RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MASP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127241

Ensembl transcript IDs: ENST00000169293.10, ENST00000296280.11, ENST00000337774.10, ENST00000392470.6, ENST00000392472.6, ENST00000392475.2, ENST00000425937.1, ENST00000439271.1, ENST00000460839.5, ENST00000465015.1, ENST00000468121.1, ENST00000480349.1, ENST00000483719.1, ENST00000490558.5, ENST00000495249.1

Found 967 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTAGCCAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATaGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCCCCTCACCGCA +
Preference number: 1 (lower is better)
Translates to: SSQPISSLGGVSSRE*HLSLQTAQGSPLTA
Trigger: TGCGGTGAGGGGAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTGGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR CCA 90 bp CAGGGAAAGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTaGAGCCTTTTCCCTATACCACACTCTGCCTCTCAGGGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: QGKRLGQAQEHRSPA*SLFPIPHSASQGPG
Trigger: CCCAGGACCCTGAGAGGCAGAGTGTGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR TCA 90 bp GTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCTaGGTTGACAATGGGAATTTAAGGGCTTGGTGGGCCTCCCACGGC +
Preference number: 1 (lower is better)
Translates to: VSAGVPGWHMGPNVF*VDNGNLRAWWASHG
Trigger: GCCGTGGGAGGCCCACCAAGCCCTTAAATTCCCATTGTCAACTCAGAACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 90 bp CAGACAGGGAAAGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTaGCTGGAGCCTTTTCCCTATACCACACTCTGCCTCTCAGGGTCC +
Preference number: 1 (lower is better)
Translates to: QTGKETWTSSGTQVS*LEPFPYTTLCLSGS
Trigger: GGACCCTGAGAGGCAGAGTGTGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 90 bp TTCAAGGCTGAAAGATTGCTTTGTGCTTGTCTGGAGCAGCAGGTGTaGACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGC +
Preference number: 1 (lower is better)
Translates to: FKAERLLCACLEQQV*TPMVSAGVPGWHMG
Trigger: GCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCAATCTTTCAGCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 90 bp AGAAGCATGGCCTGGAAAGGAGTGCTGGGATTGGCACAGAGGCCTTaGTTGAGCTCCTGCATTGTATTACTCGGTAGAGTGAGGCCCAGA +
Preference number: 1 (lower is better)
Translates to: RSMAWKGVLGLAQRP*LSSCIVLLGRVRPR
Trigger: TCTGGGCCTCACTCTACCGAGTAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAATCCCAGCACTCCTTTCCAGGCCATGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 90 bp CTTCATCTAGGTAGTTCCCACAGGAGCCACCACAGCCTGGGATGTTaGGGTGTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCT +
Preference number: 1 (lower is better)
Translates to: LHLGSSHRSHHSLGC*GVPRQCLKWEDMVS
Trigger: AGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCACACCCCAACATCCCAGGCTGTGGTGGCTCCTGTGGGAACTACCTAGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp AGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCTGAGTTaGCAATGGGAATTTAAGGGCTTGGTGGGCCTCCCACGGCTATTC +
Preference number: 1 (lower is better)
Translates to: SWCSRVAYGPKCVLS*QWEFKGLVGLPRLF
Trigger: GAATAGCCGTGGGAGGCCCACCAAGCCCTTAAATTCCCATTGTCAACTCAGAACACATTTGGGCCCATATGCCACCCTGGAACACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 90 bp GAAGCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATaGCAGCCTGTTGCTGACGGAGAACCAGAGACTCAGACAAAGAAA +
Preference number: 1 (lower is better)
Translates to: EALSAPARRNLQGTL*QPVADGEPETQTKK
Trigger: TTTCTTTGTCTGAGTCTCTGGTTCTCCGTCAGCAACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 90 bp AAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCTaGCTTGCTCTGATGGAGATTTTCAGGAGAGAGAGCTCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: KVDTSQSFPLRGFSG*LALMEIFRRESSRE
Trigger: CTCCCTGGAGCTCTCTCTCCTGAAAATCTCCATCAGAGCAAGGCAGCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 90 bp ATAAGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTaGGAACCCACCCGTAGTGGAAAGGGGTGGGTATTTCAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: IRKDPLAHTLPVPCP*EPTRSGKGWVFQEQ
Trigger: CTGCTCCTGAAATACCCACCCCTTTCCACTACGGGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp CGGGCCTGGGCTTCAGGTAGCCTTTCAGATAATACATTTCAAGGCTaGAAGATTGCTTTGTGCTTGTCTGGAGCAGCAGGTGTGGACGCC +
Preference number: 1 (lower is better)
Translates to: RAWASGSLSDNTFQG*KIALCLSGAAGVDA
Trigger: GGCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCAATCTTTCAGCCTTGAAATGTATTATCTGAAAGGCTACCTGAAGCCCAGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR TCA 90 bp AAGGGCAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTaGTCAATGCTAAGACCCAGGCAGGGGTTTGTAAGAGAGCTTCGT +
Preference number: 1 (lower is better)
Translates to: KGRWRWSRLRGEVCH*SMLRPRQGFVRELR
Trigger: ACGAAGCTCTCTTACAAACCCCTGCCTGGGTCTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTaGGGTAAGAAGCATGGCCTGGAAAGGAGTGCTGGGATTGGCACA +
Preference number: 1 (lower is better)
Translates to: RTDGFDKWSGVNKGH*GKKHGLERSAGIGT
Trigger: TGTGCCAATCCCAGCACTCCTTTCCAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 90 bp CTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCTGAATaGTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: LRERGLAMSHLPKPE*SSPRGRIRPRLVPE
Trigger: TTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTCAGGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 90 bp CCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTaGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: PFIDKGVCLMSRLRK*TLPNHSLSGASLAA
Trigger: GGCAGCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR TCA 90 bp CTTCATTGTATCTTAGATCGTCAGAGCTTTGAGGACCCTTTGAGATaGGGGAGGAGGACTTGCATAGGGTCATACAGGGGGCTAAGGGCA +
Preference number: 1 (lower is better)
Translates to: LHCILDRQSFEDPLR*GRRTCIGSYRGLRA
Trigger: TGCCCTTAGCCCCCTGTATGACCCTATGCAAGTCCTCCTCCCTCATCTCAAAGGGTCCTCAAAGCTCTGACGATCTAAGATACAATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR GCA 90 bp GCGAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTaGTTCTATGGCTCTGTGAGAGATCTGGGTTTCTTGGACCTTAGC +
Preference number: 1 (lower is better)
Translates to: AKLDKVVVLTDTPAL*FYGSVRDLGFLDLS
Trigger: GCTAAGGTCCAAGAAACCCAGATCTCTCACAGAGCCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 90 bp TCCAAGCTCAGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTaGTCAGGAGTGAATAAAGGCCACTGGGGTAAGAAGCATGGCCTG +
Preference number: 1 (lower is better)
Translates to: SKLSYTNSRTDGFDK*SGVNKGHWGKKHGL
Trigger: CAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACTGAGCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR TCA 90 bp CACTGCAAACTAGTAAGTGATAGAGCCTGGATTCGGCCTGTGTTCTaGCCACTCTCTTGCTCCATCTCTTTAAAGAGAGTGAAAAGGGGG +
Preference number: 1 (lower is better)
Translates to: HCKLVSDRAWIRPVF*PLSCSISLKRVKRG
Trigger: CCCCCTTTTCACTCTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCTCTATCACTTACTAGTTTGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp ATCAGGGGGAAAATGGCTTCATTGTATCTTAGATCGTCAGAGCTTTaGGGACCCTTTGAGATGAGGGAGGAGGACTTGCATAGGGTCATA +
Preference number: 1 (lower is better)
Translates to: IRGKMASLYLRSSEL*GPFEMREEDLHRVI
Trigger: TATGACCCTATGCAAGTCCTCCTCCCTCATCTCAAAGGGTCCTCAAAGCTCTGACGATCTAAGATACAATGAAGCCATTTTCCCCCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp CATTACAGTTCTTCTTTGGCATTGAAAATGGAGTTTCTGCTAGCTTaGCAAGTGTCTGATGGAGCTGGGTCCCATTGCCACCTTCCCCTT +
Preference number: 1 (lower is better)
Translates to: HYSSSLALKMEFLLA*QVSDGAGSHCHLPL
Trigger: AAGGGGAAGGTGGCAATGGGACCCAGCTCCATCAGACACTTGTCAAGCTAGCAGAAACTCCATTTTCAATGCCAAAGAAGAACTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR GCA 90 bp TGTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATaGCTTGGGATGATTCCAAAACAGCATTACAGTTCTTCTTTGGCA +
Preference number: 1 (lower is better)
Translates to: CAQAVLEMGRYGVLG*LGMIPKQHYSSSLA
Trigger: TGCCAAAGAAGAACTGTAATGCTGTTTTGGAATCATCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp TTCTTTGGCATTGAAAATGGAGTTTCTGCTAGCTTGACAAGTGTCTaGTGGAGCTGGGTCCCATTGCCACCTTCCCCTTACAGAATAAAC +
Preference number: 1 (lower is better)
Translates to: FFGIENGVSASLTSV*WSWVPLPPSPYRIN
Trigger: GTTTATTCTGTAAGGGGAAGGTGGCAATGGGACCCAGCTCCATCAGACACTTGTCAAGCTAGCAGAAACTCCATTTTCAATGCCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp GCAATTGGGGGTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATaGGGTCGCGAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCC +
Preference number: 1 (lower is better)
Translates to: AIGGSEFLISRNAQE*GREVRQGCCPHRYS
Trigger: GGAGTATCTGTGAGGACAACAACCTTGTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTACCCCCAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 90 bp ATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTaGACATTTACTATTGTTCTCCCTCCATGTGGAAGGCCTCCTCCG +
Preference number: 1 (lower is better)
Translates to: MCFCGRSWYNKGHLE*TFTIVLPPCGRPPP
Trigger: CGGAGGAGGCCTTCCACATGGAGGGAGAACAATAGTAAATGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp ACATATGTTTCATGTCTCCCAATAGGAGCTCCTAGAAGGTATAAATaGTACTCTCTTCATCTAGGTAGTTCCCACAGGAGCCACCACAGC +
Preference number: 1 (lower is better)
Translates to: TYVSCLPIGAPRRYK*YSLHLGSSHRSHHS
Trigger: GCTGTGGTGGCTCCTGTGGGAACTACCTAGATGAAGAGAGTATCATTTATACCTTCTAGGAGCTCCTATTGGGAGACATGAAACATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 90 bp GGAAGATCAATTTCTATAAAACAGAAGACAGGAACTTGGAGCTTCTaGTCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAA +
Preference number: 1 (lower is better)
Translates to: GRSISIKQKTGTWSF*SLGGLISWSSGGHK
Trigger: TTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATCAGAAGCTCCAAGTTCCTGTCTTCTGTTTTATAGAAATTGATCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTaGTATAATAAAGGACATCTTGAGTGGACATTTACTATTGTTCTC +
Preference number: 1 (lower is better)
Translates to: SQKKSPLDMCFCGRS*YNKGHLEWTFTIVL
Trigger: GAGAACAATAGTAAATGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGAGGTGTGGACGCCCATaGTGTCAGCTGGTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQRCGRP*CQLVFQ
Trigger: CTGGAACACCAGCTGACACCATGGGCGTCCACACCT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGCTGGCAGGATTTGGGTaGCTTCTAATGTGCCCACCC +
Preference number: 2 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQLAGFG*LLMCPP
Trigger: GGGTGGGCACATTAGAAGTCACCCAAATCCTGCCAG...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGAACACAGGTCTCCTaGCTGGAGCCTTTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQGTQVS*LEPFPY
Trigger: ATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCC...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGAATTTAAGGGCTTGGTaGGCCTCCCACGGCTATTCT +
Preference number: 2 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQNLRAW*ASHGYS
Trigger: AGAATAGCCGTGGGAGGCCCACCAAGCCCTTAAATT...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCTGGAGCAGCAGGTGTaGACGCCCATGGTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVLEQQV*TPMVSA
Trigger: AGCTGACACCATGGGCGTCCACACCTGCTGCTCCAG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTACTGCCTGCCATGGGTaGGCCTCTGATTCCTTTGAC +
Preference number: 2 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVTACHG*ASDSFD
Trigger: GTCAAAGGAATCAGAGGCTCACCCATGGCAGGCAGT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGGAGATGGTCAAGGTTaGGGGGAGAGGTGTGTCACT +
Preference number: 2 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEGDGQG*GERCVT
Trigger: AGTGACACACCTCTCCCCTCAACCTTGACCATCTCC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCGTGTGCTGTCGGAAGTaGGGTGTAGCTTCGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGVCCRK*GVASLR
Trigger: CCTGAGCGAAGCTACACCGCACTTCCGACAGCACAC...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCTCCCACGGCTATTCTaGTCCCAGCAGTCAGCACAA +
Preference number: 2 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVLPRLF*SQQSAQ
Trigger: TTGTGCTGACTGCTGGGAGCAGAATAGCCGTGGGAG...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCCTGGAAAGGAGTGCTaGGATTGGCACAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVPGKEC*DWHRGL
Trigger: AAGGCCTCTGTGCCAATCCCAGCACTCCTTTCCAGG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCGAACATCCTGCGGGGTaGATTCTCCGCCCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGEHPAG*ILRPAH
Trigger: ATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTC...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATACCTGTCCCATGTCCTTaGGAACCCACCCGTAGTGGA +
Preference number: 2 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIPVPCP*EPTRSG
Trigger: TCCACTACGGGTGGGTTCCCAAGGACATGGGACAGG...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 90 bp AGCATGGCCTGGAAAGGAGTGCTGGGATTGGCACAGAGGCCTTGGTaGAGCTCCTGCATTGTATTACTCGGTAGAGTGAGGCCCAGACAG +
Preference number: 2 (lower is better)
Translates to: SMAWKGVLGLAQRPW*SSCIVLLGRVRPRQ
Trigger: CTGTCTGGGCCTCACTCTACCGAGTAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAATCCCAGCACTCCTTTCCAGGCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CAA 90 bp CAGGGCCCAGAGCAGATGCTCTGCTTAGGAATAAGGAAGGATCCTTaGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCCGT +
Preference number: 2 (lower is better)
Translates to: QGPEQMLCLGIRKDP*AHTLPVPCPWEPTR
Trigger: ACGGGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCTTATTCCTAAGCAGAGCATCTGCTCTGGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCACTGCCTGCCATGGGTaGGCCTCTGATTCCTTTGAC +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGTACHG*ASDSFD
Trigger: GTCAAAGGAATCAGAGGCTCACCCATGGCAGGCAGT...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCATCGTCCTCTGCTACTaGCTGCCCACAGCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCIVLCY*LPTAGG
Trigger: ACCACCAGCTGTGGGCAGTCAGTAGCAGAGGACGAT...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCGCCCATGGTGTCAGCTaGTGTTCCAGGGTGGCATAT +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGAHGVS*CSRVAY
Trigger: ATATGCCACCCTGGAACACCAGCTGACACCATGGGC...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCTGCTTTGTGCTTGTCTaGAGCAGCAGGTGTGGACGC +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGCFVLV*SSRCGR
Trigger: GCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCA...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCGAACATCCTGCGGGGTaGATTCTCCGCCCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFEHPAG*ILRPAH
Trigger: ATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTC...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAGTGTGCTGTCGGAAGTaGGGTGTAGCTTCGCTCAGG +
Preference number: 2 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRVCCRK*GVASLR
Trigger: CCTGAGCGAAGCTACACCGCACTTCCGACAGCACAC...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp TTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTGGAGTGATCCATTTCTaGATGTCTGCATTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LGGVSSREWHLSLQTAQGGVIHF*MSALCG
Trigger: CCCACACAATGCAGACATCCAGAAATGGATCACTCC...ACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR CCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGGGAGTGATCCATTTCTaGATGTCTGCATTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SAPILIHMERGTGVLWVGGVIHF*MSALCG
Trigger: CCCACACAATGCAGACATCCAGAAATGGATCACTCC...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
3UTR-3UTR CCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTAATTTAAGGGCTTGGTaGGCCTCCCACGGCTATTCT +
Preference number: 2 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVNLRAW*ASHGYS
Trigger: AGAATAGCCGTGGGAGGCCCACCAAGCCCTTAAATT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CAA 90 bp CAGATGCTCTGCTTAGGAATAAGGAAGGATCCTTTGGCTCACACTTaGCCTGTCCCATGTCCTTGGGAACCCACCCGTAGTGGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: QMLCLGIRKDPLAHT*PVPCPWEPTRSGKG
Trigger: CCCCTTTCCACTACGGGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCTTATTCCTAAGCAGAGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCGTGAATAAAGGCCACTaGGGTAAGAAGCATGGCCTG +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGVNKGH*GKKHGL
Trigger: CAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCAC...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCCGTAGTGGAAAGGGGTaGGTATTTCAGGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCRSGKG*VFQEQQ
Trigger: CTGCTGCTCCTGAAATACCCACCCCTTTCCACTACG...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAAAGAGTATAGGGGCCTaGGGTACAAACTACCAGGGC +
Preference number: 2 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGKSIGA*GTNYQG
Trigger: GCCCTGGTAGTTTGTACCCCAGGCCCCTATACTCTT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 90 bp CCAGGCATGAAGGTGCTCCAAGGGATCACACTAAGAGAGAGGGGCTaGGCTATGAGCCATCTCCCAAAACCTGAATGCTCTTCTCCTAGA +
Preference number: 2 (lower is better)
Translates to: PGMKVLQGITLRERG*AMSHLPKPECSSPR
Trigger: TCTAGGAGAAGAGCATTCAGGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGGAGCACCTTCATGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CAA 90 bp TCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTCCTTaGACTCTGAAAAATGAAGGAGTGGGTCCCTCTGAACATCCTGCG +
Preference number: 2 (lower is better)
Translates to: SWLFSLPAMGEPLIP*TLKNEGVGPSEHPA
Trigger: CGCAGGATGTTCAGAGGGACCCACTCCTTCATTTTTCAGAGTCAAAGGAATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTATAAGTGGTCAGGAGTaGATAAAGGCCACTGGGGTA +
Preference number: 2 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIISGQE*IKATGV
Trigger: TACCCCAGTGGCCTTTATTCACTCCTGACCACTTAT...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGGAGGACCCTTTGAGATaGGGGAGGAGGACTTGCATA +
Preference number: 2 (lower is better)
Translates to: SWTLAAVQELAQLISACREDPLR*GRRTCI
Trigger: TATGCAAGTCCTCCTCCCTCATCTCAAAGGGTCCTC...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAGGAACACAGGTCTCCTaGCTGGAGCCTTTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRGTQVS*LEPFPY
Trigger: ATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCC...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGACCTGGCTCTTTTCACTaGCTGCCATGGGTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: LFPLETPDGSNNAEALYRPGSFH*LPWVSL
Trigger: GAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGG...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAATCCTCTGCTACTGACTaGCCACAGCTGGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: DPLEGLYLGALEGIKSLESSATD*PQLVVL
Trigger: CAGCACCACCAGCTGTGGGCAGTCAGTAGCAGAGGA...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATAAGAGATGAAGTCACCTaGCCAGCACTGCAAACTAGT +
Preference number: 2 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIRDEVT*PALQTS
Trigger: ACTAGTTTGCAGTGCTGGGCAGGTGACTTCATCTCT...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAACCAGGGCCCACCTCATaGAGCCCAGTTTCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEPGPTS*SPVSQE
Trigger: TTCTTGGGAAACTGGGCTGCATGAGGTGGGCCCTGG...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCGTAAGAAGCATGGCCTaGAAAGGAGTGCTGGGATTG +
Preference number: 2 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTVRSMA*KGVLGL
Trigger: CAATCCCAGCACTCCTTTCCAGGCCATGCTTCTTAC...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp GTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCAATGCAAAGATTCTCTaGCATGTGTGTCCAGATGTT +
Preference number: 2 (lower is better)
Translates to: VVSLAENGTSVSRLPRVLNAKIL*HVCPDV
Trigger: AACATCTGGACACACATGTCAGAGAATCTTTGCATT...GAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR TCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGGGAACTTGGAGCTTCTaGTCCCTTGGAGGGCTTATA +
Preference number: 2 (lower is better)
Translates to: SWTLAAVQELAQLISACRGTWSF*SLGGLI
Trigger: TATAAGCCCTCCAAGGGATCAGAAGCTCCAAGTTCC...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTCCTTGGTTGAGCTCCTaGATTGTATTACTCGGTAGA +
Preference number: 2 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIPWLSS*IVLLGR
Trigger: TCTACCGAGTAATACAATGCAGGAGCTCAACCAAGG...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTGGCCTGGAAAGGAGTaGTGGGATTGGCACAGAGGC +
