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKVSVWG*GWLGHV
Trigger: GACGTGACCAAGCCATCCCCAGCCCCAAACACTGAC...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTTCGTCTTAGAATGCTaGACTCATCCATCTCACCCT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFFVLEC*THPSHP
Trigger: AGGGTGAGATGGATGAGTCCAGCATTCTAAGACGAA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS-3UTR CCA 90 bp TCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGATGTCAAGGCCTGAGACTCAGCTCCTTCTaGAGCCCTCTTCGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: SGTLWHSQADMLLGCQGLRLSSF*SPLRLR
Trigger: TCTAAGACGAAGAGGGCTCCAGAAGGAGCTGAGTCT...CAGGCCTTGACATCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCGAAGACGCGGGCTCCTaGGCTCAGGCTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASEDAGS*AQAHWH
Trigger: GTGCCAGTGAGCCTGAGCCCAGGAGCCCGCGTCTTC...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCCGCCACCGGGTTTaGAAGAAGGTACCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGSRHRV*KKVPPS
Trigger: ACTGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGA...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp ATCTCTGCTTCTCCTTCCTCAAAGGTCCAGCACTGTGTAATCCTAAAGCAGGCATCCCGCCACCGGGTTTaGAAGAAGGTACCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ISASPSSKVQHCVILKQASRHRV*KKVPPS
Trigger: ACTGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGA...TGCCTGCTTTAGGATTACACAGTGCTGGACCTTTGAGGAAGGAGAAGCAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR TCA 90 bp ATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAAAGCAAGGTTGGTATGGTAACTaGTGCAACTTCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IISWSQQAGERPGLQAKQGWYGN*CNFSWE
Trigger: CTCCCAGGAGAAGTTGCATCAGTTACCATACCAACC...TTGCTTTGCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp TATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTAGACGTTCTTCCATCTaGGCTGTAGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: YREVMRPWWDLSKQSRASRRSSI*AVAFGN
Trigger: GTTCCCAAAGGCTACAGCTCAGATGGAAGAACGTCT...ACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp AATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGATTCAAGGAAGTATCGTaGGGTGATGAGGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: NCNPSGTLWHSQADMLLGFKEVS*GDEALV
Trigger: CACCAGGGCCTCATCACCTCACGATACTTCCTTGAA...TCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTCTTCTGCTGAATTCTaGGTGATTCGATCTATACTG +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERSSAEF*VIRSIL
Trigger: CAGTATAGATCGAATCACTCAGAATTCAGCAGAAGA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTGGATCACAATCGGCTaGTGTGGACTGGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLWITIG*CGLAEA
Trigger: AGCTTCTGCCAGTCCACATCAGCCGATTGTGATCCA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTGGGGTAGTAGTGATTaGCACCTTATTCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSWGSSD*HLIPTL
Trigger: AAGAGTGGGAATAAGGTGTCAATCACTACTACCCCA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTCGGACTGCACGCGCTTaGGCAGCGGGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSRTARA*AAGTWG
Trigger: CCCCCAGGTCCCCGCTGCTCAAGCGCGTGCAGTCCG...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTGTTTCTGGTGTTTCTaGTGTCCCACTATCGTAGTT +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFCFWCF*CPTIVV
Trigger: AACTACGATAGTGGGACAGCAGAAACACCAGAAACA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCTGTTTGACTTCATATaGACCACCTGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDLFDFI*TTCSQP
Trigger: AGGCTGGGAACAGGTGGTGCATATGAAGTCAAACAG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGTGTGGACAAGTCCATaGACTGGTTCTCCATTGATG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDVWTSP*TGSPLM
Trigger: CATCAATGGAGAACCAGTGCATGGACTTGTCCACAC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAAGCGCGATCTTGGAATTaGCCAGTGAGTGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQARSWN*PVSVPE
Trigger: TTCTGGGACACTCACTGGGCAATTCCAAGATCGCGC...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAAGGTGCTTCTTGTCACTaGCGTAAGAGGGCGACAGCT +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKGASCH*RKRATA
Trigger: AGCTGTCGCCCTCTTACGGCAGTGACAAGAAGCACC...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCAGCGGTGGCGCCTCCTaGATAGACGCTTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLSGGAS*IDALFS
Trigger: TGAAAACAAAGCGTCTATGCAGGAGGCGCCACCGCT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGGGCGGGGGCTCCTGCTaGCCACCCGTGGGTCGGACT +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKGGGSC*PPVGRT
Trigger: AGTCCGACCCACGGGTGGGCAGCAGGAGCCCCCGCC...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGGCACTCATCTGAGCTaGATGGGTGCTGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLGTHLS*MGAADK
Trigger: TTTGTCAGCAGCACCCATGCAGCTCAGATGAGTGCC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATGAGGTTGGACGTCTCTaGAGAGGCCGGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHEVGRL*RGRPGL
Trigger: CAGGCCTGGCCGGCCTCTGCAGAGACGTCCAACCTC...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHGPGCA*ARGWTS
Trigger: AGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCC...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCGGCCCAGGGCCTGGCTaGGCATGCGCACGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLGPGPG*ACARGW
Trigger: CCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCC...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp TTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTGTGGCTCTTCGGAGGCTaGCCTTCCAGGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: FYLMWWQFIQGVMFSQHLWLFGG*PSRLAV
Trigger: CACCGCCAGCCTGGAAGGGCAGCCTCCGAAGAGCCA...CAAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS-3UTR CCA 90 bp CATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: HHNYFMVTAGGRTSRAASNGLRH*GRNFLD
Trigger: GTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATT...GCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGTGATGAGGCCCTGGTaGGATTTATCCAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVVMRPW*DLSKQS
Trigger: AGATTGCTTGGATAAATCCCACCAGGGCCTCATCAC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp ATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAAAGCAAGAGGTGATGAGGCCCTaGTGGGATTTATCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: IISWSQQAGERPGLQAKQEVMRP*WDLSKQ
Trigger: TTGCTTGGATAAATCCCACCAGGGCCTCATCACCTC...TTGCTTTGCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGAACCAACAAGTTGTCTaGTTTCAAATCCCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERNQQVV*FQIPVY
Trigger: GTACACAGGGATTTGAAACCAGACAACTTGTTGGTT...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTAAGGTAATCAGATCCTaGGCATCAGGTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSKVIRS*ASGGGA
Trigger: GGCACCCCCACCTGATGCCCAGGATCTGATTACCTT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGAGCAAACATATCTCCTaGGATCATGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLSKHIS*DHEGKS
Trigger: GCTCTTTCCCTCATGATCCCAGGAGATATGTTTGCT...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTGAGGAATCTCGGCTaGGAGAGGAATCTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSLRNLG*ERNLVK
Trigger: CTTCACGAGATTCCTCTCCCAGCCGAGATTCCTCAG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCTGAGGAATCTCGGCTaGGAGAGGAATCTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLLRNLG*ERNLVK
Trigger: CTTCACGAGATTCCTCTCCCAGCCGAGATTCCTCAG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGGAGTGCATCTTGCTaGGAAAGGCTTGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGSASC*ERLARS
Trigger: AGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGCTCTGTGCAGACTCTaGGGAAGGCAGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLALCRL*GRQFCL
Trigger: AAGACAGAACTGCCTTCCCCAGAGTCTGCACAGAGC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGCTCTGTGCAGACTCTaGGGAAGGCAGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSALCRL*GRQFCL
Trigger: AAGACAGAACTGCCTTCCCCAGAGTCTGCACAGAGC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTTTTCCCACTGCTGCTaGGGAGAACTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSFSHCC*GELVAQ
Trigger: CTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACTGCCCTCTCTCTGTTaGGGATTGCTTTCCATGACT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTLPSLC*GLLSMT
Trigger: AGTCATGGAAAGCAATCCCCAACAGAGAGAGGGCAG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTTGGGGTCAGTGGTGTaGTCTTGGTGTTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSLGSVV*SWCLGE
Trigger: CTCCCCTAAACACCAAGACCACACCACTGACCCCAA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCAGAGAGGAGATTTTTaGAGTTGTCACTGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHQRGDF*SCHWFS
Trigger: CGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCACTCTCAATTCCAGGTaGCTGCAGAGACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSTLNSR*LQRPPG
Trigger: GCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGT...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGCGGAGGGATGCTGCTaGGATGCCTTTGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSAEGCC*DAFVEA
Trigger: AGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTTGTTCTGGGAGCCTaGGGTAGCAGGAAACACATC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLFVLGA*GSRKHI
Trigger: GATGTGTTTCCTGCTACCCCAGGCTCCCAGAACAAA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACTGGTTTGGGGTGCTTTaGAGACAGGGTTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDWFGVL*RQGLLF
Trigger: GAAAAGCAAACCCTGTCTCCAAAGCACCCCAAACCA...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCACAGTGGATGGTTTaGGGTGCTTTGGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLSQWMV*GALETG
Trigger: CCCTGTCTCCAAAGCACCCCAAACCATCCACTGTGA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAAAAGAACTCTGCCCAGTaGCTGAGGGGGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKKNSAQ*LRGTVS
Trigger: TGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTT...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGTGGTTTCAGGGAAGCTaGAGGAGCAGCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGWFQGS*RSSSET
Trigger: AGTCTCTGAGCTGCTCCTCCAGCTTCCCTGAAACCA...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGCGGGGCACCGGCTCTaGCGCCTCCGAAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASAGHRL*RLRNFL
Trigger: GAGAAAGTTTCGGAGGCGCCAGAGCCGGTGCCCCGC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGCCAGAAGCCACATCTaGGTTGCTGCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVARSHI*VAAFPK
Trigger: TTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCAGTGTCCATTGGGATaGCCGTGTAATGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDQCPLG*PCNENG
Trigger: GCCATTTTCATTACACGGCCATCCCAATGGACACTG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGCCTTTTAGACAGTTaGACCAGGGATCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSGLLDS*TRDPVS
Trigger: GGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTATAGTGATGGGGAATaGCTAAAACCATATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLYSDGE*LKPYGK
Trigger: TTTCCCATATGGTTTTAGCCATTCCCCATCACTATA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGGTTGGTATGGTAACTaGTGCAACTTCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLGWYGN*CNFSWE
Trigger: CTCCCAGGAGAAGTTGCATCAGTTACCATACCAACC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACGTTTTCAAAAGTACTTaGCCTTTCCACAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDVFKST*PFHSLR
Trigger: CCGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAAC...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTGAGCCACCGAGGGACTaGGTGGCAGGCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KRSGYEMCGATRCSRNECEPPRD*VAGSLP
Trigger: GGGCAAAGAGCCTGCCACTCAGTCCCTCGGTGGCTC...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp AATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGAACCCTCTGCTTTCTCTaGGCCTCTCACAACAGTCTA +
Preference number: 4 (lower is better)
Translates to: NCNPSGTLWHSQADMLLGTLCFL*ASHNSL
Trigger: TAGACTGTTGTGAGAGGCTCAGAGAAAGCAGAGGGT...TCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp AATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGACTGGCATTCTCAGGCTaGCATGCTTCTAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: NCNPSGTLWHSQADMLLGLAFSG*HASRMS
Trigger: TGACATCCTAGAAGCATGTCAGCCTGAGAATGCCAG...TCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGCAATGCTGGTGACTaGCCATTGCCTATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGNAGD*PLPIKL
Trigger: AAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GTAGACATGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VDMVHHNYFMVTAGGRTSASACS*ICSQWR
Trigger: TCGCCACTGAGAACAGATGCAGGAACACGCCGATGC...GGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCATGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACATTCATGGCAAACCTCTaGCGGGATTCTTTATGCCGA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTFMANL*RDSLCR
Trigger: TCGGCATAAAGAATCCCGGCAGAGGTTTGCCATGAA...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACTGTTTGACTTCATATaGACCACCTGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTLFDFI*TTCSQP
Trigger: AGGCTGGGAACAGGTGGTGCATATGAAGTCAAACAG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGTGTGGACAAGTCCATaGACTGGTTCTCCATTGATG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLVWTSP*TGSPLM
Trigger: CATCAATGGAGAACCAGTGCATGGACTTGTCCACAC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGCGCGATCTTGGAATTaGCCAGTGAGTGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSARSWN*PVSVPE
Trigger: TTCTGGGACACTCACTGGGCAATTCCAAGATCGCGC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAAAGCGGTGGCGCCTCCTaGATAGACGCTTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKSGGAS*IDALFS
Trigger: TGAAAACAAAGCGTCTATGCAGGAGGCGCCACCGCT...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGCACTCATCTGAGCTaGATGGGTGCTGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGTHLS*MGAADK
Trigger: TTTGTCAGCAGCACCCATGCAGCTCAGATGAGTGCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATGCCTTTGTAGAGGCTaGTCCTTCCTTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQCLCRG*SFLSGS
Trigger: GGAACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCCTTTTTGTGAGGGCTaGTACGCAAACTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLPFCEG*YANSLS
Trigger: GGAAAGAGAGTTTGCGTAGCAGCCCTCACAAAAAGG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTCTGTCTGGCCCAAAGTaGCTCCCGAGCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSLSGPK*LPSGGG
Trigger: GCCCCCGCCGCTCGGGAGGCACTTTGGGCCAGACAG...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCAAGCCACATCTGGGTTaGTGCATTTCCGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLKPHLG*CISETA
Trigger: TGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp ACCCTACGCAGCTGGAAGAAGAGTAGATACCCTCCACAGGACCAAGTATACAAGAAGCCACATCTGGGTTaGTGCATTTCCGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: TLRSWKKSRYPPQDQVYKKPHLG*CISETA
Trigger: TGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTT...CTTGTATACTTGGTCCTGTGGAGGGTATCTACTCTTCTTCCAGCTGCGTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR GCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACATCGATATGCTACGATaGCAAAATCCACCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDIDMLR*QNPPPV
Trigger: AACTGGGGGTGGATTTTGGCATCGTAGCATATCGAT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGGAGGTGATGAGGCCCTaGTGGGATTTATCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQEVMRP*WDLSKQ
Trigger: TTGCTTGGATAAATCCCACCAGGGCCTCATCACCTC...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCAAACTTCGGCTGGTGTaGAGTAAAGGAGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLKLRLV*SKGEGC
Trigger: GCAGCCTTCTCCTTTACTCCACACCAGCCGAAGTTT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGCTAGGGGAGCTGCTCTaGGAGGAATTAGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGLGELL*EELVPD
Trigger: ATCTGGTACTAATTCCTCCCAGAGCAGCTCCCCTAG...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCCATGGGATTTCTGGTaGGATTCCTGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDPWDFW*DSCFSG
Trigger: CCCAGAGAAACAGGAATCCCACCAGAAATCCCATGG...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCATGGGATTTCTGGTaGGATTCCTGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSPWDFW*DSCFSG
Trigger: CCCAGAGAAACAGGAATCCCACCAGAAATCCCATGG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTTGGCAGAGACCATCCTaGAGGGTGCCAGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KRSGYEMCGATRCSRNECWQRPS*RVPGAG
Trigger: CCCCGCTCCTGGCACCCTCCAGGATGGTCTCTGCCA...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGCTGCCCTCTCTCTGTTaGGGATTGCTTTCCATGACT +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGLPSLC*GLLSMT
Trigger: AGTCATGGAAAGCAATCCCCAACAGAGAGAGGGCAG...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTTTTGGAGTTGTCACTaGTTTTCGCAGTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFFWSCH*FSQFLE
Trigger: TTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCCCATGCTTTCTCCATaGCCTGGGTCTGTGTATAGA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLPMLSP*PGSVYR
Trigger: TCTATACACAGACCCAGGCCATGGAGAAAGCATGGG...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGAAGCGCTTCGGGCTTaGGTTCCACGCCACGCCTCA +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASEALRA*VPRHAS
Trigger: TGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGCTGCAGAGACCGCCTaGCAAGAAGCGCTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASAAETA*QEALRA
Trigger: AGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCAAGAACTCTGCCCAGTaGCTGAGGGGGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSKNSAQ*LRGTVS
Trigger: TGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTT...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTAGACTCAGCTCCTTCTaGAGCCCTCTTCGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSRLSSF*SPLRLR
Trigger: TCTAAGACGAAGAGGGCTCCAGAAGGAGCTGAGTCT...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGGATCCAGTGTCCATTaGGATGGCCGTGTAATGAAA +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLGSSVH*DGRVMK
Trigger: TTTCATTACACGGCCATCCCAATGGACACTGGATCC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp AGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGGGGTTCAAGGCCATATaGCTAAAATGGGGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: RPWWDLSKQSRASSIIWWGFKAI*LKWGEV
Trigger: TACCTCTCCCCATTTTAGTCATATGGCCTTGAACCC...CCACCAGATTATTGAACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp AATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATTCAAGGAAGTATCGTaGGGTGATGAGGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: NSRKYREVMRPWWDLSKQFKEVS*GDEALV
Trigger: CACCAGGGCCTCATCACCTCACGATACTTCCTTGAA...TTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAACAATTCTCCACTTTCTaGACGATCATGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQQFSTF*TIMSLL
Trigger: CAGGAGGCTCATGATCGTTCAGAAAGTGGAGAATTG...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp AATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGACAATTCTCCACTTTCTaGACGATCATGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NCNPSGTLWHSQADMLLGQFSTF*TIMSLL
Trigger: CAGGAGGCTCATGATCGTTCAGAAAGTGGAGAATTG...TCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGATTAGAGCTACTCACTaGTTCATCTGTTTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLIRATH*FICFWC
Trigger: ACACCAGAAACAGATGAATCAGTGAGTAGCTCTAAT...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTCTTCTGCTGAATTCTaGGTGATTCGATCTATACTG +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSSSAEF*VIRSIL
Trigger: CAGTATAGATCGAATCACTCAGAATTCAGCAGAAGA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCACTGGCAGAAGCTGCTaGGGAATCTCGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASTGRSC*GISAGR
Trigger: TCTCCCAGCCGAGATTCCTCAGCAGCTTCTGCCAGT...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGTTCTCCATTGATGTaGGTGATAAGATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSGSPLM*VIRSPA
Trigger: GGCTGGAGATCTTATCACTCACATCAATGGAGAACC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGGGTAGTAGTGATTaGCACCTTATTCCCACTCTT +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLWGSSD*HLIPTL
Trigger: AAGAGTGGGAATAAGGTGTCAATCACTACTACCCCA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGTTTTCAAAAGTACTTaGCCTTTCCACAGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLVFKST*PFHSLR
Trigger: CCGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAAC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCCGACACTTGGTTTCTaGGAGGAGAGGGACCGGTCG +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASPTLGF*EERDRS
Trigger: CGACCGGTCCCTCTCCTCTCAGAAACCAAGTGTCGG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR TCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAACACAGTGCTGGTTTTaGAAGGTAGTCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTTQCWF*KVVKTQ
Trigger: CTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGT...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTCTCCGACAGAGTTTCTaGGCCCGAGGAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: KRSGYEMCGATRCSRNECLRQSF*ARGGLG
Trigger: GCCGAGTCCTCCTCGGGCTCAGAAACTCTGTCGGAG...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAGAACTCCTGACCTCGTaGTCCACTCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIAELLTS*STHLGL
Trigger: GAGGCCGAGGTGAGTGGATCACGAGGTCAGGAGTTC...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLLVTAH*LLSFSG
Trigger: ACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp ATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAAAGCAATGTTCTCAGTGGCGATaGTTTCGGTGGTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: IISWSQQAGERPGLQAKQCSQWR*FRWYRN
Trigger: ATTTCTGTACCACCGAAAGCATCGCCACTGAGAACA...TTGCTTTGCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCAGAATCACTTCTGGTaGAATGTATTCAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLQNHFW*NVFRCA
Trigger: GGCACACCTGAATACATTGCACCAGAAGTGATTCTG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCAGGAGAAAGCTCTCTTaGACTGGTGGTATCGTTCTT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVRRKLS*TGGIVL
Trigger: AAGAACGATACCACCAGTGCAAGAGAGCTTTCTCCT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATGTTGTCTGTCTGTTTaGACAGGGTGGGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQCCLSV*TGWGNL
Trigger: AAGATTGCCCCACCCTGTGCAAACAGACAGACAACA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTGTTGTCTGTCTGTTTaGACAGGGTGGGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSCCLSV*TGWGNL
Trigger: AAGATTGCCCCACCCTGTGCAAACAGACAGACAACA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCGATCGGAAAGAACTCTaGCCAGTGGCTGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASDRKEL*PVAEGD
Trigger: GTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATC...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGATGTCAAGGCCTGTCTATGAGGCGACAGTaGATAAGCAAAGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SGTLWHSQADMLLGCQGLSMRRQ*ISKVKG
Trigger: ACCTTTGACTTTGCTTATGCACTGTCGCCTCATAGA...CAGGCCTTGACATCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTGCATCTGTTCTCAGTaGCGATGCTTTCGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSCICSQ*RCFRWY
Trigger: GTACCACCGAAAGCATCGCCACTGAGAACAGATGCA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATCTTGCATCTGTTCTCAGTaGCGATGCTTTCGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SRKYREVMRPWWDLSKQSCICSQ*RCFRWY
Trigger: GTACCACCGAAAGCATCGCCACTGAGAACAGATGCA...AGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCTGAGCTGTAGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLLSCSL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCTACAGCTCAG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCAGTATCCCCAAAGAATaGCACGCATCCAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLSIPKE*HASNQK
Trigger: TTTCTGGTTGGATGCGTGCCATTCTTTGGGGATACT...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCTGTGGATGGCAAGGTaGTGCTTTTGGTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLLWMAR*CFWFCP
Trigger: TGGACAAAACCAAAAGCACCACCTTGCCATCCACAG...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCAGTGTTTCTGTGGATaGCAAGGTGGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLQCFCG*QGGAFG
Trigger: ACCAAAAGCACCACCTTGCCATCCACAGAAACACTG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGACAAGTCCATGCACTaGTTCTCCATTGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTDKSMH*FSIDVS
Trigger: ACTCACATCAATGGAGAACCAGTGCATGGACTTGTC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTGCTGCCCGCCGAGTTTaGGTGCAAGACCGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: KRSGYEMCGATRCSRNECAARRV*VQDRGE
Trigger: CTCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGC...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGAGGTAATCGATGTTaGCCAGCTTGCTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSGGNRC*PACCLT
Trigger: AGTTAGACAGCAAGCTGGCCAACATCGATTACCTCC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTTTTGGAGTTGTCACTaGTTTTCGCAGTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSFWSCH*FSQFLE
Trigger: TTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGCTGTGTATAGAAATCTaGGTGGGTCCTTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQLCIEI*VGPSHR
Trigger: TCTGTGGGAAGGACCCACCCAGATTTCTATACACAG...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCCATGCTTTCTCCATaGCCTGGGTCTGTGTATAGA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSPMLSP*PGSVYR
Trigger: TCTATACACAGACCCAGGCCATGGAGAAAGCATGGG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTGGTTTGGGGTGCTTTaGAGACAGGGTTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLWFGVL*RQGLLF
Trigger: GAAAAGCAAACCCTGTCTCCAAAGCACCCCAAACCA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCAACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YVLFNVVAIHPRGDVLPATAWAG*GWTQAP
Trigger: AGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGT...TGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGCTCCGAGCTCTGCCTaGCGGACATTCCCACACAGT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASAPSSA*RTFPHS
Trigger: ACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCCCCATTTCCCTGTCTaGCCCAAAGTGCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASPHFPV*PKVPPE
Trigger: CTCGGGAGGCACTTTGGGCCAGACAGGGAAATGGGG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGGCGGCTGATGCTCTCTaGAGAAGCCGCCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKAADAL*RSRRAP
Trigger: GGGAGCCCGGCGGCTTCTCCAGAGAGCATCAGCCGC...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGAGGGGATAATATGTaGTCAAGCTCCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGGDNM*SSSSSC
Trigger: GCAGGACGAGGAGCTTGACCACATATTATCCCCTCC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCACAGAAAGGAACAACTaGCCTTTTAGACAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVTERNN*PFRQLD
Trigger: GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTTGCTCTCCCTCTGTTaGAATAGCCAGTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSLLSLC*NSQFGK
Trigger: CTTCCCAAACTGGCTATTTCAACAGAGGGAGAGCAA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATGAGGCTCTCACCCGATaGCAGGGATCTGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNEALTR*QGSVQA
Trigger: TGCTTGAACAGATCCCTGTCATCGGGTGAGAGCCTC...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp CCCTACGCAGCTGGAAGAAGAGTAGATACCCTCCACAGGACCAAGTATACAAGCTCTTTTATACTTCAGTaGTTTTCCAGGGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PYAAGRRVDTLHRTKYTSSFILQ*FSRARS
Trigger: GCTTCTGGCCCTGGAAAATCACTGAAGTATAAAAGA...GCTTGTATACTTGGTCCTGTGGAGGGTATCTACTCTTCTTCCAGCTGCGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR TCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTGTAGGATTGGGTTATaGCAACTGCCAAACACAGAT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVCRIGL*QLPNTD
Trigger: ATCTGTGTTTGGCAGTTGTCATAACCCAATCCTACA...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACAGAATTTCTACCAGCTaGTTGGAGAGGTTTACAACA +
Preference number: 4 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDRISTS*LERFTT
Trigger: TGTTGTAAACCTCTCCAATCAGCTGGTAGAAATTCT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATCTGGCGATGTCGGGCTaGGTTGAAATGGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHLAMSG*VEMALR
Trigger: CCGAAGAGCCATTTCAACTCAGCCCGACATCGCCAG...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS-3UTR GCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCTCTTCGTCTTAGAATaGTGGACTCATCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLLFVLE*WTHPSH
Trigger: GTGAGATGGATGAGTCCAGCATTCTAAGACGAAGAG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS-3UTR GCA 90 bp AGCAGGCACACCCATTCTTATTTCCTCTCAATCCACGATGTTCTGTCAGAGAATCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGG +
Preference number: 4 (lower is better)
Translates to: SRHTHSYFLSIHDVLSENPHLGC*ISETAW
Trigger: CCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGG...ATTCTCTGACAGAACATCGTGGATTGAGAGGAAATAAGAATGGGTGTGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR GCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKGPGCA*ARGWTS
Trigger: AGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCC...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGACAAGAGCAGGGCTGGTaGAGGACTACTACAAAATGT +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGQEQGW*RTTTKC