Preference number: 2 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHWPGKE*WDWHRG
Trigger: GCCTCTGTGCCAATCCCAGCACTCCTTTCCAGGCCA...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATCTGCAGGGGACCTTATaGCAGCCTGTTGCTGACGGA +
Preference number: 2 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHLQGTL*QPVADG
Trigger: TCCGTCAGCAACAGGCTGGCATAAGGTCCCCTGCAG...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAGAAAGGAGAAATGGCTaGTTTCATCGGAGGATCGTC +
Preference number: 2 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGERRNG*FHRRIV
Trigger: GACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTC...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGATTGGCACAGAGGCCTTaGTTGAGCTCCTGCATTGTA +
Preference number: 2 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRLAQRP*LSSCIV
Trigger: TACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAA...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCCAGCAGGACACAGTGTaGGTCTTTTCTTTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFQQDTV*VFSFSR
Trigger: CCTGGAAAAAGAAAAGACCCACACTGTGTCCTGCTG...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CAA 90 bp GGGCTTCAGGTAGCCTTTCAGATAATACATTTCAAGGCTGAAAGATaGCTTTGTGCTTGTCTGGAGCAGCAGGTGTGGACGCCCATGGTG +
Preference number: 2 (lower is better)
Translates to: GLQVAFQIIHFKAER*LCACLEQQVWTPMV
Trigger: CACCATGGGCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCAATCTTTCAGCCTTGAAATGTATTATCTGAAAGGCTACCTGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCGAGAAACCCCAGGCATaGAGGTGCTCCAAGGGATCA +
Preference number: 2 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFEKPQA*RCSKGS
Trigger: TGATCCCTTGGAGCACCTTCATGCCTGGGGTTTCTC...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCCCTATACCACACTCTaGCTCTCAGGGTCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLPYTTL*LSGSWG
Trigger: CCCCCAGGACCCTGAGAGGCAGAGTGTGGTATAGGG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTTTCTTCCATTTTCCTaGCCAAAAGCACAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFFLPFS*PKAQQD
Trigger: GTCCTGCTGTGCTTTTGGGCAGGAAAATGGAAGAAA...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGCTTTGGCTCACACTTTaGCTGTCCCATGTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWLWLTL*LSHVLG
Trigger: CCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAG...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGACACAGGTCTCCTGCCTaGAGCCTTTTCCCTATACCA +
Preference number: 2 (lower is better)
Translates to: LFPLETPDGSNNAEALYRHRSPA*SLFPIP
Trigger: TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTG...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTGCTTTGTGCTTGTCTaGAGCAGCAGGTGTGGACGC +
Preference number: 2 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHCFVLV*SSRCGR
Trigger: GCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCA...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCCCATATTCGGGCCTaGGCTTCAGGTAGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPHIRA*ASGSLS
Trigger: TGAAAGGCTACCTGAAGCCCAGGCCCGAATATGGGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATAGAACCCAGGACTCCTaGCTCTTTTCACTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHRTQDS*LFSLPA
Trigger: GGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CAA 90 bp GAATTTGCTTTCACACACGTAGCAGCTTCAACTGCTGAGATCATGTaGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGT +
Preference number: 2 (lower is better)
Translates to: EFAFTHVAASTAEIM*FSTHSNPHGKGHGG
Trigger: ACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTGCTACGTGTGTGAAAGCAAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR TCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCCAGGGGTCTTGGGAGTaGTCCATTTCTGGATGTCTG +
Preference number: 2 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCQGSWE*SISGCL
Trigger: CAGACATCCAGAAATGGATCACTCCCAAGACCCCTG...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR TCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATGCATCAAAGTTCCTTTaGACCGATTGTAATTTTTGC +
Preference number: 2 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYASKFL*TDCNFC
Trigger: GCAAAAATTACAATCGGTTCAAAGGAACTTTGATGC...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCCATTTCTGGATGTCTaGATTGTGTGGGGTCCCGTC +
Preference number: 2 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGPFLDV*IVWGPV
Trigger: GACGGGACCCCACACAATGCAGACATCCAGAAATGG...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
3UTR-3UTR GCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATACAGCAGCATTTTGTCTaGATCAAAGTTCCTTTGAAC +
Preference number: 2 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIQQHFV*IKVPLN
Trigger: GTTCAAAGGAACTTTGATGCAGACAAAATGCTGCTG...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGCTTGGAAAACACTTATaGCCTTGCAAGATGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SWTLAAVQELAQLISACRLGKHL*PCKMRE
Trigger: CTCCCTCATCTTGCAAGGCCATAAGTGTTTTCCAAG...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAACTTCCTGAGAGAGGATaGGAGAGGCATTTTGCTTGG +
Preference number: 2 (lower is better)
Translates to: DPLEGLYLGALEGIKSLELPERG*ERHFAW
Trigger: CCAAGCAAAATGCCTCTCCCATCCTCTCTCAGGAAG...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 90 bp TTTATTCAACTGACACTTGTCTTTAGTAGCCAGCCCATCTCTTCTTaGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACT +
Preference number: 2 (lower is better)
Translates to: FIQLTLVFSSQPISS*GGVSSREWHLSLQT
Trigger: AGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTGGCTACTAAAGACAAGTGTCAGTTGAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR CAA 90 bp TTGGGGTGTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTaGGGATGCCTTGGGATGATTCCAAAACAGCATTACAGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LGCAQAVLEMGRYGV*GCLGMIPKQHYSSS
Trigger: AGAAGAACTGTAATGCTGTTTTGGAATCATCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCACACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 90 bp GGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATTTACTATaGTTCTCCCTCCATGTGGAAGGCCTCCTCCGTCTTACCTGTGGA +
Preference number: 2 (lower is better)
Translates to: GGAGIIKDILSGHLL*FSLHVEGLLRLTCG
Trigger: TCCACAGGTAAGACGGAGGAGGCCTTCCACATGGAGGGAGAACAATAGTAAATGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAACAGGGGTCTTGGGAGTaGTCCATTTCTGGATGTCTG +
Preference number: 2 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEQGSWE*SISGCL
Trigger: CAGACATCCAGAAATGGATCACTCCCAAGACCCCTG...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
3UTR-3UTR TCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCTGGCAGGATTTGGGTaGCTTCTAATGTGCCCACCC +
Preference number: 2 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLLAGFG*LLMCPP
Trigger: GGGTGGGCACATTAGAAGTCACCCAAATCCTGCCAG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGCCATTTCTGGATGTCTaGATTGTGTGGGGTCCCGTC +
Preference number: 2 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKPFLDV*IVWGPV
Trigger: GACGGGACCCCACACAATGCAGACATCCAGAAATGG...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
3UTR-3UTR GCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTAGGAAAATATACAGATaGGGCATTCAGTTCAATGTT +
Preference number: 2 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVRKIYR*GIQFNV
Trigger: AACATTGAACTGAATGCCGCATCTGTATATTTTCCT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGGAGCTTCTGATCCCTTaGAGGGCTTATATCTTGGAG +
Preference number: 2 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWELLIP*RAYILE
Trigger: CTCCAAGATATAAGCCCTCCAAGGGATCAGAAGCTC...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 90 bp CATAAAGTCTCTAGAAGCTTCCTGAGAGAGGATGGGAGAGGCATTTaGCTTGGAAAACACTTATGGCCTTGCAAGATGAGGGAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: HKVSRSFLREDGRGI*LGKHLWPCKMREFR
Trigger: CCTGAACTCCCTCATCTTGCAAGGCCATAAGTGTTTTCCAAGCAAAATGCCTCTCCCATCCTCTCTCAGGAAGCTTCTAGAGACTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCAGCAGCTTCAACTGCTaGGATCATGTTGTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCSSFNC*DHVVQH
Trigger: GTGCTGAACAACATGATCTCAGCAGTTGAAGCTGCT...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACGGAGAGGTGTGTCACTaGTCAATGCTAAGACCCAGG +
Preference number: 2 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDGEVCH*SMLRPR
Trigger: CCTGGGTCTTAGCATTGATCAGTGACACACCTCTCC...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGCTTTGAGGACCCTTTaGGATGAGGGAGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTALRTL*DEGGGL
Trigger: AAGTCCTCCTCCCTCATCTCAAAGGGTCCTCAAAGC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACAGCTTGACAAGTGTCTaGTGGAGCTGGGTCCCATTG +
Preference number: 2 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDSLTSV*WSWVPL
Trigger: CAATGGGACCCAGCTCCATCAGACACTTGTCAAGCT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATTCTGGGAAGCCTTCTTaGTTGATATCTCCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNSGKPS*LISPPP
Trigger: TGGGGGAGGAGATATCAATCAAGAAGGCTTCCCAGA...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCAGGAAAATATACAGATaGGGCATTCAGTTCAATGTT +
Preference number: 2 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGRKIYR*GIQFNV
Trigger: AACATTGAACTGAATGCCGCATCTGTATATTTTCCT...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGTCACCTGCCCAGCACTaGAAACTAGTAAGTGATAGA +
Preference number: 2 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWSPAQH*KLVSDR
Trigger: TCTATCACTTACTAGTTTGCAGTGCTGGGCAGGTGA...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGATGGGAGAGGCATTTTaGTTGGAAAACACTTATGGC +
Preference number: 2 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLMGEAF*LENTYG
Trigger: GCCATAAGTGTTTTCCAAGCAAAATGCCTCTCCCAT...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCACAGGGAAAGAGACTTaGACAAGCTCAGGAACACAG +
Preference number: 2 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFTGKET*TSSGTQ
Trigger: CTGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTGT...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACAAGGGCAGATGGAGATaGTCAAGGTTGAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDKGRWR*SRLRGE
Trigger: CTCTCCCCTCAACCTTGACCATCTCCATCTGCCCTT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATGTTCTCCCTCCATGTaGAAGGCCTCCTCCGTCTTA +
Preference number: 2 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTCSPSM*KASSVL
Trigger: TAAGACGGAGGAGGCCTTCCACATGGAGGGAGAACA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACAGCCCTCTGCTTCTATaGCTCTGTGAGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDSPLLL*LCERSG
Trigger: CCCAGATCTCTCACAGAGCCATAGAAGCAGAGGGCT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGATGAGGGTGAAGATTaGTGTTGGGCAAGTTGCACG +
Preference number: 2 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTDEGED*CWASCT
Trigger: CGTGCAACTTGCCCAACATCAATCTTCACCCTCATC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAAGATCGTCAGAGCTTTaGGGACCCTTTGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTRSSEL*GPFEMR
Trigger: CCTCATCTCAAAGGGTCCTCAAAGCTCTGACGATCT...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAGATACCTGCTCTATTaGCCAGTAATGGATAGGCCG +
Preference number: 2 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNRYLLY*PVMDRP
Trigger: CGGCCTATCCATTACTGGGCAATAGAGCAGGTATCT...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACCTAGAACCAGGTGTCTaGCTTCCCAAACCACAATCC +
Preference number: 2 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDLEPGV*LPKPQS
Trigger: GGATTGTGGTTTGGGAAGGCAGACACCTGGTTCTAG...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAACCGATTGTAATTTTTaGCTTTTGGTTACATTGGCT +
Preference number: 2 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGTDCNF*LLVTLA
Trigger: AGCCAATGTAACCAAAAGGCAAAAATTACAATCGGT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGTTGGCACAGAGGCCTTaGTTGAGCTCCTGCATTGTA +
Preference number: 2 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLLAQRP*LSSCIV
Trigger: TACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAA...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGGTGAATAAAGGCCACTaGGGTAAGAAGCATGGCCTG +
Preference number: 2 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLVNKGH*GKKHGL
Trigger: CAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCAC...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATGCATTTAAGGGCAGATaGAGATGGTCAAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNAFKGR*RWSRLR
Trigger: CCTCAACCTTGACCATCTCCATCTGCCCTTAAATGC...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGGAGAGGCATTTTGCTTaGAAAACACTTATGGCCTTG +
Preference number: 2 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWERHFA*KTLMAL
Trigger: CAAGGCCATAAGTGTTTTCCAAGCAAAATGCCTCTC...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 90 bp TGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTaGAGTGGACATTTACTATTGTTCTCCCTCCATGTGGAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: WTCVFVGGAGIIKDI*SGHLLLFSLHVEGL
Trigger: GAGGCCTTCCACATGGAGGGAGAACAATAGTAAATGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCTCCCAAAACCTGAATaGTCTTCTCCTAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLLPKPE*SSPRGR
Trigger: CCTTCCTCTAGGAGAAGAGCATTCAGGTTTTGGGAG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR GCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGAGAAGTCAGTATTTGTaGACAAACCTTGAGGCCATT +
Preference number: 2 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWRSQYL*TNLEAI
Trigger: AATGGCCTCAAGGTTTGTGCACAAATACTGACTTCT...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCGATGGGTTTGATAAGTaGTCAGGAGTGAATAAAGGC +
Preference number: 2 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFDGFDK*SGVNKG
Trigger: GCCTTTATTCACTCCTGACCACTTATCAAACCCATC...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGGAGGGCTTATATCTTaGAGCTCTGGAGGGCATAAA +
Preference number: 2 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTGGLIS*SSGGHK
Trigger: TTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGAAAGGACATCTTGAGTaGACATTTACTATTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SWTLAAVQELAQLISACRKGHLE*TFTIVL
Trigger: GAGAACAATAGTAAATGTCCACTCAAGATGTCCTTT...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGAGAGTTTCTGCTAGCTTaGCAAGTGTCTGATGGAGCT +
Preference number: 2 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGEFLLA*QVSDGA
Trigger: AGCTCCATCAGACACTTGTCAAGCTAGCAGAAACTC...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGTTTCTTCCATTTTCCTaGCCAAAAGCACAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLFLPFS*PKAQQD
Trigger: GTCCTGCTGTGCTTTTGGGCAGGAAAATGGAAGAAA...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR TCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCAATACATTTCAAGGCTaGAAGATTGCTTTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFNTFQG*KIALCL
Trigger: CAAGCACAAAGCAATCTTTCAGCCTTGAAATGTATT...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CCA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTGGGCAAACCCTCAAGTaGAGAATTTGCTTTCACACA +
Preference number: 2 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCGQTLK*RICFHT
Trigger: TGTGTGAAAGCAAATTCTCCACTTGAGGGTTTGCCC...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR TCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACCTAAGGTGCATTTATTaGAAACAGTGTATGCTATGC +
Preference number: 2 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDLRCIY*KQCMLC
Trigger: GCATAGCATACACTGTTTTCAATAAATGCACCTTAG...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR TCA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACCTAGAAGGTATAAATaGTACTCTCTTCATCTAGGT +
Preference number: 2 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGPRRYK*YSLHLG
Trigger: ACCTAGATGAAGAGAGTATCATTTATACCTTCTAGG...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR GCA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGAAAACAGTGTATGCTATaGACTCTGTTAAGTGCTATG +
Preference number: 2 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGKQCML*TLLSAM
Trigger: CATAGCACTTAACAGAGTGCATAGCATACACTGTTT...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CCA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGATTATCAGGGGGAAAATaGCTTCATTGTATCTTAGAT +
Preference number: 2 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGLSGGK*LHCILD
Trigger: ATCTAAGATACAATGAAGCCATTTTCCCCCTGATAA...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGTGGGAATTTAAGGGCTaGGTGGGCCTCCCACGGCTA +
Preference number: 3 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQWEFKG*VGLPRL
Trigger: TAGCCGTGGGAGGCCCACCAAGCCCTTAAATTCCCA...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp GCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTaGCCACAGCTGGTGGTGCTGGGGCTGAGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: AAFIGGSSSATD*PQLVVLGLRSQ
Trigger: TTGGCTCCTCAGCCCCAGCACCACCAGCTGTGGGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGATTGGCACAGAGGCCTaGGTTGAGCTCCTGCATTGT +
Preference number: 3 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQIGTEA*VELLHC
Trigger: ACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAAT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGCACAGAGGCCTTGGTaGAGCTCCTGCATTGTATTA +
Preference number: 3 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQAQRPW*SSCIVL
Trigger: TAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGC...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGAAGATTGCTTTGTGCTaGTCTGGAGCAGCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQKIALC*SGAAGV
Trigger: CACACCTGCTGCTCCAGACAAGCACAAAGCAATCTT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp GGGCTAAGGGCAGAGCTAGTTCTAGAACCAGGTGTCTaGCTTCCCAAACCACAATCCCCAGGCTCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: GLRAELVLEPGV*LPKPQSPGSLL
Trigger: CAGGAGGGAGCCTGGGGATTGTGGTTTGGGAAGGCAGACACCTGGTTCTAGAACTAGCTCTGCCCTTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 72 bp CCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATaGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCCC +
Preference number: 3 (lower is better)
Translates to: PISSLGGVSSRE*HLSLQTAQGSP
Trigger: GGGAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR CCA 72 bp TCTGGAGCAGCAGGTGTGGACGCCCATGGTGTCAGCTaGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTT +
Preference number: 3 (lower is better)
Translates to: SGAAGVDAHGVS*CSRVAYGPKCV
Trigger: AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTCCACACCTGCTGCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp AGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATaGCAGCCTGTTGCTGACGGAGAACCAGAGACTCAG +
Preference number: 3 (lower is better)
Translates to: SAPARRNLQGTL*QPVADGEPETQ
Trigger: CTGAGTCTCTGGTTCTCCGTCAGCAACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 72 bp GAAAGATTGCTTTGTGCTTGTCTGGAGCAGCAGGTGTaGACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: ERLLCACLEQQV*TPMVSAGVPGW
Trigger: CCACCCTGGAACACCAGCTGACACCATGGGCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCAATCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp GTGCTGGGATTGGCACAGAGGCCTTGGTTGAGCTCCTaGATTGTATTACTCGGTAGAGTGAGGCCCAGACAG +
Preference number: 3 (lower is better)
Translates to: VLGLAQRPWLSS*IVLLGRVRPRQ
Trigger: CTGTCTGGGCCTCACTCTACCGAGTAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAATCCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGCACAGAGGCCTTGGTaGAGCTCCTGCATTGTATTA +
Preference number: 3 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVAQRPW*SSCIVL
Trigger: TAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 72 bp AGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTaGAGCCTTTTCCCTATACCACACTCTGCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: RLGQAQEHRSPA*SLFPIPHSASQ
Trigger: CTGAGAGGCAGAGTGTGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 72 bp GATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTaGGAACCCACCCGTAGTGGAAAGGGGTGGGTATTT +
Preference number: 3 (lower is better)
Translates to: DPLAHTLPVPCP*EPTRSGKGWVF
Trigger: AAATACCCACCCCTTTCCACTACGGGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCATTGGCACAGAGGCCTaGGTTGAGCTCCTGCATTGT +
Preference number: 3 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTIGTEA*VELLHC
Trigger: ACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAAT...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGCCTTTGGCTCACACTTaGCCTGTCCCATGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: SWTLAAVQELAQLISACRPLAHT*PVPCPW
Trigger: CCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGG...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp GGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCTaGGTTGACAATGGGAATTTAAGGGCTTGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: GVPGWHMGPNVF*VDNGNLRAWWA
Trigger: GGCCCACCAAGCCCTTAAATTCCCATTGTCAACTCAGAACACATTTGGGCCCATATGCCACCCTGGAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp AAAGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTaGCTGGAGCCTTTTCCCTATACCACACTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: KETWTSSGTQVS*LEPFPYTTLCL
Trigger: GAGGCAGAGTGTGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp ACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCTaGCTTGCTCTGATGGAGATTTTCAGGAGAGAGAGC +
Preference number: 3 (lower is better)
Translates to: TSQSFPLRGFSG*LALMEIFRRES
Trigger: GCTCTCTCTCCTGAAAATCTCCATCAGAGCAAGGCAGCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CCA 72 bp GGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTaGGGTAAGAAGCATGGCCTGGAAAGGAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GFDKWSGVNKGH*GKKHGLERSAG
Trigger: CCCAGCACTCCTTTCCAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCGACAGGGAAAGAGACTaGGACAAGCTCAGGAACACA +
Preference number: 3 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTDRERD*DKLRNT
Trigger: TGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTGTC...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGAGCAGCAGCAGCATTTaGTCTGCATCAAAGTTCCTT +
Preference number: 3 (lower is better)
Translates to: HLWPCKMREFRVRLRGEESSSSI*SASKFL
Trigger: AAGGAACTTTGATGCAGACAAAATGCTGCTGCTGCT...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAGGAGCTTCTGATCCCTaGGAGGGCTTATATCTTGGA +
Preference number: 3 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGGASDP*EGLYLG
Trigger: TCCAAGATATAAGCCCTCCAAGGGATCAGAAGCTCC...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR GCA 72 bp AGGGGCTTGGCTATGAGCCATCTCCCAAAACCTGAATaGTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: RGLAMSHLPKPE*SSPRGRIRPRL
Trigger: TAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTCAGGTTTTGGGAGATGGCTCATAGCCAAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACTCGGGGAACGGCTGCTaGGGGTCAGCTGTGGACATA +
Preference number: 3 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDSGNGC*GSAVDI
Trigger: TATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGA...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp AAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTGCTaGCGGAGAACCAGAGACTCAGACAAAGAAAATGAT +
Preference number: 3 (lower is better)
Translates to: KEPAGDLMPACC*RRTRDSDKEND
Trigger: ATCATTTTCTTTGTCTGAGTCTCTGGTTCTCCGTCAGCAACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR GCA 72 bp CTGAAGTTCGAAGAGATGAAGTCACCTGCCCAGCACTaGAAACTAGTAAGTGATAGAGCCTGGATTCGGCCT +
Preference number: 3 (lower is better)
Translates to: LKFEEMKSPAQH*KLVSDRAWIRP
Trigger: AGGCCGAATCCAGGCTCTATCACTTACTAGTTTGCAGTGCTGGGCAGGTGACTTCATCTCTTCGAACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR GCA 72 bp GACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTaGTTCTATGGCTCTGTGAGAGATCTGGGTTTCTTG +
Preference number: 3 (lower is better)
Translates to: DKVVVLTDTPAL*FYGSVRDLGFL
Trigger: CAAGAAACCCAGATCTCTCACAGAGCCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 72 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTaGACACTTCCCAATCATTCCCTCTCAGGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: DKGVCLMSRLRK*TLPNHSLSGAS
Trigger: AGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAAAGATTGCTTTGTGCTaGTCTGGAGCAGCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: LFPLETPDGSNNAEALYRKIALC*SGAAGV
Trigger: CACACCTGCTGCTCCAGACAAGCACAAAGCAATCTT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATTGGAGATGGTCAAGGTaGAGGGGAGAGGTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNWRWSR*RGEVCH
Trigger: GTGACACACCTCTCCCCTCAACCTTGACCATCTCCA...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCGGGAAAATGGCTTCATaGTATCTTAGATCGTCAGAG +
Preference number: 3 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCGKMAS*YLRSSE
Trigger: CTCTGACGATCTAAGATACAATGAAGCCATTTTCCC...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACTGGAGCTGGGTCCCATaGCCACCTTCCCCTTACAGA +
Preference number: 3 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDWSWVP*PPSPYR
Trigger: TCTGTAAGGGGAAGGTGGCAATGGGACCCAGCTCCA...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCTCTGTGAGTTATTATTaGCTTTACCTACTCATGGTG +
Preference number: 3 (lower is better)
Translates to: QPISSLGGVSSREWHLSLSVSYY*LYLLMV
Trigger: CACCATGAGTAGGTAAAGCAAATAATAACTCACAGA...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR-3UTR CAA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGGTTCTGACCACTCTCTaGCTCCATCTCTTTAAAGAG +
Preference number: 3 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLVLTTL*LHLFKE
Trigger: CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAAC...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGATAAGGAAGGATCCTTaGGCTCACACTTTGCCTGTC +
Preference number: 3 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWIRKDP*AHTLPV
Trigger: GACAGGCAAAGTGTGAGCCAAAGGATCCTTCCTTAT...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp CTAGTAAGTGATAGAGCCTGGATTCGGCCTGTGTTCTaGCCACTCTCTTGCTCCATCTCTTTAAAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: LVSDRAWIRPVF*PLSCSISLKRV
Trigger: CACTCTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCTCTATCACTTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACACAGAAGACAGGAACTaGGAGCTTCTGATCCCTTGG +
Preference number: 3 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDTEDRN*ELLIPW
Trigger: CCAAGGGATCAGAAGCTCCAAGTTCCTGTCTTCTGT...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 72 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTaGTCAGGAGTGAATAAAGGCCACTGGGGTAAGAAG +
Preference number: 3 (lower is better)
Translates to: SYTNSRTDGFDK*SGVNKGHWGKK
Trigger: CTTCTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR-3UTR CAA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGATTCTGGGAAGCCTTCTaGATTGATATCTCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGFWEAF*IDISSP
Trigger: GGGGGAGGAGATATCAATCAAGAAGGCTTCCCAGAA...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp AATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTaGCATGTGTGTCCAGATGTTCAGACGGAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: NRSGSPFNAKIL*HVCPDVQTEAE
Trigger: CTCTGCTTCCGTCTGAACATCTGGACACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR TCA 72 bp TCTTGCTCCATCTCTTTAAAGAGAGTGAAAAGGGGGTaGAGATACCTGCTCTATTGCCCAGTAATGGATAGG +
Preference number: 3 (lower is better)
Translates to: SCSISLKRVKRG*RYLLYCPVMDR
Trigger: CCTATCCATTACTGGGCAATAGAGCAGGTATCTTCACCCCCTTTTCACTCTCTTTAAAGAGATGGAGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp TCATGTCTCCCAATAGGAGCTCCTAGAAGGTATAAATaGTACTCTCTTCATCTAGGTAGTTCCCACAGGAGC +
Preference number: 3 (lower is better)
Translates to: SCLPIGAPRRYK*YSLHLGSSHRS
Trigger: GCTCCTGTGGGAACTACCTAGATGAAGAGAGTATCATTTATACCTTCTAGGAGCTCCTATTGGGAGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp GGTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATaGGGTCGCGAAGTTAGACAAGGTTGTTGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: GSEFLISRNAQE*GREVRQGCCPH
Trigger: GTGAGGACAACAACCTTGTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 72 bp TGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTaGACATTTACTATTGTTCTCCCTCCATGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: CGRSWYNKGHLE*TFTIVLPPCGR
Trigger: CCTTCCACATGGAGGGAGAACAATAGTAAATGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTAAGGTGCATTTATaGAAAACAGTGTATGCTATG +
Preference number: 3 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEAKVHL*KTVYAM
Trigger: CATAGCATACACTGTTTTCAATAAATGCACCTTAGC...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGATGGGAGAGGCATTTaGCTTGGAAAACACTTATGG +
Preference number: 3 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDDGRGI*LGKHLW
Trigger: CCATAAGTGTTTTCCAAGCAAAATGCCTCTCCCATC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp ATTTCTATAAAACAGAAGACAGGAACTTGGAGCTTCTaGTCCCTTGGAGGGCTTATATCTTGGAGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: ISIKQKTGTWSF*SLGGLISWSSG
Trigger: TCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATCAGAAGCTCCAAGTTCCTGTCTTCTGTTTTATAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CCA 72 bp TTTGGTGTTGGTTCTGATCCCAGAAAAAGAGTCCACTaGACATGTGTTTTTGTGGGAGGAGCTGGTATAATA +
Preference number: 3 (lower is better)
Translates to: FGVGSDPRKRVH*TCVFVGGAGII
Trigger: TATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGATCAGAACCAACACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGGAGCCTCTGATTCCTTaGACTCTGAAAAATGAAGGA +
Preference number: 3 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLEPLIP*TLKNEG
Trigger: TCCTTCATTTTTCAGAGTCAAAGGAATCAGAGGCTC...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR TCA 72 bp AAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGATaGTTCCAAAACAGCATTACAGTTCTTCTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: KWEDMVSWDALG*FQNSITVLLWH
Trigger: ATGCCAAAGAAGAACTGTAATGCTGTTTTGGAATCATCCCAAGGCATCCCAAGACACCATATCTTCCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR GCA 72 bp TTATACAAACTGTATTCTAGAGAGGTGGGTTTTGGTTaGACAAAGAGGAGACCTTTTAAAGAGGCAGCACAT +
Preference number: 3 (lower is better)
Translates to: LYKLYSREVGFG*TKRRPFKEAAH
Trigger: ATGTGCTGCCTCTTTAAAAGGTCTCCTCTTTGTGCAACCAAAACCCACCTCTCTAGAATACAGTTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR-3UTR CAA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTACTGCTGAGATCATGTaGTTCAGCACCCATTCTAAT +
Preference number: 3 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVTAEIM*FSTHSN
Trigger: ATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR CCA 72 bp TATAGCTTCAGTTATACAAACTGTATTCTAGAGAGGTaGGTTTTGGTTGCACAAAGAGGAGACCTTTTAAAG +
Preference number: 3 (lower is better)
Translates to: YSFSYTNCILER*VLVAQRGDLLK
Trigger: CTTTAAAAGGTCTCCTCTTTGTGCAACCAAAACCCACCTCTCTAGAATACAGTTTGTATAACTGAAGCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR TCA 72 bp GAGAAAACATTCAGATTCTCAAAAATCCACACTCTGTaGGTTATTATTTGCTTTACCTACTCATGGTGGTTA +
Preference number: 3 (lower is better)
Translates to: EKTFRFSKIHTL*VIICFTYSWWL
Trigger: TAACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAGAATCTGAATGTTTTCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGAGGGAGCGGGAGGGCTaGCCACACTCTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQREREG*PHSGRQ
Trigger: CTGCCTTCCAGAGTGTGGTCAGCCCTCCCGCTCCCT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGGAGAGGACCACCTCCTaGCCGGGAGTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQERTTS*PGVCSV
Trigger: CACAGAGCAGACTCCCGGCCAGGAGGTGGTCCTCTC...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGTCCTGGCCGGGAGTCTaGTCTGTGTCTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQSWPGV*SVSVVS
Trigger: GGAGACCACAGACACAGAGCAGACTCCCGGCCAGGA...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGCTGGAGCAGCAGGTGTaGACGCCCATGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQLEQQV*TPMVSA
Trigger: AGCTGACACCATGGGCGTCCACACCTGCTGCTCCAG...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGAGCCCAGGTAGACGGTaGCATGCTCCTTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQSPGRR*HAPWRL
Trigger: CAGTCTCCAAGGAGCATGTCACCGTCTACCTGGGCT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGCAGGACACCAGGCCTTaGACCACCCAGCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQQDTRP*TTQRWL
Trigger: GAGCCAGCGCTGGGTGGTGCAAGGCCTGGTGTCCTG...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGCCTCTTGACCAGGCTTaGCAGGGAGCGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQPLDQA*QGAGGL
Trigger: CAGCCCTCCCGCTCCCTGCCAAGCCTGGTCAAGAGG...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGCTGGCAGGATTTGGGTaGCTTCTAATGTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQLAGFG*LLMCPP
Trigger: GGGTGGGCACATTAGAAGTCACCCAAATCCTGCCAG...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTACCACTATCAGGGCCTaGCACGGGAAGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSITTIRA*HGKRPG
Trigger: GCCTGGCCTCTTCCCGTGGCAGGCCCTGATAGTGGT...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGCCCCATATTCGGGCCTaGGCTTCAGGTAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQPHIRA*ASGSLS
Trigger: TGAAAGGCTACCTGAAGCCCAGGCCCGAATATGGGG...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGCCCCAGTCCTTTGAGTaGAGAGGTTGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQPQSFE*RGCHCT
Trigger: AGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGG...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGTCCTGCAGCCCTGTATaGGAGCCTCCAGCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: FSTHSNPHGKGHGGVVGGSCSPV*EPPAPV
Trigger: AACCGGGGCTGGAGGCTCTCATACAGGGCTGCAGGA...CCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGATACTGCAGGACATCTaGCAAGGTCCGTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQILQDI*QGPCAT
Trigger: AGTGGCACACGGACCTTGTCAGATGTCCTGCAGTAT...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGATTGGGTGCTCCCGGCTaGCCGGCCTTGGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PSLLWVVSLAENGTSVSRLGAPG*PALVLP
Trigger: TGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAA...TCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCATTGGGTGCTCCCGGCTaGCCGGCCTTGGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPLGAPG*PALVLP
Trigger: TGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAA...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTTTTTCCTGCCTTGGGTaGTCCCGGCTGCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVFSCLG*SRLPGL
Trigger: AAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAA...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCATTGGGATTGGAGATaGCCCAGCCGGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVHWDWR*PSRPPG
Trigger: GCCTGGTGGCCGGCTGGGGCATCTCCAATCCCAATG...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGGTCCCTGTGTGTCTCTaGAATTGGCTGGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQVPVCL*NWLAFS
Trigger: GGAGAATGCCAGCCAATTCCAGAGACACACAGGGAC...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR TCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTAGCTTGACTTGCCTGTaGGCTCGTGCCCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVSLTCL*ARARCG
Trigger: ACCACACCGGGCACGAGCTCACAGGCAAGTCAAGCT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGATCACCCCAGTCCTTTaGGTGAAGAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQITPVL*VKRLSL
Trigger: CAGTGACAACCTCTTCACTCAAAGGACTGGGGTGAT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTTCCTGCAGCCCTGTATaGGAGCCTCCAGCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLISCSPV*EPPAPV
Trigger: AACCGGGGCTGGAGGCTCTCATACAGGGCTGCAGGA...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTACACCACTCGGGCAGCTaGGCTGTTGACTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLHHSGS*AVDCPR
Trigger: TCGGGGGCAGTCAACAGCTCAGCTGCCCGAGTGGTG...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGATTGGGTGCTCCCGGCTaGCCGGCCTTGGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRLGAPG*PALVLP
Trigger: TGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAA...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGTTGGGTGCTCCCGGCTaGCCGGCCTTGGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVLGAPG*PALVLP
Trigger: TGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAA...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATATTTTCCTGCCTTGGGTaGTCCCGGCTGCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIFSCLG*SRLPGL
Trigger: AAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAA...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATTCCTGGCCGGGAGTCTaGTCTGTGTCTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYSWPGV*SVSVVS
Trigger: GGAGACCACAGACACAGAGCAGACTCCCGGCCAGGA...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTACCACTATCAGGGCCTaGCACGGGAAGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLITTIRA*HGKRPG
Trigger: GCCTGGCCTCTTCCCGTGGCAGGCCCTGATAGTGGT...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGCAAGGCACGTGTCTTTaGCGCCCTCGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQQGTCL*RPRSSQ
Trigger: CTGGCTACTACGAGGGCGGCAAAGACACGTGCCTTG...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGCTCATTTTCCTGCCTTaGGTGCTCCCGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVLIFLP*VLPAAR
Trigger: CCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAG...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCTCATTTTCCTGCCTTaGGTGCTCCCGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGLIFLP*VLPAAR
Trigger: CCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGAGAGGACCACCTCCTaGCCGGGAGTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVERTTS*PGVCSV
Trigger: CACAGAGCAGACTCCCGGCCAGGAGGTGGTCCTCTC...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGATGCTCCTTGGAGACTaGTATCACCGTGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQMLLGD*YHRGVS
Trigger: AGAGACACCACGGTGATACCAGTCTCCAAGGAGCAT...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGGTAAGAAGCATGGCCTaGAAAGGAGTGCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQVRSMA*KGVLGL
Trigger: CAATCCCAGCACTCCTTTCCAGGCCATGCTTCTTAC...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCTGGAGCAGCAGGTGTaGACGCCCATGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVLEQQV*TPMVSA
Trigger: AGCTGACACCATGGGCGTCCACACCTGCTGCTCCAG...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGCGGTCACGATCCAGCTaGAGCCTAGAAGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEERSRSS*SLEGSL
Trigger: GAGGCTCCCTTCTAGGCTCCAGCTGGATCGTGACCG...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGGAAGTCAGGGCTGGTaGTCACCCCAGTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVGSQGW*SPQSFE
Trigger: CTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTGAGAAACCCCAGGCATaGAGGTGCTCCAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIEKPQA*RCSKGS
Trigger: TGATCCCTTGGAGCACCTTCATGCCTGGGGTTTCTC...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGTCACGCCTTCCCCTaGCTGCAACAGATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVGHAFP*LQQIPS
Trigger: AGAGGGGATCTGTTGCAGGCAGGGGAAGGCGTGACC...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTTTTCCTGCCTTGGGTaGTCCCGGCTGCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFFSCLG*SRLPGL
Trigger: AAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAA...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCCTGCCACAGAAGGTTaGCAGCACCTGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVPATEG*QHLVLS
Trigger: ACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTTCCTGGCCGGGAGTCTaGTCTGTGTCTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLISWPGV*SVSVVS
Trigger: GGAGACCACAGACACAGAGCAGACTCCCGGCCAGGA...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGTCCTGGCCGGGAGTCTaGTCTGTGTCTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVSWPGV*SVSVVS
Trigger: GGAGACCACAGACACAGAGCAGACTCCCGGCCAGGA...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGTGTGCTGTCGGAAGTaGGGTGTAGCTTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVVCCRK*GVASLR