Trigger: ACATTTTGTAGTAGTCCTGCACCAGCCCTGCTCTTG...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GTAGACATGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCGAGAACGTCCAGGGCTaGAAGCAAAGCAAATTACCC +
Preference number: 4 (lower is better)
Translates to: VDMVHHNYFMVTAGGRTSENVQG*KQSKLP
Trigger: GGGTAATTTGCTTTGCTTGCAGCCCTGGACGTTCTC...GGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCATGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR GCA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATAGCGATCTCGGTTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQDPFYGYFLQIATSPQIAISVH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAACCGAGATCGC...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGGGGAGAAATTTCTTaGACTATCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGGEIS*TILRAI
Trigger: AATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSNGLRH*GRNFLD
Trigger: GTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATT...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATCTGTGATGAGGCCCTGGTaGGATTTATCCAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: SRKYREVMRPWWDLSKQSVMRPW*DLSKQS
Trigger: AGATTGCTTGGATAAATCCCACCAGGGCCTCATCAC...AGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCAGCAAAGTACATTCTaGCCATATCAACAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLQQSTF*PYQQGE
Trigger: CTCTCCCTGTTGATATGGCCAGAATGTACTTTGCTG...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCAGCAAAGTACATTCTaGCCATATCAACAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSQQSTF*PYQQGE
Trigger: CTCTCCCTGTTGATATGGCCAGAATGTACTTTGCTG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAAAGCTCAGTGTTTCTGTaGATGGCAAGGTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKSSVFL*MARWCF
Trigger: AAAGCACCACCTTGCCATCCACAGAAACACTGAGCT...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGAGAAGCGGGTTCACTaGATGGCTTTGAGGAATTAT +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLEKRVH*MALRNY
Trigger: ATAATTCCTCAAAGCCATCCAGTGAACCCGCTTCTC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGACTTTCTTTCTTCTTaGATTTCTTGCTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTDFLSS*ISCSAS
Trigger: TGAGGCGGAGCAAGAAATCCAAGAAGAAAGAAAGTC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGCGGTAGCTTGGTGTTaGAGACCGGGGAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASAVAWC*RPGRQA
Trigger: AGCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCCTGGCAGGCATTCGTaGGAGCCAGCTGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASPGRHS*EPAVIL
Trigger: CAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCTCCTGGCAGTAGGATaGGGACCTTTCCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASLLAVG*GPFLSL
Trigger: GAGGGACAGGAAAGGTCCCCATCCTACTGCCAGGAG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTCAGTGGTGTGGTCTTaGTGTTTAGGGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASSVVWS*CLGELP
Trigger: GGGCAGCTCCCCTAAACACCAAGACCACACCACTGA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTGCCAGGTCAGGGCTGTaGAGGTTCTGCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSARSGL*RFCPRQ
Trigger: CTGCCTGGGGCAGAACCTCCACAGCCCTGACCTGGC...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTTGGGTGTCCCGGCCTTaGCAAATGCACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASWVSRP*QMHRLL
Trigger: GAGAAGCCTGTGCATTTGCCAAGGCCGGGACACCCA...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGCAATCTTTCACAGTaGATGGTTTGGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGNLSQ*MVWGAL
Trigger: CAAAGCACCCCAAACCATCCACTGTGAAAGATTGCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCTTGTCGCCCTCTGCTaGAGCATAAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSLVALC*SIKCFS
Trigger: ACTGAAGCACTTTATGCTCCAGCAGAGGGCGACAAG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCAGGGTCCTTCCCTTTaGTTTCCCCTACGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASQGPSL*FPLRWQ
Trigger: CTGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCAAGGACTGCCTGGGCTaGATGGGGTTGGACTCAGGC +
Preference number: 4 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFKDCLG*MGLDSG
Trigger: GCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTT...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CCA 90 bp GTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTTCCCGCCACCGGGTTTaGAAGAAGGTACCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VLFNVVAIHPRGDVLPAFSRHRV*KKVPPS
Trigger: ACTGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGA...AAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR CCA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCGCATGCGCACGAGGTTaGACGTCTCTGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLACARG*TSLQRP
Trigger: CGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGC...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR CCA 90 bp GGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGGGTCCACTAGTCTCTaGCGATGTCGGGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GYVLFNVVAIHPRGDVLPGSTSL*RCRAEL
Trigger: CAACTCAGCCCGACATCGCCAGAGACTAGTGGACCC...TGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS-3UTR TCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTCAATAATCTGGTGGTaGGTGAAACTAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSIIWW*VKLSTP
Trigger: TGGAGTGCTTAGTTTCACTCACCACCAGATTATTGA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCAATAATCTGGTGGTaGGTGAAACTAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLSIIWW*VKLSTP
Trigger: TGGAGTGCTTAGTTTCACTCACCACCAGATTATTGA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCAATTCTCCACTTTCTaGACGATCATGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSQFSTF*TIMSLL
Trigger: CAGGAGGCTCATGATCGTTCAGAAAGTGGAGAATTG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGAAGTAGGCCAGAACTaGGTTTATGTCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSEVGQN*VYVCCF
Trigger: AAAGCAACAGACATAAACTCAGTTCTGGCCTACTTC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTTGCTCTCCCTCTGTTaGAATAGCCAGTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSLLSLC*NSQFGK
Trigger: CTTCCCAAACTGGCTATTTCAACAGAGGGAGAGCAA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACTTCGTCCATTTATCTaGTCCAAGTGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTLRPFI*SKCSEK
Trigger: TTTTTCAGAGCACTTGGATCAGATAAATGGACGAAG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGTTCACTGGATGGCTTTaGGGAATTATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGFTGWL*GIICTV
Trigger: GACAGTACAGATAATTCCTCAAAGCCATCCAGTGAA...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTTCACTGGATGGCTTTaGGGAATTATCTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLFTGWL*GIICTV
Trigger: GACAGTACAGATAATTCCTCAAAGCCATCCAGTGAA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR TCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTGGATCACAATCGGCTaGTGTGGACTGGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASWITIG*CGLAEA
Trigger: AGCTTCTGCCAGTCCACATCAGCCGATTGTGATCCA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTACACAGTGCTGGTTTTaGAAGGTAGTCAAGACACAG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSTQCWF*KVVKTQ
Trigger: CTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATGATGTCGGGCTGAGTTaGAATGGCTCTTCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHDVGLS*NGSSEA
Trigger: AGCCTCCGAAGAGCCATTTCAACTCAGCCCGACATC...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS-3UTR GCA 90 bp AATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAACTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: NSRKYREVMRPWWDLSKQLVTAH*LLSFSG
Trigger: ACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG...TTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR GCA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAATGTTCTCAGTGGCGATaGTTTCGGTGGTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKCSQWR*FRWYRN
Trigger: ATTTCTGTACCACCGAAAGCATCGCCACTGAGAACA...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTGTTCTCAGTGGCGATaGTTTCGGTGGTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSCSQWR*FRWYRN
Trigger: ATTTCTGTACCACCGAAAGCATCGCCACTGAGAACA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTTGGGGAATAAATTCTaGCTTCTGTCTCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVLGNKF*LLSQQT
Trigger: AGTTTGCTGAGACAGAAGGCAGAATTTATTCCCCAA...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAAGTAAAGGAGAAGGCTaGTTGGCTAGCTTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTSKGEG*LASFLK
Trigger: TTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTTACT...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCGAGGACTACAAGGACTaGCTGGGCTGGATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFEDYKD*LGWMGL
Trigger: CAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTC...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR GCA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGTGGAGCTACTAGATaGAGCAGAAATGAATGTGAA +
Preference number: 4 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLCGATR*SRNECE
Trigger: TTCACATTCATTTCTGCTGCATCTAGTAGCTCCACA...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCTCTTCAATTCACTGTaGGTTCAAGGCCATATGACT +
Preference number: 4 (lower is better)
Translates to: WFIIIISWSQQAGERPGLLFNSL*VQGHMT
Trigger: AGTCATATGGCCTTGAACCCACAGTGAATTGAAGAG...CAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp TGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGGGGGGAGAAATTTCTTaGACTATCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: WFIIIISWSQQAGERPGLGGEIS*TILRAI
Trigger: AATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCC...CAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp CATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCTGGCGATGCTTTCGGTaGTACAGAAATGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: HHNYFMVTAGGRTSRAASWRCFR*YRNVLI
Trigger: TATCAAAACATTTCTGTACCACCGAAAGCATCGCCA...GCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp TCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGTGGGATTTATCCAAGCAATCTCTGAGCTGTAGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SRKYREVMRPWWDLSKQSLSCSL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCTACAGCTCAG...AGATTGCTTGGATAAATCCCACCAGGGCCTCATCACCTCACGATACTTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGACAAGTCCATGCACTaGTTCTCCATTGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSDKSMH*FSIDVS
Trigger: ACTCACATCAATGGAGAACCAGTGCATGGACTTGTC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATAGGCTTGCGCGATCTTaGAATTGCCCAGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNRLARS*NCPVSV
Trigger: GACACTCACTGGGCAATTCCAAGATCGCGCAAGCCT...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGCTCTCTTGCACTGGTaGTATCGTTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSALLHW*YRSFSH
Trigger: GTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGTCTGGAGACCTCGGCTaGGGGGCAGGAACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKSGDLG*GAGTKA
Trigger: AGCCTTGGTTCCTGCCCCCCAGCCGAGGTCTCCAGA...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: VLFNVVAIHPRGDVLPAFTTRTA*AGWGWT
Trigger: AGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGT...AAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTTTACCGGTTACAACTaGGAAGGCATCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSFTGYN*EGIWKK
Trigger: CTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTATTTCCGAAACGGCATaGGTGGAGGGGATAATATGT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSISETA*VEGIIC
Trigger: ACATATTATCCCCTCCACCCATGCCGTTTCGGAAAT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp CATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAGGCAAAGTAAAGTTTaGGAGCACAGTCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: HHNYFMVTAGGRTSRAASRQSKV*EHSPKI
Trigger: AATTTTTGGACTGTGCTCTCAAACTTTACTTTGCCT...GCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCATTTCAGAATATTCTaGACTCCAGCTCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLHFRIF*TPAQCF
Trigger: GAAACACTGAGCTGGAGTTCAGAATATTCTGAAATG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGCTTCGTCCATTTATCTaGTCCAAGTGCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGLRPFI*SKCSEK
Trigger: TTTTTCAGAGCACTTGGATCAGATAAATGGACGAAG...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp CAGGACCAAGTATACAAGCTCAGTTCTGCCACAACAATTCTATCCATCTCTGCTAGAGAATCGCTCAGTTaGAACTTCCTCTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QDQVYKLSSATTILSISARESLS*NFLFWG
Trigger: TCCCCAGAAGAGGAAGTTTCAACTGAGCGATTCTCT...AGCAGAGATGGATAGAATTGTTGTGGCAGAACTGAGCTTGTATACTTGGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR GCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCAGGAGAAAGCTCTCTTaGACTGGTGGTATCGTTCTT +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSRRKLS*TGGIVL
Trigger: AAGAACGATACCACCAGTGCAAGAGAGCTTTCTCCT...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGAGCTTGTCGCCCTCTaGTGGAGCATAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASELVAL*WSIKCF
Trigger: GAAGCACTTTATGCTCCAGCAGAGGGCGACAAGCTC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR GCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGG +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASPHLGC*ISETAW
Trigger: CCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGGGGAGAAATTTCTTaGACTATCTTGAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGGEIS*TILRAI
Trigger: AATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTGGCGATGCTTTCGGTaGTACAGAAATGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQWRCFR*YRNVLI
Trigger: TATCAAAACATTTCTGTACCACCGAAAGCATCGCCA...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCATCATAATTATTTCATaGTCACAGCAGGCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLIIIIS*SQQAGE
Trigger: TTCTCCCGCCTGCTGTGACCATGAAATAATTATGAT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp AGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGATCATAATTATTTCATaGTCACAGCAGGCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RPWWDLSKQSRASSIIWWIIIIS*SQQAGE
Trigger: TTCTCCCGCCTGCTGTGACCATGAAATAATTATGAT...CCACCAGATTATTGAACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGACCTCAGAATCACTTCTaGTGCAATGTATTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGPQNHF*CNVFRC
Trigger: ACACCTGAATACATTGCACCAGAAGTGATTCTGAGG...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGACAAGTCCATGCACTaGTTCTCCATTGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSDKSMH*FSIDVS
Trigger: ACTCACATCAATGGAGAACCAGTGCATGGACTTGTC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGGGTGGAGCGGTAGCTTaGTGTTGGAGACCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKGGAVA*CWRPGR
Trigger: TCTCCCCGGTCTCCAACACCAAGCTACCGCTCCACC...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTTTTTCCCACTGCTGCTaGGGAGAACTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: KRSGYEMCGATRCSRNECFSHCC*GELVAQ
Trigger: CTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAA...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GTAATCCTAAAGCAGGCACACCCATTCTTATTTCCTCTCAATCCACGATGTTCTGCCAGAAGCCACATCTaGGTTGCTGCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: VILKQAHPFLFPLNPRCSARSHI*VAAFPK
Trigger: TTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGC...AGAACATCGTGGATTGAGAGGAAATAAGAATGGGTGTGCCTGCTTTAGGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR CCA 90 bp AGCTGGAAGAAGAGTAGATACCCTCCACAGGACCAAGTATACAAGCTCAGTTCTTTTACCCTACGCAGCTaGAAGAAGAGTAGATACCCT +
Preference number: 4 (lower is better)
Translates to: SWKKSRYPPQDQVYKLSSFTLRS*KKSRYP
Trigger: AGGGTATCTACTCTTCTTCCAGCTGCGTAGGGTAAA...AGAACTGAGCTTGTATACTTGGTCCTGTGGAGGGTATCTACTCTTCTTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452953.5
3UTR CAA 72 bp TCCCCGACAGACTTGTCCCGATGGCTGAATGTAGGATaGGGTTATGACAACTGCCAAACACAGATATGTATT +
Preference number: 4 (lower is better)
Translates to: SPTDLSRWLNVG*GYDNCQTQICI
Trigger: AATACATATCTGTGTTTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp GTAGACATGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCTTCCCACTCCTCAAATaGGGCAAAGTAAAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VDMVHHNYFMVTAGGRTSFPLLK*GKVKFE
Trigger: CTCAAACTTTACTTTGCCTCATTTGAGGAGTGGGAA...GGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCATGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR TCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAAGACGTTCTTCCATCTaGGCTGTAGCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIARRSSI*AVAFGN
Trigger: GTTCCCAAAGGCTACAGCTCAGATGGAAGAACGTCT...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTTCCTTCTCTTCTGCTaGATTCTGAGTGATTCGATC +
Preference number: 4 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSFLLFC*ILSDSI
Trigger: GATCGAATCACTCAGAATTCAGCAGAAGAGAAGGAA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR TCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGCTGCATGGGTGCTGCTaGCAAAAGCTCGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKLHGCC*QKLGSQ
Trigger: CTGAGAGCCGAGCTTTTGTCAGCAGCACCCATGCAG...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGACTGGTCTGGAACTCCTaGCCTCGTGATCCACTCACC +
Preference number: 4 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRLVWNS*PRDPLT
Trigger: GGTGAGTGGATCACGAGGTCAGGAGTTCCAGACCAG...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGAACGGAAGAATCGATaGTGTTTGACTTCATATGCA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSERKNR*CLTSYA
Trigger: TGCATATGAAGTCAAACAGCATCGATTCTTCCGTTC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR GCA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGG +
Preference number: 4 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFPHLGC*ISETAW
Trigger: CCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGG...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTTAAGCTTTTCCGGTTaGTTGTTCGGCAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSLSFSG*LFGKNF
Trigger: GAAGTTTTTGCCGAACAAGCAACCGGAAAAGCTTAA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp ATGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCACAGTCCAAAAATTaGGGTCAGACATATCCATTT +
Preference number: 4 (lower is better)
Translates to: MVHHNYFMVTAGGRTSRAAQSKN*GQTYPF
Trigger: AAATGGATATGTCTGACCCCAATTTTTGGACTGTGC...AGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCATGCATCTGTTCTCAGTaGCGATGCTTTCGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIACICSQ*RCFRWY
Trigger: GTACCACCGAAAGCATCGCCACTGAGAACAGATGCA...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTATCATAATTATTTCATaGTCACAGCAGGCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSIIIIS*SQQAGE
Trigger: TTCTCCCGCCTGCTGTGACCATGAAATAATTATGAT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCATACCCTGTCCTTCTTTaGCATGGCCTTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIAYPVLL*HGLLLL
Trigger: AAGCAGCAGAAGGCCATGCCAAAGAAGGACAGGGTA...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCAGGAGAAACTTCGGCTaGTGTGGAGTAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASRRNFG*CGVKEK
Trigger: CTTCTCCTTTACTCCACACCAGCCGAAGTTTCTCCT...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCTAGGGGAGCTGCTCTaGGAGGAATTAGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASLGELL*EELVPD
Trigger: ATCTGGTACTAATTCCTCCCAGAGCAGCTCCCCTAG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTTTTGGAGTTGTCACTaGTTTTCGCAGTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSFWSCH*FSQFLE
Trigger: TTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTGGCCCACTCTTACTGTaGCCCTTCCCCTCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSGPLLL*PFPSLL
Trigger: TAGCAGAGAGGGGAAGGGCCACAGTAAGAGTGGGCC...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTTTTGTTCTGGGAGCCTaGGGTAGCAGGAAACACATC +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASFVLGA*GSRKHI
Trigger: GATGTGTTTCCTGCTACCCCAGGCTCCCAGAACAAA...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp AATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGAAAGCAATTCCACTTCTaGGAATCTATCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: NCNPSGTLWHSQADMLLGKQFHF*ESIKLP
Trigger: AGGAAGTTTGATAGATTCCCAGAAGTGGAATTGCTT...TCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp GGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCCAGAAGCCACATCTaGGTTGCTGCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: GYVLFNVVAIHPRGDVLPARSHI*VAAFPK
Trigger: TTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGC...TGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR TCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCAGAGAGGGACTTTGTaGCTTTCCCCGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASQRGTL*LSPRFS
Trigger: AGAAAATCTCGGGGAAAGTCACAAAGTCCCTCTCTG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATAATTCATCCAAGGGGTaGTGTTCTCCCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHNSSKG*CSPSIW
Trigger: CCAAATGCTGGGAGAACATCACCCCTTGGATGAATT...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR TCA 90 bp GTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTAATTCATCCAAGGGGTaGTGTTCTCCCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: VLFNVVAIHPRGDVLPAFNSSKG*CSPSIW
Trigger: CCAAATGCTGGGAGAACATCACCCCTTGGATGAATT...AAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR TCA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATACTACTCAGTGAAGACTaGAATTGCAACCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SQDPFYGYFLQIATSPQILLSED*NCNPSG
Trigger: CCCAGAAGGGTTGCAATTTCAGTCTTCACTGAGTAG...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGAGGGGGACCGTTTCATaGCATTGGGCTTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKRGTVS*HWACLP
Trigger: AGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCT...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCACCCAGTCACAATCACTaGTTCTGCACAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GYVLFNVVAIHPRGDVLPPSHNH*FCTNFL
Trigger: GAGGAAGTTTGTGCAGAAGCAGTGATTGTGACTGGG...TGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTCAGTGTTTCTGTGGATaGCAAGGTGGTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASQCFCG*QGGAFG
Trigger: ACCAAAAGCACCACCTTGCCATCCACAGAAACACTG...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAGGTAATCGATGTTaGCCAGCTTGCTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASGGNRC*PACCLT
Trigger: AGTTAGACAGCAAGCTGGCCAACATCGATTACCTCC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCATTCAAGAGCAGGGCTaGTGCAGGACTACTACAAAA +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASIQEQG*CRTTTK
Trigger: TTTTGTAGTAGTCCTGCACCAGCCCTGCTCTTGAAT...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATGTTCTCCCAGCATTTaGACACACAGGGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: YVLFNVVAIHPRGDVLPACSPSI*THRADN
Trigger: ATTGTCAGCCCTGTGTGTCCAAATGCTGGGAGAACA...TGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR TCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTTCCTTCTCTTCTGCTaGATTCTGAGTGATTCGATC +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASFLLFC*ILSDSI
Trigger: GATCGAATCACTCAGAATTCAGCAGAAGAGAAGGAA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCAATTCATCCAAGGGGTaGTGTTCTCCCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: LDMFYLMWWQFIQGVMFSNSSKG*CSPSIW
Trigger: CCAAATGCTGGGAGAACATCACCCCTTGGATGAATT...GGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR TCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTCTTTTATACTTCAGTaGTTTTCCAGGGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASSFILQ*FSRARS
Trigger: GCTTCTGGCCCTGGAAAATCACTGAAGTATAAAAGA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGGTGGATGGTTTGGGGTaGTTTGGAGACAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKVDGLG*FGDRVC
Trigger: GCAAACCCTGTCTCCAAAGCACCCCAAACCATCCAC...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp AGCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTAAGCCACATCTGGGTTaGTGCATTTCCGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: SFGYVLFNVVAIHPRGDVKPHLG*CISETA
Trigger: TGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTT...AACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACACAAAATGGGTCATaGTCATTCGTGTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIATQNGS*SFVSQD
Trigger: GTCCTGAGACACGAATGAGCATGACCCATTTTGTGT...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATAAGCCCAACTGAGCTCTaGAAGAGAAAAACTACTCAG +
Preference number: 4 (lower is better)
Translates to: SQDPFYGYFLQIATSPQISPTEL*KRKTTQ
Trigger: CTGAGTAGTTTTTCTCTTGCAGAGCTCAGTTGGGCT...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCACTGAGCTGTAGCCTTTaGGAACCTTTCTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIALSCSL*EPFFVD
Trigger: GTCTACAAAGAAAGGTTCCCAAAGGCTACAGCTCAG...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTTATTGAGTCCCAGTTaGCTAATGATGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASLLSPS*LMMYLG
Trigger: TCCCAGGTACATCATTAGCCAACTGGGACTCAATAA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTGCTCTGTGCAGACTCTaGGGAAGGCAGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSALCRL*GRQFCL
Trigger: AAGACAGAACTGCCTTCCCCAGAGTCTGCACAGAGC...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTATCTTTCACAGTGGATaGTTTGGGGTGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASIFHSG*FGVLWR
Trigger: TCTCCAAAGCACCCCAAACCATCCACTGTGAAAGAT...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CCA 90 bp TTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTGTGTTCTCCCAGCATTTaGACACACAGGGAGAATTCA +
Preference number: 4 (lower is better)
Translates to: FYLMWWQFIQGVMFSQHLCSPSI*THRENS
Trigger: TGAATTCTCCCTGTGTGTCCAAATGCTGGGAGAACA...CAAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CCA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGACCTTCTGGGACACTCTaGCATTCTCAGGCTGACATG +
Preference number: 4 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRPSGTL*HSQADM
Trigger: CATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGG...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAAAATTGCAACCCTTCTaGGACACTCTGGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIAKLQPF*DTLAFS
Trigger: TGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATTT...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGGGTTGGTATGGTAACTaGTGCAACTTCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKGWYGN*CNFSWE
Trigger: CTCCCAGGAGAAGTTGCATCAGTTACCATACCAACC...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp ATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAGGTTGGTATGGTAACTaGTGCAACTTCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILWLFPSNSNQSPNMDLSGWYGN*CNFSWE
Trigger: CTCCCAGGAGAAGTTGCATCAGTTACCATACCAACC...TGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCATCAATAATCTGGTGGTaGGTGAAACTAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIASIIWW*VKLSTP
Trigger: TGGAGTGCTTAGTTTCACTCACCACCAGATTATTGA...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR TCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGAAGTAGGCCAGAACTaGGTTTATGTCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASEVGQN*VYVCCF
Trigger: AAAGCAACAGACATAAACTCAGTTCTGGCCTACTTC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR TCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTCTTTTATACTTCAGTaGTTTTCCAGGGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHSFILQ*FSRARS
Trigger: GCTTCTGGCCCTGGAAAATCACTGAAGTATAAAAGA...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR GCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTCTCTCCAGGGGATTCTaGCTGAGGAGTAAGGTAATC +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSLSRGF*LRSKVI
Trigger: GATTACCTTACTCCTCAGGCAGAATCCCCTGGAGAG...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTTGGGGAATAAATTCTaGCTTCTGTCTCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASLGNKF*LLSQQT
Trigger: AGTTTGCTGAGACAGAAGGCAGAATTTATTCCCCAA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGAGTGCTCTGAAAAACTaGCAACTGACAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKSALKN*QLTGWS
Trigger: GCTCCACCCTGTCAGTTGGCAGTTTTTCAGAGCACT...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCCACAATCACTGCTTCTaGACAAACTTCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFHNHCF*TNFLFW
Trigger: CCAGAAGAGGAAGTTTGTGCAGAAGCAGTGATTGTG...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR GCA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCCAGTCACAATCACTaGTTCTGCACAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLPSHNH*FCTNFL
Trigger: GAGGAAGTTTGTGCAGAAGCAGTGATTGTGACTGGG...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR CCA 90 bp ATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ILWLFPSNSNQSPNMDLSNGLRH*GRNFLD
Trigger: GTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATT...TGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGAGAGGTGATGAGGCCCTaGTGGGATTTATCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDREVMRP*WDLSKQ
Trigger: TTGCTTGGATAAATCCCACCAGGGCCTCATCACCTC...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATTATTGAGTCCCAGTTaGCTAATGATGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQDPFYGYFLQIATSPQILLSPS*LMMYLG