Trigger: CCTGAGCGAAGCTACACCGCACTTCCGACAGCACAC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCACCATGGCTCCTTCCTaGTGGGGTCCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTTMAPS*WGPSGR
Trigger: TCTGCCTGAGGGACCCCAGCAGGAAGGAGCCATGGT...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLPAARP*SSQLDL
Trigger: CAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGG...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAGAGAGGACCACCTCCTaGCCGGGAGTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGERTTS*PGVCSV
Trigger: CACAGAGCAGACTCCCGGCCAGGAGGTGGTCCTCTC...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAGAGAGGACCACCTCCTaGCCGGGAGTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLERTTS*PGVCSV
Trigger: CACAGAGCAGACTCCCGGCCAGGAGGTGGTCCTCTC...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTCCTGGAAAGGAGTGCTaGGATTGGCACAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIPGKEC*DWHRGL
Trigger: AAGGCCTCTGTGCCAATCCCAGCACTCCTTTCCAGG...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTAGGTGTGGACGCCCATaGTGTCAGCTGGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVRCGRP*CQLVFQ
Trigger: CTGGAACACCAGCTGACACCATGGGCGTCCACACCT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGTGCTTTGTGCTTGTCTaGAGCAGCAGGTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQCFVLV*SSRCGR
Trigger: GCGTCCACACCTGCTGCTCCAGACAAGCACAAAGCA...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTCCCCATATTCGGGCCTaGGCTTCAGGTAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIPHIRA*ASGSLS
Trigger: TGAAAGGCTACCTGAAGCCCAGGCCCGAATATGGGG...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTAGAACCCAGGACTCCTaGCTCTTTTCACTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIRTQDS*LFSLPA
Trigger: GGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGTCTCAGGGGCTTCTCTaGCTGCCTTGCTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQSQGLL*LPCSDG
Trigger: TCCATCAGAGCAAGGCAGCCAGAGAAGCCCCTGAGA...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGCTTCCGGGAGAACTTaGGGAGCCCACACACTGGAA +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEASGRT*GAHTLE
Trigger: TTCCAGTGTGTGGGCTCCCCAAGTTCTCCCGGAAGC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGCCGGTGTGGTGTCCGTaGTGCCTTATCTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQPVWCP*CLIFVL
Trigger: CAGAACAAAGATAAGGCATCACGGACACCACACCGG...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR TCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQLIGEI*PESDGH
Trigger: ATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAG...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCGGGCATCAAAGCCTGTaGAACGCTCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: VVSLAENGTSVSRLPRVLGHQSL*NAPHWR
Trigger: TCTCCAATGAGGAGCGTTTCACAGGCTTTGATGCCC...GAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTCCCCAGTCCTTTGAGTaGAGAGGTTGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIPQSFE*RGCHCT
Trigger: AGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGG...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTGGAAGTCAGGGCTGGTaGTCACCCCAGTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIGSQGW*SPQSFE
Trigger: CTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCC...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGCACCACTCGGGCAGCTaGGCTGTTGACTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKHHSGS*AVDCPR
Trigger: TCGGGGGCAGTCAACAGCTCAGCTGCCCGAGTGGTG...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTAGAACATGTTCTCCGTaGCGCTGTAATTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIRTCSP*RCNCPS
Trigger: GCTCGGGCAATTACAGCGTCACGGAGAACATGTTCT...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGAGAACATGTTCTCCGTaGCGCTGTAATTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQRTCSP*RCNCPS
Trigger: GCTCGGGCAATTACAGCGTCACGGAGAACATGTTCT...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTACTGCCTGCCATGGGTaGGCCTCTGATTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVTACHG*ASDSFD
Trigger: GTCAAAGGAATCAGAGGCTCACCCATGGCAGGCAGT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCAGTTCCTCACTCCGGTaGCCCTCTGGATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTSSSLR*PSGSSP
Trigger: AGGACTGGATCCAGAGGGTCACCGGAGTGAGGAACT...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATACCTGCCACAGAAGGTTaGCAGCACCTGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIPATEG*QHLVLS
Trigger: ACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGG...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCCCATTTCTGGATGTCTaGATTGTGTGGGGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: VVSLAENGTSVSRLPRVLPFLDV*IVWGPV
Trigger: GACGGGACCCCACACAATGCAGACATCCAGAAATGG...GAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAGCGCAGCACATGAGCTaGTGTGAGGATCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLAQHMS*CEDPGR
Trigger: GCGTCCTGGATCCTCACAGCAGCTCATGTGCTGCGC...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGGGAACACAGGTCTCCTaGCTGGAGCCTTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQGTQVS*LEPFPY
Trigger: ATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCC...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGTTTCTTCCATTTTCCTaGCCAAAAGCACAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQFLPFS*PKAQQD
Trigger: GTCCTGCTGTGCTTTTGGGCAGGAAAATGGAAGAAA...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGAGGGGCTTCTCTGGCTaGCTTGCTCTGATGGAGATT +
Preference number: 4 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQRGFSG*LALMEI
Trigger: AATCTCCATCAGAGCAAGGCAGCCAGAGAAGCCCCT...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCCAATCCAGGGAGTGGTaGCTTTCTGGGCTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCQSREW*LSGLGV
Trigger: GACGCCCAGCCCAGAAAGGCACCACTCCCTGGATTG...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGCACCCCAGGACACAGTaGCCACCAGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRHPRTQ*PPGTTG
Trigger: GCCAGTGGTACCTGGTGGGCACTGTGTCCTGGGGTG...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGGAGCTGGGTCCCATTaGCACCTTCCCCTTACAGAA +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEGAGSH*HLPLTE
Trigger: TTCTGTAAGGGGAAGGTGGCAATGGGACCCAGCTCC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp ACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCGCCCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: TCKPQKTEPLMMTFQPCAPAARP*SSQLDL
Trigger: CAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGG...GGCGCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGCTCATTTTCCTGCCTTaGGTGCTCCCGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVLIFLP*VLPAAR
Trigger: CCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAG...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGCCTCCTCCAGCTCGATaGTATACAGGCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGPPPAR*YTGIQS
Trigger: GCTCTGAATGCCTGTATACCATCGAGCTGGAGGAGG...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTGGCTCGATTTTCCCATaGACAGGAGGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIGSIFP*TGGCSS
Trigger: AGAGCTACAGCCTCCTGTCCATGGGAAAATCGAGCC...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTATGTTGAAGTCTGGGTaGAGCACCACTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVMLKSG*STTRAA
Trigger: AGCTGCCCGAGTGGTGCTCCACCCAGACTTCAACAT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTCACAGGTCTCCTGCCTaGAGCCTTTTCCCTATACCA +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIHRSPA*SLFPIP
Trigger: TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTG...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGCCGGTGTGGTGTCCGTaGTGCCTTATCTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FSTHSNPHGKGHGGVVGGPVWCP*CLIFVL
Trigger: CAGAACAAAGATAAGGCATCACGGACACCACACCGG...CCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGACCCATCTGGGACAGTaGTATTCCAAGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGTHLGQ*YSKSPL
Trigger: CAGAGGTGACTTGGAATATCACTGTCCCAGATGGGT...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGTCCTGCAGCCCTGTATaGGAGCCTCCAGCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKSCSPV*EPPAPV
Trigger: AACCGGGGCTGGAGGCTCTCATACAGGGCTGCAGGA...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGGGGCTGGGCGTCCATTaGAGATCCTGGCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRGLGVH*RSWPSA
Trigger: AGCTGATGGCCAGGATCTTCAATGGACGCCCAGCCC...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAGCCACCTCATTTTCCTaGCTTGGGTGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRATSFS*LGCSRL
Trigger: CAGCCGGGAGCACCCAAGGCAGGAAAATGAGGTGGC...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR GCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVCLWSP*HRRLPA
Trigger: TGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACA...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCATAGACCTGCTTGCTaGCGCATTCTTCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGHRPAC*RILQVP
Trigger: GGGGACCTGAAGAATGCGGCAGCAAGCAGGTCTATG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCATGGCCTGGAAAGGAGTaGTGGGATTGGCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPWPGKE*WDWHRG
Trigger: GCCTCTGTGCCAATCCCAGCACTCCTTTCCAGGCCA...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCTCCCACGGCTATTCTaGTCCCAGCAGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGLPRLF*SQQSAQ
Trigger: TTGTGCTGACTGCTGGGAGCAGAATAGCCGTGGGAG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCACCTGGCTCTTTTCACTaGCTGCCATGGGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPPGSFH*LPWVSL
Trigger: GAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGG...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCACTGCAGGGGACCTTATaGCAGCCTGTTGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPLQGTL*QPVADG
Trigger: TCCGTCAGCAACAGGCTGGCATAAGGTCCCCTGCAG...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTAGGGGCTTCTCTGGCTaGCTTGCTCTGATGGAGATT +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVRGFSG*LALMEI
Trigger: AATCTCCATCAGAGCAAGGCAGCCAGAGAAGCCCCT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGCTGGTGGAGGCAGTGTaGGGCGGTCACGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKELVEAV*GGHDPA
Trigger: AGCTGGATCGTGACCGCCGCACACTGCCTCCACCAG...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGCTTTGGCTCACACTTTaGCTGTCCCATGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEELWLTL*LSHVLG
Trigger: CCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAG...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCCCAGGGCCCACCTCATaGAGCCCAGTTTCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTAPGPTS*SPVSQE
Trigger: TTCTTGGGAAACTGGGCTGCATGAGGTGGGCCCTGG...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGGAGTCGGGGAACGGCTaGTTGGGGTCAGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKESGNG*LGSAVD
Trigger: GTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGACCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRPAARP*SSQLDL
Trigger: CAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGG...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWPAARP*SSQLDL
Trigger: CAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGG...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGTTTAGCTCCACGGTGTaGGCTGAAGCCTTTGACAGG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEFSSTV*AEAFDR
Trigger: CCTGTCAAAGGCTTCAGCCCACACCGTGGAGCTAAA...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGGGCATTCAGAGCTCTTaGGGTAAGGGTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGGIQSS*GKGLGS
Trigger: ACTTCCCAAACCCTTACCCCAAGAGCTCTGAATGCC...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGCCTCCTCCAGCTCGATaGTATACAGGCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEPPPAR*YTGIQS
Trigger: GCTCTGAATGCCTGTATACCATCGAGCTGGAGGAGG...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGGTGCTGATGGGTTCTaGGGCTTTCTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEGADGF*GFLSTE
Trigger: TTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTRTLWL*VLMGSG
Trigger: CCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCT...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTCCCGAGTTGTCACTATaGAACAGGATCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: LGGVSSREWHLSLQTAQGPELSL*NRIRTL
Trigger: CAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGG...ACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCATGTTGAAGTCTGGGTaGAGCACCACTCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGMLKSG*STTRAA
Trigger: AGCTGCCCGAGTGGTGCTCCACCCAGACTTCAACAT...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGGATGGGTTTGATAAGTaGTCAGGAGTGAATAAAGGC +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQDGFDK*SGVNKG
Trigger: GCCTTTATTCACTCCTGACCACTTATCAAACCCATC...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCAGGTGTGGACGCCCATaGTGTCAGCTGGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFRCGRP*CQLVFQ
Trigger: CTGGAACACCAGCTGACACCATGGGCGTCCACACCT...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCAGAACATCCTGCGGGGTaGATTCTCCGCCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPEHPAG*ILRPAH
Trigger: ATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTC...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATACACTGGAAGGCAGGTaGGTAGGCTTCTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYTLEGR*VGFSPI
Trigger: TATTGGGGAGAAGCCTACCCACCTGCCTTCCAGTGT...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAGGAGTGGTGCCTTTCTaGGCTGGGCGTCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGGVVPF*AGRPLK
Trigger: CTTCAATGGACGCCCAGCCCAGAAAGGCACCACTCC...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGTCCGGATCGAGTGACTaGTGGAGGCAGTGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLSGSSD*WRQCAA
Trigger: CGCCGCACACTGCCTCCACCAGTCACTCGATCCGGA...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGATGGCTCCTTCCTGCTaGGGTCCCTCAGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRMAPSC*GPSGRQ
Trigger: CTGTCTGCCTGAGGGACCCCAGCAGGAAGGAGCCAT...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGCCCACCAGGTACCACTaGCCTCTTTCTCTATTCAGG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEPTRYH*PLSLFR
Trigger: CCTGAATAGAGAAAGAGGCCAGTGGTACCTGGTGGG...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATAAGGGCAGATGGAGATaGTCAAGGTTGAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYKGRWR*SRLRGE
Trigger: CTCTCCCCTCAACCTTGACCATCTCCATCTGCCCTT...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGATTCCAAGTCACCTCTaGATCACTGGGATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGIPSHL*ITGIGV
Trigger: GACTCCTATCCCAGTGATTCAGAGGTGACTTGGAAT...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGACCCATCTGGGACAGTaGTATTCCAAGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEETHLGQ*YSKSPL
Trigger: CAGAGGTGACTTGGAATATCACTGTCCCAGATGGGT...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGCCCCAGTCCTTTGAGTaGAGAGGTTGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVPQSFE*RGCHCT
Trigger: AGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGG...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACTCCTGCAGCCCTGTATaGGAGCCTCCAGCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHSCSPV*EPPAPV
Trigger: AACCGGGGCTGGAGGCTCTCATACAGGGCTGCAGGA...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp TTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGTCACTTGCTCTGACTTaGGTTCGCTCTCCAGATCGA +
Preference number: 4 (lower is better)
Translates to: FSTHSNPHGKGHGGVVGGSLALT*VRSPDR
Trigger: TCGATCTGGAGAGCGAACTCAAGTCAGAGCAAGTGA...CCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTTCAAGTCATCAAAGATaGCAAAGGCCCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSISSHQR*QRPHRY
Trigger: ATAGCGGTGGGGCCTTTGTCATCTTTGATGACTTGA...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGAGGAGTGGGTCCCTCTaGACATCCTGCGGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKRSGSL*TSCGVD
Trigger: ATCCACCCCGCAGGATGTTCAGAGGGACCCACTCCT...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATGATGAGGGTGAAGATTaGTGTTGGGCAAGTTGCACG +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYDEGED*CWASCT
Trigger: CGTGCAACTTGCCCAACATCAATCTTCACCCTCATC...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCTCTCTAGAAGCTTCCTaGGAGAGGATGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTSLEAS*ERMGEA
Trigger: TGCCTCTCCCATCCTCTCTCAGGAAGCTTCTAGAGA...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGGAACTTGGAGCTTCTaGTCCCTTGGAGGGCTTATA +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEGTWSF*SLGGLI
Trigger: TATAAGCCCTCCAAGGGATCAGAAGCTCCAAGTTCC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACACGCCTTCCCCTGCCTaGAACAGATCCCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHTPSPA*NRSPLP
Trigger: GGGGAGAGGGGATCTGTTGCAGGCAGGGGAAGGCGT...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACTTTTCCTGCCTTGGGTaGTCCCGGCTGCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHFSCLG*SRLPGL
Trigger: AAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAA...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFCLWSP*HRRLPA
Trigger: TGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACA...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATCAGGACACCAGGCCTTaGACCACCCAGCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHQDTRP*TTQRWL
Trigger: GAGCCAGCGCTGGGTGGTGCAAGGCCTGGTGTCCTG...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCTCCATAGACCTGCTTaGTGCCGCATTCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGLHRPA*CRILQV
Trigger: GACCTGAAGAATGCGGCAGCAAGCAGGTCTATGGAG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGCCCTATACCACACTCTaGCTCTCAGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKPYTTL*LSGSWG
Trigger: CCCCCAGGACCCTGAGAGGCAGAGTGTGGTATAGGG...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTGGAACACAGGTCTCCTaGCTGGAGCCTTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIGTQVS*LEPFPY
Trigger: ATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCC...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGACCTGGCTCTTTTCACTaGCTGCCATGGGTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRPGSFH*LPWVSL
Trigger: GAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGG...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCGTCTCTGGAATTGGCTaGCATTCTCCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VVSLAENGTSVSRLPRVLVSGIG*HSPFRS
Trigger: TGACCTGAATGGAGAATGCCAGCCAATTCCAGAGAC...GAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGGTCTCTGGAATTGGCTaGCATTCTCCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGVSGIG*HSPFRS
Trigger: TGACCTGAATGGAGAATGCCAGCCAATTCCAGAGAC...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGTCCCTGTGTGTCTCTaGAATTGGCTGGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVVPVCL*NWLAFS
Trigger: GGAGAATGCCAGCCAATTCCAGAGACACACAGGGAC...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPAARP*SSQLDL
Trigger: CAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGCCAGGCGACTGGATCTaGCCAAACATATTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGPGDWI*PNILFS
Trigger: GCTAAACAATATGTTTGGCCAGATCCAGTCGCCTGG...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp TTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGACTGGGATAGGAGTCTaGATAACCAGGCGACTGGAT +
Preference number: 4 (lower is better)
Translates to: FSTHSNPHGKGHGGVVGGTGIGV*ITRRLD
Trigger: ATCCAGTCGCCTGGTTATCCAGACTCCTATCCCAGT...CCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCCTCCTCCAGCTCGATaGTATACAGGCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QPISSLGGVSSREWHLSLPPPAR*YTGIQS
Trigger: GCTCTGAATGCCTGTATACCATCGAGCTGGAGGAGG...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTGGTGCTGATGGGTTCTaGGGCTTTCTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIGADGF*GFLSTE
Trigger: TTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACC...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRRTLWL*VLMGSG
Trigger: CCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCT...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVRTLWL*VLMGSG
Trigger: CCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCT...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAAGGATCAGGACACTGTaGCTCTGGGTGCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLRIRTL*LWVLMG
Trigger: ACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCT...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCGGCTCGATTTTCCCATaGACAGGAGGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: QPISSLGGVSSREWHLSLGSIFP*TGGCSS
Trigger: AGAGCTACAGCCTCCTGTCCATGGGAAAATCGAGCC...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCGTCTCTAGCCGAGAATaGCACCTCAGTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: QPISSLGGVSSREWHLSLVSSRE*HLSLQT
Trigger: AGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGAC...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGTTCATCCAGACTCCTTaGGCAGAACAGGTATATATA +
Preference number: 4 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQFIQTP*AEQVYI
Trigger: TATATATACCTGTTCTGCCCAAGGAGTCTGGATGAA...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCACTCTGGAAGGCAGGTaGGTAGGCTTCTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGTLEGR*VGFSPI
Trigger: TATTGGGGAGAAGCCTACCCACCTGCCTTCCAGAGT...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTTGACCAGGCTTaGCAGGGAGCGGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPLDQA*QGAGGL
Trigger: CAGCCCTCCCGCTCCCTGCCAAGCCTGGTCAAGAGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTATGCTCCTTGGAGACTaGTATCACCGTGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVMLLGD*YHRGVS
Trigger: AGAGACACCACGGTGATACCAGTCTCCAAGGAGCAT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGTGAATAAAGGCCACTaGGGTAAGAAGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVVNKGH*GKKHGL
Trigger: CAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCAC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTCAGCAGGACACAGTGTaGGTCTTTTCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGAVSVGEATARSVCSIQQDTV*VFSFSR
Trigger: CCTGGAAAAAGAAAAGACCCACACTGTGTCCTGCTG...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCAGAACCCAGGACTCCTaGCTCTTTTCACTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFRTQDS*LFSLPA
Trigger: GGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCGGATCATACTGGGGGTaGAGAGTGGTGTGTTTGACG +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTGSYWG*RVVCLT
Trigger: CGTCAAACACACCACTCTCCACCCCCAGTATGATCC...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCCCTCAGGCAGACAGATaGGCATCACGAAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTPQADR*ASRRHS
Trigger: TGAATGCCTTCGTGATGCCCATCTGTCTGCCTGAGG...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGACCTCCGTCTTACCTGTaGACAAGGCTCTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGPPSYL*TRLWSS
Trigger: ACTGGACCAGAGCCTTGTCCACAGGTAAGACGGAGG...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGAGATCTGGGTTTCTTaGACCTTAGCAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEEIWVS*TLAAVQ
Trigger: CTGCACTGCTGCTAAGGTCCAAGAAACCCAGATCTC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCAGCCCTCTGCTTCTATaGCTCTGTGAGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTSPLLL*LCERSG
Trigger: CCCAGATCTCTCACAGAGCCATAGAAGCAGAGGGCT...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATATTCCAAGTCACCTCTaGATCACTGGGATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYIPSHL*ITGIGV
Trigger: GACTCCTATCCCAGTGATTCAGAGGTGACTTGGAAT...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCAGGGCATCAAAGCCTGTaGAACGCTCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPGHQSL*NAPHWR
Trigger: TCTCCAATGAGGAGCGTTTCACAGGCTTTGATGCCC...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGGGAAGTCAGGGCTGGTaGTCACCCCAGTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKGSQGW*SPQSFE
Trigger: CTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCC...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGCTGCCCATTCAGGTGTaGCAGCATGGCAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKLPIQV*QHGNPG
Trigger: CCCTGGATTGCCATGCTGTCACACCTGAATGGGCAG...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCGAGGACCCTTTGAGATaGGGGAGGAGGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTAEDPLR*GRRTCI
Trigger: TATGCAAGTCCTCCTCCCTCATCTCAAAGGGTCCTC...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGGTGAGGCTCAGGGGTaGGGAGTCGGGGAACGGCTG +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTGEAQG*GVGERL
Trigger: CAGCCGTTCCCCGACTCCTCACCCCTGAGCCTCACC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAAGCTTGACAAGTGTCTaGTGGAGCTGGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGSLTSV*WSWVPL
Trigger: CAATGGGACCCAGCTCCATCAGACACTTGTCAAGCT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATGAGTTTCTGCTAGCTTaGCAAGTGTCTGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYEFLLA*QVSDGA
Trigger: AGCTCCATCAGACACTTGTCAAGCTAGCAGAAACTC...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATATCTGGGAAGCCTTCTTaGTTGATATCTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSISGKPS*LISPPP
Trigger: TGGGGGAGGAGATATCAATCAAGAAGGCTTCCCAGA...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACTTGGGTGCTCCCGGCTaGCCGGCCTTGGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDLGAPG*PALVLP
Trigger: TGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAA...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCTTTTCCTGCCTTGGGTaGTCCCGGCTGCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCFSCLG*SRLPGL
Trigger: AAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAA...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGCCACCTCATTTTCCTaGCTTGGGTGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHATSFS*LGCSRL
Trigger: CAGCCGGGAGCACCCAAGGCAGGAAAATGAGGTGGC...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCCTCCATAGACCTGCTTaGTGCCGCATTCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFLHRPA*CRILQV
Trigger: GACCTGAAGAATGCGGCAGCAAGCAGGTCTATGGAG...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGTGTGGTAAGCCCATCTaGTCCCACACCCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKCGKPI*SHTQST
Trigger: CGTGGACTGGGTGTGGGAGCAGATGGGCTTACCACA...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTCTCCCAAAACCTGAATaGTCTTCTCCTAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVLPKPE*SSPRGR
Trigger: CCTTCCTCTAGGAGAAGAGCATTCAGGTTTTGGGAG...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGACTCCCACGGCTATTCTaGTCCCAGCAGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRLPRLF*SQQSAQ
Trigger: TTGTGCTGACTGCTGGGAGCAGAATAGCCGTGGGAG...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGAGATACCTGCTCTATTaGCCAGTAATGGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEERYLLY*PVMDRP
Trigger: CGGCCTATCCATTACTGGGCAATAGAGCAGGTATCT...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGTCTCTGGAATTGGCTaGCATTCTCCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVVSGIG*HSPFRS
Trigger: TGACCTGAATGGAGAATGCCAGCCAATTCCAGAGAC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR CCA 90 bp CCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGAGTCCCTGTGTGTCTCTaGAATTGGCTGGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PSLLWVVSLAENGTSVSRVPVCL*NWLAFS
Trigger: GGAGAATGCCAGCCAATTCCAGAGACACACAGGGAC...TCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCCCTCCTCCAGCTCGATaGTATACAGGCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTPPPAR*YTGIQS
Trigger: GCTCTGAATGCCTGTATACCATCGAGCTGGAGGAGG...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCCCGAGTTGTCACTATaGAACAGGATCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGPELSL*NRIRTL
Trigger: CAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGCCCGAGTTGTCACTATaGAACAGGATCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVPELSL*NRIRTL
Trigger: CAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGG...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCGGCTCGATTTTCCCATaGACAGGAGGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFGSIFP*TGGCSS
Trigger: AGAGCTACAGCCTCCTGTCCATGGGAAAATCGAGCC...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAAGACTGGTATCACCGTaGTGTCTCTACGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRRLVSP*CLYAGS
Trigger: GCTCCCAGCGTAGAGACACCACGGTGATACCAGTCT...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCTGCACCACCCAGCGCTaGCTCAAGTCATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTCTTQR*LKSSKM
Trigger: CATCTTTGATGACTTGAGCCAGCGCTGGGTGGTGCA...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCCCAGTCCACGTAATTaGAGACCTTTGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVPSPRN*RPLCRL
Trigger: GAGTCTACACAAAGGTCTCCAATTACGTGGACTGGG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCCACAGGTCTCCTGCCTaGAGCCTTTTCCCTATACCA +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFHRSPA*SLFPIP
Trigger: TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTG...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTAGCCGGTTGAGAAAGTaGACACTTCCCAATCATTCC +
Preference number: 4 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVSRLRK*TLPNHS
Trigger: GGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGTGGCAATCCAGGGAGTaGTGCCTTTCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWWQSRE*CLSGLG
Trigger: GCCCAGCCCAGAAAGGCACCACTCCCTGGATTGCCA...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAGTGTTGGGATCATACTaGGGGTGGAGAGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGVLGSY*GWRVVC
Trigger: ACACACCACTCTCCACCCCCAGTATGATCCCAACAC...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGTATTCAGGGTCACCATaGGGCCTCCAGAGTCACCCG +
Preference number: 4 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLYSGSP*GLQSHP
Trigger: CGGGTGACTCTGGAGGCCCCATGGTGACCCTGAATA...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGACGTAGTGGAAAGGGGTaGGTATTTCAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGRSGKG*VFQEQQ
Trigger: CTGCTGCTCCTGAAATACCCACCCCTTTCCACTACG...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp TGGGAGAGGCATTTTGCTTGGAAAACACTTATGGCCTaGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: WERHFAWKTLMA*QDEGVQGEAQG
Trigger: CCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTGTTTTCCAAGCAAAATGCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVLIGEI*PESDGH
Trigger: ATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYLIGEI*PESDGH
Trigger: ATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAG...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGCCCCAGTCCTTTGAGTaGAGAGGTTGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRPQSFE*RGCHCT
Trigger: AGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGG...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCCGAGCACTTGGTCTTTaGAGAAATACTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTRALGL*RNTWLG
Trigger: CCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCG...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGCAGGGGTCTTGGGAGTaGTCCATTTCTGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLQGSWE*SISGCL
Trigger: CAGACATCCAGAAATGGATCACTCCCAAGACCCCTG...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGAGCAGCTTCAACTGCTaGGATCATGTTGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVSSFNC*DHVVQH
Trigger: GTGCTGAACAACATGATCTCAGCAGTTGAAGCTGCT...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGAGGGAGCGGGAGGGCTaGCCACACTCTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLREREG*PHSGRQ
Trigger: CTGCCTTCCAGAGTGTGGTCAGCCCTCCCGCTCCCT...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAAGCCCAGGTAGACGGTaGCATGCTCCTTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRSPGRR*HAPWRL
Trigger: CAGTCTCCAAGGAGCATGTCACCGTCTACCTGGGCT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCGGGCAGCTGAGCTGTTaGCTGCCCCCGATTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFGQLSC*LPPICL
Trigger: GAGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCC...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATAGGAGTGGGTCCCTCTaGACATCCTGCGGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHRSGSL*TSCGVD
Trigger: ATCCACCCCGCAGGATGTTCAGAGGGACCCACTCCT...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCCTGTTCATTTTCATCTaGCCGGAGCCTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTLFIFI*PEPPML
Trigger: AAGCATTGGAGGCTCCGGTCAGATGAAAATGAACAG...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGGGTCACGCCTTCCCCTaGCTGCAACAGATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGGHAFP*LQQIPS
Trigger: AGAGGGGATCTGTTGCAGGCAGGGGAAGGCGTGACC...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACCCTGCCACAGAAGGTTaGCAGCACCTGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHPATEG*QHLVLS
Trigger: ACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGG...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKCLWSP*HRRLPA
Trigger: TGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACA...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGTCCTGGCCGGGAGTCTaGTCTGTGTCTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGSWPGV*SVSVVS
Trigger: GGAGACCACAGACACAGAGCAGACTCCCGGCCAGGA...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp GTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTTCTCAATATGTCCTCAAACTaGAGGTTGACCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: VVSLAENGTSVSRLPRVLNMSSN*RLTMKP
Trigger: GGGTTTCATGGTCAACCTGCAGTTTGAGGACATATT...GAGAACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGAATATGTCCTCAAACTaGAGGTTGACCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGNMSSN*RLTMKP
Trigger: GGGTTTCATGGTCAACCTGCAGTTTGAGGACATATT...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCCTATACCACACTCTaGCTCTCAGGGTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPYTTL*LSGSWG
Trigger: CCCCCAGGACCCTGAGAGGCAGAGTGTGGTATAGGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGAACCTTTGCAAGAACTaGTTCCCCCAGCCGCTGACG +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKENLCKN*FPQPLT
Trigger: CGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTT...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATTCACCTGCCCAGCACTaGAAACTAGTAAGTGATAGA +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYSPAQH*KLVSDR
Trigger: TCTATCACTTACTAGTTTGCAGTGCTGGGCAGGTGA...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATGAGGTGGGTTTTGGTTaGACAAAGAGGAGACCTTTT +
Preference number: 4 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYEVGFG*TKRRPF
Trigger: AAAAGGTCTCCTCTTTGTGCAACCAAAACCCACCTC...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGGCACCCTCATTTTCCTaGCTTGGGTGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGAPSFS*LGCSRL
Trigger: CAGCCGGGAGCACCCAAGGCAGGAAAATGAGGGTGC...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392470.6
CDS-3UTR CCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAACTGGGATAGGAGTCTaGATAACCAGGCGACTGGAT +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLTGIGV*ITRRLD
Trigger: ATCCAGTCGCCTGGTTATCCAGACTCCTATCCCAGT...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTTCACCTCTGAATCACTaGGATAGGAGTCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVSPLNH*DRSLDN
Trigger: GTTATCCAGACTCCTATCCCAGTGATTCAGAGGTGA...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGKVAST*SSVSTF
Trigger: GAAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGACCTCCTCCAGCTCGATaGTATACAGGCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRPPPAR*YTGIQS
Trigger: GCTCTGAATGCCTGTATACCATCGAGCTGGAGGAGG...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGCAGCTGACGAGCACTTaGTCTTTGAAGAAATACTTG +
Preference number: 4 (lower is better)
Translates to: SAPILIHMERGTGVLWVGQLTST*SLKKYL
Trigger: CAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTG...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGAGTGATCCATTTCTaGATGTCTGCATTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVGVIHF*MSALCG
Trigger: CCCACACAATGCAGACATCCAGAAATGGATCACTCC...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAGTGTTCCAGCTCTCCTaGGGCTCTACAGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLVFQLS*GSTVYN
Trigger: ATTGTAGACTGTAGAGCCCCAGGAGAGCTGGAACAC...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTAAACCACTTGTCATTTaGCACTCTCGAAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVKPLVI*HSRSVL
Trigger: GAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGCCTGGAAAGGAGTGCTaGGATTGGCACAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKPGKEC*DWHRGL
Trigger: AAGGCCTCTGTGCCAATCCCAGCACTCCTTTCCAGG...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCAGTGAATAAAGGCCACTaGGGTAAGAAGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPVNKGH*GKKHGL
Trigger: CAGGCCATGCTTCTTACCCCAGTGGCCTTTATTCAC...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCAAATTTAAGGGCTTGGTaGGCCTCCCACGGCTATTCT +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPNLRAW*ASHGYS
Trigger: AGAATAGCCGTGGGAGGCCCACCAAGCCCTTAAATT...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGGCCCATGGTGTCAGCTaGTGTTCCAGGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKAHGVS*CSRVAY
Trigger: ATATGCCACCCTGGAACACCAGCTGACACCATGGGC...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAGAACATCCTGCGGGGTaGATTCTCCGCCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYREHPAG*ILRPAH
Trigger: ATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTC...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGGGTGCCTTTCTGGGCTaGGCGTCCATTGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEGAFLG*ASIEDP
Trigger: AGGATCTTCAATGGACGCCCAGCCCAGAAAGGCACC...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATAGCATTTAAGGGCAGATaGAGATGGTCAAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIAFKGR*RWSRLR
Trigger: CCTCAACCTTGACCATCTCCATCTGCCCTTAAATGC...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAACCTGTCCCATGTCCTTaGGAACCCACCCGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEPVPCP*EPTRSG
Trigger: TCCACTACGGGTGGGTTCCCAAGGACATGGGACAGG...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCCTTCCTGAGAGAGGATaGGAGAGGCATTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCLPERG*ERHFAW
Trigger: CCAAGCAAAATGCCTCTCCCATCCTCTCTCAGGAAG...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGAGGCAGTGCTTGAAATaGGAAGATATGGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEERQCLK*EDMVSW
Trigger: CCAAGACACCATATCTTCCCATTTCAAGCACTGCCT...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTACTCCTTTATCCTGTGTaGCTGACTTCAGCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLLLYPV*LTSALE
Trigger: CTCAAGGGCTGAAGTCAGCCACACAGGATAAAGGAG...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR CCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLKVAST*SSVSTS
Trigger: TGAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTT...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR TCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGAGCTTGACTTGCCTGTaGGCTCGTGCCCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKSLTCL*ARARCG
Trigger: ACCACACCGGGCACGAGCTCACAGGCAAGTCAAGCT...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAATTCCAAGTCACCTCTaGATCACTGGGATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLIPSHL*ITGIGV
Trigger: GACTCCTATCCCAGTGATTCAGAGGTGACTTGGAAT...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR TCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGACCCATCTGGGACAGTaGTATTCCAAGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLTHLGQ*YSKSPL
Trigger: CAGAGGTGACTTGGAATATCACTGTCCCAGATGGGT...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAACCCATCTGGGACAGTaGTATTCCAAGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRTHLGQ*YSKSPL