Trigger: TCCCAGGTACATCATTAGCCAACTGGGACTCAATAA...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCTGTTCTCCCAGCATTTaGACACACAGGGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLCSPSI*THRADN
Trigger: ATTGTCAGCCCTGTGTGTCCAAATGCTGGGAGAACA...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR TCA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTATTAGAGCTACTCACTaGTTCATCTGTTTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASIRATH*FICFWC
Trigger: ACACCAGAAACAGATGAATCAGTGAGTAGCTCTAAT...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR TCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAAGAAAAACTACTCAGTaGAGACTGAAATTGCAACCC +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIARKTTQ*RLKLQP
Trigger: GGGTTGCAATTTCAGTCTTCACTGAGTAGTTTTTCT...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGACTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRLVTAH*LLSFSG
Trigger: ACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTTTCATGGCAAACCTCTaGCGGGATTCTTTATGCCGA +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSFMANL*RDSLCR
Trigger: TCGGCATAAAGAATCCCGGCAGAGGTTTGCCATGAA...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCACAATCACTGCTTCTaGACAAACTTCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLHNHCF*TNFLFW
Trigger: CCAGAAGAGGAAGTTTGTGCAGAAGCAGTGATTGTG...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR GCA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCACAGGGAGAATTCAGTaGAGATCATTCCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFTGRIQ*RSFPPK
Trigger: TTTTGGAGGGAATGATCTGCACTGAATTCTCCCTGT...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCATGGCGATGCTTTCGGTaGTACAGAAATGTTTTGATA +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIAWRCFR*YRNVLI
Trigger: TATCAAAACATTTCTGTACCACCGAAAGCATCGCCA...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAATCATAATTATTTCATaGTCACAGCAGGCGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIAIIIIS*SQQAGE
Trigger: TTCTCCCGCCTGCTGTGACCATGAAATAATTATGAT...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp ATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAGTGATGAGGCCCTGGTaGGATTTATCCAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: ILWLFPSNSNQSPNMDLSVMRPW*DLSKQS
Trigger: AGATTGCTTGGATAAATCCCACCAGGGCCTCATCAC...TGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp ATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCATGTCCTTCTTTGGCATaGCCTTCTGCTGCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ILWLFPSNSNQSPNMDLSCPSLA*PSAASN
Trigger: ATTGGAAGCAGCAGAAGGCCATGCCAAAGAAGGACA...TGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
3UTR CAA 72 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTaGCTAAAAACAGCAAGCTTCATCTACAACATAAGG +
Preference number: 4 (lower is better)
Translates to: LDAAEMNVKPRN*LKTASFIYNIR
Trigger: CCTTATGTTGTAGATGAAGCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGATGTTCTCAGTGGCGATaGTTTCGGTGGTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRCSQWR*FRWYRN
Trigger: ATTTCTGTACCACCGAAAGCATCGCCACTGAGAACA...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR GCA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGACTCTTCGTCTTAGAATaGTGGACTCATCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRLFVLE*WTHPSH
Trigger: GTGAGATGGATGAGTCCAGCATTCTAAGACGAAGAG...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTGTTTTATTTAATGTGGTaGCAATTCATCCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FYLMWWQFIQGVMFSQHLFYLMW*QFIQGV
Trigger: CACCCCTTGGATGAATTGCCACCACATTAAATAAAA...CAAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR CCA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTTTATTTAATGTGGTaGCAATTCATCCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHFYLMW*QFIQGV
Trigger: CACCCCTTGGATGAATTGCCACCACATTAAATAAAA...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR CCA 90 bp ATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCATTCGTCTTAGAATGCTaGACTCATCCATCTCACCCT +
Preference number: 4 (lower is better)
Translates to: ILWLFPSNSNQSPNMDLSFVLEC*THPSHP
Trigger: AGGGTGAGATGGATGAGTCCAGCATTCTAAGACGAA...TGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp TATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCAAAGCAATTCCACTTCTaGGAATCTATCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: YVLFNVVAIHPRGDVLPAKQFHF*ESIKLP
Trigger: AGGAAGTTTGATAGATTCCCAGAAGTGGAATTGCTT...TGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTTTTACCGGTTACAACTaGGAAGGCATCTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSFTGYN*EGIWKK
Trigger: CTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAA...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATCAGGACCCATTTTATaGCTATTTCCTTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: SQDPFYGYFLQIATSPQISGPIL*LFPSNS
Trigger: GCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGA...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CCA 90 bp GTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTATGTTTTATTTAATGTaGTGGCAATTCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VLFNVVAIHPRGDVLPAFMFYLM*WQFIQG
Trigger: CCCTTGGATGAATTGCCACCACATTAAATAAAACAT...AAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR TCA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGCATTTCAGAATATTCTaGACTCCAGCTCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKHFRIF*TPAQCF
Trigger: GAAACACTGAGCTGGAGTTCAGAATATTCTGAAATG...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR GCA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTAGTAAAGGAGAAGGCTaGTTGGCTAGCTTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSSKGEG*LASFLK
Trigger: TTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTTACT...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CCA 90 bp AGCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTATGTTTTATTTAATGTaGTGGCAATTCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SFGYVLFNVVAIHPRGDVMFYLM*WQFIQG
Trigger: CCCTTGGATGAATTGCCACCACATTAAATAAAACAT...AACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS-3UTR CCA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCATGTTTTATTTAATGTaGTGGCAATTCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLMFYLM*WQFIQG
Trigger: CCCTTGGATGAATTGCCACCACATTAAATAAAACAT...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411628.5
ENST00000432817.5
ENST00000450827.5
CDS GCA 90 bp CCGCCCGGGCCCGGCCGCAAACGGAGGCTCCCGCGCGCGGGGACATaGCCGCTCGGGTCCGCGATCTGCGCTCCACTGTGCTCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: PPGPGRKRRLPRAGT*PLGSAICAPLCSRA
Trigger: AGCGCGGGAGCACAGTGGAGCGCAGATCGCGGACCCGAGCGGGCATGTCCCCGCGCGCGGGAGCCTCCGTTTGCGGCCGGGCCCGGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS GCA 90 bp CACCCGGAGAGGACGCGGCGACCAGCGCAGAGGCTGGAGTCCGGCTaGCGTGGCCACTGCAGCCGCGGGGCACCGGCTCTGGCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: HPERTRRPAQRLESG*RGHCSRGAPALAPP
Trigger: CGGAGGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGCGTCCTCTCCGGGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS TCA 90 bp GCCCGGGCGCCCAGGGTGCCTCCCAACGGCGGCGGCGGCGGCGGCTaGTGCTCTCTGGAGAAGCCGCCGGGCTCCCCTTCCTCCGACAGA +
Preference number: 5 (lower is better)
Translates to: ARAPRVPPNGGGGGG*CSLEKPPGSPSSDR
Trigger: TCTGTCGGAGGAAGGGGAGCCCGGCGGCTTCTCCAGAGAGCATCAGCCGCCGCCGCCGCCGCCGTTGGGAGGCACCCTGGGCGCCCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 90 bp CGGAGGCTCCCGCGCGCGGGGACATGCCCGCTCGGGTCCGCGATCTaGGCTCCACTGTGCTCCCGCGCTGCACCCGAGCCGCGGGTACTG +
Preference number: 5 (lower is better)
Translates to: RRLPRAGTCPLGSAI*APLCSRAAPEPRVL
Trigger: CAGTACCCGCGGCTCGGGTGCAGCGCGGGAGCACAGTGGAGCGCAGATCGCGGACCCGAGCGGGCATGTCCCCGCGCGCGGGAGCCTCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS CCA 90 bp GGCCGAGGAAGCACCCGGAGAGGACGCGGCGACCAGCGCAGAGGCTaGAGTCCGGCTGCCGTGGCCACTGCAGCCGCGGGGCACCGGCTC +
Preference number: 5 (lower is better)
Translates to: GRGSTRRGRGDQRRG*SPAAVATAAAGHRL
Trigger: GAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGCGTCCTCTCCGGGTGCTTCCTCGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 90 bp GTGCCAGGAGCGGGGGCCCGTCTGAAGTCCCCGCCACCCTGGCGGTaGTCCGCAGGCACCCGGCCATCCGACATCGCACCCTCGCTGGCG +
Preference number: 5 (lower is better)
Translates to: VPGAGARLKSPPPWR*SAGTRPSDIAPSLA
Trigger: CGCCAGCGAGGGTGCGATGTCGGATGGCCGGGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTCCTGGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 90 bp GCCGCTCCCGGGCTGCAGGGAGCCCCGCCAGCGACTACATGGCAGTaGCGGGGCCGCAGGAGCCCGCTGCTAAGTTCACAGCCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: AAPGLQGAPPATTWQ*RGRRSPLLSSQPPG
Trigger: CCCGGGCGGCTGTGAACTTAGCAGCGGGCTCCTGCGGCCCCGTCACTGCCATGTAGTCGCTGGCGGGGCTCCCTGCAGCCCGGGAGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS GCA 90 bp CGCGGGCTCCTGGGCTCAGGCTCACTGGCACTGCCGCTCCCGGGCTaGAGGGAGCCCCGCCAGCGACTACATGGCAGTGACGGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: RGLLGSGSLALPLPG*REPRQRLHGSDGAA
Trigger: TGCGGCCCCGTCACTGCCATGTAGTCGCTGGCGGGGCTCCCTGCAGCCCGGGAGCGGCAGTGCCAGTGAGCCTGAGCCCAGGAGCCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS CCA 90 bp TGGAGGGTGCCAGGAGCGGGGGCCCGTCTGAAGTCCCCGCCACCCTaGCGGTGCTCCGCAGGCACCCGGCCATCCGACATCGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: WRVPGAGARLKSPPP*RCSAGTRPSDIAPS
Trigger: CGAGGGTGCGATGTCGGATGGCCGGGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTCCTGGCACCCTCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GGAGAGGACGCGGCGACCAGCGCAGAGGCTGGAGTCCGGCTGCCGTaGCCACTGCAGCCGCGGGGCACCGGCTCTGGCGCCTCCGAAACT +
Preference number: 5 (lower is better)
Translates to: GEDAATSAEAGVRLP*PLQPRGTGSGASET
Trigger: AGTTTCGGAGGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGCGTCCTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 90 bp TCCTGGCGGCCCACCTTCCGGGAGACTGGGCGTTTCAGGCAGCCTTaGTCCACTGGCCGGGCGCGGCTGAGCGGCGGCACGTCGCACACG +
Preference number: 5 (lower is better)
Translates to: SWRPTFRETGRFRQP*STGRARLSGGTSHT
Trigger: CGTGTGCGACGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGGCCGCCAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp ACGCGGCGACCAGCGCAGAGGCTGGAGTCCGGCTGCCGTGGCCACTaGAGCCGCGGGGCACCGGCTCTGGCGCCTCCGAAACTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: TRRPAQRLESGCRGH*SRGAPALAPPKLSP
Trigger: GGGAGAAAGTTTCGGAGGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS TCA 90 bp AGTGGCAGAGACCATCCTGGAGGGTGCCAGGAGCGGGGGCCCGTCTaGAGTCCCCGCCACCCTGGCGGTGCTCCGCAGGCACCCGGCCAT +
Preference number: 5 (lower is better)
Translates to: SGRDHPGGCQERGPV*SPRHPGGAPQAPGH
Trigger: ATGGCCGGGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTCCTGGCACCCTCCAGGATGGTCTCTGCCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp GCGCGGCTGAGCGGCGGCACGTCGCACACGTTCTCATCCAGGCTCTaGAGCGGCGCCTCCCGCTGGGACTGCTCCCGCTGCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ARLSGGTSHTFSSRL*SGASRWDCSRCTSS
Trigger: AGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAACGTGTGCGACGTGCCGCCGCTCAGCCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TCCTTCAGGCTGGCGGTGAGCGAGGGCGCCGACTGGCCCAGGGCCTaGCTGCGCATGCGCACGAGGTTGGACGTCTCTGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: SFRLAVSEGADWPRA*LRMRTRLDVSAEAG
Trigger: GCCGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCCAGTCGGCGCCCTCGCTCACCGCCAGCCTGAAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000432817.5
ENST00000452953.5
CDS CCA 90 bp GAAAGCAGGCTGGCGGTGAGCGAGGGCGCCGACTGGCCCAGGGCCTaGCTGCGCATGCGCACGAGGTTGGACGTCTCTGCAGAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: ESRLAVSEGADWPRA*LRMRTRLDVSAEAG
Trigger: GCCGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCCAGTCGGCGCCCTCGCTCACCGCCAGCCTGCTTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451144.1
CDS CCA 90 bp GCCCTGTCCCGGTGGCTGGCCCCGCCCATGGTGTTTGGGTCGGGGTaGTGTGACTCCAGAGGCAGGGTGGAGACCCGGAAGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALSRWLAPPMVFGSG*CDSRGRVETRKEGR
Trigger: CCTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCCGACCCAAACACCATGGGCGGGGCCAGCCACCGGGACAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GCCCACCTTCCGGGAGACTGGGCGTTTCAGGCAGCCTTGCTCCACTaGCCGGGCGCGGCTGAGCGGCGGCACGTCGCACACGTTCTCATC +
Preference number: 5 (lower is better)
Translates to: AHLPGDWAFQAALLH*PGAAERRHVAHVLI
Trigger: GATGAGAACGTGTGCGACGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GTCCAGGTCGTCCACAGACTCCTGGCGGCCCACCTTCCGGGAGACTaGGCGTTTCAGGCAGCCTTGCTCCACTGGCCGGGCGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VQVVHRLLAAHLPGD*AFQAALLHWPGAAE
Trigger: CTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGGCCGCCAGGAGTCTGTGGACGACCTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GGCGGTGCTCCGCAGGCACCCGGCCATCCGACATCGCACCCTCGCTaGCGCGCACGCTGGCCTGCTTGTGAAGAGCATCCTTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GGAPQAPGHPTSHPR*RARWPACEEHPSAG
Trigger: GCCTGCTGAAGGATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGTCGGATGGCCGGGTGCCTGCGGAGCACCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CACCGGCTCTGGCGCCTCCGAAACTTTCTCCCCCATTTCCCTGTCTaGCCCAAAGTGCCTCCCGAGCGGCGGGGGCGCGGCGCGCACTCA +
Preference number: 5 (lower is better)
Translates to: HRLWRLRNFLPHFPV*PKVPPERRGRGAHS
Trigger: TGAGTGCGCGCCGCGCCCCCGCCGCTCGGGAGGCACTTTGGGCCAGACAGGGAAATGGGGGAGAAAGTTTCGGAGGCGCCAGAGCCGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS TCA 90 bp AGACTGGGCGTTTCAGGCAGCCTTGCTCCACTGGCCGGGCGCGGCTaGGCGGCGGCACGTCGCACACGTTCTCATCCAGGCTCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: RLGVSGSLAPLAGRG*AAARRTRSHPGSAA
Trigger: CGCTGCAGAGCCTGGATGAGAACGTGTGCGACGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CAGGCACCCGGCCATCCGACATCGCACCCTCGCTGGCGCGCACGCTaGCCTGCTTGTGAAGAGCATCCTTCAGCAGGCTGCCCAGCGGTG +
Preference number: 5 (lower is better)
Translates to: QAPGHPTSHPRWRAR*PACEEHPSAGCPAV
Trigger: CACCGCTGGGCAGCCTGCTGAAGGATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGTCGGATGGCCGGGTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GGCTCTGCAGTGCTGGGCTTGGCCCCCGGCTCTCTGCCAGAAGCGTaGCTTGGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: GSAVLGLAPGSLPEA*LGELQCCLAAGLDR
Trigger: CCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp GTGCTGCTGACAAAAGCTCGGCTCTCAGAAGCCGGCGGGGGCTCCTaGTGCCCACCCGTGGGTCGGACTGGGTTCCCTGGCAGGCATTCG +
Preference number: 5 (lower is better)
Translates to: VLLTKARLSEAGGGS*CPPVGRTGFPGRHS
Trigger: CGAATGCCTGCCAGGGAACCCAGTCCGACCCACGGGTGGGCAGCAGGAGCCCCCGCCGGCTTCTGAGAGCCGAGCTTTTGTCAGCAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp GGGAGCGGGCAGCGTGGCCTGGCCAGGTCAGGGCTGTGGAGGTTCTaGCCCAGGCAGGTCAGAAGCTTGGGGTCAGTGGTGTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GSGQRGLARSGLWRF*PRQVRSLGSVVWSW
Trigger: CCAAGACCACACCACTGACCCCAAGCTTCTGACCTGCCTGGGGCAGAACCTCCACAGCCCTGACCTGGCCAGGCCACGCTGCCCGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CTTCCGGACCGGTACCGCTGCCCGCCGAGTTTGGGTGCAAGACCGTaGAGAGTGCTGGGCCGGATGTGCCCGGACCCTGCTGGGGAATTG +
Preference number: 5 (lower is better)
Translates to: LPDRYRCPPSLGARP*RVLGRMCPDPAGEL
Trigger: CAATTCCCCAGCAGGGTCCGGGCACATCCGGCCCAGCACTCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGCGGTACCGGTCCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp ACGTCGCACACGTTCTCATCCAGGCTCTGCAGCGGCGCCTCCCGCTaGGACTGCTCCCGCTGCACCTCCTCTTGGGTCACCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TSHTFSSRLCSGASR*DCSRCTSSWVTSRL
Trigger: CAGCCTGGAGGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAACGTGTGCGACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CCGGCTCTCTGCCAGAAGCGTGGCTTGGGGAACTGCAATGCTGCCTaGCAGCCGGGCTGGACAGGTCTTTGGCCGTCAGAGGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PALCQKRGLGNCNAA*QPGWTGLWPSEGAE
Trigger: CTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TGGCAGTCACCGAGAGAGCCCTGTCCCGGTGGCTGGCCCCGCCCATaGTGTTTGGGTCGGGGTGGTGTGACTCCAGAGGCAGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: WQSPREPCPGGWPRP*CLGRGGVTPEAGWR
Trigger: TCTCCACCCTGCCTCTGGAGTCACACCACCCCGACCCAAACACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCTCTCGGTGACTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TGGAGTCCGGCTGCCGTGGCCACTGCAGCCGCGGGGCACCGGCTCTaGCGCCTCCGAAACTTTCTCCCCCATTTCCCTGTCTGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: WSPAAVATAAAGHRL*RLRNFLPHFPVWPK
Trigger: TTTGGGCCAGACAGGGAAATGGGGGAGAAAGTTTCGGAGGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS-3UTR CAA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCATGCCCCCGGCGGCCTaGGCAGAAGAGGTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAMPPAA*AEEVSL
Trigger: CAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCAT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS GCA 90 bp CACACGTTCTCATCCAGGCTCTGCAGCGGCGCCTCCCGCTGGGACTaGTCCCGCTGCACCTCCTCTTGGGTCACCTCCAGGCTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HTFSSRLCSGASRWD*SRCTSSWVTSRLCL
Trigger: CAAGCACAGCCTGGAGGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAACGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp TTGGCCCCCGGCTCTCTGCCAGAAGCGTGGCTTGGGGAACTGCAATaGTGCCTGGCAGCCGGGCTGGACAGGTCTTTGGCCGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LAPGSLPEAWLGELQ*CLAAGLDRSLAVRG
Trigger: CCCTCTGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp ACCCCCGCGGCTGGCCGCTCCGCGCCTTTCAACCGGTTCTCGCTATaGACAAAGGAAAGGCCGGCCTCGAGCTTGTCGCCCTCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: TPAAGRSAPFNRFSL*TKERPASSLSPSAG
Trigger: TCCAGCAGAGGGCGACAAGCTCGAGGCCGGCCTTTCCTTTGTGCATAGCGAGAACCGGTTGAAAGGCGCGGAGCGGCCAGCCGCGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp GAGCCTTCCTATGGTCCCTGTTGCTGGGGGCTGGAAGCTCCAGCATaGCCCCGGCGGCCTTGGCAGAAGAGGTGTCGCTGCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: EPSYGPCCWGLEAPA*PRRPWQKRCRCWLQ
Trigger: CTGCAGCCAGCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCATGCTGGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGAAGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CAGCATGCCCCCGGCGGCCTTGGCAGAAGAGGTGTCGCTGCTGGCTaGAGAGGCCTCTCTAACTCCGGCCCTGGTTTCAGGGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QHAPGGLGRRGVAAG*RGLSNSGPGFREAG
Trigger: TCCAGCTTCCCTGAAACCAGGGCCGGAGTTAGAGAGGCCTCTGCAGCCAGCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCATGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp ACCTTGGCCTTCAGCTTGTCGCGGTCCAGGTCGTCCACAGACTCCTaGCGGCCCACCTTCCGGGAGACTGGGCGTTTCAGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: TLAFSLSRSRSSTDS*RPTFRETGRFRQPC
Trigger: GCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGGCCGCCAGGAGTCTGTGGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TGCAGTGCTGGGCTTGGCCCCCGGCTCTCTGCCAGAAGCGTGGCTTaGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGGACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: CSAGLGPRLSARSVA*GTAMLPGSRAGQVF
Trigger: AAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp ACAAGGAAAAGAGAAAGCAGGCTGGCGGTGAGCGAGGGCGCCGACTaGCCCAGGGCCTGGCTGCGCATGCGCACGAGGTTGGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: TRKRESRLAVSEGAD*PRAWLRMRTRLDVS
Trigger: AGAGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCCAGTCGGCGCCCTCGCTCACCGCCAGCCTGCTTTCTCTTTTCCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451144.1
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGCGTTTCAGGCAGCCTaGCTCCACTGGCCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTAFQAA*LHWPGA
Trigger: CGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS TCA 90 bp GCCACGCCTCACCTTGCCCAGCTCCTTCTCACAGGGAATTCCAGCTaGGTGCAGAGAGGAGTTGTCTCTGGGCGGGGGCCTCGCCTCACC +
Preference number: 5 (lower is better)
Translates to: ATPHLAQLLLTGNSS*VQRGVVSGRGPRLT
Trigger: GGTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCCCTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CGCCTCACCTTGCCCAGCTCCTTCTCACAGGGAATTCCAGCTGAGTaGAGAGAGGAGTTGTCTCTGGGCGGGGGCCTCGCCTCACCTGGG +
Preference number: 5 (lower is better)
Translates to: RLTLPSSFSQGIPAE*REELSLGGGLASPG
Trigger: CCCAGGTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCCCTGTGAGAAGGAGCTGGGCAAGGTGAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TGCTGCCCACCCGTGGGTCGGACTGGGTTCCCTGGCAGGCATTCGTaGGAGCCAGCTGTCATCTTGGGCTTCAGCACAGGGCAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: CCPPVGRTGFPGRHS*EPAVILGFSTGQRL
Trigger: CAACCTCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGGGAACCCAGTCCGACCCACGGGTGGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TTCCAGGTGGCTGCAGAGACCGCCTGGCAAGAAGCGCTTCGGGCTTaGGTTCCACGCCACGCCTCACCTTGCCCAGCTCCTTCTCACAGG +
Preference number: 5 (lower is better)
Translates to: FQVAAETAWQEALRA*VPRHASPCPAPSHR
Trigger: CCTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACATCTGCAGTGCTGGGCTaGGCCCCCGGCTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTSAVLG*APGSLP
Trigger: TGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGA...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTCTGCAGTGCTGGGCTaGGCCCCCGGCTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLSAVLG*APGSLP
Trigger: TGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTGCGCAGCAACAGGCTaGGGAGGGTCCTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLCAATG*GGSWGL
Trigger: GAGCCCCCAGGACCCTCCCAAGCCTGTTGCTGCGCA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACAGGCCGGCCTCGAGCTaGTCGCCCTCTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHRPASS*SPSAGA
Trigger: TGCTCCAGCAGAGGGCGACAAGCTCGAGGCCGGCCT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGGGGCTGGGGATGGCTaGGTCACGTCTCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTGAGDG*VTSLPT
Trigger: CGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCC...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS TCA 90 bp AGGGAGTCACTCTTTGTCATGTGGGTTCGGCCCTCCCCGGCAGGCTaGGCCTTCCTATGGTCCCTGTTGCTGGGGGCTGGAAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RESLFVMWVRPSPAG*AFLWSLLLGAGSSS
Trigger: GCTGGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGAAGGCTCAGCCTGCCGGGGAGGGCCGAACCCACATGACAAAGAGTGACTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CTCTGCATGTGTCAGCCCTCGCAGCAGAGCGCTCGCTTCTGGCTGTaGGAGGGCCTCTTTCAGACGATTCCCTCAGGCCTGGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LCMCQPSQQSARFWL*EGLFQTIPSGLASP
Trigger: GGGAGAAGCCAGGCCTGAGGGAATCGTCTGAAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTGCTGCGAGGGCTGACACATGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AGGGCTCTCTGCATGTGTCAGCCCTCGCAGCAGAGCGCTCGCTTCTaGCTGTGGGAGGGCCTCTTTCAGACGATTCCCTCAGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RALCMCQPSQQSARF*LWEGLFQTIPSGLA
Trigger: AGCCAGGCCTGAGGGAATCGTCTGAAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTGCTGCGAGGGCTGACACATGCAGAGAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TTGGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGGACAGGTCTTTaGCCGTCAGAGGGGGCGGAGGGATGCTGCTGGGATGCCTTTGTA +
Preference number: 5 (lower is better)
Translates to: LGNCNAAWQPGWTGL*PSEGAEGCCWDAFV
Trigger: TACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCGGGTGGAGCGGTAGCTaGGTGTTGGAGACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPGWSGS*VLETGE
Trigger: CTCCCCGGTCTCCAACACCAAGCTACCGCTCCACCC...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTCGGACTGCACGCGCTaGAGCAGCGGGGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSDCTR*SSGDLG
Trigger: CCCCAGGTCCCCGCTGCTCAAGCGCGTGCAGTCCGA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGAGTGCAGAGAGGAGTaGTCTCTGGGCGGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLECREE*SLGGGL
Trigger: GAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTC...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCAGAAGCGCTTCGGGCTaGGGTTCCACGCCACGCCTC +
Preference number: 5 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPRSASG*GSTPRL
Trigger: GAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCT...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTCTGCAGTGCTGGGCTaGGCCCCCGGCTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVSAVLG*APGSLP
Trigger: TGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGA...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGACCGTTTCATGCCATaGGGCTTGTCTGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWADRFMP*GLSASV
Trigger: GACGGAGGCAGACAAGCCCAATGGCATGAAACGGTC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCCCCGCCCATGGTGTTaGGGTCGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPPRPWC*GRGGVT
Trigger: AGTCACACCACCCCGACCCAAACACCATGGGCGGGG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGGGCTGGGGATGGCTaGGTCACGTCTCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGAGDG*VTSLPT
Trigger: CGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS GCA 90 bp GCGGGGAGTGCATCTTGCTGGGAAAGGCTTGCGCGATCTTGGAATTaGCCAGTGAGTGTCCCAGAAGAGGGGATGGTGACCGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: AGSASCWERLARSWN*PVSVPEEGMVTAAG
Trigger: CCCCGCAGCGGTCACCATCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp ACTGCTCCCGCTGCACCTCCTCTTGGGTCACCTCCAGGCTGTGCTTaGGGGAGCACAGGTGCTTCTTGTCACTGCCGTAAGAGGGCGACA +
Preference number: 5 (lower is better)
Translates to: TAPAAPPLGSPPGCA*GSTGASCHCRKRAT
Trigger: TGTCGCCCTCTTACGGCAGTGACAAGAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGGTGACCCAAGAGGAGGTGCAGCGGGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CCGGGCTGGACAGGTCTTTGGCCGTCAGAGGGGGCGGAGGGATGCTaGTGGGATGCCTTTGTAGAGGCTGCTCCTTCCTTTCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: PGWTGLWPSEGAEGC*WDAFVEAAPSFQVP
Trigger: AGGAACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CAGCCGGGCTGGACAGGTCTTTGGCCGTCAGAGGGGGCGGAGGGATaGTGCTGGGATGCCTTTGTAGAGGCTGCTCCTTCCTTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: QPGWTGLWPSEGAEG*CWDAFVEAAPSFQV
Trigger: AACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp GTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTaGCCCTGGGCCCTCCCCGTTACAAGGCCTTTTTGTGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: VVKTQSPVQDGSPQS*PWALPVTRPFCEGC
Trigger: GCAGCCCTCACAAAAAGGCCTTGTAACGGGGAGGGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS CCA 90 bp TGGGGAGAACTGGTGGCACAGAGGCCCTCACGTCACCACTTGGGCTaGGGCTCTGTGCAGACTCTGGGGAAGGCAGTTCTGTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: WGELVAQRPSRHHLG*GSVQTLGKAVLSWR
Trigger: CCTCCAAGACAGAACTGCCTTCCCCAGAGTCTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGGGCCTCTGTGCCACCAGTTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGNGET*DFPEGK
Trigger: TTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCCTTGCTGGGAAAGGCTaGCGCGATCTTGGAATTGCC +
Preference number: 5 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWALAGKG*RDLGIA
Trigger: GGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAG...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGGCGGGGAGTGCATCTaGCTGGGAAAGGCTTGCGCG +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVGGECI*LGKACA
Trigger: CGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGGCCTGGCTTCTCCCTaGAGGGGGAAGCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHGLASP*RGKLQV
Trigger: CACCTGAAGCTTCCCCCTCAAGGGAGAAGCCAGGCC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGACGCCACGCCTCACCTaGCCCAGCTCCTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLTPRLT*PSSFSQ
Trigger: CTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS GCA 90 bp TGGCAAGAAGCGCTTCGGGCTTGGGTTCCACGCCACGCCTCACCTTaGCCAGCTCCTTCTCACAGGGAATTCCAGCTGAGTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: WQEALRAWVPRHASP*PAPSHREFQLSAER
Trigger: CCTCTCTGCACTCAGCTGGAATTCCCTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CGGCCTCGAGCTTGTCGCCCTCTGCTGGAGCATAAAGTGCTTCAGTaGATTTCTTCCCTTCCGCCCTTCTGTCGGTGTTGGCGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: RPRACRPLLEHKVLQ*ISSLPPFCRCWRPA
Trigger: AGCCGGCCGCCAACACCGACAGAAGGGCGGAAGGGAAGAAATGCACTGAAGCACTTTATGCTCCAGCAGAGGGCGACAAGCTCGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GGCTGGACAGGTCTTTGGCCGTCAGAGGGGGCGGAGGGATGCTGCTaGGATGCCTTTGTAGAGGCTGCTCCTTCCTTTCAGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GWTGLWPSEGAEGCC*DAFVEAAPSFQVPW
Trigger: CCAAGGAACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GAGACTTTTCCGGGAGGGCCGTGGATCGGAAAGAACTCTGCCCAGTaGCTGAGGGGGACCGTTTCATGCCATTGGGCTTGTCTGCCTCCG +
Preference number: 5 (lower is better)
Translates to: ETFPGGPWIGKNSAQ*LRGTVSCHWACLPP
Trigger: CGGAGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATCCACGGCCCTCCCGGAAAAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGGGTGGAGCGGTAGCTaGGTGTTGGAGACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFGWSGS*VLETGE
Trigger: CTCCCCGGTCTCCAACACCAAGCTACCGCTCCACCC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCAGGTGGGTTGCGGGGTaGGAGAGGGCGTCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVRWVAG*ERASGP
Trigger: TGGCCCGGACGCCCTCTCCAACCCCGCAACCCACCT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTACCTCCAGGCTGTGCTaGCGGGAGCACAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVTSRLC*REHRCF