Trigger: CAGAGGTGACTTGGAATATCACTGTCCCAGATGGGT...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR TCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGATCACCCCAGTCCTTTaGGTGAAGAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVITPVL*VKRLSL
Trigger: CAGTGACAACCTCTTCACTCAAAGGACTGGGGTGAT...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCACGAGCACTTGGTCTTTaGAGAAATACTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPRALGL*RNTWLG
Trigger: CCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCG...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTCACTTGCTCTGACTTaGGTTCGCTCTCCAGATCGA +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVSLALT*VRSPDR
Trigger: TCGATCTGGAGAGCGAACTCAAGTCAGAGCAAGTGA...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGGCCCAAATGTGTTCTaGGTTGACAATGGGAATTTA +
Preference number: 4 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVGPNVF*VDNGNL
Trigger: TAAATTCCCATTGTCAACTCAGAACACATTTGGGCC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAACTGCCTGCCATGGGTaGGCCTCTGATTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRTACHG*ASDSFD
Trigger: GTCAAAGGAATCAGAGGCTCACCCATGGCAGGCAGT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGACAGTCAGGGAAGCTCTaGGTGCTCCAGCTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRQSGKL*VLQLEG
Trigger: TCCTTCTAGCTGGAGCACTCAGAGCTTCCCTGACTG...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGAATCAGCCTTGTGGGTaGACAGGAGGAGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVNQPCG*TGGESH
Trigger: ATGTGACTCTCCTCCTGTTCACCCACAAGGCTGATT...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392470.6
CDS-3UTR GCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCCCTGCCACAGAAGGTTaGCAGCACCTGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCPATEG*QHLVLS
Trigger: ACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGG...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTGCCACAGAAGGTTaGCAGCACCTGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPATEG*QHLVLS
Trigger: ACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGAATATGTCCTCAAACTaGAGGTTGACCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEENMSSN*RLTMKP
Trigger: GGGTTTCATGGTCAACCTGCAGTTTGAGGACATATT...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGATTCACTCTGTCACTTaGTCTGACTTGAGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVIHSVT*SDLSSL
Trigger: GAGCGAACTCAAGTCAGAGCAAGTGACAGAGTGAAT...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCTGTGGTAAGCCCATCTaGTCCCACACCCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFCGKPI*SHTQST
Trigger: CGTGGACTGGGTGTGGGAGCAGATGGGCTTACCACA...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCCTTGGTTGAGCTCCTaGATTGTATTACTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGPWLSS*IVLLGR
Trigger: TCTACCGAGTAATACAATGCAGGAGCTCAACCAAGG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGGTCTCTGGGAACCTTTaGAAGAACTGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEVSGNL*KNCFPQ
Trigger: CTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGAC...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGAAGCCTTCTGGCAGGTaGTGTGGTCAACAATCGGGA +
Preference number: 4 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLKPSGR*CGQQSG
Trigger: TCCCGATTGTTGACCACAGCACCTGCCAGAAGGCTT...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCAGAGATGAAGTCACCTaGCCAGCACTGCAAACTAGT +
Preference number: 4 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCRDEVT*PALQTS
Trigger: ACTAGTTTGCAGTGCTGGGCAGGTGACTTCATCTCT...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATAAAACACTTATGGCCTTaGAAGATGAGGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSIKHLWP*KMREFR
Trigger: CCTGAACTCCCTCATCTTGCAAGGCCATAAGTGTTT...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGTTTAGCTCCACGGTGTaGGCTGAAGCCTTTGACAGG +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKFSSTV*AEAFDR
Trigger: CCTGTCAAAGGCTTCAGCCCACACCGTGGAGCTAAA...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CCA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCGATCCGAAACCCATCTaGGACAGTGATATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QPISSLGGVSSREWHLSLDPKPI*DSDIPS
Trigger: ACTTGGAATATCACTGTCCCAGATGGGTTTCGGATC...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGATCCGAAACCCATCTaGGACAGTGATATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVDPKPI*DSDIPS
Trigger: ACTTGGAATATCACTGTCCCAGATGGGTTTCGGATC...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp ACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCGCCGGTGCTGATGGGTTCTaGGGCTTTCTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: TCKPQKTEPLMMTFQPCAGADGF*GFLSTE
Trigger: TTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACC...GGCGCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCRTLWL*VLMGSG
Trigger: CCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCT...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFRTLWL*VLMGSG
Trigger: CCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCT...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGCCCGAGTTGTCACTATaGAACAGGATCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRPELSL*NRIRTL
Trigger: CAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGG...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGCAGCTGACGAGCACTTaGTCTTTGAAGAAATACTTG +
Preference number: 4 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEQLTST*SLKKYL
Trigger: CAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTG...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGCAAACCCTCAAGTaGAGAATTTGCTTTCACACA +
Preference number: 4 (lower is better)
Translates to: CSAPILIHMERGTGVLWVGQTLK*RICFHT
Trigger: TGTGTGAAAGCAAATTCTCCACTTGAGGGTTTGCCC...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAGTGTTCCAGCTCTCCTaGGGCTCTACAGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRVFQLS*GSTVYN
Trigger: ATTGTAGACTGTAGAGCCCCAGGAGAGCTGGAACAC...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGACTCTGGAAGGCAGGTaGGTAGGCTTCTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKTLEGR*VGFSPI
Trigger: TATTGGGGAGAAGCCTACCCACCTGCCTTCCAGAGT...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGATTGGATGTTGAAGTCTaGGTGGAGCACCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRLDVEV*VEHHSG
Trigger: GCCCGAGTGGTGCTCCACCCAGACTTCAACATCCAA...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGGATCGAGTGACTGGTaGAGGCAGTGTGCGGCGGTC +
Preference number: 4 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDGSSDW*RQCAAV
Trigger: GACCGCCGCACACTGCCTCCACCAGTCACTCGATCC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAACTCCGGTGACCCTCTaGATCCAGTCCTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: DPLEGLYLGALEGIKSLETPVTL*IQSLLW
Trigger: CCACAACAAGGACTGGATCCAGAGGGTCACCGGAGT...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCGAAGGAAAGGAGAAATaGCTGCTTTCATCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTEGKEK*LLSSED
Trigger: ATCCTCCGATGAAAGCAGCCATTTCTCCTTTCCTTC...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATACTTGGAAAACACTTATaGCCTTGCAAGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSILGKHL*PCKMRE
Trigger: CTCCCTCATCTTGCAAGGCCATAAGTGTTTTCCAAG...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp CTGACACTTGTCTTTAGTAGCCAGCCCATCTCTTCTTaGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LTLVFSSQPISS*GGVSSREWHLS
Trigger: ACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTGGCTACTAAAGACAAGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGCATCAAAGCCTGTaGAACGCTCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHGHQSL*NAPHWR
Trigger: TCTCCAATGAGGAGCGTTTCACAGGCTTTGATGCCC...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGATCACCCCAGTCCTTTaGGTGAAGAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKITPVL*VKRLSL
Trigger: CAGTGACAACCTCTTCACTCAAAGGACTGGGGTGAT...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAGGAAGTCAGGGCTGGTaGTCACCCCAGTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEGSQGW*SPQSFE
Trigger: CTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCC...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAATCCTGCAGCCCTGTATaGGAGCCTCCAGCCCCGGTT +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKSCSPV*EPPAPV
Trigger: AACCGGGGCTGGAGGCTCTCATACAGGGCTGCAGGA...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGACGAGCACTTGGTCTTTaGAGAAATACTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRRALGL*RNTWLG
Trigger: CCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCG...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTTGATCTGGTCAGCCTaGGGCCACATGGTTGTATAT +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLLIWSA*GHMVVY
Trigger: ATATACAACCATGTGGCCTCAGGCTGACCAGATCAA...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGATGTAGTTTTGGATGTTaGAGTCTGGGTGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRCSFGC*SLGGAP
Trigger: TGGTGCTCCACCCAGACTTCAACATCCAAAACTACA...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCAGTCAGGGAAGCTCTaGGTGCTCCAGCTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFQSGKL*VLQLEG
Trigger: TCCTTCTAGCTGGAGCACTCAGAGCTTCCCTGACTG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGTGCCCAGGCAGTGCTTaGAATGGGAAGATATGGTGT +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKECPGSA*NGKIWC
Trigger: ACACCATATCTTCCCATTTCAAGCACTGCCTGGGCA...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGGCTTCTATGGCTCTGTaGGAGATCTGGGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEASMAL*EIWVSW
Trigger: CCAAGAAACCCAGATCTCTCACAGAGCCATAGAAGC...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGCCACCTCATTTTCCTaGCTTGGGTGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDATSFS*LGCSRL
Trigger: CAGCCGGGAGCACCCAAGGCAGGAAAATGAGGTGGC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTACCTTGGTTGAGCTCCTaGATTGTATTACTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLPWLSS*IVLLGR
Trigger: TCTACCGAGTAATACAATGCAGGAGCTCAACCAAGG...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCATTTCTTCCATTTTCCTaGCCAAAAGCACAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPFLPFS*PKAQQD
Trigger: GTCCTGCTGTGCTTTTGGGCAGGAAAATGGAAGAAA...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACACCTCCGCAGAAGGGCTaGCCATTCAGGTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTPPQKG*PFRCDS
Trigger: GCTGTCACACCTGAATGGGCAGCCCTTCTGCGGAGG...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCCCAGAGCAGATGCTCTaGTTAGGAATAAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTAPEQML*LGIRKD
Trigger: ATCCTTCCTTATTCCTAAGCAGAGCATCTGCTCTGG...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGTGTGTCTCTGGAATTaGCTGGCATTCTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVVCLWN*LAFSIQ
Trigger: CTGAATGGAGAATGCCAGCCAATTCCAGAGACACAC...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACTCATTTTCCTGCCTTaGGTGCTCCCGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGLIFLP*VLPAAR
Trigger: CCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAG...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACTTTAGCTCCACGGTGTaGGCTGAAGCCTTTGACAGG +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHFSSTV*AEAFDR
Trigger: CCTGTCAAAGGCTTCAGCCCACACCGTGGAGCTAAA...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCGATCCGAAACCCATCTaGGACAGTGATATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFDPKPI*DSDIPS
Trigger: ACTTGGAATATCACTGTCCCAGATGGGTTTCGGATC...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGCCCGAGTTGTCACTATaGAACAGGATCAGGACACTG +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKPELSL*NRIRTL
Trigger: CAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGG...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGCTCGATTTTCCCATaGACAGGAGGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHGSIFP*TGGCSS
Trigger: AGAGCTACAGCCTCCTGTCCATGGGAAAATCGAGCC...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTCAGCTGACGAGCACTTaGTCTTTGAAGAAATACTTG +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIQLTST*SLKKYL
Trigger: CAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTG...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTTTCAGACACTCAATCTaGAATGTGTCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIFRHSI*NVSIST
Trigger: TGTGGAGATGGACACATTCCAGATTGAGTGTCTGAA...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGGGAGTGATCCATTTCTaGATGTCTGCATTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVGVIHF*MSALCG
Trigger: CCCACACAATGCAGACATCCAGAAATGGATCACTCC...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCTTGGATGTTGAAGTCTaGGTGGAGCACCACTCGGGC +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFLDVEV*VEHHSG
Trigger: GCCCGAGTGGTGCTCCACCCAGACTTCAACATCCAA...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGACCCAGTCCACGTAATTaGAGACCTTTGTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRPSPRN*RPLCRL
Trigger: GAGTCTACACAAAGGTCTCCAATTACGTGGACTGGG...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGGTAAGAAGCATGGCCTaGAAAGGAGTGCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKVRSMA*KGVLGL
Trigger: CAATCCCAGCACTCCTTTCCAGGCCATGCTTCTTAC...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGCATTCTCGAATGTGTTaGGATCATACTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRHSRMC*DHTGGG
Trigger: TCCACCCCCAGTATGATCCCAACACATTCGAGAATG...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGAAGAGTATAGGGGCCTaGGGTACAAACTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWKSIGA*GTNYQG
Trigger: GCCCTGGTAGTTTGTACCCCAGGCCCCTATACTCTT...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGTGTTCTCCCTCCATGTaGAAGGCCTCCTCCGTCTTA +
Preference number: 4 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWCSPSM*KASSVL
Trigger: TAAGACGGAGGAGGCCTTCCACATGGAGGGAGAACA...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp GAGCAGATGCTCTGCTTAGGAATAAGGAAGGATCCTTaGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: EQMLCLGIRKDP*AHTLPVPCPWE
Trigger: TTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCTTATTCCTAAGCAGAGCATCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVLIGEI*PESDGH
Trigger: ATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAG...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLLIGEI*PESDGH
Trigger: ATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAG...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCGGGCATCAAAGCCTGTaGAACGCTCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFGHQSL*NAPHWR
Trigger: TCTCCAATGAGGAGCGTTTCACAGGCTTTGATGCCC...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCCCCCAGTCCTTTGAGTaGAGAGGTTGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCPQSFE*RGCHCT
Trigger: AGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGG...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCTACCTGTGTTATTGTTaGGCATCTTGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGYLCYC*ASCNRA
Trigger: AGCCCTATTACAAGATGCTCAACAATAACACAGGTA...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTAATACATTTCAAGGCTaGAAGATTGCTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVNTFQG*KIALCL
Trigger: CAAGCACAAAGCAATCTTTCAGCCTTGAAATGTATT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAATCTTCCGGATCGAGTaGCTGGTGGAGGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTIFRIE*LVEAVC
Trigger: GCACACTGCCTCCACCAGTCACTCGATCCGGAAGAT...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCAGAAATGCTCAAGAATaGGGTCGCGAAGTTAGACAA +
Preference number: 4 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCRNAQE*GREVRQ
Trigger: TTGTCTAACTTCGCGACCTCATTCTTGAGCATTTCT...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGTCACGCCTTCCCCTaGCTGCAACAGATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKGHAFP*LQQIPS
Trigger: AGAGGGGATCTGTTGCAGGCAGGGGAAGGCGTGACC...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR GCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAATGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QLQLLRSCCSAPILIHMECLWSP*HRRLPA
Trigger: TGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACA...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGCGCAGCACATGAGCTaGTGTGAGGATCCAGGACGC +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKAQHMS*CEDPGR
Trigger: GCGTCCTGGATCCTCACAGCAGCTCATGTGCTGCGC...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATCCTCTGCTACTGACTaGCCACAGCTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTSSATD*PQLVVL
Trigger: CAGCACCACCAGCTGTGGGCAGTCAGTAGCAGAGGA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGGAAAGGAGAAATGGCTaGTTTCATCGGAGGATCGTC +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEERRNG*FHRRIV
Trigger: GACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTC...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCATGGGAGAGGCATTTTaGTTGGAAAACACTTATGGC +
Preference number: 4 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCMGEAF*LENTYG
Trigger: GCCATAAGTGTTTTCCAAGCAAAATGCCTCTCCCAT...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGCCAGGCGACTGGATCTaGCCAAACATATTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEPGDWI*PNILFS
Trigger: GCTAAACAATATGTTTGGCCAGATCCAGTCGCCTGG...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTCACCTCTGAATCACTaGGATAGGAGTCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLSPLNH*DRSLDN
Trigger: GTTATCCAGACTCCTATCCCAGTGATTCAGAGGTGA...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGCATTCAGAGCTCTTaGGGTAAGGGTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHGIQSS*GKGLGS
Trigger: ACTTCCCAAACCCTTACCCCAAGAGCTCTGAATGCC...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGAGGATCAGGACACTGTaGCTCTGGGTGCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKRIRTL*LWVLMG
Trigger: ACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCT...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTTCAGACACTCAATCTaGAATGTGTCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFFRHSI*NVSIST
Trigger: TGTGGAGATGGACACATTCCAGATTGAGTGTCTGAA...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGATGTCTGCATTGTGTaGGGTCCCGTCATTCACTCT +
Preference number: 4 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHDVCIV*GPVIHS
Trigger: AGAGTGAATGACGGGACCCCACACAATGCAGACATC...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGAGCCCATCTCTTCTTTaGGTGGTGTCTCTAGCCGAG +
Preference number: 4 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGSPSLL*VVSLAE
Trigger: CTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCT...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGTGTTCCAGCTCTCCTaGGGCTCTACAGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEVFQLS*GSTVYN
Trigger: ATTGTAGACTGTAGAGCCCCAGGAGAGCTGGAACAC...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTGCACCACCCAGCGCTaGCTCAAGTCATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHCTTQR*LKSSKM
Trigger: CATCTTTGATGACTTGAGCCAGCGCTGGGTGGTGCA...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGGGAGGGCTTATATCTTaGAGCTCTGGAGGGCATAAA +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKGGLIS*SSGGHK
Trigger: TTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCTGTATTCTAGAGAGGTaGGTTTTGGTTGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTCILER*VLVAQR
Trigger: TCTTTGTGCAACCAAAACCCACCTCTCTAGAATACA...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp TTTTCACTGCCTGCCATGGGTGAGCCTCTGATTCCTTaGACTCTGAAAAATGAAGGAGTGGGTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FSLPAMGEPLIP*TLKNEGVGPSE
Trigger: TTCAGAGGGACCCACTCCTTCATTTTTCAGAGTCAAAGGAATCAGAGGCTCACCCATGGCAGGCAGTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
3UTR CAA 72 bp GCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTaGGGATGCCTTGGGATGATTCCAAAACAGCATTAC +
Preference number: 4 (lower is better)
Translates to: AQAVLEMGRYGV*GCLGMIPKQHY