Trigger: GAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGGT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCAGCACAGGGCAGAGGTaGTCCTCTTTGTCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWASTGQR*SSLSSS
Trigger: ACTTGAGGACAAAGAGGACAACCTCTGCCCTGTGCT...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGAGTGCAGAGAGGAGTaGTCTCTGGGCGGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFECREE*SLGGGL
Trigger: GAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGACGCCACGCCTCACCTaGCCCAGCTCCTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERTPRLT*PSSFSQ
Trigger: CTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGT...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCAGAAGCGCTTCGGGCTaGGGTTCCACGCCACGCCTC +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFRSASG*GSTPRL
Trigger: GAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTGCGCAGCAACAGGCTaGGGAGGGTCCTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLCAATG*GGSWGL
Trigger: GAGCCCCCAGGACCCTCCCAAGCCTGTTGCTGCGCA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGTGGGTTGTGGCTaGGCGTCTAGAGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLVGCG*ASRGAL
Trigger: CAGGGCTCCTCTAGACGCCAAGCCACAACCCACCAG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACACTGGGTGTCCCGGCCTaGGCAAATGCACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTLGVPA*ANAQAS
Trigger: AGAAGCCTGTGCATTTGCCAAGGCCGGGACACCCAG...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTTCATGCCATTGGGCTaGTCTGCCTCCGTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPFMPLG*SASVGG
Trigger: GCCACCGACGGAGGCAGACAAGCCCAATGGCATGAA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTTCCTATGGTCCCTGTaGCTGGGGGCTGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHFLWSL*LGAGSS
Trigger: GGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGAA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGTCCCGCCACCGGGTTaGGAAGAAGGTACCTCCCAG +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPVPPPG*EEGTSQ
Trigger: CTGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGAC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS GCA 90 bp GACAGGTCTTTGGCCGTCAGAGGGGGCGGAGGGATGCTGCTGGGATaGCTTTGTAGAGGCTGCTCCTTCCTTTCAGGTTCCTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: DRSLAVRGGGGMLLG*LCRGCSFLSGSLAP
Trigger: TGGTGCCAAGGAACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGCCGGCAAGGTGGTGCTTTaGGTTTTGTCCACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: VKTQSPVQDGSPQSCPWAGKVVL*VLSTES
Trigger: AGACTCTGTGGACAAAACCAAAAGCACCACCTTGCC...GGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTAGCGGTAGCTTGGTGTaGGAGACCGGGGAGACAAGC +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVSGSLV*ETGETS
Trigger: GCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGCT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCGCTGCCCGCCGAGTTaGGGTGCAAGACCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSRCPPS*GARPWR
Trigger: TCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGCG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCAGGTGGGTTGCGGGGTaGGAGAGGGCGTCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVRWVAG*ERASGP
Trigger: TGGCCCGGACGCCCTCTCCAACCCCGCAACCCACCT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATACCTTGGCCTTCAGCTaGTCGCGGTCCAGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHTLAFS*SRSRSS
Trigger: GGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGT...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACTTCTTCACCACCACCTaGGCCTTCAGCTTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHFFTTT*AFSLSR
Trigger: CCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGAA...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCATCGGAGAAGCTCCTaGGCCTGGGAGGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERHRRSS*AWEDFS
Trigger: GGAGAAGTCCTCCCAGGCCAAGGAGCTTCTCCGATG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGAGCCAGCTGTCATCTaGGGCTTCAGCACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFEREPAVI*GFSTGQ
Trigger: CTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCTC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCACGTCACCACTaGGGCTGGGGCTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLPSRHH*GWGSVQ
Trigger: CTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGGG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCCCTCACGTCACCACTaGGGCTGGGGCTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSPSRHH*GWGSVQ
Trigger: CTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGGG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGCCTTTCCTGTCCCTCTaGAACTCTGGGTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLPFLSL*NSGSGR
Trigger: CCTGCCTGACCCAGAGTTCAAGAGGGACAGGAAAGG...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAAGGCAGGTCAGAAGCTaGGGGTCAGTGGTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LSPVSMRLRALPGGHSHTRQVRS*GSVVWS
Trigger: AGACCACACCACTGACCCCAAGCTTCTGACCTGCCT...TGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGGCCTGGCTTCTCCCTaGAGGGGGAAGCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHGLASP*RGKLQV
Trigger: CACCTGAAGCTTCCCCCTCAAGGGAGAAGCCAGGCC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTAGAAGCGCTTCGGGCTaGGGTTCCACGCCACGCCTC +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSRSASG*GSTPRL
Trigger: GAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCT...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGGGTGTCCCGGCCTaGGCAAATGCACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLGVPA*ANAQAS
Trigger: AGAAGCCTGTGCATTTGCCAAGGCCGGGACACCCAG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTTCCTATGGTCCCTGTaGCTGGGGGCTGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPFLWSL*LGAGSS
Trigger: GGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGAA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGCAGGGTCCTTCCCTTaGGTTTCCCCTACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPAGSFP*VSPTVA
Trigger: TGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTGC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS TCA 90 bp AGCCAGGCTTCTCCGTTCCACTGTCCACCCGGCCTGTTAAGGCCTTaGGGGGAACAAAAGAGACGGCACTCATCTGAGCTGCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: SQASPFHCPPGLLRP*GEQKRRHSSELHGC
Trigger: GCACCCATGCAGCTCAGATGAGTGCCGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCCGGGTGGACAGTGGAACGGAGAAGCCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp GCACTCTTGGGCCTCACGATGTGTCTGACGATGGTGGGCGGGGAGTaGATCTTGCTGGGAAAGGCTTGCGCGATCTTGGAATTGCCCAGT +
Preference number: 5 (lower is better)
Translates to: ALLGLTMCLTMVGGE*ILLGKACAILELPS
Trigger: ACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCATCGTCAGACACATCGTGAGGCCCAAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CTGTCTTGGAGGCCTGAGGTCCGGACAGGAGAGCAATGTCCAGAGTaGCCTCGATCGGCTTCAGGCATGAGACAGACCTACCTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LSWRPEVRTGEQCPE*PRSASGMRQTYLPA
Trigger: AGCTGGAAGGTAGGTCTGTCTCATGCCTGAAGCCGATCGAGGGCACTCTGGACATTGCTCTCCTGTCCGGACCTCAGGCCTCCAAGACAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CAGCTCAGAGACTTTTCCGGGAGGGCCGTGGATCGGAAAGAACTCTaGCCAGTGGCTGAGGGGGACCGTTTCATGCCATTGGGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QLRDFSGRAVDRKEL*PVAEGDRFMPLGLS
Trigger: AGACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATCCACGGCCCTCCCGGAAAAGTCTCTGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CCTTCTCACAGGGAATTCCAGCTGAGTGCAGAGAGGAGTTGTCTCTaGGCGGGGGCCTCGCCTCACCTGGGCCATCTTTGTGGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: PSHREFQLSAERSCL*AGASPHLGHLCGSF
Trigger: AAACGAACCACAAAGATGGCCCAGGTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCCCTGTGAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TTTCACTCTTCTCACTCTCAATTCCAGGTGGCTGCAGAGACCGCCTaGCAAGAAGCGCTTCGGGCTTGGGTTCCACGCCACGCCTCACCT +
Preference number: 5 (lower is better)
Translates to: FHSSHSQFQVAAETA*QEALRAWVPRHASP
Trigger: AGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGTGAGAAGAGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AAAGGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATGGGGTTaGACTCAGGCTCCTGGGAGTGAGATCCAAGGTCAGCCCCGGAAT +
Preference number: 5 (lower is better)
Translates to: KGQERTTRTAWAGWG*TQAPGSEIQGQPRN
Trigger: ATTCCGGGGCTGACCTTGGATCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405643.5
ENST00000407621.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCAGCGGTAGCTTGGTGTaGGAGACCGGGGAGACAAGC +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSGSLV*ETGETS
Trigger: GCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGCT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGACCCTGCTGGGGAATaGGGGGCACTAGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHDPAGE*GALELG
Trigger: CCCTAGTTCTAGTGCCCCCAATTCCCCAGCAGGGTC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGACCCTGCTGGGGAATaGGGGGCACTAGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFDPAGE*GALELG
Trigger: CCCTAGTTCTAGTGCCCCCAATTCCCCAGCAGGGTC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTCGGACTGCACGCGCTaGAGCAGCGGGGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSDCTR*SSGDLG
Trigger: CCCCAGGTCCCCGCTGCTCAAGCGCGTGCAGTCCGA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTTCTTCACCACCACCTaGGCCTTCAGCTTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPFFTTT*AFSLSR
Trigger: CCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGAA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCCCTCACGTCACCACTaGGGCTGGGGCTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVPSRHH*GWGSVQ
Trigger: CTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGGG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGGCCTGGCTTCTCCCTaGAGGGGGAAGCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSGLASP*RGKLQV
Trigger: CACCTGAAGCTTCCCCCTCAAGGGAGAAGCCAGGCC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGACCGTTTCATGCCATaGGGCTTGTCTGCCTCCGTC +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPDRFMP*GLSASV
Trigger: GACGGAGGCAGACAAGCCCAATGGCATGAAACGGTC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGGGGCTGGGGATGGCTaGGTCACGTCTCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVGAGDG*VTSLPT
Trigger: CGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS GCA 90 bp GTCCAGGGCTCAGACTTCGGGAACGGGGGCGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGATGCTTTCGGTGGTACAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: VQGSDFGNGGASACS*ICSQWRCFRWYRNV
Trigger: AACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGCGCCCCCGTTCCCGAAGTCTGAGCCCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000490016.6
CDS CCA 90 bp CGTCCCGGTGATGACAGAGAGCCAAACCGAACCTCTCTAAAGGACTaGACTAACACTCTCTCGAGGGGGAGGGGGAGGCTGCAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: RPGDDREPNRTSLKD*TNTLSRGRGRLQVW
Trigger: CCAAACTTGCAGCCTCCCCCTCCCCCTCGAGAGAGTGTTAGTCCAGTCCTTTAGAGAGGTTCGGTTTGGCTCTCTGTCATCACCGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CCA 90 bp AAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCTGGGAGTGAGATCCAAGGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: KVKGQERTTRTAWAG*GWTQAPGSEIQGQP
Trigger: GGGCTGACCTTGGATCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405643.5
ENST00000407621.1
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGATACCCTGTCCTTCTTaGGCATGGCCTTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLIPCPS*AWPSAA
Trigger: AGCAGCAGAAGGCCATGCCAAAGAAGGACAGGGTAT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPGNGET*DFPEGK
Trigger: TTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCC...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGGGTGGAGCGGTAGCTaGGTGTTGGAGACCGGGGAG +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVGWSGS*VLETGE
Trigger: CTCCCCGGTCTCCAACACCAAGCTACCGCTCCACCC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCGCTGCCCGCCGAGTTaGGGTGCAAGACCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLRCPPS*GARPWR
Trigger: TCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGCG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGAAGGTGGGTTGCGGGGTaGGAGAGGGCGTCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGRWVAG*ERASGP
Trigger: TGGCCCGGACGCCCTCTCCAACCCCGCAACCCACCT...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTCTTGCTGGGAAAGGCTaGCGCGATCTTGGAATTGCC +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVLAGKG*RDLGIA
Trigger: GGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAG...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGGGGCTCCGCACTCTaGGGCCTCACGATGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGGSAL*GLTMCL
Trigger: CAGACACATCGTGAGGCCCAAGAGTGCGGAGCCCCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGCGTTTCAGGCAGCCTaGCTCCACTGGCCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSAFQAA*LHWPGA
Trigger: CGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCACCTTGGCCTTCAGCTaGTCGCGGTCCAGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVTLAFS*SRSRSS
Trigger: GGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGTCAGTGGTGTGGTCTaGGTGTTTAGGGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFVSGVV*VFRGAA
Trigger: GGCAGCTCCCCTAAACACCAAGACCACACCACTGAC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCTGCGCAGCAACAGGCTaGGGAGGGTCCTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLCAATG*GGSWGL
Trigger: GAGCCCCCAGGACCCTCCCAAGCCTGTTGCTGCGCA...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGGGGCCAGGCCGGGGCTaGTGGCTGCTGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQGPGRG*WLLLSL
Trigger: CAGTGAAAGCAGCAGCCACAAGCCCCGGCCTGGCCC...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGGGCCAGGCCGGGGCTaGTGGCTGCTGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLGPGRG*WLLLSL
Trigger: CAGTGAAAGCAGCAGCCACAAGCCCCGGCCTGGCCC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCATCCCATCGCTGGCTTaGTTCTGGGAGCCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFIPSLA*FWEPGV
Trigger: TACCCCAGGCTCCCAGAACAAAGCCAGCGATGGGAT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACAGGCCGGCCTCGAGCTaGTCGCCCTCTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDRPASS*SPSAGA
Trigger: TGCTCCAGCAGAGGGCGACAAGCTCGAGGCCGGCCT...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCATGCCCCCGGCGGCCTaGGCAGAAGAGGTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLMPPAA*AEEVSL
Trigger: CAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCAT...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGCAGGGTCCTTCCCTTaGGTTTCCCCTACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSAGSFP*VSPTVA
Trigger: TGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTGC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCCTACGCAGCTGGAAGAAGAGTAGATACCCTCCACAGGACCAAGTATACAAGCCGCATGCGCACGAGGTaGGACGTCTCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PYAAGRRVDTLHRTKYTSRMRTR*DVSAEA
Trigger: GGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCG...GCTTGTATACTTGGTCCTGTGGAGGGTATCTACTCTTCTTCCAGCTGCGTAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS TCA 90 bp GGACAGGAGAGCAATGTCCAGAGTGCCCTCGATCGGCTTCAGGCATaGGACAGACCTACCTTCCAGCTTATACTCGGAGGGGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GQESNVQSALDRLQA*DRPTFQLILGGALP
Trigger: AGGAAGAGCCCCTCCGAGTATAAGCTGGAAGGTAGGTCTGTCTCATGCCTGAAGCCGATCGAGGGCACTCTGGACATTGCTCTCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 90 bp GTGCATTTCTTCCCTTCCGCCCTTCTGTCGGTGTTGGCGGCCGGCTaGCTCGGGCTTTTGTCTGTCTGTCTGTTGTCTGTCTGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: VHFFPSALLSVLAAG*LGLLSVCLLSVCLH
Trigger: GTGCAAACAGACAGACAACAGACAGACAGACAAAAGCCCGAGTCAGCCGGCCGCCAACACCGACAGAAGGGCGGAAGGGAAGAAATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CTCACCTGGGCCATCTTTGTGGTTCGTTTTCCCACCCGGCGCCCATaGTTTCTCCATGGCCTGGGTCTGTGTATAGAAATCTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LTWAIFVVRFPTRRP*FLHGLGLCIEIWVG
Trigger: ACCCACCCAGATTTCTATACACAGACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGGAAAACGAACCACAAAGATGGCCCAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AGCCTCTCCAGGGGATTCTGCCTGAGGAGTAAGGTAATCAGATCCTaGGCATCAGGTGGGGGTGCCTCATCCTTCTCAGGCCAGTTGATC +
Preference number: 5 (lower is better)
Translates to: SLSRGFCLRSKVIRS*ASGGGASSFSGQLI
Trigger: GATCAACTGGCCTGAGAAGGATGAGGCACCCCCACCTGATGCCCAGGATCTGATTACCTTACTCCTCAGGCAGAATCCCCTGGAGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CCA 90 bp AAAGCTCTCTTGCACTGGTGGTATCGTTCTTTTTCCCACTGCTGCTaGGGAGAACTGGTGGCACAGAGGCCCTCACGTCACCACTTGGGC +
Preference number: 5 (lower is better)
Translates to: KALLHWWYRSFSHCC*GELVAQRPSRHHLG
Trigger: GCCCAAGTGGTGACGTGAGGGCCTCTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CTGGGTCAGGCAGGGAAACTGCTGGTGAATTCTGGAGACCTCGGCTaGGGGGCAGGAACCAAGGCTCCAGCAGGTAGGATTTATTCATCT +
Preference number: 5 (lower is better)
Translates to: LGQAGKLLVNSGDLG*GAGTKAPAGRIYSS
Trigger: AGATGAATAAATCCTACCTGCTGGAGCCTTGGTTCCTGCCCCCCAGCCGAGGTCTCCAGAATTCACCAGCAGTTTCCCTGCCTGACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TGGGGATTGCTTTCCATGACTGTTCCAGGGCTCCTGGCAGTAGGATaGGGACCTTTCCTGTCCCTCTTGAACTCTGGGTCAGGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: WGLLSMTVPGLLAVG*GPFLSLLNSGSGRE
Trigger: TTCCCTGCCTGACCCAGAGTTCAAGAGGGACAGGAAAGGTCCCCATCCTACTGCCAGGAGCCCTGGAACAGTCATGGAAAGCAATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TGGAGTTGTCACTGGTTTTCGCAGTTTCTGGAAAGCACAGTTCCATaGAGGGCTCTCTGCATGTGTCAGCCCTCGCAGCAGAGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: WSCHWFSQFLESTVP*RALCMCQPSQQSAR
Trigger: GCGAGCGCTCTGCTGCGAGGGCTGACACATGCAGAGAGCCCTCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACCAGTGACAACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AGGGCTCCAAAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACTCAGGCTCCTGGGAGTGAGATCCAA +
Preference number: 5 (lower is better)
Translates to: RAPKVKGQERTTRTA*AGWGWTQAPGSEIQ
Trigger: TTGGATCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407621.1
CDS CCA 90 bp CAGGGCCAGAAGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATaGGTGGAGGGGATAATATGTGGTCAAGCTCCTCGTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: QGQKPHLGCCISETA*VEGIICGQAPRPAP
Trigger: AGGAGCAGGACGAGGAGCTTGACCACATATTATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFGNGET*DFPEGK
Trigger: TTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTTCTTCTTGGATTTCTaGCTCCGCCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPFFLDF*LRLTIR
Trigger: CCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGAA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCGCTGCCCGCCGAGTTaGGGTGCAAGACCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLRCPPS*GARPWR
Trigger: TCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGCG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTGGCGGGGAGTGCATCTaGCTGGGAAAGGCTTGCGCG +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSGGECI*LGKACA
Trigger: CGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCC...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGGGGGCTCCGCACTCTaGGGCCTCACGATGTGTCTG +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLGGSAL*GLTMCL
Trigger: CAGACACATCGTGAGGCCCAAGAGTGCGGAGCCCCC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCACCTCCAGGCTGTGCTaGCGGGAGCACAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVTSRLC*REHRCF
Trigger: GAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGGT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGCGTTTCAGGCAGCCTaGCTCCACTGGCCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSAFQAA*LHWPGA
Trigger: CGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCACCTTGGCCTTCAGCTaGTCGCGGTCCAGGTCGTCC +
Preference number: 5 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLTLAFS*SRSRSS
Trigger: GGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGT...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTAGCACAGGGCAGAGGTaGTCCTCTTTGTCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGSTGQR*SSLSSS
Trigger: ACTTGAGGACAAAGAGGACAACCTCTGCCCTGTGCT...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGAGTGCAGAGAGGAGTaGTCTCTGGGCGGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLECREE*SLGGGL
Trigger: GAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTC...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGGGCTGGACAGGTCTTaGGCCGTCAGAGGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSGLDRS*AVRGGG
Trigger: TCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCTGCCAGAAGCGTGGCTaGGGGAACTGCAATGCTGCC +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVCQKRG*GNCNAA
Trigger: GGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCA...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTTGTGGCCCCGACACTaGGTTTCTGAGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLLWPRH*VSERRG
Trigger: CCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACAA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCCTTTGGAGACAGGGTTaGCTTTTCACCAACAGCGGA +
Preference number: 5 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPLWRQG*LFTNSG
Trigger: TCCGCTGTTGGTGAAAAGCAAACCCTGTCTCCAAAG...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATGAAGCCACATCTGGGTaGCTGCATTTCCGAAACGGC +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHEATSG*LHFRNG
Trigger: GCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTC...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGCATGCGCACGAGGTaGGACGTCTCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSRMRTR*DVSAEA
Trigger: GGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCG...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGGCCTTTTAGACAGTaGGACCAGGGATCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGWPFRQ*DQGSSV
Trigger: GACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS GCA 90 bp AAGGAGAAAGCTCTCTTGCACTGGTGGTATCGTTCTTTTTCCCACTaGTGCTGGGGAGAACTGGTGGCACAGAGGCCCTCACGTCACCAC +
Preference number: 5 (lower is better)
Translates to: KEKALLHWWYRSFSH*CWGELVAQRPSRHH
Trigger: GTGGTGACGTGAGGGCCTCTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGCTTTCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp AAACTGGAGAGCTTTTCACTCTTCTCACTCTCAATTCCAGGTGGCTaGAGAGACCGCCTGGCAAGAAGCGCTTCGGGCTTGGGTTCCACG +
Preference number: 5 (lower is better)
Translates to: KLESFSLFSLSIPGG*RDRLARSASGLGST
Trigger: CGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGTGAGAAGAGTGAAAAGCTCTCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CGTAGTTCTTCCCCGAACTGTGGATCACAATCGGCTGATGTGGACTaGCAGAAGCTGCTGAGGAATCTCGGCTGGGAGAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: RSSSPNCGSQSADVD*QKLLRNLGWERNLV
Trigger: CACGAGATTCCTCTCCCAGCCGAGATTCCTCAGCAGCTTCTGCCAGTCCACATCAGCCGATTGTGATCCACAGTTCGGGGAAGAACTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CATCTTTGTGGTTCGTTTTCCCACCCGGCGCCCATGCTTTCTCCATaGCCTGGGTCTGTGTATAGAAATCTGGGTGGGTCCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: HLCGSFSHPAPMLSP*PGSVYRNLGGSFPQ
Trigger: CTGTGGGAAGGACCCACCCAGATTTCTATACACAGACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGGAAAACGAACCACAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AAAGTGCTTCAGTGCATTTCTTCCCTTCCGCCCTTCTGTCGGTGTTaGCGGCCGGCTGACTCGGGCTTTTGTCTGTCTGTCTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: KVLQCISSLPPFCRC*RPADSGFCLSVCCL
Trigger: CAGACAACAGACAGACAGACAAAAGCCCGAGTCAGCCGGCCGCCAACACCGACAGAAGGGCGGAAGGGAAGAAATGCACTGAAGCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GTCCTTCTCATTAGAAAGAGAGATGGGGCGGTCAGTGTTTGGGGCTaGGGATGGCTTGGTCACGTCTCTGCCCACGTTCTGTTTCCTAGC +
Preference number: 5 (lower is better)
Translates to: VLLIRKRDGAVSVWG*GWLGHVSAHVLFPS
Trigger: GCTAGGAAACAGAACGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCCATCTCTCTTTCTAATGAGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp GCAACTCCAAAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACTCAGGCTCCTGGGAGTGAGATCCAA +
Preference number: 5 (lower is better)
Translates to: ATPKVKGQERTTRTA*AGWGWTQAPGSEIQ
Trigger: TTGGATCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405643.5
CDS CCA 90 bp AAAGGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATGGGGTTaGACTCAGGCTCCTGGGAGTGAGACGTTTGACCAAGCAATTCCA +
Preference number: 5 (lower is better)
Translates to: KGQERTTRTAWAGWG*TQAPGSETFDQAIP
Trigger: TGGAATTGCTTGGTCAAACGTCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS CCA 90 bp AAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCTGGGAGTGAGACGTTTGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: KVKGQERTTRTAWAG*GWTQAPGSETFDQA
Trigger: TGCTTGGTCAAACGTCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS CCA 90 bp TTCCCTCCAAAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACTCAGGCTCCTGGGAGTGAGACGTTT +
Preference number: 5 (lower is better)
Translates to: FPPKVKGQERTTRTA*AGWGWTQAPGSETF
Trigger: AAACGTCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCGCTGGTGACTGCCCATaGCCTATTAAGCTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFAGDCP*PIKLFR
Trigger: CCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGC...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGTCCTTCTCAGGCCAGTaGATCTCATCACTGATGACT +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLSFSGQ*ISSLMT
Trigger: AGTCATCAGTGATGAGATCAACTGGCCTGAGAAGGA...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTGGCAAGGTGGTGCTTTaGGTTTTGTCCACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGGKVVL*VLSTES
Trigger: AGACTCTGTGGACAAAACCAAAAGCACCACCTTGCC...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGTTGAAATAGCCAGTTaGGGAAGTAGGCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHVEIAS*GSRPEL
Trigger: CAGTTCTGGCCTACTTCCCAAACTGGCTATTTCAAC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTTCTTCTTGGATTTCTaGCTCCGCCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHFFLDF*LRLTIR
Trigger: CCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGAA...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTGCGCGATCTTGGAATaGCCCAGTGAGTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSCAILE*PSECPR
Trigger: TCTGGGACACTCACTGGGCAATTCCAAGATCGCGCA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCCATCGGAGAAGCTCCTaGGCCTGGGAGGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLHRRSS*AWEDFS
Trigger: GGAGAAGTCCTCCCAGGCCAAGGAGCTTCTCCGATG...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGAGCCAGCTGTCATCTaGGGCTTCAGCACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVEPAVI*GFSTGQ
Trigger: CTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCTC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCGGCCTGTTAAGGCCTaGAGGGGAACAAAAGAGACG +
Preference number: 5 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLRPVKA*RGTKET
Trigger: CGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCCG...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCCTTTCCTGTCCCTCTaGAACTCTGGGTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDPFLSL*NSGSGR
Trigger: CCTGCCTGACCCAGAGTTCAAGAGGGACAGGAAAGG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGGCTGGACAGGTCTTaGGCCGTCAGAGGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGLDRS*AVRGGG
Trigger: TCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCAGGCTCTTTGCCCTTaGTGGCCCCGACACTTGGTT +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDQALCP*WPRHLV
Trigger: AACCAAGTGTCGGGGCCACAAAGGGCAAAGAGCCTG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTCTTTGGAGACAGGGTTaGCTTTTCACCAACAGCGGA +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGLWRQG*LFTNSG
Trigger: TCCGCTGTTGGTGAAAAGCAAACCCTGTCTCCAAAG...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCAGGCCGGCCTCGAGCTaGTCGCCCTCTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSRPASS*SPSAGA
Trigger: TGCTCCAGCAGAGGGCGACAAGCTCGAGGCCGGCCT...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGCTCCAGCAGCACGCTaGCCGGAGCCCACGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASAPAAR*PEPTRR
Trigger: CCGCCGCGTGGGCTCCGGCAAGCGTGCTGCTGGAGC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS GCA 90 bp TTGACTTCATATGCACCACCTGTTCCCAGCCTCTCCAGGGGATTCTaGCTGAGGAGTAAGGTAATCAGATCCTGGGCATCAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LTSYAPPVPSLSRGF*LRSKVIRSWASGGG
Trigger: ACCCCCACCTGATGCCCAGGATCTGATTACCTTACTCCTCAGGCAGAATCCCCTGGAGAGGCTGGGAACAGGTGGTGCATATGAAGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CCA 90 bp AGGGCTCCAAAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACTCAGGCTCCGTTTGACCAAGCAATT +
Preference number: 5 (lower is better)
Translates to: RAPKVKGQERTTRTA*AGWGWTQAPFDQAI
Trigger: AATTGCTTGGTCAAACGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434115.5
CDS CCA 90 bp CAGGGCCAGAAGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATaGGTGGAGGGGATAATATGTGGTCAAGCTAGCTCTGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: QGQKPHLGCCISETA*VEGIICGQASSASV
Trigger: CACTGAAGCAGAGCTAGCTTGACCACATATTATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGG +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERLIESQ*ANDVPG
Trigger: CCCAGGTACATCATTAGCCAACTGGGACTCAATAAG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTTCTTCTTGGATTTCTaGCTCCGCCTCACCATCCGG +
Preference number: 5 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLFFLDF*LRLTIR
Trigger: CCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGAA...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATCCAGTGTCCATTGGGGACCCTGCTGGGGAATaGGGGGCACTAGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: KGTTGLLDSWTRDPVSIGDPAGE*GALELG
Trigger: CCCTAGTTCTAGTGCCCCCAATTCCCCAGCAGGGTC...CCCAATGGACACTGGATCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCGGCGGGGAGTGCATCTaGCTGGGAAAGGCTTGCGCG +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSGGECI*LGKACA
Trigger: CGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCC...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTACCTCCAGGCTGTGCTaGCGGGAGCACAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSTSRLC*REHRCF
Trigger: GAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGGT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAAGAGCCAGCTGTCATCTaGGGCTTCAGCACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQEPAVI*GFSTGQ
Trigger: CTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCTC...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCGGCCTGTTAAGGCCTaGAGGGGAACAAAAGAGACG +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDRPVKA*RGTKET
Trigger: CGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCCG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTAAGGAGAAAGCTCTCTaGCACTGGTGGTATCGTTCT +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGKEKAL*HWWYRS
Trigger: AGAACGATACCACCAGTGCAAGAGAGCTTTCTCCTT...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTCTCTCTGTTGGGGATaGCTTTCCATGACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERSLCWG*LSMTVP
Trigger: TGGAACAGTCATGGAAAGCAATCCCCAACAGAGAGA...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCGTCAGTGGTGTGGTCTaGGTGTTTAGGGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PVTTGKASGRRSPLCLSLVSGVV*VFRGAA
Trigger: GGCAGCTCCCCTAAACACCAAGACCACACCACTGAC...GAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCGTCAGTGGTGTGGTCTaGGTGTTTAGGGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVVSGVV*VFRGAA
Trigger: GGCAGCTCCCCTAAACACCAAGACCACACCACTGAC...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCAGGCAGGTCAGAAGCTaGGGGTCAGTGGTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVRQVRS*GSVVWS
Trigger: AGACCACACCACTGACCCCAAGCTTCTGACCTGCCT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTACGCCACGCCTCACCTaGCCCAGCTCCTTCTCACAG +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSTPRLT*PSSFSQ
Trigger: CTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGT...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTGCCAGAAGCGTGGCTaGGGGAACTGCAATGCTGCC +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLCQKRG*GNCNAA
Trigger: GGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACAGGCTCTTTGCCCTTaGTGGCCCCGACACTTGGTT +
Preference number: 5 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTQALCP*WPRHLV
Trigger: AACCAAGTGTCGGGGCCACAAAGGGCAAAGAGCCTG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCATCCCATCGCTGGCTTaGTTCTGGGAGCCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVIPSLA*FWEPGV
Trigger: TACCCCAGGCTCCCAGAACAAAGCCAGCGATGGGAT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCCTGGGTGTCCCGGCCTaGGCAAATGCACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLLGVPA*ANAQAS
Trigger: AGAAGCCTGTGCATTTGCCAAGGCCGGGACACCCAG...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTATGGTTTGGGGTGCTTaGGAGACAGGGTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVMVWGA*ETGFAF
Trigger: AAAAGCAAACCCTGTCTCCAAAGCACCCCAAACCAT...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTTCATGCCATTGGGCTaGTCTGCCTCCGTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLFMPLG*SASVGG
Trigger: GCCACCGACGGAGGCAGACAAGCCCAATGGCATGAA...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCCCGCCCATGGTGTTaGGGTCGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSPRPWC*GRGGVT
Trigger: AGTCACACCACCCCGACCCAAACACCATGGGCGGGG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCTTGTTCGGCAACGTTaGACCAAGCAATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERLVRQR*TKQFHF
Trigger: GAAGTGGAATTGCTTGGTCAAACGTTGCCGAACAAG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS TCA 90 bp ACTGCTTGCTCCAAATGGGGGCTGCTCTGTCAGCCTATCCCAGAGTaGGGACACTGCCAGGTAGAGCCTCAGTCTACTCACAATGGATAT +
Preference number: 5 (lower is better)
Translates to: TACSKWGLLCQPIPE*GHCQVEPQSTHNGY
Trigger: ATATCCATTGTGAGTAGACTGAGGCTCTACCTGGCAGTGTCCTCACTCTGGGATAGGCTGACAGAGCAGCCCCCATTTGGAGCAAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS CCA 90 bp CGGCGCCCATGCTTTCTCCATGGCCTGGGTCTGTGTATAGAAATCTaGGTGGGTCCTTCCCACAGAGAGGAGATTTTTGGAGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: RRPCFLHGLGLCIEI*VGPSHREEIFGVVT
Trigger: AGTGACAACTCCAAAAATCTCCTCTCTGTGGGAAGGACCCACCCAGATTTCTATACACAGACCCAGGCCATGGAGAAAGCATGGGCGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CACAAAGTCCTTCTCATTAGAAAGAGAGATGGGGCGGTCAGTGTTTaGGGCTGGGGATGGCTTGGTCACGTCTCTGCCCACGTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: HKVLLIRKRDGAVSV*GWGWLGHVSAHVLF
Trigger: AAACAGAACGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCCATCTCTCTTTCTAATGAGAAGGACTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCGTTTGACCAAGCAATTCCACTTCTG +
Preference number: 5 (lower is better)
Translates to: KVKGQERTTRTAWAG*GWTQAPFDQAIPLL
Trigger: CAGAAGTGGAATTGCTTGGTCAAACGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434115.5
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACATTTCTTGGACTATCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHISWTI*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAAT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTGGGGGAGAAATTTCTaGGACTATCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVWGRNF*DYLEGY
Trigger: ATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCA...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGGTAACTCGTCTGGTGTaGGTTGGTATGGTAACTGAT +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERVTRLV*VGMVTD
Trigger: ATCAGTTACCATACCAACCAACACCAGACGAGTTAC...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGATCCTCAGATTCCAGTaGGGGAATAAATTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PVSMRLRALPGGHSHTVLILRFQ*GNKFCL
Trigger: AAGGCAGAATTTATTCCCCAACTGGAATCTGAGGAT...CAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACATCCTCAGATTCCAGTaGGGGAATAAATTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHILRFQ*GNKFCL
Trigger: AAGGCAGAATTTATTCCCCAACTGGAATCTGAGGAT...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHVHWMA*RNYLYC
Trigger: ACAGTACAGATAATTCCTCAAAGCCATCCAGTGAAC...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp AAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGTTTTCAAAAGTACTaGACCTTTCCACAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: KVVKTQSPVQDGSPQSCPCFQKY*TFPQPS
Trigger: CGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAACA...GGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCTCGATGTTGGCCAGCTaGCTGTCTAACTTTTCACAT +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPSMLAS*LSNFSH
Trigger: ATGTGAAAAGTTAGACAGCAAGCTGGCCAACATCGA...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTCAGAGGTTGTCCTCTTaGTCCTCAAGTGACATTTTC +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGQRLSS*SSSDIF
Trigger: GAAAATGTCACTTGAGGACAAAGAGGACAACCTCTG...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCAGAGGTTGTCCTCTTaGTCCTCAAGTGACATTTTC +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERQRLSS*SSSDIF
Trigger: GAAAATGTCACTTGAGGACAAAGAGGACAACCTCTG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTCTCTCTGTTGGGGATaGCTTTCCATGACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSLCWG*LSMTVP
Trigger: TGGAACAGTCATGGAAAGCAATCCCCAACAGAGAGA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCAGGCAGGTCAGAAGCTaGGGGTCAGTGGTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLRQVRS*GSVVWS
Trigger: AGACCACACCACTGACCCCAAGCTTCTGACCTGCCT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATGCCAGAAGCGTGGCTaGGGGAACTGCAATGCTGCC +
Preference number: 5 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGCQKRG*GNCNAA
Trigger: GGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCA...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATTGTGGCCCCGACACTaGGTTTCTGAGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQLWPRH*VSERRG
Trigger: CCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACAA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCCAGGCTCTTTGCCCTTaGTGGCCCCGACACTTGGTT +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLQALCP*WPRHLV
Trigger: AACCAAGTGTCGGGGCCACAAAGGGCAAAGAGCCTG...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCATCCCATCGCTGGCTTaGTTCTGGGAGCCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLIPSLA*FWEPGV
Trigger: TACCCCAGGCTCCCAGAACAAAGCCAGCGATGGGAT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCTGGTGGGTTGTGGCTaGGCGTCTAGAGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSLVGCG*ASRGAL
Trigger: CAGGGCTCCTCTAGACGCCAAGCCACAACCCACCAG...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATATGGTTTGGGGTGCTTaGGAGACAGGGTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHMVWGA*ETGFAF
Trigger: AAAAGCAAACCCTGTCTCCAAAGCACCCCAAACCAT...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCTGTTGTCTGTCTGTTaGCACAGGGTGGGGCAATCT +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDLLSVC*HRVGQS
Trigger: AGATTGCCCCACCCTGTGCAAACAGACAGACAACAG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGTTGTCTGTCTGTTaGCACAGGGTGGGGCAATCT +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVLLSVC*HRVGQS
Trigger: AGATTGCCCCACCCTGTGCAAACAGACAGACAACAG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGCAGGGTCCTTCCCTTaGGTTTCCCCTACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSAGSFP*VSPTVA
Trigger: TGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTGC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGCACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACA +
Preference number: 5 (lower is better)
Translates to: EAPSSAWRTFPHSAGFERHTVLV*KGSQDT
Trigger: TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTG...CCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS TCA 90 bp TTGGACACACAGGGAGAATTCAGTGCAGATCATTCCCTCCAAAAGTaGAAGGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATGGG +
Preference number: 5 (lower is better)
Translates to: LDTQGEFSADHSLQK*KAKRGLQGLPGLDG
Trigger: CCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGAGGGAATGATCTGCACTGAATTCTCCCTGTGTGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS TCA 90 bp CTGTCCCGCCACCGGGTTTGGAAGAAGGTACCTCCCTCAAGTTCCTaGGTAGAACAGGGCCAAACTTGTAGGGCTGTTGTAAAATCAGTC +
Preference number: 5 (lower is better)
Translates to: LSRHRVWKKVPPSSS*VEQGQTCRAVVKSV
Trigger: GACTGATTTTACAACAGCCCTACAAGTTTGGCCCTGTTCTACTCAGGAACTTGAGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS GCA 90 bp CAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAATCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: QREVSVVEAMLVTAH*LLSFSGCLFGNPRS
Trigger: TGACCTTGGATTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432426.5
CDS GCA 90 bp CTTTTAAACTCAGACTTCGGGAACGGGGGCGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGATGCTTTCGGTGGTACAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: LLNSDFGNGGASACS*ICSQWRCFRWYRNV
Trigger: AACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGCGCCCCCGTTCCCGAAGTCTGAGTTTAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS CCA 90 bp CTGGGAGAGGAATCTCGTGAAGAAGAAGGGTCCGAGGACAGGGAATaGGGAGACATTGGACTTCCCAGAGGGGAAACAGCAAACATATCT +
Preference number: 5 (lower is better)
Translates to: LGEESREEEGSEDRE*GDIGLPRGETANIS
Trigger: AGATATGTTTGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCTTCACGAGATTCCTCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CTGGGTGGGTCCTTCCCACAGAGAGGAGATTTTTGGAGTTGTCACTaGTTTTCGCAGTTTCTGGAAAGCACAGTTCCATGGAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LGGSFPQRGDFWSCH*FSQFLESTVPWRAL
Trigger: GAGAGCCCTCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTGTGGGAAGGACCCACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp AAACCCTGGAAAACGGTAAGTGTCCAGCTGTTCGGGGATACTATCTaGCCAGCGGGAGATCCTCCCAGAGAGACTCTGTATGTTTATGCC +
Preference number: 5 (lower is better)
Translates to: KPWKTVSVQLFGDTI*PAGDPPRETLYVYA
Trigger: GGCATAAACATACAGAGTCTCTCTGGGAGGATCTCCCGCTGGCCAGATAGTATCCCCGAACAGCTGGACACTTACCGTTTTCCAGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485768.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCATACCCTGTCCTTCTTaGGCATGGCCTTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVIPCPS*AWPSAA
Trigger: AGCAGCAGAAGGCCATGCCAAAGAAGGACAGGGTAT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp AAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGCCCCTGAAGAGTTGGATGTaGATAGCTGTTGCATTTCAG +
Preference number: 5 (lower is better)
Translates to: KGSQDTVARSGRVSTVLPLKSWM*IAVAFQ
Trigger: CTGAAATGCAACAGCTATCAACATCCAACTCTTCAG...GGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: VSMRLRALPGGHSHTVLVVHWMA*RNYLYC
Trigger: ACAGTACAGATAATTCCTCAAAGCCATCCAGTGAAC...AACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp TGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTGCTTGGCTAGCTTTTaGAAAAGAGATCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: CLNEAPSSAWRTFPHSAGCLASF*KRDLLL
Trigger: AAGGAGGAGATCTCTTTTCAAAAAGCTAGCCAAGCA...ACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGGCCAGGCCGGGGCTaGTGGCTGCTGCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASGPGRG*WLLLSL
Trigger: CAGTGAAAGCAGCAGCCACAAGCCCCGGCCTGGCCC...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCTGTTGTCTGTCTGTTaGCACAGGGTGGGGCAATCT +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVLLSVC*HRVGQS
Trigger: AGATTGCCCCACCCTGTGCAAACAGACAGACAACAG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTTCCTATGGTCCCTGTaGCTGGGGGCTGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSFLWSL*LGAGSS
Trigger: GGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGAA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATCCCCGCCCATGGTGTTaGGGTCGGGGTGGTGTGACT +
Preference number: 5 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNPRPWC*GRGGVT
Trigger: AGTCACACCACCCCGACCCAAACACCATGGGCGGGG...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp ACCCTACGCAGCTGGAAGAAGAGTAGATACCCTCCACAGGACCAAGTATACAAGGAAGCCACATCTGGGTaGCTGCATTTCCGAAACGGC +
Preference number: 5 (lower is better)
Translates to: TLRSWKKSRYPPQDQVYKEATSG*LHFRNG
Trigger: GCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTC...CTTGTATACTTGGTCCTGTGGAGGGTATCTACTCTTCTTCCAGCTGCGTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR CAA 90 bp TCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCCCACCAAGTACTAGAAGATTaGGGTGCAGCCAGTAATTTT +
Preference number: 5 (lower is better)
Translates to: SLSPVSMRLRALPGGHSHQVLED*GAASNF
Trigger: AAAATTACTGGCTGCACCCAAATCTTCTAGTACTTG...GTGGGAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS TCA 90 bp TCTCCTAGTCAGGCTCGGCCAGCTATAAACAGTAATTACATGAGTTaGGCCGTGCGTTCTGCTCAAAGCGCTGTCTGTGGGATTCAGTCG +
Preference number: 5 (lower is better)
Translates to: SPSQARPAINSNYMS*AVRSAQSAVCGIQS
Trigger: CGACTGAATCCCACAGACAGCGCTTTGAGCAGAACGCACGGCTCAACTCATGTAATTACTGTTTATAGCTGGCCGAGCCTGACTAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261569.11
CDS GCA 90 bp CAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAACTTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: QREVSVVEAMLVTAH*LLSFSGCLFGNFVF
Trigger: GAACACAAAGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261569.11
ENST00000436277.5
ENST00000447738.1
CDS GCA 90 bp CAATCTTTCACAGTGGATGGTTTGGGGTGCTTTGGAGACAGGGTTTaGTTTTCACCAACAGCGGACAGTTTCTGGTCCGCTGGCTCACTA +
Preference number: 5 (lower is better)
Translates to: QSFTVDGLGCFGDRV*FSPTADSFWSAGSL
Trigger: TAGTGAGCCAGCGGACCAGAAACTGTCCGCTGTTGGTGAAAAGCAAACCCTGTCTCCAAAGCACCCCAAACCATCCACTGTGAAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp CAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAAAAACTTCCTC +
Preference number: 5 (lower is better)
Translates to: QREVSVVEAMLVTAH*LLSFSGCLFGKNFL
Trigger: GAGGAAGTTTTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS CCA 90 bp TTCGGGAACGGGGGCGCATCGGCGTGTTCCTGCATCTGTTCTCAGTaGCGATGCTTTCGGTGGTACAGAAATGTTTTGATAAGAAGTGTA +
Preference number: 5 (lower is better)
Translates to: FGNGGASACSCICSQ*RCFRWYRNVLIRSV
Trigger: TACACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGCGCCCCCGTTCCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CCA 90 bp CTGTGCTTTCTAATCGCTGCCGAGCCATGTGAGAAGCGGGTTCACTaGATGGCTTTGAGGAATTATCTGTACTGTCCACACACTCGCTTC +
Preference number: 5 (lower is better)
Translates to: LCFLIAAEPCEKRVH*MALRNYLYCPHTRF
Trigger: GAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCGCTTCTCACATGGCTCGGCAGCGATTAGAAAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CCA 90 bp AGAGCAAAGTTTTCCAAATCACTCCCGGGTCCATGGGATTTCTGGTaGGATTCCTGTTTCTCTGGGAAGCCGTCTGCTTTCTTCACCACC +
Preference number: 5 (lower is better)
Translates to: RAKFSKSLPGPWDFW*DSCFSGKPSAFFTT
Trigger: GGTGGTGAAGAAAGCAGACGGCTTCCCAGAGAAACAGGAATCCCACCAGAAATCCCATGGACCCGGGAGTGATTTGGAAAACTTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp TCGGGCTTTTGTCTGTCTGTCTGTTGTCTGTCTGTTTGCACAGGGTaGGGCAATCTTTCACAGTGGATGGTTTGGGGTGCTTTGGAGACA +
Preference number: 5 (lower is better)
Translates to: SGFCLSVCCLSVCTG*GNLSQWMVWGALET
Trigger: TGTCTCCAAAGCACCCCAAACCATCCACTGTGAAAGATTGCCCCACCCTGTGCAAACAGACAGACAACAGACAGACAGACAAAAGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCATTTCTTGGACTATCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFISWTI*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAAT...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGGCAAGGTGGTGCTTTaGGTTTTGTCCACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTGKVVL*VLSTES
Trigger: AGACTCTGTGGACAAAACCAAAAGCACCACCTTGCC...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCAGTATCTGAAGAGTaGGATGTTGATAGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHSVSEE*DVDSCC
Trigger: GCAACAGCTATCAACATCCAACTCTTCAGATACTGA...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTTGCGCGATCTTGGAATaGCCCAGTGAGTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSCAILE*PSECPR
Trigger: TCTGGGACACTCACTGGGCAATTCCAAGATCGCGCA...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTTGCTGGGAAAGGCTaGCGCGATCTTGGAATTGCC +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSLAGKG*RDLGIA
Trigger: GGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAGAGGTTGTCCTCTTaGTCCTCAAGTGACATTTTC +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSQRLSS*SSSDIF
Trigger: GAAAATGTCACTTGAGGACAAAGAGGACAACCTCTG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTAGCACAGGGCAGAGGTaGTCCTCTTTGTCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSTGQR*SSLSSS
Trigger: ACTTGAGGACAAAGAGGACAACCTCTGCCCTGTGCT...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCGGCCTGTTAAGGCCTaGAGGGGAACAAAAGAGACG +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSRPVKA*RGTKET
Trigger: CGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCCG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCTTGTGGCCCCGACACTaGGTTTCTGAGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: YLVTVLPVTTGKASGRRSLWPRH*VSERRG
Trigger: CCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACAA...GGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TGTAATCCTAAAGCAGGCACACCCATTCTTATTTCCTCTCAATCCACGATGTTCGTCCCGCCACCGGGTTaGGAAGAAGGTACCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CNPKAGTPILISSQSTMFVPPPG*EEGTSQ
Trigger: CTGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGAC...GAACATCGTGGATTGAGAGGAAATAAGAATGGGTGTGCCTGCTTTAGGATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS-3UTR CAA 90 bp TATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCACGCATGCGCACGAGGTaGGACGTCTCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: YVLFNVVAIHPRGDVLPARMRTR*DVSAEA
Trigger: GGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCG...TGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACAGCTTTTCCGGTTGCTaGTTCGGCAAAAACTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDSFSGC*FGKNFL
Trigger: GAGGAAGTTTTTGCCGAACAAGCAACCGGAAAAGCT...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTGTGAAACCCAGGAACTaGCTAAAAACAGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSVKPRN*LKTASF
Trigger: GAAGCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCAC...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS TCA 90 bp ATAACTTCTGTGTGGACAAGTCCATGCACTGGTTCTCCATTGATGTaGGTGATAAGATCTCCAGCCTTCAGTCCTGCCTGGCATGCCGGA +
Preference number: 5 (lower is better)
Translates to: ITSVWTSPCTGSPLM*VIRSPAFSPAWHAG
Trigger: TCCGGCATGCCAGGCAGGACTGAAGGCTGGAGATCTTATCACTCACATCAATGGAGAACCAGTGCATGGACTTGTCCACACAGAAGTTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp AACGGGGGCGCATCGGCGTGTTCCTGCATCTGTTCTCAGTGGCGATaGTTTCGGTGGTACAGAAATGTTTTGATAAGAAGTGTAACTCGT +
Preference number: 5 (lower is better)
Translates to: NGGASACSCICSQWR*FRWYRNVLIRSVTR
Trigger: ACGAGTTACACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGCGCCCCCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CCA 90 bp GGCGTCCATCAGTCCTCCGTGCAAATGAAAAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGACTATCTTGAGGGCTATTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: GVHQSSVQMKNGLRH*GRNFLDYLEGYFLH
Trigger: ATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATTTTTCATTTGCACGGAGGACTGATGGACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CCA 90 bp CACAGAGAGGAGATTTTTGGAGTTGTCACTGGTTTTCGCAGTTTCTaGAAAGCACAGTTCCATGGAGGGCTCTCTGCATGTGTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: HREEIFGVVTGFRSF*KAQFHGGLSACVSP
Trigger: AGGGCTGACACATGCAGAGAGCCCTCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACACTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGG +
Preference number: 5 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTLIESQ*ANDVPG
Trigger: CCCAGGTACATCATTAGCCAACTGGGACTCAATAAG...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCTCCAAGGGATCCTTATaGAGTCCCAGTTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVSKGSL*SPSWLM
Trigger: CATTAGCCAACTGGGACTCAATAAGGATCCCTTGGA...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp TGTCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATCTGGCTGGTCCAGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: CLSLSPVSMRLRALPGGHLAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACTGGACCAGCCAG...ATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCAGCGGTAGCTTGGTGTaGGAGACCGGGGAGACAAGC +
Preference number: 5 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASSGSLV*ETGETS
Trigger: GCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGCT...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTTCGGACTGCACGCGCTaGAGCAGCGGGGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSSDCTR*SSGDLG
Trigger: CCCCAGGTCCCCGCTGCTCAAGCGCGTGCAGTCCGA...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TCTTTCTCTCTCCCCTGTCTCAATGAGGCTCCGAGCTCTGCCTGGCGGACATTCTCCTGCATAGACGCTTaGTTTTCAAAAGTACTTGAC +
Preference number: 5 (lower is better)
Translates to: SFSLPCLNEAPSSAWRTFSCIDA*FSKVLD
Trigger: GTCAAGTACTTTTGAAAACAAAGCGTCTATGCAGGA...GAATGTCCGCCAGGCAGAGCTCGGAGCCTCATTGAGACAGGGGAGAGAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGATGTCAAGGCCTGATTAAGCTTTTCCGGTaGCTTGTTCGGCAACGTTTG +
Preference number: 5 (lower is better)
Translates to: SGTLWHSQADMLLGCQGLIKLFR*LVRQRL
Trigger: CAAACGTTGCCGAACAAGCAACCGGAAAAGCTTAAT...CAGGCCTTGACATCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp ATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATGTCCCGCCACCGGGTTaGGAAGAAGGTACCTCCCAG +
Preference number: 5 (lower is better)
Translates to: MFYLMWWQFIQGVMFSQHVPPPG*EEGTSQ
Trigger: CTGGGAGGTACCTTCTTCCAAACCCGGTGGCGGGAC...ATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCTCCAGCGAGTCTCTTaGTTACAAAAATGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDLQRVS*LQKCCS
Trigger: AGAGCAGCATTTTTGTAACAAAGAGACTCGCTGGAG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS TCA 90 bp CAGCGGTGGCGCCTCCTGCATAGACGCTTTGTTTTCAAAAGTACTTaGCCTTTCCACAGCCTTCGGATAGACTTTCTTCTCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: QRWRLLHRRFVFKST*PFHSLRIDFLLSLF
Trigger: GAAGAGAGAGAGAAGAAAGTCTATCCGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAACAAAGCGTCTATGCAGGAGGCGCCACCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp ATTGATGTGAGTGATAAGATCTCCAGCCTTCAGTCCTGCCTGGCATaGCGGACTTCCTTCTTCTACATTCCAGACGATATGGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: IDVSDKISSLQSCLA*RTSFFYIPDDMVHC
Trigger: ACAGTGCACCATATCGTCTGGAATGTAGAAGAAGGAAGTCCGGCATGCCAGGCAGGACTGAAGGCTGGAGATCTTATCACTCACATCAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 90 bp TGTTATATGTTAGCACACTCTATTGTAACCATGACACACACTCCCTaGCAGCGTCCCGGTGATGACAGAGAGCCAAACCGAACCTCTCTA +
Preference number: 5 (lower is better)
Translates to: CYMLAHSIVTMTHTP*QRPGDDREPNRTSL
Trigger: TAGAGAGGTTCGGTTTGGCTCTCTGTCATCACCGGGACGCTGGCAGGGAGTGTGTGTCATGGTTACAATAGAGTGTGCTAACATATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS GCA 90 bp TATACTTCAGTGATTTTCCAGGGCCAGAAGCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGGGTGGAGGGGATAATATGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: YTSVIFQGQKPHLGC*ISETAWVEGIICGQ
Trigger: TTGACCACATATTATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGCCCTGGAAAATCACTGAAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000478569.1
CDS CCA 90 bp CCCGATGACAGGGATCTGTTCAAGCAGGAGAAACTTCGGCTGGTGTaGAGTAAAGGAGAAGGCTGCTTGGCTAGCTTTTTGAAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: PDDRDLFKQEKLRLV*SKGEGCLASFLKRD
Trigger: ATCTCTTTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTTACTCCACACCAGCCGAAGTTTCTCCTGCTTGAACAGATCCCTGTCATCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CCAAGGTCAGCCCCGGAATCTGTAGCCTTTCCCGCTGGGCTTTCATaGTTGTTATATGTTAGCACACTCTATTGTAACCATGACACACAC +
Preference number: 5 (lower is better)
Translates to: PRSAPESVAFPAGLS*LLYVSTLYCNHDTH
Trigger: GTGTGTGTCATGGTTACAATAGAGTGTGCTAACATATAACAACCATGAAAGCCCAGCGGGAAAGGCTACAGATTCCGGGGCTGACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CCA 90 bp CAACCCAGGGACTCACCTTCCAAGGGATCCTTATTGAGTCCCAGTTaGCTAATGATGTACCTGGGAATGTCGGTTTTAATACCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: QPRDSPSKGSLLSPS*LMMYLGMSVLIPCP
Trigger: AGGACAGGGTATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGGTGAGTCCCTGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp GTAGACATGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCGCTTGTTCGGCAACTTaGTGTTCGCCGAAGCCTGTT +
Preference number: 5 (lower is better)
Translates to: VDMVHHNYFMVTAGGRTSACSAT*CSPKPV
Trigger: AACAGGCTTCGGCGAACACAAAGTTGCCGAACAAGC...GGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCATGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCAAGAATCGATGCTGTTaGACTTCATATGCACCACCT +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVKNRCC*TSYAPP
Trigger: AGGTGGTGCATATGAAGTCAAACAGCATCGATTCTT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGAAGAGTTGGATGTaGATAGCTGTTGCATTTCAG +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVLKSWM*IAVAFQ
Trigger: CTGAAATGCAACAGCTATCAACATCCAACTCTTCAG...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACCTGAAGAGTTGGATGTaGATAGCTGTTGCATTTCAG +
Preference number: 5 (lower is better)
Translates to: ALPGGHSHTVLVLKGSQDLKSWM*IAVAFQ
Trigger: CTGAAATGCAACAGCTATCAACATCCAACTCTTCAG...GTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCTGAGTTTATGTCTGTaGCTTTCAGTATCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSLSLCL*LSVSEE
Trigger: CTCTTCAGATACTGAAAGCAACAGACATAAACTCAG...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTCGTTGAAATAGCCAGTTaGGGAAGTAGGCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: GYNWEGIWKKVPSLSFSLVEIAS*GSRPEL
Trigger: CAGTTCTGGCCTACTTCCCAAACTGGCTATTTCAAC...GAGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATTTCTTCACCACCACCTaGGCCTTCAGCTTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNFFTTT*AFSLSR
Trigger: CCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGAA...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CTCCGAGCTCTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTTCCTGCATAGACGCTTaGTTTTCAAAAGTACTTGAC +
Preference number: 5 (lower is better)
Translates to: LRALPGGHSHTVLVLKGSSCIDA*FSKVLD
Trigger: GTCAAGTACTTTTGAAAACAAAGCGTCTATGCAGGA...ACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAGAGCTCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACATCGATGTTGGCCAGCTaGCTGTCTAACTTTTCACAT +
Preference number: 5 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTSMLAS*LSNFSH