Trigger: GTAATGCTGTTTTGGAATCATCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAACCGGTGTGGTGTCCGTaGTGCCTTATCTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEPVWCP*CLIFVL
Trigger: CAGAACAAAGATAAGGCATCACGGACACCACACCGG...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGATCACCCCAGTCCTTTaGGTGAAGAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGITPVL*VKRLSL
Trigger: CAGTGACAACCTCTTCACTCAAAGGACTGGGGTGAT...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGCAGGGGTCTTGGGAGTaGTCCATTTCTGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKQGSWE*SISGCL
Trigger: CAGACATCCAGAAATGGATCACTCCCAAGACCCCTG...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGGGGCAGCTGAGCTGTTaGCTGCCCCCGATTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKGQLSC*LPPICL
Trigger: GAGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCC...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATGGAGAGTGGTGTGTTTaGCGCCGAGATGCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNGEWCV*RRDAVH
Trigger: ATGAACAGCATCTCGGCGTCAAACACACCACTCTCC...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCCACAAAGAGGTAGAATaGCTTGTTTATAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTHKEVE*LVYRTR
Trigger: TCTGGTTCTATAAACAAGTCATTCTACCTCTTTGTG...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCCCTACCGAAAAGATCTaGTCCTTCCCTTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCPTEKI*SFPSLL
Trigger: AAGGAGGGAAGGGAAGGAGCAGATCTTTTCGGTAGG...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTCLWSP*HRRLPA
Trigger: TGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAAATATGTCCTCAAACTaGAGGTTGACCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRNMSSN*RLTMKP
Trigger: GGGTTTCATGGTCAACCTGCAGTTTGAGGACATATT...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAACCATTTCTGGATGTCTaGATTGTGTGGGGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEPFLDV*IVWGPV
Trigger: GACGGGACCCCACACAATGCAGACATCCAGAAATGG...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR GCA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTCCTCAGTCTCCAGACTaGCCAGGGTTCTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCPQSPD*PGFSPH
Trigger: GTGAGGGGAGAACCCTGGGCAGTCTGGAGACTGAGG...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGACTTCTCTGGCTGCCTTaGTCTGATGGAGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRLLWLP*SDGDFQ
Trigger: CTGAAAATCTCCATCAGAGCAAGGCAGCCAGAGAAG...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGTTTAGCTCCACGGTGTaGGCTGAAGCCTTTGACAGG +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKFSSTV*AEAFDR
Trigger: CCTGTCAAAGGCTTCAGCCCACACCGTGGAGCTAAA...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGTCACCTCTGAATCACTaGGATAGGAGTCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKESPLNH*DRSLDN
Trigger: GTTATCCAGACTCCTATCCCAGTGATTCAGAGGTGA...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHKVAST*SSVSTF
Trigger: GAAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTT...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CCA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTGAGAGGACCACCTCCTaGCCGGGAGTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVERTTS*PGVCSV
Trigger: CACAGAGCAGACTCCCGGCCAGGAGGTGGTCCTCTC...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATGGCATTCAGAGCTCTTaGGGTAAGGGTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHGIQSS*GKGLGS
Trigger: ACTTCCCAAACCCTTACCCCAAGAGCTCTGAATGCC...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGTGCTGATGGGTTCTaGGGCTTTCTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKGADGF*GFLSTE
Trigger: TTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACC...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACAGGATCAGGACACTGTaGCTCTGGGTGCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDRIRTL*LWVLMG
Trigger: ACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGCAGCTGACGAGCACTTaGTCTTTGAAGAAATACTTG +
Preference number: 4 (lower is better)
Translates to: RSCCSAPILIHMERGTGVQLTST*SLKKYL
Trigger: CAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTG...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGTTCAGACACTCAATCTaGAATGTGTCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVFRHSI*NVSIST
Trigger: TGTGGAGATGGACACATTCCAGATTGAGTGTCTGAA...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGCCTGAGGCCACATaGTTGTATATTAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: QPISSLGGVSSREWHLSLQPEAT*LYIKSF
Trigger: AAAAGATTTAATATACAACCATGTGGCCTCAGGCTG...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCTTGGCACAGAGGCCTTaGTTGAGCTCCTGCATTGTA +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFLAQRP*LSSCIV
Trigger: TACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAA...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGTCTCAGGGGCTTCTCTaGCTGCCTTGCTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLSQGLL*LPCSDG
Trigger: TCCATCAGAGCAAGGCAGCCAGAGAAGCCCCTGAGA...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGCACAGATCATGTCCCTaGTCACTTTCTTCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWHRSCP*SLSSSA
Trigger: CGCTGAAGAAGAAAGTGACCAGGGACATGATCTGTG...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGTGTCTTGGGATGCCTTaGGATGATTCCAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKECLGMP*DDSKTA
Trigger: TGCTGTTTTGGAATCATCCCAAGGCATCCCAAGACA...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACACTGTGGACAAGGCTCTaGTCCAGTCACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTLWTRL*SSHLFW
Trigger: CCAGAAGAGGTGACTGGACCAGAGCCTTGTCCACAG...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGATAAACAGAATAAGCTaGGTCCAGCCAGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRINRIS*VQPEVS
Trigger: ACTGACTTCTGGCTGGACCCAGCTTATTCTGTTTAT...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACGGGCATCAAAGCCTGTaGAACGCTCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDGHQSL*NAPHWR
Trigger: TCTCCAATGAGGAGCGTTTCACAGGCTTTGATGCCC...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATATCACCCCAGTCCTTTaGGTGAAGAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNITPVL*VKRLSL
Trigger: CAGTGACAACCTCTTCACTCAAAGGACTGGGGTGAT...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGAATGCAAAGATTCTCTaGCATGTGTGTCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SCCSAPILIHMERGTGVLNAKIL*HVCPDV
Trigger: AACATCTGGACACACATGTCAGAGAATCTTTGCATT...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGGAGAGGTGTGTCACTaGTCAATGCTAAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTGEVCH*SMLRPR
Trigger: CCTGGGTCTTAGCATTGATCAGTGACACACCTCTCC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACGCTTTGAGGACCCTTTaGGATGAGGGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDALRTL*DEGGGL
Trigger: AAGTCCTCCTCCCTCATCTCAAAGGGTCCTCAAAGC...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGTGAATTGCTGTCCCTaGGTATTCAGCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDVNCCP*VFSLGL
Trigger: AAGCCCCAGGCTGAATACTCAGGGACAGCAATTCAC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACACCAGAGGCAGGCTGTaGATTGCTGTCCCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDTRGRL*IAVPEY
Trigger: ATACTCAGGGACAGCAATTCACAGCCTGCCTCTGGT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGTTTTGGTGTTGGTTCTaGTCCCAGAAAAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLFWCWF*SQKKSP
Trigger: TGGACTCTTTTTCTGGGATCAGAACCAACACCAAAA...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCGCAGCACTCATGGTATaGAATTATAGCTTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCAALMV*NYSFSY
Trigger: ATAACTGAAGCTATAATTTCATACCATGAGTGCTGC...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGCAAGGCACGTGTCTTTaGCGCCCTCGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKQGTCL*RPRSSQ
Trigger: CTGGCTACTACGAGGGCGGCAAAGACACGTGCCTTG...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGGTGTGCTGTCGGAAGTaGGGTGTAGCTTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKVCCRK*GVASLR
Trigger: CCTGAGCGAAGCTACACCGCACTTCCGACAGCACAC...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAATCTACCTCATTTTCCTaGCTTGGGTGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKSTSFS*LGCSRL
Trigger: CAGCCGGGAGCACCCAAGGCAGGAAAATGAGGTAGA...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR CCA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCCAGGCGACTGGATCTaGCCAAACATATTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGPGDWI*PNILFS
Trigger: GCTAAACAATATGTTTGGCCAGATCCAGTCGCCTGG...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATCCAGGCGACTGGATCTaGCCAAACATATTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHPGDWI*PNILFS
Trigger: GCTAAACAATATGTTTGGCCAGATCCAGTCGCCTGG...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGATCCGAAACCCATCTaGGACAGTGATATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEDPKPI*DSDIPS
Trigger: ACTTGGAATATCACTGTCCCAGATGGGTTTCGGATC...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEKVAST*SSVSTF
Trigger: GAAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTT...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKKVAST*SSVSTF
Trigger: GAAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTT...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATGGCATTCAGAGCTCTTaGGGTAAGGGTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNGIQSS*GKGLGS
Trigger: ACTTCCCAAACCCTTACCCCAAGAGCTCTGAATGCC...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAAGGATCAGGACACTGTaGCTCTGGGTGCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKRIRTL*LWVLMG
Trigger: ACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCT...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGGCTCGATTTTCCCATaGACAGGAGGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDGSIFP*TGGCSS
Trigger: AGAGCTACAGCCTCCTGTCCATGGGAAAATCGAGCC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGTTCAGACACTCAATCTaGAATGTGTCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKFRHSI*NVSIST
Trigger: TGTGGAGATGGACACATTCCAGATTGAGTGTCTGAA...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGATTCATCCAGACTCCTTaGGCAGAACAGGTATATATA +
Preference number: 4 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRFIQTP*AEQVYI
Trigger: TATATATACCTGTTCTGCCCAAGGAGTCTGGATGAA...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAAAACCACTTGTCATTTaGCACTCTCGAAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRKPLVI*HSRSVL
Trigger: GAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAAGACTGGTATCACCGTaGTGTCTCTACGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKRLVSP*CLYAGS
Trigger: GCTCCCAGCGTAGAGACACCACGGTGATACCAGTCT...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGGATGGGTTTGATAAGTaGTCAGGAGTGAATAAAGGC +
Preference number: 4 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKDGFDK*SGVNKG
Trigger: GCCTTTATTCACTCCTGACCACTTATCAAACCCATC...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATCAGCAGGACACAGTGTaGGTCTTTTCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHQQDTV*VFSFSR
Trigger: CCTGGAAAAAGAAAAGACCCACACTGTGTCCTGCTG...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCAGCCTGGCAGGATTTaGGTGACTTCTAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLQPGRI*VTSNVP
Trigger: GGGCACATTAGAAGTCACCCAAATCCTGCCAGGCTG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCTTTTGTGGGAGGAGCTaGTATAATAAAGGACATCTT +
Preference number: 4 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTAFCGRS*YNKGHL
Trigger: AAGATGTCCTTTATTATACCAGCTCCTCCCACAAAA...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGATTCCAAGTCACCTCTaGATCACTGGGATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKIPSHL*ITGIGV
Trigger: GACTCCTATCCCAGTGATTCAGAGGTGACTTGGAAT...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTGGAAGTCAGGGCTGGTaGTCACCCCAGTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVGSQGW*SPQSFE
Trigger: CTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCC...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAACGAGCACTTGGTCTTTaGAGAAATACTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QLQLLRSCCSAPILIHMERALGL*RNTWLG
Trigger: CCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCG...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR TCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCGGAATAGTGTTTGAATaGTGGGCAAACCCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCGIVFE*WANPQV
Trigger: CACTTGAGGGTTTGCCCATCATTCAAACACTATTCC...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGGAGAAACCCCAGGCATaGAGGTGCTCCAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKEKPQA*RCSKGS
Trigger: TGATCCCTTGGAGCACCTTCATGCCTGGGGTTTCTC...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACAGATCGTCAGAGCTTTaGGGACCCTTTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDRSSEL*GPFEMR
Trigger: CCTCATCTCAAAGGGTCCTCAAAGCTCTGACGATCT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCCTACCGAAAAGATCTaGTCCTTCCCTTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLPTEKI*SFPSLL
Trigger: AAGGAGGGAAGGGAAGGAGCAGATCTTTTCGGTAGG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR GCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCTCTCTCCTTTGACTTaGTCTTGCACTCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLLSPLT*SCTPRN
Trigger: GTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR GCA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAAATATGTCCTCAAACTaGAGGTTGACCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: LFPLETPDGSNNAEALYRNMSSN*RLTMKP
Trigger: GGGTTTCATGGTCAACCTGCAGTTTGAGGACATATT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCCTCAAGTGGAGAATTTaGTTTCACACACGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCLKWRI*FHTRSS
Trigger: GCTGCTACGTGTGTGAAAGCAAATTCTCCACTTGAG...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGCATAGACCTGCTTGCTaGCGCATTCTTCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKHRPAC*RILQVP
Trigger: GGGGACCTGAAGAATGCGGCAGCAAGCAGGTCTATG...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTTGTAGGAAACAGTGTATGCTATaGACTCTGTTAAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: SWTLAAVQELAQLISACRKQCML*TLLSAM
Trigger: CATAGCACTTAACAGAGTGCATAGCATACACTGTTT...CCTACAAGCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACACTAGAACCAGGTGTCTaGCTTCCCAAACCACAATCC +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTLEPGV*LPKPQS
Trigger: GGATTGTGGTTTGGGAAGGCAGACACCTGGTTCTAG...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCACCGATTGTAATTTTTaGCTTTTGGTTACATTGGCT +
Preference number: 4 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTATDCNF*LLVTLA
Trigger: AGCCAATGTAACCAAAAGGCAAAAATTACAATCGGT...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGCAGCAGCATTTTGTCTaGATCAAAGTTCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKQQHFV*IKVPLN
Trigger: GTTCAAAGGAACTTTGATGCAGACAAAATGCTGCTG...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGAGAAGTCAGTATTTGTaGACAAACCTTGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKERSQYL*TNLEAI
Trigger: AATGGCCTCAAGGTTTGTGCACAAATACTGACTTCT...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGATACTCCAGCCCTCTaGTTCTATGGCTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDDTPAL*FYGSVR
Trigger: TCTCACAGAGCCATAGAAGCAGAGGGCTGGAGTATC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGTGTGTCTCTGGAATTaGCTGGCATTCTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKVCLWN*LAFSIQ
Trigger: CTGAATGGAGAATGCCAGCCAATTCCAGAGACACAC...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAACTGGGATAGGAGTCTaGATAACCAGGCGACTGGAT +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTTGIGV*ITRRLD
Trigger: ATCCAGTCGCCTGGTTATCCAGACTCCTATCCCAGT...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGTGCTGATGGGTTCTaGGGCTTTCTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKGADGF*GFLSTE
Trigger: TTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACC...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTAGGATCAGGACACTGTaGCTCTGGGTGCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCRIRTL*LWVLMG
Trigger: ACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCT...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp ACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCGCCTTTACCTACTCATGGTaGTTAAGAAAGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: TCKPQKTEPLMMTFQPCAFTYSW*LRKQQQ
Trigger: CTGTTGCTGCTTTCTTAACCACCATGAGTAGGTAAA...GGCGCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGTTCATCCAGACTCCTTaGGCAGAACAGGTATATATA +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEFIQTP*AEQVYI
Trigger: TATATATACCTGTTCTGCCCAAGGAGTCTGGATGAA...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAACAGCCTGGCAGGATTTaGGTGACTTCTAATGTGCCC +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKQPGRI*VTSNVP
Trigger: GGGCACATTAGAAGTCACCCAAATCCTGCCAGGCTG...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAAAAGGACATCTTGAGTaGACATTTACTATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGKGHLE*TFTIVL
Trigger: GAGAACAATAGTAAATGTCCACTCAAGATGTCCTTT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGAGAAAAAGAGTCCACTaGACATGTGTTTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLRKRVH*TCVFVG
Trigger: TCCCACAAAAACACATGTCCAGTGGACTCTTTTTCT...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp GTAGCCTTTCAGATAATACATTTCAAGGCTGAAAGATaGCTTTGTGCTTGTCTGGAGCAGCAGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: VAFQIIHFKAER*LCACLEQQVWT
Trigger: CGTCCACACCTGCTGCTCCAGACAAGCACAAAGCAATCTTTCAGCCTTGAAATGTATTATCTGAAAGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATCCTGACAGGAGTATTTaGTCTCAGACTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNPDRSI*SQTCMW
Trigger: CCACATACAAGTCTGAGATCAAATACTCCTGTCAGG...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAATACCTGTGTTATTGTTaGGCATCTTGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEYLCYC*ASCNRA
Trigger: AGCCCTATTACAAGATGCTCAACAATAACACAGGTA...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGCCTAGAAGGTATAAATaGTACTCTCTTCATCTAGGT +
Preference number: 4 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEPRRYK*YSLHLG
Trigger: ACCTAGATGAAGAGAGTATCATTTATACCTTCTAGG...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGAATTTTAAAGTTGAATaGGCTGCAATTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKNFKVE*AAIGGS
Trigger: ACTACCCCCAATTGCAGCTCATTCAACTTTAAAATT...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGATTCACTCTGTCACTTaGTCTGACTTGAGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKIHSVT*SDLSSL
Trigger: GAGCGAACTCAAGTCAGAGCAAGTGACAGAGTGAAT...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CCA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCTTCAGACACTCAATCTaGAATGTGTCCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCFRHSI*NVSIST
Trigger: TGTGGAGATGGACACATTCCAGATTGAGTGTCTGAA...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATTCTGGCAGGTGCTGTaGTCAACAATCGGGATTTCA +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTFWQVL*STIGIS
Trigger: TGAAATCCCGATTGTTGACCACAGCACCTGCCAGAA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGAGCTTCTGATCCCTTaGAGGGCTTATATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTELLIP*RAYILE
Trigger: CTCCAAGATATAAGCCCTCCAAGGGATCAGAAGCTC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp AAACAGAATAAGCTGGGTCCAGCCAGAAGTCAGTATTaGTGCACAAACCTTGAGGCCATTTCAAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KQNKLGPARSQY*CTNLEAISSPV
Trigger: AACAGGACTTGAAATGGCCTCAAGGTTTGTGCACAAATACTGACTTCTGGCTGGACCCAGCTTATTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCTACCTGTGTTATTGTTaGGCATCTTGTAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFYLCYC*ASCNRA
Trigger: AGCCCTATTACAAGATGCTCAACAATAACACAGGTA...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAATCAAGTCATCAAAGATaGCAAAGGCCCCACCGCTAT +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKSSHQR*QRPHRY