Trigger: ATGTGAAAAGTTAGACAGCAAGCTGGCCAACATCGA...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTAAGGAGAAAGCTCTCTaGCACTGGTGGTATCGTTCT +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSKEKAL*HWWYRS
Trigger: AGAACGATACCACCAGTGCAAGAGAGCTTTCTCCTT...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAATCTCTCTGTTGGGGATaGCTTTCCATGACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQSLCWG*LSMTVP
Trigger: TGGAACAGTCATGGAAAGCAATCCCCAACAGAGAGA...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCATCCCCCAAGAGAGTTaGGGTGCTAGATCAGTTATT +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVIPQES*GARSVI
Trigger: AATAACTGATCTAGCACCCAAACTCTCTTGGGGGAT...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS TCA 90 bp GTTCGGCAACTTTGTGTTCGCCGAAGCCTGTTCCCACTCCTCAAATaGGGCAAAGTAAAGTTTGAGAGCACAGTCCAAAAATTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: VRQLCVRRSLFPLLK*GKVKFESTVQKLGS
Trigger: TGACCCCAATTTTTGGACTGTGCTCTCAAACTTTACTTTGCCTCATTTGAGGAGTGGGAACAGGCTTCGGCGAACACAAAGTTGCCGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261569.11
ENST00000436277.5
ENST00000447738.1
CDS TCA 90 bp GAGGAATTATCTGTACTGTCCACACACTCGCTTCGTCCATTTATCTaGTCCAAGTGCTCTGAAAAACTGCCAACTGACAGGGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: EELSVLSTHSLRPFI*SKCSEKLPTDRVEL
Trigger: CAGCTCCACCCTGTCAGTTGGCAGTTTTTCAGAGCACTTGGATCAGATAAATGGACGAAGCGAGTGTGTGGACAGTACAGATAATTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS TCA 90 bp GAGGTATTCGACATAAACACAAAGAACAAAAACGAAGGTGTGCCATaGTACATGTCAGGCGGAGTCGGGGGAAGGATGGCTTACAGCTCT +
Preference number: 5 (lower is better)
Translates to: EVFDINTKNKNEGVP*YMSGGVGGRMAYSS
Trigger: AGAGCTGTAAGCCATCCTTCCCCCGACTCCGCCTGACATGTATCATGGCACACCTTCGTTTTTGTTCTTTGTGTTTATGTCGAATACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451144.1
CDS GCA 90 bp TTCTGTCTCAGCAAACTGTTCCAGTCTAAAGAACGGAAGAATCGATaGTGTTTGACTTCATATGCACCACCTGTTCCCAGCCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FCLSKLFQSKERKNR*CLTSYAPPVPSLSR
Trigger: CCTGGAGAGGCTGGGAACAGGTGGTGCATATGAAGTCAAACAGCATCGATTCTTCCGTTCTTTAGACTGGAACAGTTTGCTGAGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS GCA 90 bp TCAAGAGATGTCAGCTGCTTTCCTCAGGTTAACGGCAGTGCACACTaGACTGATTTTGTTAAAGGAACGAGGCTTGCAGCTCTGCATATC +
Preference number: 5 (lower is better)
Translates to: SRDVSCFPQVNGSAH*TDFVKGTRLAALHI
Trigger: GATATGCAGAGCTGCAAGCCTCGTTCCTTTAACAAAATCAGTGCAGTGTGCACTGCCGTTAACCTGAGGAAAGCAGCTGACATCTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CCA 90 bp GCATCGGCGTGTTCCTGCATCTGTTCTCAGTGGCGATGCTTTCGGTaGTACAGAAATGTTTTGATAAGAAGTGTAACTCGTCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: ASACSCICSQWRCFR*YRNVLIRSVTRLVL
Trigger: CAACACCAGACGAGTTACACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS-3UTR CAA 90 bp CATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAGCACAGTCCAAAAATaGGGGTCAGACATATCCATT +
Preference number: 5 (lower is better)
Translates to: HHNYFMVTAGGRTSRAASSTVQK*GSDISI
Trigger: AATGGATATGTCTGACCCCAATTTTTGGACTGTGCT...GCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp ATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCAGGGCTGCAAGCAAAGCAAATTAAGCTTTTCCGGTaGCTTGTTCGGCAACTTTGT +
Preference number: 5 (lower is better)
Translates to: IISWSQQAGERPGLQAKQIKLFR*LVRQLC
Trigger: ACAAAGTTGCCGAACAAGCAACCGGAAAAGCTTAAT...TTGCTTTGCTTGCAGCCCTGGACGTTCTCCCGCCTGCTGTGACCATGAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp AGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGTGGGGGAGAAATTTCTaGGACTATCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: RPWWDLSKQSRASSIIWWWGRNF*DYLEGY
Trigger: ATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCA...CCACCAGATTATTGAACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp AATTGCAACCCTTCTGGGACACTCTGGCATTCTCAGGCTGACATGCTTCTAGGATGGGGGAGAAATTTCTaGGACTATCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: NCNPSGTLWHSQADMLLGWGRNF*DYLEGY
Trigger: ATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCA...TCCTAGAAGCATGTCAGCCTGAGAATGCCAGAGTGTCCCAGAAGGGTTGCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp GAGGCCCTGGTGGGATTTATCCAAGCAATCTCGAGCCAGTTCAATAATCTGGTGGTAACTCGTCTGGTGTaGGTTGGTATGGTAACTGAT +
Preference number: 5 (lower is better)
Translates to: EALVGFIQAISSQFNNLVVTRLV*VGMVTD
Trigger: ATCAGTTACCATACCAACCAACACCAGACGAGTTAC...CACCAGATTATTGAACTGGCTCGAGATTGCTTGGATAAATCCCACCAGGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp TTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTGGAGTATCAAAATAACTaGTGTCATCCTCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: LKGSQDTVARSGRVSTVLEYQNN*CHPQIP
Trigger: TGGAATCTGAGGATGACACAAGTTATTTTGATACTC...CAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CTGCCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAAAAGGAGAAGGCTGCTaGGCTAGCTTTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: LPGGHSHTVLVLKGSQDTKGEGC*ASFLKR
Trigger: TCTTTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTT...TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTCATCGGAGAAGCTCCTaGGCCTGGGAGGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: KRSGYEMCGATRCSRNECHRRSS*AWEDFS
Trigger: GGAGAAGTCCTCCCAGGCCAAGGAGCTTCTCCGATG...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCATTAAGCTTTTCCGGTaGCTTGTTCGGCAACGTTTG +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLIKLFR*LVRQRL
Trigger: CAAACGTTGCCGAACAAGCAACCGGAAAAGCTTAAT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403666.5
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCATTAAGCTTTTCCGGTaGCTTGTTCGGCAAAAACTT +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVIKLFR*LVRQKL
Trigger: AAGTTTTTGCCGAACAAGCAACCGGAAAAGCTTAAT...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCACCTCCCCGACAGACTaGTCCCGATGGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASTSPTD*SRWLNV
Trigger: TACATTCAGCCATCGGGACAAGTCTGTCGGGGAGGT...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS CCA 90 bp GTGTATAGAAATCTGGGTGGGTCCTTCCCACAGAGAGGAGATTTTTaGAGTTGTCACTGGTTTTCGCAGTTTCTGGAAAGCACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: VYRNLGGSFPQRGDF*SCHWFSQFLESTVP
Trigger: TGGAACTGTGCTTTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTGTGGGAAGGACCCACCCAGATTTCTATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 90 bp CAGTCCTGTCATTTCTCCGTGCAAATGAAAAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGACTATCTTGAGGGCTATTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: QSCHFSVQMKNGLRH*GRNFLDYLEGYFLH
Trigger: ATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATTTTTCATTTGCACGGAGAAATGACAGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405643.5
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTGAGGTAACCAACAAGTaGTCTGGTTTCAAATCCCTG +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSEVTNK*SGFKSL
Trigger: CAGGGATTTGAAACCAGACAACTTGTTGGTTACCTC...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAAAAGAATCGATGCTGTTaGACTTCATATGCACCACCT +
Preference number: 5 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQKNRCC*TSYAPP
Trigger: AGGTGGTGCATATGAAGTCAAACAGCATCGATTCTT...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GTTTTGAAAGGTAGTCAAGACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCGAGTATCAAAATAACTaGTGTCATCCTCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: VLKGSQDTVARSGRVSTVEYQNN*CHPQIP
Trigger: TGGAATCTGAGGATGACACAAGTTATTTTGATACTC...GACTGTGGAGACCCGTCCTGAACGGGCGACTGTGTCTTGACTACCTTTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000403666.5
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTCAGTATCTGAAGAGTaGGATGTTGATAGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSSVSEE*DVDSCC
Trigger: GCAACAGCTATCAACATCCAACTCTTCAGATACTGA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCTGAGTTTATGTCTGTaGCTTTCAGTATCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVLSLCL*LSVSEE
Trigger: CTCTTCAGATACTGAAAGCAACAGACATAAACTCAG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCTGGCGGACATTCCCACACAGTGCTGGTTTTGAAAGGTAGTCAAGACACAGTCCTGGCTGGTCCAGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: PGGHSHTVLVLKGSQDTVLAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACTGGACCAGCCAG...GACTGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTGGGAATGTCCGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTGCTTGGCTAGCTTTTaGAAAAGAGATCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSCLASF*KRDLLL
Trigger: AAGGAGGAGATCTCTTTTCAAAAAGCTAGCCAAGCA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGTGAAGGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGAAAGGAGAAGGCTGCTaGGCTAGCTTTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: GEGQTSTSTERNNWPFRQKGEGC*ASFLKR
Trigger: TCTTTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTT...CTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCCTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTAAAGGAGAAGGCTGCTaGGCTAGCTTTTTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSKGEGC*ASFLKR
Trigger: TCTTTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTT...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGCCAGACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACTGTTTTCAAAAGTACTaGACCTTTCCACAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: GQTSTSTERNNWPFRQLDCFQKY*TFPQPS
Trigger: CGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAACA...GTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGTCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTCTTGTTTTCAAAAGTACTaGACCTTTCCACAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: RLQLGRHLEEGPLFVFLSCFQKY*TFPQPS
Trigger: CGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAACA...AGAGAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTCTGGTGGGTTGTGGCTaGGCGTCTAGAGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSLVGCG*ASRGAL
Trigger: CAGGGCTCCTCTAGACGCCAAGCCACAACCCACCAG...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp AGCTGGGAGTACTACCAAGGAGCACATCCTACAATCACACAGAGACTGACCAAACACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACA +
Preference number: 5 (lower is better)
Translates to: SWEYYQGAHPTITQRLTKHTVLV*KGSQDT
Trigger: TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTG...TTTGGTCAGTCTCTGTGTGATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCACACAGTGCTGGTTTaGAAAGGTAGTCAAGACACA +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSHTVLV*KGSQDT
Trigger: TGTGTCTTGACTACCTTTCAAAACCAGCACTGTGTG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp CCGACAGACTTGTCCCGATGGCTGAATGTAGGATTGGGTTATGACAACTGCCAACACACACACCCAGTTTaGACCATTTTGCTTCATTAC +
Preference number: 5 (lower is better)
Translates to: PTDLSRWLNVGLGYDNCQHTHPV*TILLHY
Trigger: GTAATGAAGCAAAATGGTCAAAACTGGGTGTGTGTG...TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCATCGGGACAAGTCTGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TCCTCAAAGGTCCAGCACTGTGTAATCCTAAAGCAGGCACACCCATTCTTATTTCAGAGAATCGCTCAGTaGAAACTTCCTCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSKVQHCVILKQAHPFLFQRIAQ*KLPLLG
Trigger: CCCCAGAAGAGGAAGTTTCAACTGAGCGATTCTCTG...AAATAAGAATGGGTGTGCCTGCTTTAGGATTACACAGTGCTGGACCTTTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452953.5
CDS CCA 90 bp GCTGTTGCATTTCAGAATATTCTGAACTCCAGCTCAGTGTTTCTGTaGATGGCAAGGTGGTGCTTTTGGTTTTGTCCACAGAGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: AVAFQNILNSSSVFL*MARWCFWFCPQSLP
Trigger: AGGAAGACTCTGTGGACAAAACCAAAAGCACCACCTTGCCATCCACAGAAACACTGAGCTGGAGTTCAGAATATTCTGAAATGCAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp ACATCCACATCCACAGAAAGGAACAACTGGCCTTTTAGACAGTTGGACCAGGGATGCTTGGCTAGCTTTTaGAAAAGAGATCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TSTSTERNNWPFRQLDQGCLASF*KRDLLL
Trigger: AAGGAGGAGATCTCTTTTCAAAAAGCTAGCCAAGCA...TCCCTGGTCCAACTGTCTAAAAGGCCAGTTGTTCCTTTCTGTGGATGTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp AGCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCGATGTCGGGCTGAGTaGAAATGGCTCTTCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SFGYVLFNVVAIHPRGDVRCRAE*KWLFGG
Trigger: GCCTCCGAAGAGCCATTTCAACTCAGCCCGACATCG...AACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS TCA 90 bp TCGCCGAAGCCTGTTCCCACTCCTCAAATGAGGCAAAGTAAAGTTTaGGAGCACAGTCCAAAAATTGGGGTCAGACATATCCATTTCTTT +
Preference number: 5 (lower is better)
Translates to: SPKPVPTPQMRQSKV*EHSPKIGVRHIHFF
Trigger: AAAGAAATGGATATGTCTGACCCCAATTTTTGGACTGTGCTCTCAAACTTTACTTTGCCTCATTTGAGGAGTGGGAACAGGCTTCGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261569.11
ENST00000436277.5
ENST00000447738.1
CDS GCA 90 bp AATATTCTGAACTCCAGCTCAGTGTTTCTGTGGATGGCAAGGTGGTaGTTTTGGTTTTGTCCACAGAGTCTTCCTTCTCTTCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: NILNSSSVFLWMARW*FWFCPQSLPSLLLN
Trigger: ATTCAGCAGAAGAGAAGGAAGACTCTGTGGACAAAACCAAAAGCACCACCTTGCCATCCACAGAAACACTGAGCTGGAGTTCAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTATCTAATTTGTGCTGTAATTCAAGGAAGTATCGTGAGGTGATGAGGCCCTGGAGCTTTTCCGGTTGCTaGTTCGGCAACTTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSNLCCNSRKYREVMRPWSFSGC*FGNFVF
Trigger: GAACACAAAGTTGCCGAACAAGCAACCGGAAAAGCT...CCAGGGCCTCATCACCTCACGATACTTCCTTGAATTACAGCACAAATTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp GTAGACATGGTTCATCATAATTATTTCATGGTCACAGCAGGCGGGAGAACGTCCATTTCTTGGACTATCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: VDMVHHNYFMVTAGGRTSISWTI*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAAT...GGACGTTCTCCCGCCTGCTGTGACCATGAAATAATTATGATGAACCATGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447738.1
CDS-3UTR CAA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTCCTTCTCAGGCCAGTaGATCTCATCACTGATGACT +
Preference number: 5 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASSFSGQ*ISSLMT
Trigger: AGTCATCAGTGATGAGATCAACTGGCCTGAGAAGGA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TTACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCTGAGTTTATGTCTGTaGCTTTCAGTATCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LPVTTGKASGRRSPLCLSLSLCL*LSVSEE
Trigger: CTCTTCAGATACTGAAAGCAACAGACATAAACTCAG...AGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS-3UTR CAA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCGAAGCCACATCTGGGTaGCTGCATTTCCGAAACGGC +
Preference number: 5 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLEATSG*LHFRNG
Trigger: GCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTC...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432817.5
CDS-3UTR CAA 90 bp TACCGGTTACAACTGGGAAGGCATCTGGAAGAAGGTCCCCTCTTTGTCTTTCTCACGTTGAGACCAGTTTaGAAATCCATTAGTAAACTC +
Preference number: 5 (lower is better)
Translates to: YRLQLGRHLEEGPLFVFLTLRPV*KSISKL
Trigger: GAGTTTACTAATGGATTTCAAAACTGGTCTCAACGT...GAGAAAGACAAAGAGGGGACCTTCTTCCAGATGCCTTCCCAGTTGTAACCGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGGACTCAGCTCCTTTTTaGAAGCAGCTGGGTCCACTA +
Preference number: 5 (lower is better)
Translates to: DMFYLMWWQFIQGVMFSQDSAPF*KQLGPL
Trigger: TAGTGGACCCAGCTGCTTCAAAAAAGGAGCTGAGTC...CTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS-3UTR CAA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATGTAACTCGTCTGGTGTaGGTTGGTATGGTAACTGAT +
Preference number: 5 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNVTRLV*VGMVTD
Trigger: ATCAGTTACCATACCAACCAACACCAGACGAGTTAC...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATCCAAGGGATCCTTATaGAGTCCCAGTTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: SQDPFYGYFLQIATSPQISKGSL*SPSWLM
Trigger: CATTAGCCAACTGGGACTCAATAAGGATCCCTTGGA...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATGAGGTAACCAACAAGTaGTCTGGTTTCAAATCCCTG +
Preference number: 5 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNEVTNK*SGFKSL
Trigger: CAGGGATTTGAAACCAGACAACTTGTTGGTTACCTC...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TTTAAGCTGGTAAATCTACAGCTGGGAGTACTACCAAGGAGCACATCCTACAATTGGCTGAATGTAGGATaGGGTTATGACAACTGCCAA +
Preference number: 5 (lower is better)
Translates to: FKLVNLQLGVLPRSTSYNWLNVG*GYDNCQ
Trigger: TTGGCAGTTGTCATAACCCAATCCTACATTCAGCCA...ATTGTAGGATGTGCTCCTTGGTAGTACTCCCAGCTGTAGATTTACCAGCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCTGGGAGTGAGACGTTaGACCAAGCAATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: LDMFYLMWWQFIQGVMFSLGVRR*TKQFHF
Trigger: GAAGTGGAATTGCTTGGTCAAACGTCTCACTCCCAG...GGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CAA 90 bp TCATGCTCATTCGTGTCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAGTAACTCGTCTGGTGTaGGTTGGTATGGTAACTGAT +
Preference number: 5 (lower is better)
Translates to: SCSFVSQDPFYGYFLQIAVTRLV*VGMVTD
Trigger: ATCAGTTACCATACCAACCAACACCAGACGAGTTAC...TGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGACACGAATGAGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGAATACCCTGTCCTTCTTaGGCATGGCCTTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRIPCPS*AWPSAA
Trigger: AGCAGCAGAAGGCCATGCCAAAGAAGGACAGGGTAT...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp AAGAGATCAGGTTATGAAATGTGTGGAGCTACTAGATGCAGCAGAAATGAATGTTCCAAGGGATCCTTATaGAGTCCCAGTTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: KRSGYEMCGATRCSRNECSKGSL*SPSWLM
Trigger: CATTAGCCAACTGGGACTCAATAAGGATCCCTTGGA...ACATTCATTTCTGCTGCATCTAGTAGCTCCACACATTTCATAACCTGATCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp TTGTACAAACACTATCTGGTAACAGTTTTACCGGTTACAACTGGGAAGGCATCTTCGATGTTGGCCAGCTaGCTGTCTAACTTTTCACAT +
Preference number: 5 (lower is better)
Translates to: LYKHYLVTVLPVTTGKASSMLAS*LSNFSH
Trigger: ATGTGAAAAGTTAGACAGCAAGCTGGCCAACATCGA...AGATGCCTTCCCAGTTGTAACCGGTAAAACTGTTACCAGATAGTGTTTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000443808.1
CDS-3UTR CAA 90 bp TTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCATGTTCTCCCAGCATTaGGACACACAGGGAGAATTC +
Preference number: 5 (lower is better)
Translates to: LDMFYLMWWQFIQGVMFSMFSQH*DTQGEF
Trigger: GAATTCTCCCTGTGTGTCCAAATGCTGGGAGAACAT...GGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS-3UTR CAA 90 bp TCTCAGGACCCATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATAATTTCTTGGACTATCTaGAGGGCTATTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: SQDPFYGYFLQIATSPQIISWTI*RAISCM
Trigger: CATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAAT...TATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAATGGGTCCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCCTGGCTGGTCCAGTTTaGATTGATGTGTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASLAGPV*IDVFSN
Trigger: ATTTGAAAACACATCAATCAAAACTGGACCAGCCAG...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CTAGATGCAGCAGAAATGAATGTGAAACCCAGGAACTTGCTAAAAACAGCAAGCTCCTGCATAGACGCTTaGTTTTCAAAAGTACTTGAC +
Preference number: 5 (lower is better)
Translates to: LDAAEMNVKPRNLLKTASSCIDA*FSKVLD
Trigger: GTCAAGTACTTTTGAAAACAAAGCGTCTATGCAGGA...GCTTGCTGTTTTTAGCAAGTTCCTGGGTTTCACATTCATTTCTGCTGCATCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp CTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCAATAGATAGACTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGG +
Preference number: 5 (lower is better)
Translates to: LFPSNSNQSPNMDLSIDRLIESQ*ANDVPG
Trigger: CCCAGGTACATCATTAGCCAACTGGGACTCAATAAG...TCTATCTATTGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGAAGGAGAAAGCTCTCTaGCACTGGTGGTATCGTTCT +
Preference number: 5 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKKEKAL*HWWYRS
Trigger: AGAACGATACCACCAGTGCAAGAGAGCTTTCTCCTT...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp ATTTTATGGCTATTTCCTTCAAATAGCAACCAGTCCCCAAATATGGACTTATCACTTGTTCGGCAACGTTaGACCAAGCAATTCCACTTC +
Preference number: 5 (lower is better)
Translates to: ILWLFPSNSNQSPNMDLSLVRQR*TKQFHF
Trigger: GAAGTGGAATTGCTTGGTCAAACGTTGCCGAACAAG...TGATAAGTCCATATTTGGGGACTGGTTGCTATTTGAAGGAAATAGCCATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS-3UTR CAA 90 bp GTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTTTTTCTCTCACTTCTCTaGTCTATTACCCAGTCACAA +
Preference number: 5 (lower is better)
Translates to: VLFNVVAIHPRGDVLPAFFLSLL*SITQSQ
Trigger: TTGTGACTGGGTAATAGACAAGAGAAGTGAGAGAAA...AAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR CAA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCTCATAACAGCATCTaGCCTAGAAAGCAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFSHNSI*PRKQFL
Trigger: GAGAAACTGCTTTCTAGGCAAGATGCTGTTATGAGA...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS GCA 90 bp CATCATATAAGTAGCAGTCACACACTCCAAAAACAAGACTGTGGGTaGAAGGCTATGCCTCTAAGAAAACAATATCTTAATTTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: HHISSSHTLQKQDCG*KAMPLRKQYLNLWR
Trigger: TCTCCACAAATTAAGATATTGTTTTCTTAGAGGCATAGCCTTGCACCCACAGTCTTGTTTTTGGAGTGTGTGACTGCTACTTATATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485768.1
CDS-3UTR CAA 90 bp CTTAGTATTTATATCAGCAAGTGCCATCTTACAATACAAAACAAGCCACCAAAGTGGGGGAGAAATTTCTaGGACTATCTTGAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: LSIYISKCHLTIQNKPPKWGRNF*DYLEGY
Trigger: ATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCA...CTTTGGTGGCTTGTTTTGTATTGTAAGATGGCACTTGCTGATATAAATACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS-3UTR CAA 90 bp GCTTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTTTCTCTCACTTCTCTaGTCTATTACCCAGTCACAA +
Preference number: 5 (lower is better)
Translates to: ALDMFYLMWWQFIQGVMFFLSLL*SITQSQ
Trigger: TTGTGACTGGGTAATAGACAAGAGAAGTGAGAGAAA...GAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR CAA 90 bp TTTGGATATGTTTTATTTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCTCTCATAACAGCATCTaGCCTAGAAAGCAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: FGYVLFNVVAIHPRGDVLSHNSI*PRKQFL
Trigger: GAGAAACTGCTTTCTAGGCAAGATGCTGTTATGAGA...GAGAACATCACCCCTTGGATGAATTGCCACCACATTAAATAAAACATATCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411628.5
ENST00000432817.5
CDS-3UTR CAA 90 bp GGAGAGGTTTACAACAACAAACATGTAATACATGAATGCAACCTTAAGTACTCTCAAACAGAAAGAAAGTaGATGTGTGTTTATAGTCCC +
Preference number: 5 (lower is better)
Translates to: GEVYNNKHVIHECNLKYSQTERK*MCVYSP
Trigger: GGGACTATAAACACACATCAACTTTCTTTCTGTTTG...AGAGTACTTAAGGTTGCATTCATGTATTACATGTTTGTTGTTGTAAACCTCTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS CCA 72 bp GCGGCGACCAGCGCAGAGGCTGGAGTCCGGCTGCCGTaGCCACTGCAGCCGCGGGGCACCGGCTCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: AATSAEAGVRLP*PLQPRGTGSGA
Trigger: GGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 72 bp CCGCGCGCGGGGACATGCCCGCTCGGGTCCGCGATCTaGGCTCCACTGTGCTCCCGCGCTGCACCCGAGCCG +
Preference number: 6 (lower is better)
Translates to: PRAGTCPLGSAI*APLCSRAAPEP
Trigger: CGGCTCGGGTGCAGCGCGGGAGCACAGTGGAGCGCAGATCGCGGACCCGAGCGGGCATGTCCCCGCGCGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS TCA 72 bp CCCAGGGTGCCTCCCAACGGCGGCGGCGGCGGCGGCTaGTGCTCTCTGGAGAAGCCGCCGGGCTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: PRVPPNGGGGGG*CSLEKPPGSPS
Trigger: GGAAGGGGAGCCCGGCGGCTTCTCCAGAGAGCATCAGCCGCCGCCGCCGCCGCCGTTGGGAGGCACCCTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 72 bp GCGGGGGCCCGTCTGAAGTCCCCGCCACCCTGGCGGTaGTCCGCAGGCACCCGGCCATCCGACATCGCACCC +
Preference number: 6 (lower is better)
Translates to: AGARLKSPPPWR*SAGTRPSDIAP
Trigger: GGGTGCGATGTCGGATGGCCGGGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp AGGACGCGGCGACCAGCGCAGAGGCTGGAGTCCGGCTaGCGTGGCCACTGCAGCCGCGGGGCACCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: RTRRPAQRLESG*RGHCSRGAPAL
Trigger: CAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGCGTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS CCA 72 bp AGCACCCGGAGAGGACGCGGCGACCAGCGCAGAGGCTaGAGTCCGGCTGCCGTGGCCACTGCAGCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: STRRGRGDQRRG*SPAAVATAAAG
Trigger: CCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGGTCGCCGCGTCCTCTCCGGGTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 72 bp CCAGCGCAGAGGCTGGAGTCCGGCTGCCGTGGCCACTaGAGCCGCGGGGCACCGGCTCTGGCGCCTCCGAAA +
Preference number: 6 (lower is better)
Translates to: PAQRLESGCRGH*SRGAPALAPPK
Trigger: TTTCGGAGGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGCCGGACTCCAGCCTCTGCGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 72 bp GCGAGGGCGCCGACTGGCCCAGGGCCTGGCTGCGCATaGGCACGAGGTTGGACGTCTCTGCAGAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ARAPTGPGPGCA*ARGWTSLQRPA
Trigger: GGCCGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCCCTGGGCCAGTCGGCGCCCTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000432817.5
ENST00000451144.1
ENST00000452953.5
CDS CCA 72 bp CCAGGAGCGGGGGCCCGTCTGAAGTCCCCGCCACCCTaGCGGTGCTCCGCAGGCACCCGGCCATCCGACATC +
Preference number: 6 (lower is better)
Translates to: PGAGARLKSPPP*RCSAGTRPSDI
Trigger: GATGTCGGATGGCCGGGTGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTCCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GCGCACTCAGCGCCTCCCGGGGAAGACGCGGGCTCCTaGGCTCAGGCTCACTGGCACTGCCGCTCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: AHSAPPGEDAGS*AQAHWHCRSRA
Trigger: AGCCCGGGAGCGGCAGTGCCAGTGAGCCTGAGCCCAGGAGCCCGCGTCTTCCCCGGGAGGCGCTGAGTGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS TCA 72 bp GACCATCCTGGAGGGTGCCAGGAGCGGGGGCCCGTCTaGAGTCCCCGCCACCCTGGCGGTGCTCCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: DHPGGCQERGPV*SPRHPGGAPQA
Trigger: TGCCTGCGGAGCACCGCCAGGGTGGCGGGGACTTCAGACGGGCCCCCGCTCCTGGCACCCTCCAGGATGGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp CCCACCTTCCGGGAGACTGGGCGTTTCAGGCAGCCTTaGTCCACTGGCCGGGCGCGGCTGAGCGGCGGCACG +
Preference number: 6 (lower is better)
Translates to: PTFRETGRFRQP*STGRARLSGGT
Trigger: CGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCGGGAGACTGGGCGTTTCAGGCAGCCTTGCTCCACTaGCCGGGCGCGGCTGAGCGGCGGCACGTCGCACAC +
Preference number: 6 (lower is better)
Translates to: PGDWAFQAALLH*PGAAERRHVAH
Trigger: GTGTGCGACGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp CTCCTGGCGGCCCACCTTCCGGGAGACTGGGCGTTTCAGGCAGCCTaGCTCCACTGGCCGGGCGCGGCTGAGCGGCGGCACGTCGCACAC +
Preference number: 6 (lower is better)
Translates to: LLAAHLPGDWAFQAA*LHWPGAAERRHVAH
Trigger: GTGTGCGACGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGGCCGCCAGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GGCCTGGCTGCGCATGCGCACGAGGTTGGACGTCTCTaGAGAGGCCGGCCAGGCCTGTCCCGCCACCGGGTT +
Preference number: 6 (lower is better)
Translates to: GLAAHAHEVGRL*RGRPGLSRHRV
Trigger: AACCCGGTGGCGGGACAGGCCTGGCCGGCCTCTGCAGAGACGTCCAACCTCGTGCGCATGCGCAGCCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000432817.5
ENST00000451144.1
ENST00000452953.5
CDS CCA 72 bp CCTGGGGGCTCGAGCTGGGCTCTGCAGTGCTGGGCTTaGCCCCCGGCTCTCTGCCAGAAGCGTGGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PGGSSWALQCWA*PPALCQKRGLG
Trigger: CCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCAGCTCGAGCCCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp CTGGGCTCAGGCTCACTGGCACTGCCGCTCCCGGGCTaGAGGGAGCCCCGCCAGCGACTACATGGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: LGSGSLALPLPG*REPRQRLHGSD
Trigger: GTCACTGCCATGTAGTCGCTGGCGGGGCTCCCTGCAGCCCGGGAGCGGCAGTGCCAGTGAGCCTGAGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS CCA 72 bp CGGTGGCAGTCACCGAGAGAGCCCTGTCCCGGTGGCTaGCCCCGCCCATGGTGTTTGGGTCGGGGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: RWQSPREPCPGG*PRPWCLGRGGV
Trigger: CACACCACCCCGACCCAAACACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCTCTCGGTGACTGCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCTACGGTGGCAGTCACCGAGAGAGCCCTGTCCCGGTaGCTGGCCCCGCCCATGGTGTTTGGGTCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: PTVAVTERALSR*LAPPMVFGSGW
Trigger: CCACCCCGACCCAAACACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCTCTCGGTGACTGCCACCGTAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp TCCTGGGGGCTCGAGCTGGGCTCTGCAGTGCTGGGCTaGGCCCCCGGCTCTCTGCCAGAAGCGTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: SWGLELGSAVLG*APGSLPEAWLG
Trigger: CCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCAGCTCGAGCCCCCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp CTGGGGGCTGGAAGCTCCAGCATGCCCCCGGCGGCCTaGGCAGAAGAGGTGTCGCTGCTGGCTGCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: LGAGSSSMPPAA*AEEVSLLAAEA
Trigger: GGCCTCTGCAGCCAGCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCATGCTGGAGCTTCCAGCCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp GAGCCCTGTCCCGGTGGCTGGCCCCGCCCATGGTGTTaGGGTCGGGGTGGTGTGACTCCAGAGGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: EPCPGGWPRPWC*GRGGVTPEAGW
Trigger: CCACCCTGCCTCTGGAGTCACACCACCCCGACCCAAACACCATGGGCGGGGCCAGCCACCGGGACAGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp GTTTCAGGCAGCCTTGCTCCACTGGCCGGGCGCGGCTaGGCGGCGGCACGTCGCACACGTTCTCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: VSGSLAPLAGRG*AAARRTRSHPG
Trigger: GCCTGGATGAGAACGTGTGCGACGTGCCGCCGCTCAGCCGCGCCCGGCCAGTGGAGCAAGGCTGCCTGAAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp GGGCTGCAGGGAGCCCCGCCAGCGACTACATGGCAGTaGCGGGGCCGCAGGAGCCCGCTGCTAAGTTCACAG +
Preference number: 6 (lower is better)
Translates to: GLQGAPPATTWQ*RGRRSPLLSSQ
Trigger: CTGTGAACTTAGCAGCGGGCTCCTGCGGCCCCGTCACTGCCATGTAGTCGCTGGCGGGGCTCCCTGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS TCA 72 bp GAAGCCGCCGGGCTCCCCTTCCTCCGACAGAGTTTCTaGGCCCGAGGAGGACTCGGCCGAGGAAGCACCCGG +
Preference number: 6 (lower is better)
Translates to: EAAGLPFLRQSF*ARGGLGRGSTR
Trigger: CCGGGTGCTTCCTCGGCCGAGTCCTCCTCGGGCTCAGAAACTCTGTCGGAGGAAGGGGAGCCCGGCGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS GCA 72 bp TCATCCAGGCTCTGCAGCGGCGCCTCCCGCTGGGACTaGTCCCGCTGCACCTCCTCTTGGGTCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSRLCSGASRWD*SRCTSSWVTSR
Trigger: CCTGGAGGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CGGTACCGCTGCCCGCCGAGTTTGGGTGCAAGACCGTaGAGAGTGCTGGGCCGGATGTGCCCGGACCCTGCT +
Preference number: 6 (lower is better)
Translates to: RYRCPPSLGARP*RVLGRMCPDPA
Trigger: AGCAGGGTCCGGGCACATCCGGCCCAGCACTCTCCACGGTCTTGCACCCAAACTCGGCGGGCAGCGGTACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GTCCACAGACTCCTGGCGGCCCACCTTCCGGGAGACTaGGCGTTTCAGGCAGCCTTGCTCCACTGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: VHRLLAAHLPGD*AFQAALLHWPG
Trigger: GCCCGGCCAGTGGAGCAAGGCTGCCTGAAACGCCCAGTCTCCCGGAAGGTGGGCCGCCAGGAGTCTGTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCGCAGGCACCCGGCCATCCGACATCGCACCCTCGCTaGCGCGCACGCTGGCCTGCTTGTGAAGAGCATCCT +
Preference number: 6 (lower is better)
Translates to: PQAPGHPTSHPR*RARWPACEEHP
Trigger: AGGATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGTCGGATGGCCGGGTGCCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGGCTTGGCCCCCGGCTCTCTGCCAGAAGCGTGGCTTaGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GLGPRLSARSVA*GTAMLPGSRAG
Trigger: TCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GTGCTGGGCTTGGCCCCCGGCTCTCTGCCAGAAGCGTaGCTTGGGGAACTGCAATGCTGCCTGGCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: VLGLAPGSLPEA*LGELQCCLAAG
Trigger: CCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCGAGAGAGCCCTGTCCCGGTGGCTGGCCCCGCCCATaGTGTTTGGGTCGGGGTGGTGTGACTCCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PREPCPGGWPRP*CLGRGGVTPEA
Trigger: TGCCTCTGGAGTCACACCACCCCGACCCAAACACCATGGGCGGGGCCAGCCACCGGGACAGGGCTCTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TGGCGCCTCCGAAACTTTCTCCCCCATTTCCCTGTCTaGCCCAAAGTGCCTCCCGAGCGGCGGGGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: WRLRNFLPHFPV*PKVPPERRGRG
Trigger: GCCGCGCCCCCGCCGCTCGGGAGGCACTTTGGGCCAGACAGGGAAATGGGGGAGAAAGTTTCGGAGGCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS CCA 72 bp GCTGCCGTGGCCACTGCAGCCGCGGGGCACCGGCTCTaGCGCCTCCGAAACTTTCTCCCCCATTTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: AAVATAAAGHRL*RLRNFLPHFPV
Trigger: GACAGGGAAATGGGGGAGAAAGTTTCGGAGGCGCCAGAGCCGGTGCCCCGCGGCTGCAGTGGCCACGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS CAA 72 bp TGGGCTTGGCCCCCGGCTCTCTGCCAGAAGCGTGGCTaGGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: WAWPPALCQKRG*GNCNAAWQPGW
Trigger: CCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp CTGCAGCGGCGCCTCCCGCTGGGACTGCTCCCGCTGCACCTCCTCTaGGGTCACCTCCAGGCTGTGCTTGCGGGAGCACAGGTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LQRRLPLGLLPLHLL*GHLQAVLAGAQVLL
Trigger: AAGAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GAAACTTTCTCCCCCATTTCCCTGTCTGGCCCAAAGTaGCTCCCGAGCGGCGGGGGCGCGGCGCGCACTCAG +
Preference number: 6 (lower is better)
Translates to: ETFSPISLSGPK*LPSGGGAARTQ
Trigger: CTGAGTGCGCGCCGCGCCCCCGCCGCTCGGGAGGCACTTTGGGCCAGACAGGGAAATGGGGGAGAAAGTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403625.6
ENST00000406374.5
CDS CCA 72 bp ACGTTCTCATCCAGGCTCTGCAGCGGCGCCTCCCGCTaGGACTGCTCCCGCTGCACCTCCTCTTGGGTCACC +
Preference number: 6 (lower is better)
Translates to: TFSSRLCSGASR*DCSRCTSSWVT
Trigger: GGTGACCCAAGAGGAGGTGCAGCGGGAGCAGTCCCAGCGGGAGGCGCCGCTGCAGAGCCTGGATGAGAACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GAGATGCCCCTGTCGAGGGAGTGGCAGAGACCATCCTaGAGGGTGCCAGGAGCGGGGGCCCGTCTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: EMPLSREWQRPS*RVPGAGARLKS
Trigger: GGACTTCAGACGGGCCCCCGCTCCTGGCACCCTCCAGGATGGTCTCTGCCACTCCCTCGACAGGGGCATCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCTTCCCCCTTCCCAGAGATGCCCCTGTCGAGGGAGTaGCAGAGACCATCCTGGAGGGTGCCAGGAGCGGGG +
Preference number: 6 (lower is better)
Translates to: PSPFPEMPLSRE*QRPSWRVPGAG
Trigger: CCCCGCTCCTGGCACCCTCCAGGATGGTCTCTGCCACTCCCTCGACAGGGGCATCTCTGGGAAGGGGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp GGCTGCAGAGACCGCCTGGCAAGAAGCGCTTCGGGCTaGGGTTCCACGCCACGCCTCACCTTGCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GCRDRLARSASG*GSTPRLTLPSS
Trigger: GGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp CTGCAATGCTGCCTGGCAGCCGGGCTGGACAGGTCTTaGGCCGTCAGAGGGGGCGGAGGGATGCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LQCCLAAGLDRS*AVRGGGGMLLG
Trigger: TCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp CTGCAGTGCTGGGCTTGGCCCCCGGCTCTCTGCCAGAAGCGTGGCTaGGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGGACAGGTCTT +
Preference number: 6 (lower is better)
Translates to: LQCWAWPPALCQKRG*GNCNAAWQPGWTGL
Trigger: AAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TGGGCTCTGCAGTGCTGGGCTTGGCCCCCGGCTCTCTaGCAGAAGCGTGGCTTGGGGAACTGCAATGCTGCC +
Preference number: 6 (lower is better)
Translates to: WALQCWAWPPAL*QKRGLGNCNAA
Trigger: GGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGAGCCGGGGGCCAAGCCCAGCACTGCAGAGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp CCCGGCGGCCTTGGCAGAAGAGGTGTCGCTGCTGGCTaGAGAGGCCTCTCTAACTCCGGCCCTGGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: PGGLGRRGVAAG*RGLSNSGPGFR
Trigger: CCTGAAACCAGGGCCGGAGTTAGAGAGGCCTCTGCAGCCAGCAGCGACACCTCTTCTGCCAAGGCCGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGCCATCCGACATCGCACCCTCGCTGGCGCGCACGCTaGCCTGCTTGTGAAGAGCATCCTTCAGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GHPTSHPRWRAR*PACEEHPSAGC
Trigger: GCAGCCTGCTGAAGGATGCTCTTCACAAGCAGGCCAGCGTGCGCGCCAGCGAGGGTGCGATGTCGGATGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CTCCTGCTGCCCACCCGTGGGTCGGACTGGGTTCCCTaGCAGGCATTCGTGGGAGCCAGCTGTCATCTTGGG +
Preference number: 6 (lower is better)
Translates to: LLLPTRGSDWVP*QAFVGASCHLG
Trigger: CCCAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGGGAACCCAGTCCGACCCACGGGTGGGCAGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GCTGCAGAGACCGCCTGGCAAGAAGCGCTTCGGGCTTaGGTTCCACGCCACGCCTCACCTTGCCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: AAETAWQEALRA*VPRHASPCPAP
Trigger: AGGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GTCCGCTGGCTCACTAGGCCCTGGGTGTCCCGGCCTTaGCAAATGCACAGGCTTCTCCAGCACCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: VRWLTRPWVSRP*QMHRLLQHLQG
Trigger: CCCCTGGAGGTGCTGGAGAAGCCTGTGCATTTGCCAAGGCCGGGACACCCAGGGCCTAGTGAGCCAGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp AGGCTGAGCCTTCCTATGGTCCCTGTTGCTGGGGGCTaGAAGCTCCAGCATGCCCCCGGCGGCCTTGGCAGA +
Preference number: 6 (lower is better)
Translates to: RLSLPMVPVAGG*KLQHAPGGLGR
Trigger: TCTGCCAAGGCCGCCGGGGGCATGCTGGAGCTTCCAGCCCCCAGCAACAGGGACCATAGGAAGGCTCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CTGGGGCAGGGTCCTTCCCTTTGGTTTCCCCTACGGTaGCAGTCACCGAGAGAGCCCTGTCCCGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LGQGPSLWFPLR*QSPREPCPGGW
Trigger: CCAGCCACCGGGACAGGGCTCTCTCGGTGACTGCCACCGTAGGGGAAACCAAAGGGAAGGACCCTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp ACCTCCAGGGGCCGCCCACCACTGGTGGGTTGTGGCTaGGCGTCTAGAGGAGCCCTGTCAGTGTGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: TSRGRPPLVGCG*ASRGALSVCSG
Trigger: CCCACTGCACACTGACAGGGCTCCTCTAGACGCCAAGCCACAACCCACCAGTGGTGGGCGGCCCCTGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp CCAGTGGCTGAGGGGGACCGTTTCATGCCATTGGGCTaGTCTGCCTCCGTCGGTGGCTTCTGGGGACCGGGC +
Preference number: 6 (lower is better)
Translates to: PVAEGDRFMPLG*SASVGGFWGPG
Trigger: GCCCGGTCCCCAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp TGGGAGGGCCTCTTTCAGACGATTCCCTCAGGCCTGGCTTCTCCCTaGAGGGGGAAGCTTCAGGTGGGAGCGGGCAGCGTGGCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: WEGLFQTIPSGLASP*RGKLQVGAGSVAWP
Trigger: TGGCCAGGCCACGCTGCCCGCTCCCACCTGAAGCTTCCCCCTCAAGGGAGAAGCCAGGCCTGAGGGAATCGTCTGAAAGAGGCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp TCCCTGTTGCTGGGGGCTGGAAGCTCCAGCATGCCCCCGGCGGCCTaGGCAGAAGAGGTGTCGCTGCTGGCTGCAGAGGCCTCTCTAACT +
Preference number: 6 (lower is better)
Translates to: SLLLGAGSSSMPPAA*AEEVSLLAAEASLT
Trigger: AGTTAGAGAGGCCTCTGCAGCCAGCAGCGACACCTCTTCTGCCAAGGCCGCCGGGGGCATGCTGGAGCTTCCAGCCCCCAGCAACAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GCTGGCCGCTCCGCGCCTTTCAACCGGTTCTCGCTATaGACAAAGGAAAGGCCGGCCTCGAGCTTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: AGRSAPFNRFSL*TKERPASSLSP
Trigger: GGGCGACAAGCTCGAGGCCGGCCTTTCCTTTGTGCATAGCGAGAACCGGTTGAAAGGCGCGGAGCGGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TTCAGCTTGTCGCGGTCCAGGTCGTCCACAGACTCCTaGCGGCCCACCTTCCGGGAGACTGGGCGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: FSLSRSRSSTDS*RPTFRETGRFR
Trigger: CCTGAAACGCCCAGTCTCCCGGAAGGTGGGCCGCCAGGAGTCTGTGGACGACCTGGACCGCGACAAGCTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCCGTGGGTCGGACTGGGTTCCCTGGCAGGCATTCGTaGGAGCCAGCTGTCATCTTGGGCTTCAGCACAGGG +
Preference number: 6 (lower is better)
Translates to: PVGRTGFPGRHS*EPAVILGFSTG
Trigger: CCCTGTGCTGAAGCCCAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGGGAACCCAGTCCGACCCACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp ATGCCATTGGGCTTGTCTGCCTCCGTCGGTGGCTTCTaGGGACCGGGCCCTTTCCCTCTGGCCTCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: MPLGLSASVGGF*GPGPFPLASGK
Trigger: CTTCCCTGAGGCCAGAGGGAAAGGGCCCGGTCCCCAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CCGTTTCATGCCATTGGGCTTGTCTGCCTCCGTCGGTaGCTTCTGGGGACCGGGCCCTTTCCCTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: PFHAIGLVCLRR*LLGTGPFPSGL
Trigger: GAGGCCAGAGGGAAAGGGCCCGGTCCCCAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGCATGAAACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp CTTGGGGAACTGCAATGCTGCCTGGCAGCCGGGCTGGACAGGTCTTaGGCCGTCAGAGGGGGCGGAGGGATGCTGCTGGGATGCCTTTGT +
Preference number: 6 (lower is better)
Translates to: LGELQCCLAAGLDRS*AVRGGGGMLLGCLC
Trigger: ACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp GAACTCTGCCCAGTGGCTGAGGGGGACCGTTTCATGCCATTGGGCTaGTCTGCCTCCGTCGGTGGCTTCTGGGGACCGGGCCCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: ELCPVAEGDRFMPLG*SASVGGFWGPGPFP
Trigger: AGGGAAAGGGCCCGGTCCCCAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp CTCTTTGTCATGTGGGTTCGGCCCTCCCCGGCAGGCTaGGCCTTCCTATGGTCCCTGTTGCTGGGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: LFVMWVRPSPAG*AFLWSLLLGAG
Trigger: TCCAGCCCCCAGCAACAGGGACCATAGGAAGGCTCAGCCTGCCGGGGAGGGCCGAACCCACATGACAAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TCCCGCTGCACCTCCTCTTGGGTCACCTCCAGGCTGTaGTTGCGGGAGCACAGGTGCTTCTTGTCACTGCCG +
Preference number: 6 (lower is better)
Translates to: SRCTSSWVTSRL*LREHRCFLSLP
Trigger: CGGCAGTGACAAGAAGCACCTGTGCTCCCGCAAGCACAGCCTGGAGGTGACCCAAGAGGAGGTGCAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GGGAGGACTTCTCCGTGCCTTCCCCCTTCCCAGAGATaGCCCTGTCGAGGGAGTGGCAGAGACCATCCTGGA +
Preference number: 6 (lower is better)
Translates to: GRTSPCLPPSQR*PCRGSGRDHPG
Trigger: TCCAGGATGGTCTCTGCCACTCCCTCGACAGGGGCATCTCTGGGAAGGGGGAAGGCACGGAGAAGTCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TCTCTGCCAGAAGCGTGGCTTGGGGAACTGCAATGCTaGCTGGCAGCCGGGCTGGACAGGTCTTTGGCCGTC +
Preference number: 6 (lower is better)
Translates to: SLPEAWLGELQC*LAAGLDRSLAV
Trigger: GACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GAGAACTGGTGGCACAGAGGCCCTCACGTCACCACTTaGGCTGGGGCTCTGTGCAGACTCTGGGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: ENWWHRGPHVTT*AGALCRLWGRQ
Trigger: CTGCCTTCCCCAGAGTCTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGGGCCTCTGTGCCACCAGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TGTCAGCCCTCGCAGCAGAGCGCTCGCTTCTGGCTGTaGGAGGGCCTCTTTCAGACGATTCCCTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: CQPSQQSARFWL*EGLFQTIPSGL
Trigger: CAGGCCTGAGGGAATCGTCTGAAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTGCTGCGAGGGCTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TGCCAGAAGCGTGGCTTGGGGAACTGCAATGCTGCCTaGCAGCCGGGCTGGACAGGTCTTTGGCCGTCAGAG +
Preference number: 6 (lower is better)
Translates to: CQKRGLGNCNAA*QPGWTGLWPSE
Trigger: CTCTGACGGCCAAAGACCTGTCCAGCCCGGCTGCCAGGCAGCATTGCAGTTCCCCAAGCCACGCTTCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TCTGCCCAGTGGCTGAGGGGGACCGTTTCATGCCATTaGGCTTGTCTGCCTCCGTCGGTGGCTTCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: SAQWLRGTVSCH*ACLPPSVASGD
Trigger: GTCCCCAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp GGAGAACTGGTGGCACAGAGGCCCTCACGTCACCACTaGGGCTGGGGCTCTGTGCAGACTCTGGGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GELVAQRPSRHH*GWGSVQTLGKA
Trigger: TGCCTTCCCCAGAGTCTGCACAGAGCCCCAGCCCAAGTGGTGACGTGAGGGCCTCTGTGCCACCAGTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp CTCTGCCCAGTGGCTGAGGGGGACCGTTTCATGCCATaGGGCTTGTCTGCCTCCGTCGGTGGCTTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: LCPVAEGDRFMP*GLSASVGGFWG
Trigger: TCCCCAGAAGCCACCGACGGAGGCAGACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp ATTCCAGGTGGCTGCAGAGACCGCCTGGCAAGAAGCGCTTCGGGCTaGGGTTCCACGCCACGCCTCACCTTGCCCAGCTCCTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: IPGGCRDRLARSASG*GSTPRLTLPSSFSQ
Trigger: CTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp GGCGGGGAGTGCATCTTGCTGGGAAAGGCTTGCGCGATCTTGGAATaGCCCAGTGAGTGTCCCAGAAGAGGGGATGGTGACCGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: GGECILLGKACAILE*PSECPRRGDGDRCG
Trigger: CCCGCAGCGGTCACCATCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp TCTGGGAAGCCGTCTGCTTTCTTCACCACCACCTTGGCCTTCAGCTaGTCGCGGTCCAGGTCGTCCACAGACTCCTGGCGGCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: SGKPSAFFTTTLAFS*SRSRSSTDSWRPTF
Trigger: GAAGGTGGGCCGCCAGGAGTCTGTGGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGAAAGCAGACGGCTTCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TTGCCCAGCTCCTTCTCACAGGGAATTCCAGCTGAGTaGAGAGAGGAGTTGTCTCTGGGCGGGGGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: LPSSFSQGIPAE*REELSLGGGLA
Trigger: GGCGAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCCCTGTGAGAAGGAGCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TGGACAGGTCTTTGGCCGTCAGAGGGGGCGGAGGGATaGTGCTGGGATGCCTTTGTAGAGGCTGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: WTGLWPSEGAEG*CWDAFVEAAPS
Trigger: GGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp ACACAGTCGCCCGTTCAGGACGGGTCTCCACAGTCCTaGCCCTGGGCCCTCCCCGTTACAAGGCCTTTTTGT +
Preference number: 6 (lower is better)
Translates to: TQSPVQDGSPQS*PWALPVTRPFC
Trigger: ACAAAAAGGCCTTGTAACGGGGAGGGCCCAGGGGCAGGACTGTGGAGACCCGTCCTGAACGGGCGACTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000403666.5
ENST00000443808.1
CDS CCA 72 bp CCGGGAGGGCCGTGGATCGGAAAGAACTCTGCCCAGTaGCTGAGGGGGACCGTTTCATGCCATTGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: PGGPWIGKNSAQ*LRGTVSCHWAC
Trigger: ACAAGCCCAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATCCACGGCCCTCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp AGCGCTTCGGGCTTGGGTTCCACGCCACGCCTCACCTaGCCCAGCTCCTTCTCACAGGGAATTCCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SASGLGSTPRLT*PSSFSQGIPAE
Trigger: CTCAGCTGGAATTCCCTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp CTGGCAAGAAGCGCTTCGGGCTTGGGTTCCACGCCACGCCTCACCTaGCCCAGCTCCTTCTCACAGGGAATTCCAGCTGAGTGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: LARSASGLGSTPRLT*PSSFSQGIPAECRE
Trigger: CTCTCTGCACTCAGCTGGAATTCCCTGTGAGAAGGAGCTGGGCAAGGTGAGGCGTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp AAGAGACGGCACTCATCTGAGCTGCATGGGTGCTGCTaGCAAAAGCTCGGCTCTCAGAAGCCGGCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: KRRHSSELHGCC*QKLGSQKPAGA
Trigger: AGCCCCCGCCGGCTTCTGAGAGCCGAGCTTTTGTCAGCAGCACCCATGCAGCTCAGATGAGTGCCGTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp GCAGACTCTGGGGAAGGCAGTTCTGTCTTGGAGGCCTaGGGTCCGGACAGGAGAGCAATGTCCAGAGTGCCC +
Preference number: 6 (lower is better)
Translates to: ADSGEGSSVLEA*GPDRRAMSRVP
Trigger: GGGCACTCTGGACATTGCTCTCCTGTCCGGACCTCAGGCCTCCAAGACAGAACTGCCTTCCCCAGAGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp CTGGGTCCACTAGTCTCTGGCGATGTCGGGCTGAGTTaGAATGGCTCTTCGGAGGCTGCCCTTCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LGPLVSGDVGLS*NGSSEAALPGW
Trigger: CCAGCCTGGAAGGGCAGCCTCCGAAGAGCCATTTCAACTCAGCCCGACATCGCCAGAGACTAGTGGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411628.5
CDS GCA 72 bp GGCTGTGCTTGCGGGAGCACAGGTGCTTCTTGTCACTaGCGTAAGAGGGCGACAGCTTCTCCTCGGACTGCA +
Preference number: 6 (lower is better)
Translates to: GCACGSTGASCH*RKRATASPRTA
Trigger: TGCAGTCCGAGGAGAAGCTGTCGCCCTCTTACGGCAGTGACAAGAAGCACCTGTGCTCCCGCAAGCACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TTGGCCGTCAGAGGGGGCGGAGGGATGCTGCTGGGATaGCTTTGTAGAGGCTGCTCCTTCCTTTCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: LAVRGGGGMLLG*LCRGCSFLSGS
Trigger: GGAACCTGAAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TGCATGTGTCAGCCCTCGCAGCAGAGCGCTCGCTTCTaGCTGTGGGAGGGCCTCTTTCAGACGATTCCCTCA +
Preference number: 6 (lower is better)
Translates to: CMCQPSQQSARF*LWEGLFQTIPS
Trigger: TGAGGGAATCGTCTGAAAGAGGCCCTCCCACAGCCAGAAGCGAGCGCTCTGCTGCGAGGGCTGACACATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp AGGGAATTCCAGCTGAGTGCAGAGAGGAGTTGTCTCTaGGCGGGGGCCTCGCCTCACCTGGGCCATCTTTGT +
Preference number: 6 (lower is better)
Translates to: REFQLSAERSCL*AGASPHLGHLC
Trigger: ACAAAGATGGCCCAGGTGAGGCGAGGCCCCCGCCCAGAGACAACTCCTCTCTGCACTCAGCTGGAATTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TCTCACTCTCAATTCCAGGTGGCTGCAGAGACCGCCTaGCAAGAAGCGCTTCGGGCTTGGGTTCCACGCCAC +
Preference number: 6 (lower is better)
Translates to: SHSQFQVAAETA*QEALRAWVPRH
Trigger: GTGGCGTGGAACCCAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGTCTTTGGCCGTCAGAGGGGGCGGAGGGATGCTGCTaGGATGCCTTTGTAGAGGCTGCTCCTTCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: GLWPSEGAEGCC*DAFVEAAPSFQ
Trigger: CTGAAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CACCGAGGGACTGAGTGGCAGGCTCTTTGCCCTTTGTaGCCCCGACACTTGGTTTCTGAGAGGAGAGGGACC +
Preference number: 6 (lower is better)
Translates to: HRGTEWQALCPL*PRHLVSERRGT
Trigger: GGTCCCTCTCCTCTCAGAAACCAAGTGTCGGGGCCACAAAGGGCAAAGAGCCTGCCACTCAGTCCCTCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GACAGGGTTTGCTTTTCACCAACAGCGGACAGTTTCTaGTCCGCTGGCTCACTAGGCCCTGGGTGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: DRVCFSPTADSF*SAGSLGPGCPG
Trigger: GCCGGGACACCCAGGGCCTAGTGAGCCAGCGGACCAGAAACTGTCCGCTGTTGGTGAAAAGCAAACCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp ATGGTGGGCGGGGAGTGCATCTTGCTGGGAAAGGCTTGCGCGATCTaGGAATTGCCCAGTGAGTGTCCCAGAAGAGGGGATGGTGACCGC +
Preference number: 6 (lower is better)
Translates to: MVGGECILLGKACAI*ELPSECPRRGDGDR
Trigger: GCGGTCACCATCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp TTCCCTTCCGCCCTTCTGTCGGTGTTGGCGGCCGGCTaGCTCGGGCTTTTGTCTGTCTGTCTGTTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: FPSALLSVLAAG*LGLLSVCLLSV
Trigger: GACAGACAACAGACAGACAGACAAAAGCCCGAGTCAGCCGGCCGCCAACACCGACAGAAGGGCGGAAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TCAGACTTCGGGAACGGGGGCGCATCGGCGTGTTCCTaGATCTGTTCTCAGTGGCGATGCTTTCGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SDFGNGGASACS*ICSQWRCFRWY
Trigger: GTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGCGCCCCCGTTCCCGAAGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS GCA 72 bp GGCCTCACGATGTGTCTGACGATGGTGGGCGGGGAGTaGATCTTGCTGGGAAAGGCTTGCGCGATCTTGGAA +
Preference number: 6 (lower is better)
Translates to: GLTMCLTMVGGE*ILLGKACAILE
Trigger: TTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCATCGTCAGACACATCGTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp AGGCCTGAGGTCCGGACAGGAGAGCAATGTCCAGAGTaGCCTCGATCGGCTTCAGGCATGAGACAGACCTAC +
Preference number: 6 (lower is better)
Translates to: RPEVRTGEQCPE*PRSASGMRQTY
Trigger: GTAGGTCTGTCTCATGCCTGAAGCCGATCGAGGGCACTCTGGACATTGCTCTCCTGTCCGGACCTCAGGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp ACAGGTCTTTGGCCGTCAGAGGGGGCGGAGGGATGCTaGTGGGATGCCTTTGTAGAGGCTGCTCCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: TGLWPSEGAEGC*WDAFVEAAPSF
Trigger: AAAGGAAGGAGCAGCCTCTACAAAGGCATCCCAGCAGCATCCCTCCGCCCCCTCTGACGGCCAAAGACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GACTTTTCCGGGAGGGCCGTGGATCGGAAAGAACTCTaGCCAGTGGCTGAGGGGGACCGTTTCATGCCATTG +
Preference number: 6 (lower is better)
Translates to: DFSGRAVDRKEL*PVAEGDRFMPL
Trigger: CAATGGCATGAAACGGTCCCCCTCAGCCACTGGGCAGAGTTCTTTCCGATCCACGGCCCTCCCGGAAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCTGGGAGTGAGATCCAA +
Preference number: 6 (lower is better)
Translates to: GQERTTRTAWAG*GWTQAPGSEIQ
Trigger: TTGGATCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405643.5
ENST00000407621.1
CDS CCA 72 bp GGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCTGGGAGTGAGACGTTT +
Preference number: 6 (lower is better)
Translates to: GQERTTRTAWAG*GWTQAPGSETF
Trigger: AAACGTCTCACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS CAA 72 bp CAGGCAGGTCAGAAGCTTGGGGTCAGTGGTGTGGTCTaGGTGTTTAGGGGAGCTGCCCTCTCTCTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: QAGQKLGVSGVV*VFRGAALSLLG
Trigger: CCCCAACAGAGAGAGGGCAGCTCCCCTAAACACCAAGACCACACCACTGACCCCAAGCTTCTGACCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp TTGGGCCTCACGATGTGTCTGACGATGGTGGGCGGGGAGTGCATCTaGCTGGGAAAGGCTTGCGCGATCTTGGAATTGCCCAGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: LGLTMCLTMVGGECI*LGKACAILELPSEC
Trigger: ACACTCACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCATCGTCAGACACATCGTGAGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp GATTCCTGTTTCTCTGGGAAGCCGTCTGCTTTCTTCACCACCACCTaGGCCTTCAGCTTGTCGCGGTCCAGGTCGTCCACAGACTCCTGG +
Preference number: 6 (lower is better)
Translates to: DSCFSGKPSAFFTTT*AFSLSRSRSSTDSW
Trigger: CCAGGAGTCTGTGGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGAAAGCAGACGGCTTCCCAGAGAAACAGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TCCCCGAACTGTGGATCACAATCGGCTGATGTGGACTaGCAGAAGCTGCTGAGGAATCTCGGCTGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SPNCGSQSADVD*QKLLRNLGWER
Trigger: CCTCTCCCAGCCGAGATTCCTCAGCAGCTTCTGCCAGTCCACATCAGCCGATTGTGATCCACAGTTCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp AGTACCAGATGGGAAGTCAGGGGTGGAGCGGTAGCTTaGTGTTGGAGACCGGGGAGACAAGCTATGAGTGGG +
Preference number: 6 (lower is better)
Translates to: STRWEVRGGAVA*CWRPGRQAMSG
Trigger: CCCACTCATAGCTTGTCTCCCCGGTCTCCAACACCAAGCTACCGCTCCACCCCTGACTTCCCATCTGGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TCCCTGGCAGGCATTCGTGGGAGCCAGCTGTCATCTTaGGCTTCAGCACAGGGCAGAGGTTGTCCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: SLAGIRGSQLSS*ASAQGRGCPLC
Trigger: ACAAAGAGGACAACCTCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGTATCGTTCTTTTTCCCACTGCTGCTGGGGAGAACTaGTGGCACAGAGGCCCTCACGTCACCACTTGGGCT +
Preference number: 6 (lower is better)
Translates to: GIVLFPTAAGEN*WHRGPHVTTWA
Trigger: AGCCCAAGTGGTGACGTGAGGGCCTCTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACGATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGTTCGTTTTCCCACCCGGCGCCCATGCTTTCTCCATaGCCTGGGTCTGTGTATAGAAATCTGGGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: GSFSHPAPMLSP*PGSVYRNLGGS
Trigger: GGACCCACCCAGATTTCTATACACAGACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGGAAAACGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CTGGCCAATCCCATCGCTGGCTTTGTTCTGGGAGCCTaGGGTAGCAGGAAACACATCCGGCCCACTCTTACT +
Preference number: 6 (lower is better)
Translates to: LANPIAGFVLGA*GSRKHIRPTLT
Trigger: AGTAAGAGTGGGCCGGATGTGTTTCCTGCTACCCCAGGCTCCCAGAACAAAGCCAGCGATGGGATTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CATTTCCGAAACGGCATGGGTGGAGGGGATAATATGTaGTCAAGCTCCTCGTCCTGCTCCTCCTGGGACGCG +
Preference number: 6 (lower is better)
Translates to: HFRNGMGGGDNM*SSSSSCSSWDA
Trigger: CGCGTCCCAGGAGGAGCAGGACGAGGAGCTTGACCACATATTATCCCCTCCACCCATGCCGTTTCGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS CAA 72 bp ACGATGTGTCTGACGATGGTGGGCGGGGAGTGCATCTaGCTGGGAAAGGCTTGCGCGATCTTGGAATTGCCC +
Preference number: 6 (lower is better)
Translates to: TMCLTMVGGECI*LGKACAILELP
Trigger: GGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCACTCCCCGCCCACCATCGTCAGACACATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp TTCTCTGGGAAGCCGTCTGCTTTCTTCACCACCACCTaGGCCTTCAGCTTGTCGCGGTCCAGGTCGTCCACA +
Preference number: 6 (lower is better)
Translates to: FSGKPSAFFTTT*AFSLSRSRSST
Trigger: TGTGGACGACCTGGACCGCGACAAGCTGAAGGCCAAGGTGGTGGTGAAGAAAGCAGACGGCTTCCCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp TTCCCTGGCAGGCATTCGTGGGAGCCAGCTGTCATCTaGGGCTTCAGCACAGGGCAGAGGTTGTCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: FPGRHSWEPAVI*GFSTGQRLSSL
Trigger: CAAAGAGGACAACCTCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGGCTCCCACGAATGCCTGCCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp GTTCCAGGGCTCCTGGCAGTAGGATGGGGACCTTTCCTGTCCCTCTaGAACTCTGGGTCAGGCAGGGAAACTGCTGGTGAATTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: VPGLLAVGWGPFLSL*NSGSGRETAGEFWR
Trigger: TCTCCAGAATTCACCAGCAGTTTCCCTGCCTGACCCAGAGTTCAAGAGGGACAGGAAAGGTCCCCATCCTACTGCCAGGAGCCCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp TCTCCGTTCCACTGTCCACCCGGCCTGTTAAGGCCTTaGGGGGAACAAAAGAGACGGCACTCATCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: SPFHCPPGLLRP*GEQKRRHSSEL
Trigger: CAGCTCAGATGAGTGCCGTCTCTTTTGTTCCCCTCAAGGCCTTAACAGGCCGGGTGGACAGTGGAACGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GCATCTTGCTGGGAAAGGCTTGCGCGATCTTGGAATTaGCCAGTGAGTGTCCCAGAAGAGGGGATGGTGACC +
Preference number: 6 (lower is better)
Translates to: ASCWERLARSWN*PVSVPEEGMVT
Trigger: GGTCACCATCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp AGGGGATTCTGCCTGAGGAGTAAGGTAATCAGATCCTaGGCATCAGGTGGGGGTGCCTCATCCTTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: RGFCLRSKVIRS*ASGGGASSFSG
Trigger: GCCTGAGAAGGATGAGGCACCCCCACCTGATGCCCAGGATCTGATTACCTTACTCCTCAGGCAGAATCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CCA 72 bp TTGCACTGGTGGTATCGTTCTTTTTCCCACTGCTGCTaGGGAGAACTGGTGGCACAGAGGCCCTCACGTCAC +
Preference number: 6 (lower is better)
Translates to: LHWWYRSFSHCC*GELVAQRPSRH
Trigger: GTGACGTGAGGGCCTCTGTGCCACCAGTTCTCCCCAGCAGCAGTGGGAAAAAGAACGATACCACCAGTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GGAGAGCTTTTCACTCTTCTCACTCTCAATTCCAGGTaGCTGCAGAGACCGCCTGGCAAGAAGCGCTTCGGG +
Preference number: 6 (lower is better)
Translates to: GELFTLLTLNSR*LQRPPGKKRFG
Trigger: CCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGTGAGAAGAGTGAAAAGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp ATTAGAAAGAGAGATGGGGCGGTCAGTGTTTGGGGCTaGGGATGGCTTGGTCACGTCTCTGCCCACGTTCTG +
Preference number: 6 (lower is better)
Translates to: IRKRDGAVSVWG*GWLGHVSAHVL
Trigger: CAGAACGTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCCATCTCTCTTTCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CTTCTCATTAGAAAGAGAGATGGGGCGGTCAGTGTTTaGGGCTGGGGATGGCTTGGTCACGTCTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: LLIRKRDGAVSV*GWGWLGHVSAH
Trigger: GTGGGCAGAGACGTGACCAAGCCATCCCCAGCCCCAAACACTGACCGCCCCATCTCTCTTTCTAATGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GATGACAGAGAGCCAAACCGAACCTCTCTAAAGGACTaGACTAACACTCTCTCGAGGGGGAGGGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: DDREPNRTSLKD*TNTLSRGRGRL
Trigger: CAGCCTCCCCCTCCCCCTCGAGAGAGTGTTAGTCCAGTCCTTTAGAGAGGTTCGGTTTGGCTCTCTGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CCA 72 bp AAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACTCAGGCTCCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: KVKGQERTTRTA*AGWGWTQAPGS
Trigger: ACTCCCAGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000450827.5
CDS CCA 72 bp GGCCAAGAGAGGACTACAAGGACTGCCTGGGCTGGATaGGGTTGGACTCAGGCTCCGTTTGACCAAGCAATT +
Preference number: 6 (lower is better)
Translates to: GQERTTRTAWAG*GWTQAPFDQAI
Trigger: AATTGCTTGGTCAAACGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434115.5
CDS TCA 72 bp AGCAATGTCCAGAGTGCCCTCGATCGGCTTCAGGCATaGGACAGACCTACCTTCCAGCTTATACTCGGAGGG +
Preference number: 6 (lower is better)
Translates to: SNVQSALDRLQA*DRPTFQLILGG
Trigger: CCCTCCGAGTATAAGCTGGAAGGTAGGTCTGTCTCATGCCTGAAGCCGATCGAGGGCACTCTGGACATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp AGCTTTTCACTCTTCTCACTCTCAATTCCAGGTGGCTaGAGAGACCGCCTGGCAAGAAGCGCTTCGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SFSLFSLSIPGG*RDRLARSASGL
Trigger: CAAGCCCGAAGCGCTTCTTGCCAGGCGGTCTCTGCAGCCACCTGGAATTGAGAGTGAGAAGAGTGAAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GCTTGTCGCCCTCTGCTGGAGCATAAAGTGCTTCAGTaGATTTCTTCCCTTCCGCCCTTCTGTCGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: ACRPLLEHKVLQ*ISSLPPFCRCW
Trigger: CCAACACCGACAGAAGGGCGGAAGGGAAGAAATGCACTGAAGCACTTTATGCTCCAGCAGAGGGCGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp CACAAAGGAAAGGCCGGCCTCGAGCTTGTCGCCCTCTaGTGGAGCATAAAGTGCTTCAGTGCATTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: HKGKAGLELVAL*WSIKCFSAFLP
Trigger: GGGAAGAAATGCACTGAAGCACTTTATGCTCCAGCAGAGGGCGACAAGCTCGAGGCCGGCCTTTCCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TCCAAAAGTGAAAGGCCAAGAGAGGACTACAAGGACTaGCTGGGCTGGATGGGGTTGGACTCAGGCTCCGTT +
Preference number: 6 (lower is better)
Translates to: SKSERPREDYKD*LGWMGLDSGSV
Trigger: AACGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434115.5
CDS CCA 72 bp CTTTCCATGACTGTTCCAGGGCTCCTGGCAGTAGGATaGGGACCTTTCCTGTCCCTCTTGAACTCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: LSMTVPGLLAVG*GPFLSLLNSGS
Trigger: TGACCCAGAGTTCAAGAGGGACAGGAAAGGTCCCCATCCTACTGCCAGGAGCCCTGGAACAGTCATGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GAGAGGACTACAAGGACTGCCTGGGCTGGATGGGGTTaGACTCAGGCTCCGTTTGACCAAGCAATTCCACTT +
Preference number: 6 (lower is better)
Translates to: ERTTRTAWAGWG*TQAPFDQAIPL
Trigger: AAGTGGAATTGCTTGGTCAAACGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434115.5
CDS CCA 72 bp AAAGTGAAAGGCCAAGAGAGGACTACAAGGACTGCCTaGGCTGGATGGGGTTGGACTCAGGCTCCGTTTGAC +
Preference number: 6 (lower is better)
Translates to: KVKGQERTTRTA*AGWGWTQAPFD
Trigger: GTCAAACGGAGCCTGAGTCCAACCCCATCCAGCCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434115.5
CDS CAA 72 bp TGCATCTTGCTGGGAAAGGCTTGCGCGATCTTGGAATaGCCCAGTGAGTGTCCCAGAAGAGGGGATGGTGAC +
Preference number: 6 (lower is better)
Translates to: CILLGKACAILE*PSECPRRGDGD
Trigger: GTCACCATCCCCTCTTCTGGGACACTCACTGGGCAATTCCAAGATCGCGCAAGCCTTTCCCAGCAAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp TGGTGTTTAGGGGAGCTGCCCTCTCTCTGTTGGGGATaGCTTTCCATGACTGTTCCAGGGCTCCTGGCAGTA +
Preference number: 6 (lower is better)
Translates to: WCLGELPSLCWG*LSMTVPGLLAV
Trigger: TACTGCCAGGAGCCCTGGAACAGTCATGGAAAGCAATCCCCAACAGAGAGAGGGCAGCTCCCCTAAACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GCCATCTTTGTGGTTCGTTTTCCCACCCGGCGCCCATaGTTTCTCCATGGCCTGGGTCTGTGTATAGAAATC +
Preference number: 6 (lower is better)
Translates to: AIFVVRFPTRRP*FLHGLGLCIEI
Trigger: GATTTCTATACACAGACCCAGGCCATGGAGAAAGCATGGGCGCCGGGTGGGAAAACGAACCACAAAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TCAGTGATTTTCCAGGGCCAGAAGCCACATCTGGGTTaGTGCATTTCCGAAACGGCATGGGTGGAGGGGATA +
Preference number: 6 (lower is better)
Translates to: SVIFQGQKPHLG*CISETAWVEGI
Trigger: TATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGCCCTGGAAAATCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000478569.1
CDS CCA 72 bp GAATCTCGTGAAGAAGAAGGGTCCGAGGACAGGGAATaGGGAGACATTGGACTTCCCAGAGGGGAAACAGCA +
Preference number: 6 (lower is better)
Translates to: ESREEEGSEDRE*GDIGLPRGETA
Trigger: TGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCTTCACGAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp CTTGTGAAGAGCATCCTTCAGCAGGCTGCCCAGCGGTaGCGCCTCCTGCATAGACGCTTTGTTTTCAAAAGT +
Preference number: 6 (lower is better)
Translates to: LVKSILQQAAQR*RLLHRRFVFKS
Trigger: ACTTTTGAAAACAAAGCGTCTATGCAGGAGGCGCCACCGCTGGGCAGCCTGCTGAAGGATGCTCTTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp GCTGGTGACTGCCCATTGCCTATTAAGCTTTTCCGGTaGCTTGTTCGGCAATCCAAGGTCAGCCCCGGAATC +
Preference number: 6 (lower is better)
Translates to: AGDCPLPIKLFR*LVRQSKVSPGI
Trigger: GATTCCGGGGCTGACCTTGGATTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432426.5
CDS CAA 90 bp GCAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATaGCCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAACGTTTGACC +
Preference number: 6 (lower is better)
Translates to: AERGECGRGNAGDCP*PIKLFRLLVRQRLT
Trigger: GGTCAAACGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403666.5
ENST00000490016.6
CDS CAA 90 bp GCAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATaGCCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAATCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: AERGECGRGNAGDCP*PIKLFRLLVRQSKV
Trigger: GACCTTGGATTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432426.5
CDS TCA 72 bp CAGGCTCGGCCAGCTATAAACAGTAATTACATGAGTTaGGCCGTGCGTTCTGCTCAAAGCGCTGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: QARPAINSNYMS*AVRSAQSAVCG
Trigger: CCCACAGACAGCGCTTTGAGCAGAACGCACGGCTCAACTCATGTAATTACTGTTTATAGCTGGCCGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261569.11
CDS GCA 72 bp GTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAAC +
Preference number: 6 (lower is better)
Translates to: VSVVEAMLVTAH*LLSFSGCLFGN
Trigger: GTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261569.11
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS GCA 72 bp TTAGCACACTCTATTGTAACCATGACACACACTCCCTaGCAGCGTCCCGGTGATGACAGAGAGCCAAACCGA +
Preference number: 6 (lower is better)
Translates to: LAHSIVTMTHTP*QRPGDDREPNR
Trigger: TCGGTTTGGCTCTCTGTCATCACCGGGACGCTGGCAGGGAGTGTGTGTCATGGTTACAATAGAGTGTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS GCA 72 bp GTGATTTTCCAGGGCCAGAAGCCACATCTGGGTTGCTaGATTTCCGAAACGGCATGGGTGGAGGGGATAATA +
Preference number: 6 (lower is better)
Translates to: VIFQGQKPHLGC*ISETAWVEGII
Trigger: TATTATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTTCTGGCCCTGGAAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000478569.1
CDS GCA 72 bp CTGGTGACTGCCCATTGCCTATTAAGCTTTTCCGGTTaGTTGTTCGGCAATCCAAGGTCAGCCCCGGAATCT +
Preference number: 6 (lower is better)
Translates to: LVTAHCLLSFSG*LFGNPRSAPES
Trigger: AGATTCCGGGGCTGACCTTGGATTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432426.5
CDS GCA 72 bp ATATGTGGTCAAGCTAGCTCTGCTTCAGTGACTGCTTaGTCCAAATGGGGGCTGCTCTGTCAGCCTATCCCA +
Preference number: 6 (lower is better)
Translates to: ICGQASSASVTA*SKWGLLCQPIP
Trigger: TGGGATAGGCTGACAGAGCAGCCCCCATTTGGAGCAAGCAGTCACTGAAGCAGAGCTAGCTTGACCACATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS CCA 72 bp GGGGGCGCATCGGCGTGTTCCTGCATCTGTTCTCAGTaGCGATGCTTTCGGTGGTACAGAAATGTTTTGATA +
Preference number: 6 (lower is better)
Translates to: GGASACSCICSQ*RCFRWYRNVLI
Trigger: TATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGCGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CCA 72 bp AGAAGAAGGGTCCGAGGACAGGGAATGGGGAGACATTaGACTTCCCAGAGGGGAAACAGCAAACATATCTCC +
Preference number: 6 (lower is better)
Translates to: RRRVRGQGMGRH*TSQRGNSKHIS
Trigger: GGAGATATGTTTGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CCA 72 bp AAGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATaGGTGGAGGGGATAATATGTGGTCAAGCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: KPHLGCCISETA*VEGIICGQAPR
Trigger: ACGAGGAGCTTGACCACATATTATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
CDS CCA 72 bp AAAACGGTAAGTGTCCAGCTGTTCGGGGATACTATCTaGCCAGCGGGAGATCCTCCCAGAGAGACTCTGTAT +
Preference number: 6 (lower is better)
Translates to: KTVSVQLFGDTI*PAGDPPRETLY
Trigger: ATACAGAGTCTCTCTGGGAGGATCTCCCGCTGGCCAGATAGTATCCCCGAACAGCTGGACACTTACCGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485768.1
CDS CAA 72 bp GCTGGTGACTGCCCATTGCCTATTAAGCTTTTCCGGTaGCTTGTTCGGCAACTTTGTGTTCGCCGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: AGDCPLPIKLFR*LVRQLCVRRSL
Trigger: CAGGCTTCGGCGAACACAAAGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261569.11
ENST00000436277.5
ENST00000447738.1
CDS CAA 72 bp GGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATaGCCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAA +
Preference number: 6 (lower is better)
Translates to: GECGRGNAGDCP*PIKLFRLLVRQ
Trigger: TTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000432426.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CAA 72 bp GCCGAGCCATGTGAGAAGCGGGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGTCCACACACTCGCTTC +
Preference number: 6 (lower is better)
Translates to: AEPCEKRVHWMA*RNYLYCPHTRF
Trigger: GAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCGCTTCTCACATGGCTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CAA 90 bp AATCTCGTGAAGAAGAAGGGTCCGAGGACAGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAACAGCAAACATATCTGACAGGGTGG +
Preference number: 6 (lower is better)
Translates to: NLVKKKGPRTGNGET*DFPEGKQQTYLTGW
Trigger: CCACCCTGTCAGATATGTTTGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCTTCACGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443808.1
CDS CAA 90 bp GCAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATaGCCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAACTTTGTGTT +
Preference number: 6 (lower is better)
Translates to: AERGECGRGNAGDCP*PIKLFRLLVRQLCV
Trigger: AACACAAAGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261569.11
ENST00000436277.5
ENST00000447738.1
CDS CAA 90 bp AATCTCGTGAAGAAGAAGGGTCCGAGGACAGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAACAGCAAACATATCTCCTGGGATCA +
Preference number: 6 (lower is better)
Translates to: NLVKKKGPRTGNGET*DFPEGKQQTYLLGS
Trigger: TGATCCCAGGAGATATGTTTGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCTTCACGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CAA 90 bp GCAGAGAGAGGTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATaGCCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAAAAACTTCCT +
Preference number: 6 (lower is better)
Translates to: AERGECGRGNAGDCP*PIKLFRLLVRQKLP
Trigger: AGGAAGTTTTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCACCTCTCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS TCA 72 bp GTGTGGACAAGTCCATGCACTGGTTCTCCATTGATGTaGGTGATAAGATCTCCAGCCTTCAGTCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: VWTSPCTGSPLM*VIRSPAFSPAW
Trigger: CCAGGCAGGACTGAAGGCTGGAGATCTTATCACTCACATCAATGGAGAACCAGTGCATGGACTTGTCCACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS TCA 72 bp CAGGGAGAATTCAGTGCAGATCATTCCCTCCAAAAGTaGAAGGCCAAGAGAGGACTACAAGGACTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: QGEFSADHSLQK*KAKRGLQGLPG
Trigger: CCCAGGCAGTCCTTGTAGTCCTCTCTTGGCCTTTCACTTTTGGAGGGAATGATCTGCACTGAATTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS TCA 72 bp CACCGGGTTTGGAAGAAGGTACCTCCCTCAAGTTCCTaGGTAGAACAGGGCCAAACTTGTAGGGCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: HRVWKKVPPSSS*VEQGQTCRAVV
Trigger: TACAACAGCCCTACAAGTTTGGCCCTGTTCTACTCAGGAACTTGAGGGAGGTACCTTCTTCCAAACCCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS GCA 72 bp CTGGTGACTGCCCATTGCCTATTAAGCTTTTCCGGTTaGTTGTTCGGCAACTTTGTGTTCGCCGAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: LVTAHCLLSFSG*LFGNFVFAEAC
Trigger: ACAGGCTTCGGCGAACACAAAGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261569.11
ENST00000436277.5
ENST00000447738.1
CDS GCA 72 bp GTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAAA +
Preference number: 6 (lower is better)
Translates to: VSVVEAMLVTAH*LLSFSGCLFGK
Trigger: TTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403625.6
CDS GCA 72 bp GTGAGTGTGGTCGAGGCAATGCTGGTGACTGCCCATTaGCTATTAAGCTTTTCCGGTTGCTTGTTCGGCAAT +
Preference number: 6 (lower is better)
Translates to: VSVVEAMLVTAH*LLSFSGCLFGN
Trigger: ATTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGCATTGCCTCGACCACACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432426.5
CDS CCA 72 bp CTAATCGCTGCCGAGCCATGTGAGAAGCGGGTTCACTaGATGGCTTTGAGGAATTATCTGTACTGTCCACAC +
Preference number: 6 (lower is better)
Translates to: LIAAEPCEKRVH*MALRNYLYCPH
Trigger: GTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCGCTTCTCACATGGCTCGGCAGCGATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CCA 72 bp ATGACAGGGATCTGTTCAAGCAGGAGAAACTTCGGCTaGTGTGGAGTAAAGGAGAAGGCTGCTTGGCTAGCT +
Preference number: 6 (lower is better)
Translates to: MTGICSSRRNFG*CGVKEKAAWLA
Trigger: AGCTAGCCAAGCAGCCTTCTCCTTTACTCCACACCAGCCGAAGTTTCTCCTGCTTGAACAGATCCCTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TTTTCCAAATCACTCCCGGGTCCATGGGATTTCTGGTaGGATTCCTGTTTCTCTGGGAAGCCGTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: FSKSLPGPWDFW*DSCFSGKPSAF
Trigger: GAAAGCAGACGGCTTCCCAGAGAAACAGGAATCCCACCAGAAATCCCATGGACCCGGGAGTGATTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TGTCTGTCTGTCTGTTGTCTGTCTGTTTGCACAGGGTaGGGCAATCTTTCACAGTGGATGGTTTGGGGTGCT +
Preference number: 6 (lower is better)
Translates to: CLSVCCLSVCTG*GNLSQWMVWGA
Trigger: AGCACCCCAAACCATCCACTGTGAAAGATTGCCCCACCCTGTGCAAACAGACAGACAACAGACAGACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp AAGCCACATCTGGGTTGCTGCATTTCCGAAACGGCATaGGTGGAGGGGATAATATGTGGTCAAGCTAGCTCT +
Preference number: 6 (lower is better)
Translates to: KPHLGCCISETA*VEGIICGQASS
Trigger: AGAGCTAGCTTGACCACATATTATCCCCTCCACCCATGCCGTTTCGGAAATGCAGCAACCCAGATGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS CAA 72 bp AAGAAGAAGGGTCCGAGGACAGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAACAGCAAACATATCTC +
Preference number: 6 (lower is better)
Translates to: KKKGPRTGNGET*DFPEGKQQTYL
Trigger: GAGATATGTTTGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CAA 72 bp CCAGCTGTCATCTTGGGCTTCAGCACAGGGCAGAGGTaGTCCTCTTTGTCCTCAAGTGACATTTTCTTTCGG +
Preference number: 6 (lower is better)
Translates to: PAVILGFSTGQR*SSLSSSDIFFR
Trigger: CCGAAAGAAAATGTCACTTGAGGACAAAGAGGACAACCTCTGCCCTGTGCTGAAGCCCAAGATGACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp AAGAAGAAGGGTCCGAGGACAGGGAATGGGGAGACATaGGACTTCCCAGAGGGGAAACAGCAAACATATCTG +
Preference number: 6 (lower is better)
Translates to: KKKGPRTGNGET*DFPEGKQQTYL
Trigger: CAGATATGTTTGCTGTTTCCCCTCTGGGAAGTCCAATGTCTCCCCATTCCCTGTCCTCGGACCCTTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443808.1
CDS CAA 90 bp CTAATCGCTGCCGAGCCATGTGAGAAGCGGGTTCACTGGATGGCTTaGAGGAATTATCTGTACTGTCCACACACTCGCTTCGTCCATTTA +
Preference number: 6 (lower is better)
Translates to: LIAAEPCEKRVHWMA*RNYLYCPHTRFVHL
Trigger: TAAATGGACGAAGCGAGTGTGTGGACAGTACAGATAATTCCTCAAAGCCATCCAGTGAACCCGCTTCTCACATGGCTCGGCAGCGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS GCA 72 bp AGTGATAAGATCTCCAGCCTTCAGTCCTGCCTGGCATaGCGGACTTCCTTCTTCTACATTCCAGACGATATG +
Preference number: 6 (lower is better)
Translates to: SDKISSLQSCLA*RTSFFYIPDDM
Trigger: CATATCGTCTGGAATGTAGAAGAAGGAAGTCCGGCATGCCAGGCAGGACTGAAGGCTGGAGATCTTATCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp TCGGGCTTTTGTCTGTCTGTCTGTTGTCTGTCTGTTTaGACAGGGTGGGGCAATCTTTCACAGTGGATGGTT +
Preference number: 6 (lower is better)
Translates to: SGFCLSVCCLSV*TGWGNLSQWMV
Trigger: AACCATCCACTGTGAAAGATTGCCCCACCCTGTGCAAACAGACAGACAACAGACAGACAGACAAAAGCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp GTCAGCTGCTTTCCTCAGGTTAACGGCAGTGCACACTaGACTGATTTTGTTAAAGGAACGAGGCTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: VSCFPQVNGSAH*TDFVKGTRLAA
Trigger: AGCTGCAAGCCTCGTTCCTTTAACAAAATCAGTGCAGTGTGCACTGCCGTTAACCTGAGGAAAGCAGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CCA 72 bp AGGGATCTGTTCAAGCAGGAGAAACTTCGGCTGGTGTaGAGTAAAGGAGAAGGCTGCTTGGCTAGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: RDLFKQEKLRLV*SKGEGCLASFL
Trigger: CAAAAAGCTAGCCAAGCAGCCTTCTCCTTTACTCCACACCAGCCGAAGTTTCTCCTGCTTGAACAGATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TGCTTTCTCCATGGCCTGGGTCTGTGTATAGAAATCTaGGTGGGTCCTTCCCACAGAGAGGAGATTTTTGGA +
Preference number: 6 (lower is better)
Translates to: CFLHGLGLCIEI*VGPSHREEIFG
Trigger: TCCAAAAATCTCCTCTCTGTGGGAAGGACCCACCCAGATTTCTATACACAGACCCAGGCCATGGAGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp TGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTaGGACACACAGGGCTCCAAAAGTGAAAGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: WQFIQGVMFSQH*DTQGSKSERPR
Trigger: TCTTGGCCTTTCACTTTTGGAGCCCTGTGTGTCCAAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407621.1
ENST00000434115.5
CDS CAA 72 bp GCTGGTGACTGCCCATTGCCTATTAAGCTTTTCCGGTaGCTTGTTCGGCAACGTTTGACCAAGCAATTCCAC +
Preference number: 6 (lower is better)
Translates to: AGDCPLPIKLFR*LVRQRLTKQFH
Trigger: GTGGAATTGCTTGGTCAAACGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403666.5
ENST00000490016.6
CDS CAA 72 bp GAACAACCCAGGGACTCACCTTCCAAGGGATCCTTATaGAGTCCCAGTTGGCTAATGATGTACCTGGGAATG +
Preference number: 6 (lower is better)
Translates to: EQPRDSPSKGSL*SPSWLMMYLGM
Trigger: CATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGGTGAGTCCCTGGGTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS CAA 90 bp AGGTCAGCCCCGGAATCTGTAGCCTTTCCCGCTGGGCTTTCATGGTaGTTATATGTTAGCACACTCTATTGTAACCATGACACACACTCC +
Preference number: 6 (lower is better)
Translates to: RSAPESVAFPAGLSW*LYVSTLYCNHDTHS
Trigger: GGAGTGTGTGTCATGGTTACAATAGAGTGTGCTAACATATAACAACCATGAAAGCCCAGCGGGAAAGGCTACAGATTCCGGGGCTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CAA 90 bp ACAACCCAGGGACTCACCTTCCAAGGGATCCTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGGAATGTCGGTTTTAATACCCTGTCC +
Preference number: 6 (lower is better)
Translates to: TTQGLTFQGILIESQ*ANDVPGNVGFNTLS
Trigger: GGACAGGGTATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGGTGAGTCCCTGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS TCA 72 bp GACATAAACACAAAGAACAAAAACGAAGGTGTGCCATaGTACATGTCAGGCGGAGTCGGGGGAAGGATGGCT +
Preference number: 6 (lower is better)
Translates to: DINTKNKNEGVP*YMSGGVGGRMA
Trigger: AGCCATCCTTCCCCCGACTCCGCCTGACATGTATCATGGCACACCTTCGTTTTTGTTCTTTGTGTTTATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451144.1
CDS GCA 72 bp CTGGTGACTGCCCATTGCCTATTAAGCTTTTCCGGTTaGTTGTTCGGCAACTCCAAAAGTGAAAGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: LVTAHCLLSFSG*LFGNSKSERPR
Trigger: TCTTGGCCTTTCACTTTTGGAGTTGCCGAACAAGCAACCGGAAAAGCTTAATAGGCAATGGGCAGTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405643.5
CDS CCA 72 bp CAGTCCTCCGTGCAAATGAAAAATGGGCTGAGGCACTaGGGGAGAAATTTCTTGGACTATCTTGAGGGCTAT +
Preference number: 6 (lower is better)
Translates to: QSSVQMKNGLRH*GRNFLDYLEGY
Trigger: ATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATTTTTCATTTGCACGGAGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CAA 90 bp GCAGGTAGGATTTATTCATCTTTAAGCTGGAAGGAGAAAGCTCTCTaGCACTGGTGGTATCGTTCTTTTTCCCACTGCTGCTGGGGAGAA +
Preference number: 6 (lower is better)
Translates to: AGRIYSSLSWKEKAL*HWWYRSFSHCCWGE
Trigger: TTCTCCCCAGCAGCAGTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGCTTTCTCCTTCCAGCTTAAAGATGAATAAATCCTACCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp TCAGCTGCTTTCCTCAGGTTAACGGCAGTGCACACTGCACTGATTTaGTTAAAGGAACGAGGCTTGCAGCTCTGCATATCAAGTAATTGG +
Preference number: 6 (lower is better)
Translates to: SAAFLRLTAVHTALI*LKERGLQLCISSNW
Trigger: CCAATTACTTGATATGCAGAGCTGCAAGCCTCGTTCCTTTAACAAAATCAGTGCAGTGTGCACTGCCGTTAACCTGAGGAAAGCAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405643.5
ENST00000407621.1
CDS CAA 90 bp TTAATGTGGTGGCAATTCATCCAAGGGGTGATGTTCTCCCAGCATTaGGACACACAGGGAGAATTCAGTGCAGATCATTCCCTCCAAAAG +
Preference number: 6 (lower is better)
Translates to: LMWWQFIQGVMFSQH*DTQGEFSADHSLQK
Trigger: CTTTTGGAGGGAATGATCTGCACTGAATTCTCCCTGTGTGTCCAAATGCTGGGAGAACATCACCCCTTGGATGAATTGCCACCACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450827.5
CDS TCA 72 bp AAGTGTAACTCGTCTGGTGTTGGTTGGTATGGTAACTaGTGCAACTTCTCCTGGGAGGAACAGGATGAAGAG +
Preference number: 6 (lower is better)
Translates to: KCNSSGVGWYGN*CNFSWEEQDEE
Trigger: CTCTTCATCCTGTTCCTCCCAGGAGAAGTTGCATCAGTTACCATACCAACCAACACCAGACGAGTTACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS TCA 72 bp TCTGTACTGTCCACACACTCGCTTCGTCCATTTATCTaGTCCAAGTGCTCTGAAAAACTGCCAACTGACAGG +
Preference number: 6 (lower is better)
Translates to: SVLSTHSLRPFI*SKCSEKLPTDR
Trigger: CCTGTCAGTTGGCAGTTTTTCAGAGCACTTGGATCAGATAAATGGACGAAGCGAGTGTGTGGACAGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS TCA 72 bp TCTTCCATCCTCACTCAGCTGTCTTTTATACTTCAGTaGTTTTCCAGGGCCAGAAGCCACATCTGGGTTGCT +
Preference number: 6 (lower is better)
Translates to: SSILTQLSFILQ*FSRARSHIWVA
Trigger: AGCAACCCAGATGTGGCTTCTGGCCCTGGAAAATCACTGAAGTATAAAAGACAGCTGAGTGAGGATGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000403625.6
ENST00000406039.5
ENST00000406374.5
ENST00000432817.5
ENST00000452953.5
ENST00000478569.1
CDS GCA 72 bp GCATCGGCGTGTTCCTGCATCTGTTCTCAGTGGCGATaGTTTCGGTGGTACAGAAATGTTTTGATAAGAAGT +
Preference number: 6 (lower is better)
Translates to: ASACSCICSQWR*FRWYRNVLIRS
Trigger: ACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACACGCCGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CCA 72 bp GAGATTTTTGGAGTTGTCACTGGTTTTCGCAGTTTCTaGAAAGCACAGTTCCATGGAGGGCTCTCTGCATGT +
Preference number: 6 (lower is better)
Translates to: EIFGVVTGFRSF*KAQFHGGLSAC
Trigger: ACATGCAGAGAGCCCTCCATGGAACTGTGCTTTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp TCCTTCCCACAGAGAGGAGATTTTTGGAGTTGTCACTaGTTTTCGCAGTTTCTGGAAAGCACAGTTCCATGG +
Preference number: 6 (lower is better)
Translates to: SFPQRGDFWSCH*FSQFLESTVPW
Trigger: CCATGGAACTGTGCTTTCCAGAAACTGCGAAAACCAGTGACAACTCCAAAAATCTCCTCTCTGTGGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GCCCCGGAATCTGTAGCCTTTCCCGCTGGGCTTTCATaGTTGTTATATGTTAGCACACTCTATTGTAACCAT +
Preference number: 6 (lower is better)
Translates to: APESVAFPAGLS*LLYVSTLYCNH
Trigger: ATGGTTACAATAGAGTGTGCTAACATATAACAACCATGAAAGCCCAGCGGGAAAGGCTACAGATTCCGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CAA 72 bp ATGAAAAATGGGCTGAGGCACTGGGGGAGAAATTTCTaGGACTATCTTGAGGGCTATTTCCTGCATGAGCAG +
Preference number: 6 (lower is better)
Translates to: MKNGLRHWGRNF*DYLEGYFLHEQ
Trigger: CTGCTCATGCAGGAAATAGCCCTCAAGATAGTCCAAGAAATTTCTCCCCCAGTGCCTCAGCCCATTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CAA 72 bp TTCCTCAGGTTAACGGCAGTGCACACTGCACTGATTTaGTTAAAGGAACGAGGCTTGCAGCTCTGCATATCA +
Preference number: 6 (lower is better)
Translates to: FLRLTAVHTALI*LKERGLQLCIS
Trigger: TGATATGCAGAGCTGCAAGCCTCGTTCCTTTAACAAAATCAGTGCAGTGTGCACTGCCGTTAACCTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CAA 90 bp CGGTGGTACAGAAATGTTTTGATAAGAAGTGTAACTCGTCTGGTGTaGGTTGGTATGGTAACTGATGCAACTTCTCCTGGGAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: RWYRNVLIRSVTRLV*VGMVTDATSPGRNR
Trigger: CCTGTTCCTCCCAGGAGAAGTTGCATCAGTTACCATACCAACCAACACCAGACGAGTTACACTTCTTATCAAAACATTTCTGTACCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CAA 90 bp TCCCAAATGAGCCATTTCTTCCAAGGGATCCTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGGAATGTCGGTTTTAATACCCTGTCC +
Preference number: 6 (lower is better)
Translates to: SQMSHFFQGILIESQ*ANDVPGNVGFNTLS
Trigger: GGACAGGGTATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGAAATGGCTCATTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS TCA 72 bp CGCCTCCTGCATAGACGCTTTGTTTTCAAAAGTACTTaGCCTTTCCACAGCCTTCGGATAGACTTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: RLLHRRFVFKST*PFHSLRIDFLL
Trigger: GAGAAGAAAGTCTATCCGAAGGCTGTGGAAAGGTCAAGTACTTTTGAAAACAAAGCGTCTATGCAGGAGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp AAAGAGATCTCCTCCTTTCGAGACTTTCTTTCTTCTTaGATTTCTTGCTCCGCCTCACCATCCGGCTCTTAT +
Preference number: 6 (lower is better)
Translates to: KEISSFRDFLSS*ISCSASPSGSY
Trigger: ATAAGAGCCGGATGGTGAGGCGGAGCAAGAAATCCAAGAAGAAAGAAAGTCTCGAAAGGAGGAGATCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp CCGGAATCTGTAGCCTTTCCCGCTGGGCTTTCATGGTaGTTATATGTTAGCACACTCTATTGTAACCATGAC +
Preference number: 6 (lower is better)
Translates to: PESVAFPAGLSW*LYVSTLYCNHD
Trigger: GTCATGGTTACAATAGAGTGTGCTAACATATAACAACCATGAAAGCCCAGCGGGAAAGGCTACAGATTCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405643.5
ENST00000407621.1
ENST00000432426.5
CDS CAA 72 bp GGACTCACCTTCCAAGGGATCCTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGGAATGTCGGTTTTAAT +
Preference number: 6 (lower is better)
Translates to: GLTFQGILIESQ*ANDVPGNVGFN
Trigger: ATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGGTGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS CCA 72 bp TTTCAGAATATTCTGAACTCCAGCTCAGTGTTTCTGTaGATGGCAAGGTGGTGCTTTTGGTTTTGTCCACAG +
Preference number: 6 (lower is better)
Translates to: FQNILNSSSVFL*MARWCFWFCPQ
Trigger: CTGTGGACAAAACCAAAAGCACCACCTTGCCATCCACAGAAACACTGAGCTGGAGTTCAGAATATTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GAGTTCTATAACTTCTGTGTGGACAAGTCCATGCACTaGTTCTCCATTGATGTGAGTGATAAGATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: EFYNFCVDKSMH*FSIDVSDKISS
Trigger: GCTGGAGATCTTATCACTCACATCAATGGAGAACCAGTGCATGGACTTGTCCACACAGAAGTTATAGAACTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CCA 72 bp GACTCACCTTCCAAGGGATCCTTATTGAGTCCCAGTTaGCTAATGATGTACCTGGGAATGTCGGTTTTAATA +
Preference number: 6 (lower is better)
Translates to: DSPSKGSLLSPS*LMMYLGMSVLI
Trigger: TATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGGTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490016.6
CDS CAA 72 bp TCTCAGTGGCGATGCTTTCGGTGGTACAGAAATGTTTaGATAAGAAGTGTAACTCGTCTGGTGTTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: SQWRCFRWYRNV*IRSVTRLVLVG
Trigger: ACCAACCAACACCAGACGAGTTACACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CAA 72 bp GTGTGGAGTAAAGGAGAAGGCTGCTTGGCTAGCTTTTaGAAAAGAGATCTCCTCCTTTCGAGACTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: VWSKGEGCLASF*KRDLLLSRLSF
Trigger: GAAAGAAAGTCTCGAAAGGAGGAGATCTCTTTTCAAAAAGCTAGCCAAGCAGCCTTCTCCTTTACTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 90 bp TGCATCTGTTCTCAGTGGCGATGCTTTCGGTGGTACAGAAATGTTTaGATAAGAAGTGTAACTCGTCTGGTGTTGGTTGGTATGGTAACT +
Preference number: 6 (lower is better)
Translates to: CICSQWRCFRWYRNV*IRSVTRLVLVGMVT
Trigger: AGTTACCATACCAACCAACACCAGACGAGTTACACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS TCA 72 bp TTGGAAAGAATTAAGGGCAGTGACATCCAGTGCTGGTaGGAATGTAGAAAATGGGCATTCTTATGGGTGAAG +
Preference number: 6 (lower is better)
Translates to: LERIKGSDIQCW*ECRKWAFLWVK
Trigger: CTTCACCCATAAGAATGCCCATTTTCTACATTCTCACCAGCACTGGATGTCACTGCCCTTAATTCTTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470421.1
CDS CCA 72 bp TGTTCCTGCATCTGTTCTCAGTGGCGATGCTTTCGGTaGTACAGAAATGTTTTGATAAGAAGTGTAACTCGT +
Preference number: 6 (lower is better)
Translates to: CSCICSQWRCFR*YRNVLIRSVTR
Trigger: ACGAGTTACACTTCTTATCAAAACATTTCTGTACCACCGAAAGCATCGCCACTGAGAACAGATGCAGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CCA 72 bp GCCATTTCTTCCAAGGGATCCTTATTGAGTCCCAGTTaGCTAATGATGTACCTGGGAATGTCGGTTTTAATA +
Preference number: 6 (lower is better)
Translates to: AISSKGSLLSPS*LMMYLGMSVLI
Trigger: TATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGAAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CAA 72 bp AGCCATTTCTTCCAAGGGATCCTTATTGAGTCCCAGTaGGCTAATGATGTACCTGGGAATGTCGGTTTTAAT +
Preference number: 6 (lower is better)
Translates to: SHFFQGILIESQ*ANDVPGNVGFN
Trigger: ATTAAAACCGACATTCCCAGGTACATCATTAGCCAACTGGGACTCAATAAGGATCCCTTGGAAGAAATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
CDS CAA 72 bp ATTTATTCATCTTTAAGCTGGAAGGAGAAAGCTCTCTaGCACTGGTGGTATCGTTCTTTTTCCCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: IYSSLSWKEKAL*HWWYRSFSHCC
Trigger: GCAGCAGTGGGAAAAAGAACGATACCACCAGTGCAAGAGAGCTTTCTCCTTCCAGCTTAAAGATGAATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS CAA 72 bp AGAAATGTTTTGATAAGAAGTGTAACTCGTCTGGTGTaGGTTGGTATGGTAACTGATGCAACTTCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RNVLIRSVTRLV*VGMVTDATSPG
Trigger: CCCAGGAGAAGTTGCATCAGTTACCATACCAACCAACACCAGACGAGTTACACTTCTTATCAAAACATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000436277.5
ENST00000447738.1
ENST00000490016.6
CDS CAA 90 bp GAAATAGCCAGTTTGGGAAGTAGGCCAGAACTGAGTTTATGTCTGTaGCTTTCAGTATCTGAAGAGTTGGATGTTGATAGCTGTTGCATT +
Preference number: 6 (lower is better)
Translates to: EIASLGSRPELSLCL*LSVSEELDVDSCCI
Trigger: AATGCAACAGCTATCAACATCCAACTCTTCAGATACTGAAAGCAACAGACATAAACTCAGTTCTGGCCTACTTCCCAAACTGGCTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp AGTAGCAGTCACACACTCCAAAAACAAGACTGTGGGTaGAAGGCTATGCCTCTAAGAAAACAATATCTTAAT +
Preference number: 6 (lower is better)
Translates to: SSSHTLQKQDCG*KAMPLRKQYLN
Trigger: ATTAAGATATTGTTTTCTTAGAGGCATAGCCTTGCACCCACAGTCTTGTTTTTGGAGTGTGTGACTGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485768.1
CDS CAA 72 bp CACAATGGATATAAAGCACGAGTAAGAAATACACTTTaGTGCTTTATGTCATGGGTTGTCATCACCCTTCCC +
Preference number: 6 (lower is better)
Translates to: HNGYKARVRNTL*CFMSWVVITLP
Trigger: GGGAAGGGTGATGACAACCCATGACATAAAGCACAAAAGTGTATTTCTTACTCGTGCTTTATATCCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478569.1
CDS TCA 72 bp TTGTCCACAGAGTCTTCCTTCTCTTCTGCTGAATTCTaGGTGATTCGATCTATACTGCTGAAAACTTTTGAA +
Preference number: 6 (lower is better)
Translates to: LSTESSFSSAEF*VIRSILLKTFE
Trigger: TTCAAAAGTTTTCAGCAGTATAGATCGAATCACTCAGAATTCAGCAGAAGAGAAGGAAGACTCTGTGGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261569.11
ENST00000403625.6
ENST00000403666.5
ENST00000405643.5
ENST00000443808.1
CDS GCA 72 bp AATGGATATAAAGCACGAGTAAGAAATACACTTTTGTaGTTTATGTCATGGGTTGTCATCACCCTTCCCAAC +
Preference number: 6 (lower is better)
Translates to: NGYKARVRNTLL*FMSWVVITLPN
Trigger: GTTGGGAAGGGTGATGACAACCCATGACATAAAGCACAAAAGTGTATTTCTTACTCGTGCTTTATATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478569.1