Trigger: ATAGCGGTGGGGCCTTTGTCATCTTTGATGACTTGA...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATGGGATGCCTTGGGATaGTTCCAAAACAGCATTACA +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTWDALG*FQNSIT
Trigger: TGTAATGCTGTTTTGGAATCATCCCAAGGCATCCCA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR GCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAACTTCTCTGGCTGCCTTaGTCTGATGGAGATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKLLWLP*SDGDFQ
Trigger: CTGAAAATCTCCATCAGAGCAAGGCAGCCAGAGAAG...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATTGTTTGACGCCGAGATaGTGTTCATTTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNCLTPR*CSFSSD
Trigger: GTCAGATGAAAATGAACAGCATCTCGGCGTCAAACA...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTACTGGGATAGGAGTCTaGATAACCAGGCGACTGGAT +
Preference number: 4 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCTGIGV*ITRRLD
Trigger: ATCCAGTCGCCTGGTTATCCAGACTCCTATCCCAGT...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTGATGTCTGCATTGTGTaGGGTCCCGTCATTCACTCT +
Preference number: 4 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCDVCIV*GPVIHS
Trigger: AGAGTGAATGACGGGACCCCACACAATGCAGACATC...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAAGCCGGTTGAGAAAGTaGACACTTCCCAATCATTCC +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKSRLRK*TLPNHS
Trigger: GGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCT...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGTTATCAGGGGGAAAATaGCTTCATTGTATCTTAGAT +
Preference number: 4 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLLSGGK*LHCILD
Trigger: ATCTAAGATACAATGAAGCCATTTTCCCCCTGATAA...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp CATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTaGATGAGCCGGTTGAGAAAGTGGACACTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: HLHVPFIDKGVC*MSRLRKWTLPN
Trigger: ATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTCGAGCACTTGGTCTTTaGAGAAATACTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCRALGL*RNTWLG
Trigger: CCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCG...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAACCTGACAGGAGTATTTaGTCTCAGACTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKPDRSI*SQTCMW
Trigger: CCACATACAAGTCTGAGATCAAATACTCCTGTCAGG...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTCTCTCTCCTTTGACTTaGTCTTGCACTCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVLSPLT*SCTPRN
Trigger: GTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAG...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGCTCCCAAAACCTGAATaGTCTTCTCCTAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKLPKPE*SSPRGR
Trigger: CCTTCCTCTAGGAGAAGAGCATTCAGGTTTTGGGAG...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR GCA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACTATGGTGTCTTGGGATaGCTTGGGATGATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDYGVLG*LGMIPK
Trigger: TTTTGGAATCATCCCAAGGCATCCCAAGACACCATA...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGACAGGGAAAGAGACTTaGACAAGCTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKTGKET*TSSGTQ
Trigger: CTGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTGT...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGAGAGGCATTTTGCTTaGAAAACACTTATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTERHFA*KTLMAL
Trigger: CAAGGCCATAAGTGTTTTCCAAGCAAAATGCCTCTC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp GTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTaGAGTGGACATTTACTATTGTTCTCCCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: VFVGGAGIIKDI*SGHLLLFSLHV
Trigger: CACATGGAGGGAGAACAATAGTAAATGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTAGCAGCTTCAACTGCTaGGATCATGTTGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVSSFNC*DHVVQH
Trigger: GTGCTGAACAACATGATCTCAGCAGTTGAAGCTGCT...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR TCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGCCTGACAGGAGTATTTaGTCTCAGACTTGTATGTGG +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKPDRSI*SQTCMW
Trigger: CCACATACAAGTCTGAGATCAAATACTCCTGTCAGG...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCCAAATGTGTTCTaGGTTGACAATGGGAATTTA +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKGPNVF*VDNGNL
Trigger: TAAATTCCCATTGTCAACTCAGAACACATTTGGGCC...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACTTTCTTTTACCTCCATaGCTTTCCAAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDFLLPP*LSKAAL
Trigger: AAGTGCTGCTTTGGAAAGTCATGGAGGTAAAAGAAA...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAACAGCTGACGAGCACTTaGTCTTTGAAGAAATACTTG +
Preference number: 4 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKQLTST*SLKKYL
Trigger: CAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTG...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CCA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGATTCCAAAGCAGCACTTaGCAGGGTTTGTTCTATTAC +
Preference number: 4 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGFQSST*QGLFYY
Trigger: GTAATAGAACAAACCCTGCCAAGTGCTGCTTTGGAA...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGAATACATTTCAAGGCTaGAAGATTGCTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLNTFQG*KIALCL
Trigger: CAAGCACAAAGCAATCTTTCAGCCTTGAAATGTATT...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR TCA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACACTAAGGTGCATTTATTaGAAACAGTGTATGCTATGC +
Preference number: 4 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTLRCIY*KQCMLC
Trigger: GCATAGCATACACTGTTTTCAATAAATGCACCTTAG...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR TCA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACGCATCAAAGTTCCTTTaGACCGATTGTAATTTTTGC +
Preference number: 4 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDASKFL*TDCNFC
Trigger: GCAAAAATTACAATCGGTTCAAAGGAACTTTGATGC...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
3UTR CAA 72 bp ACCTCCATGACTTTCCAAAGCAGCACTTGGCAGGGTTaGTTCTATTACATGGTAGTCAATTACATATGTTTC +
Preference number: 4 (lower is better)
Translates to: TSMTFQSSTWQG*FYYMVVNYICF
Trigger: GAAACATATGTAATTGACTACCATGTAATAGAACAAACCCTGCCAAGTGCTGCTTTGGAAAGTCATGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CCA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTTGCTTTACCTACTCATaGTGGTTAAGAAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVCFTYS*WLRKQQ
Trigger: TTGCTGCTTTCTTAACCACCATGAGTAGGTAAAGCA...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
3UTR CAA 72 bp CAGATTCTCAAAAATCCACACTCTGTGAGTTATTATTaGCTTTACCTACTCATGGTGGTTAAGAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QILKNPHSVSYY*LYLLMVVKKAA
Trigger: TGCTGCTTTCTTAACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAGAATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR GCA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGAGGAAAATATACAGATaGGGCATTCAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKRKIYR*GIQFNV
Trigger: AACATTGAACTGAATGCCGCATCTGTATATTTTCCT...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS CCA 90 bp AGCCACCTCATTTTCCTGCCTTGGGTGCTCCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTGCCTGTGAGCTCGTGCCCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SHLIFLPWVLPAARP*SSQLDLPVSSCPVW
Trigger: CCACACCGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
CDS CCA 90 bp AGCACCCTCATTTTCCTGCCTTGGGTGCTCCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTGCCTGTGAGCTCGTGCCCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: STLIFLPWVLPAARP*SSQLDLPVSSCPVW
Trigger: CCACACCGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392470.6
CDS CCA 90 bp GTAGGTCTCATTTTCCTGCCTTGGGTGCTCCCGGCTGCCCGGCCTTaGTCCTCCCAGCTTGACTTGCCTGTGAGCTCGTGCCCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VGLIFLPWVLPAARP*SSQLDLPVSSCPVW
Trigger: CCACACCGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGACCAAGGCCGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGACCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392475.2
CDS-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGCGGGCAGCTGAGCTGTaGACTGCCCCCGATTTGTCT +
Preference number: 5 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQRAAEL*TAPDLS
Trigger: AGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCCG...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS TCA 90 bp TCACCGTGGTGTCTCTACGCTGGGAGCGCAGCACATGAGCTGCTGTaGGGATCCAGGACGCAGAGAGCAGGGCCCCACTCCCAAACCACT +
Preference number: 5 (lower is better)
Translates to: SPWCLYAGSAAHELL*GSRTQRAGPHSQTT
Trigger: AGTGGTTTGGGAGTGGGGCCCTGCTCTCTGCGTCCTGGATCCTCACAGCAGCTCATGTGCTGCGCTCCCAGCGTAGAGACACCACGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS TCA 90 bp GAGACTGGTATCACCGTGGTGTCTCTACGCTGGGAGCGCAGCACATaGGCTGCTGTGAGGATCCAGGACGCAGAGAGCAGGGCCCCACTC +
Preference number: 5 (lower is better)
Translates to: ETGITVVSLRWERST*AAVRIQDAESRAPL
Trigger: GAGTGGGGCCCTGCTCTCTGCGTCCTGGATCCTCACAGCAGCTCATGTGCTGCGCTCCCAGCGTAGAGACACCACGGTGATACCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 90 bp CAGTTCCTCCCAAACCCCCAGTGTGGCCAATGGTCAGGTTATTGCTaGTCCTTCACCCTCTGGCCAGTGTGCTGCTGCCCAGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QFLPNPQCGQWSGYC*SFTLWPVCCCPAPG
Trigger: CCCAGGGGCTGGGCAGCAGCACACTGGCCAGAGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGGGAGGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCCAGGACACCAGGCCTaGCACCACCCAGCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVPGHQA*HHPALA
Trigger: AGCCAGCGCTGGGTGGTGCAAGGCCTGGTGTCCTGG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS TCA 90 bp GCATGGCAATCCAGGGAGTGGTGCCTTTCTGGGCTGGGCGTCCATTaGAGATCCTGGCCATCAGCTTCCGGGAGAACTTGGGGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: AWQSREWCLSGLGVH*RSWPSASGRTWGAH
Trigger: GTGGGCTCCCCAAGTTCTCCCGGAAGCTGATGGCCAGGATCTTCAATGGACGCCCAGCCCAGAAAGGCACCACTCCCTGGATTGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS GCA 90 bp GTCACGATCCAGCTGGAGCCTAGAAGGGAGCCTCCGCAGAAGGGCTaGCCATTCAGGTGTGACAGCATGGCAATCCAGGGAGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: VTIQLEPRREPPQKG*PFRCDSMAIQGVVP
Trigger: AGGCACCACTCCCTGGATTGCCATGCTGTCACACCTGAATGGGCAGCCCTTCTGCGGAGGCTCCCTTCTAGGCTCCAGCTGGATCGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS GCA 90 bp GGACCACCTCCTGGCCGGGAGTCTGCTCTGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCACCTGGTCCTCAGTTTCTACCCACA +
Preference number: 5 (lower is better)
Translates to: GPPPGRESALCLWSP*HRRLPAPGPQFLPT
Trigger: TGTGGGTAGAAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACACAGAGCAGACTCCCGGCCAGGAGGTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465015.1
CDS CCA 90 bp CCAGGACGCAGAGAGCAGGGCCCCACTCCCAAACCACTTGTCATTTaGCACTCTCGAAGTGTCCTCCACCACTATCAGGGCCTGCCACGG +
Preference number: 5 (lower is better)
Translates to: PGRREQGPTPKPLVI*HSRSVLHHYQGLPR
Trigger: CCGTGGCAGGCCCTGATAGTGGTGGAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGGGGCCCTGCTCTCTGCGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 90 bp AGGGGAGGCAGGCCCCGAGGAAGTAAGTCAGCTCACCGTTCCACCTaGGGCTCCACAACACTTTGTGGTAAGCCCATCTGCTCCCACACC +
Preference number: 5 (lower is better)
Translates to: RGGRPRGSKSAHRST*GSTTLCGKPICSHT
Trigger: GGTGTGGGAGCAGATGGGCTTACCACAAAGTGTTGTGGAGCCCCAGGTGGAACGGTGAGCTGACTTACTTCCTCGGGGCCTGCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS-3UTR CAA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCCTCATTTTCCTGCCTaGGGTGCTCCCGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVPHFPA*GAPGCP
Trigger: CGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGACGGTGACATGCTCCTaGGAGACTGGTATCACCGTG +
Preference number: 5 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQTVTCS*ETGITV
Trigger: CACGGTGATACCAGTCTCCAAGGAGCATGTCACCGT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGCTAAGAGAGAGGGGCTaGGCTATGAGCCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQLRERG*AMSHLP
Trigger: TGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAG...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS TCA 90 bp GAGCAGTTCTTCCTTTCACAGCTGTCTCGGCCCCCAGTCCAACCCTaGGGCCCCGAGAGTGTGAAACGGGAGTGGGATGGCTTAGCATGG +
Preference number: 5 (lower is better)
Translates to: EQFFLSQLSRPPVQP*GPESVKREWDGLAW
Trigger: CCATGCTAAGCCATCCCACTCCCGTTTCACACTCTCGGGGCCTCAGGGTTGGACTGGGGGCCGAGACAGCTGTGAAAGGAAGAACTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 90 bp CCCAACCCTGCCTGGACCCCTGTCCGTACCAGGGGAAGAGGTCTTTaGAGGAAGGTCCCTTACCTGCTGAATGGGTCTGGCCTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: PNPAWTPVRTRGRGL*RKVPYLLNGSGLVR
Trigger: TCTCACCAGGCCAGACCCATTCAGCAGGTAAGGGACCTTCCTTCAAAGACCTCTTCCCCTGGTACGGACAGGGGTCCAGGCAGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS GCA 90 bp GGACCACCTCCTGGCCGGGAGTCTGCTCTGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCACCTGGTCCTCAGTTTCTACCTTCA +
Preference number: 5 (lower is better)
Translates to: GPPPGRESALCLWSP*HRRLPAPGPQFLPS
Trigger: TGAAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACACAGAGCAGACTCCCGGCCAGGAGGTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392475.2
ENST00000460839.5
CDS GCA 90 bp GGACCACCTCCTGGCCGGGAGTCTGCTCTGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCACCTGGTCCTCAGTTTCTACCTCAT +
Preference number: 5 (lower is better)
Translates to: GPPPGRESALCLWSP*HRRLPAPGPQFLPH
Trigger: ATGAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACACAGAGCAGACTCCCGGCCAGGAGGTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS GCA 90 bp GGACCACCTCCTGGCCGGGAGTCTGCTCTGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCACCTGGTCCTCAGTTTCTACCACAT +
Preference number: 5 (lower is better)
Translates to: GPPPGRESALCLWSP*HRRLPAPGPQFLPH
Trigger: ATGTGGTAGAAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACACAGAGCAGACTCCCGGCCAGGAGGTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490558.5
CDS-3UTR CAA 90 bp TTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGTCCTCCCAGCTTGACTaGCCTGTGAGCTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: FSTHSNPHGKGHGGVVGGSSQLD*PVSSCP
Trigger: CGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGA...CCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATCCCTGCCACAGAAGGTaGCCAGCACCTGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYPCHRR*PAPGPQ
Trigger: CTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGG...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 90 bp ACACCAGGCCTTGCACCACCCAGCGCTGGCTCAAGTCATCAAAGATaGCAAAGGCCCCACCGCTATCTCCAAGGCACGTGTCTTTGCCGC +
Preference number: 5 (lower is better)
Translates to: TPGLAPPSAGSSHQR*QRPHRYLQGTCLCR
Trigger: GCGGCAAAGACACGTGCCTTGGAGATAGCGGTGGGGCCTTTGTCATCTTTGATGACTTGAGCCAGCGCTGGGTGGTGCAAGGCCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 90 bp CCATTCAGGTGTGACAGCATGGCAATCCAGGGAGTGGTGCCTTTCTaGGCTGGGCGTCCATTGAAGATCCTGGCCATCAGCTTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PFRCDSMAIQGVVPF*AGRPLKILAISFRE
Trigger: CTCCCGGAAGCTGATGGCCAGGATCTTCAATGGACGCCCAGCCCAGAAAGGCACCACTCCCTGGATTGCCATGCTGTCACACCTGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS CCA 90 bp AAGTCTGAATCACGTAGGGTCGGATCTTCCGGATCGAGTGACTGGTaGAGGCAGTGTGCGGCGGTCACGATCCAGCTGGAGCCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: KSESRRVGSSGSSDW*RQCAAVTIQLEPRR
Trigger: CCTTCTAGGCTCCAGCTGGATCGTGACCGCCGCACACTGCCTCCACCAGTCACTCGATCCGGAAGATCCGACCCTACGTGATTCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS CCA 90 bp AGCAAGTCTGAATCACGTAGGGTCGGATCTTCCGGATCGAGTGACTaGTGGAGGCAGTGTGCGGCGGTCACGATCCAGCTGGAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: SKSESRRVGSSGSSD*WRQCAAVTIQLEPR
Trigger: TCTAGGCTCCAGCTGGATCGTGACCGCCGCACACTGCCTCCACCAGTCACTCGATCCGGAAGATCCGACCCTACGTGATTCAGACTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS-3UTR CAA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCCCTCATTTTCCTGCCTaGGGTGCTCCCGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTPHFPA*GAPGCP
Trigger: CGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGG...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGTCGTCCTCCCTCTCCTaGCACTCGTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQSSSLS*HSSTST
Trigger: TGTGGATGTGGACGAGTGCAAGGAGAGGGAGGACGA...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGGAAGAAATACTTGGCTaGGGAGGGCTCGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQEEILG*GGLDFP
Trigger: GGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTC...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCGGGCAGCTGAGCTGTaGACTGCCCCCGATTTGTCT +
Preference number: 5 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVRAAEL*TAPDLS
Trigger: AGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCCG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGAGGGTTTATTTCCACTaGAGACCCCTGATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQRVYFH*RPLMGA
Trigger: TGCTCCCATCAGGGGTCTCAAGTGGAAATAAACCCT...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS GCA 90 bp TTGTCATTTGGCACTCTCGAAGTGTCCTCCACCACTATCAGGGCCTaGCACGGGAAGAGGCCAGGCTCAGCATTTCGGCCCCCAATGATC +
Preference number: 5 (lower is better)
Translates to: LSFGTLEVSSTTIRA*HGKRPGSAFRPPMI
Trigger: GATCATTGGGGGCCGAAATGCTGAGCCTGGCCTCTTCCCGTGGCAGGCCCTGATAGTGGTGGAGGACACTTCGAGAGTGCCAAATGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 90 bp CACATCATGCAAGCCCAGGTAGACGGTGACATGCTCCTTGGAGACTaGTATCACCGTGGTGTCTCTACGCTGGGAGCGCAGCACATGAGC +
Preference number: 5 (lower is better)
Translates to: HIMQAQVDGDMLLGD*YHRGVSTLGAQHMS
Trigger: GCTCATGTGCTGCGCTCCCAGCGTAGAGACACCACGGTGATACCAGTCTCCAAGGAGCATGTCACCGTCTACCTGGGCTTGCATGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS CCA 90 bp GCCCAGGTCCTGGAAGGCACCTCCGCCTCACTTGTCACAAAGACCTaGGCTCACATGGCTCCCTGTTGCACAGATGCCCTTTCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: AQVLEGTSASLVTKT*AHMAPCCTDALSFL
Trigger: AAGAAAGGAAAGGGCATCTGTGCAACAGGGAGCCATGTGAGCCCAGGTCTTTGTGACAAGTGAGGCGGAGGTGCCTTCCAGGACCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGCCTCATTTTCCTGCCTaGGGTGCTCCCGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLPHFPA*GAPGCP
Trigger: CGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGG...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS TCA 90 bp CTGCCCCCGATTTGTCTCGCACATCATGCAAGCCCAGGTAGACGGTaGCATGCTCCTTGGAGACTGGTATCACCGTGGTGTCTCTACGCT +
Preference number: 5 (lower is better)
Translates to: LPPICLAHHASPGRR*HAPWRLVSPWCLYA
Trigger: AGCGTAGAGACACCACGGTGATACCAGTCTCCAAGGAGCATGTCACCGTCTACCTGGGCTTGCATGATGTGCGAGACAAATCGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS GCA 90 bp GGGATTTCAATCTCCATCAGGGTCTCTGGGAACCTTTGCAAGAACTaGTTCCCCCAGCCGCTGACGATGACCATGGCTCCTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GISISIRVSGNLCKN*FPQPLTMTMAPSCW
Trigger: CCAGCAGGAAGGAGCCATGGTCATCGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACCCTGATGGAGATTGAAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp GGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTaGCCACAGCTGGTGGTGCTGGGGCTGAGGAGCCAAATTCAGTTC +
Preference number: 5 (lower is better)
Translates to: GEMAAFIGGSSSATD*PQLVVLGLRSQIQF
Trigger: GAACTGAATTTGGCTCCTCAGCCCCAGCACCACCAGCTGTGGGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 90 bp TCTCCCGAGTTGTCACTATGGAACAGGATCAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGGGCTTTCTCTCCACAGAAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SPELSLWNRIRTLWL*VLMGSGAFSPQKGP
Trigger: GGGGCCTTTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
CDS CCA 90 bp GAGCAGGATTTGCACGAAGTCTCCCGTTTCAAGTTTTATGTCTCCTaGAGTCCTGGGGAAGGCACCCAGCCCACCCACAGCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: EQDLHEVSRFKFYVS*SPGEGTQPTHSSLL
Trigger: GAGAAGGGAGCTGTGGGTGGGCTGGGTGCCTTCCCCAGGACTCCAGGAGACATAAAACTTGAAACGGGAGACTTCGTGCAAATCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CCA 90 bp GGGAAGAGGTCTTTGAAGGAAGGTCCCTTACCTGCTGAATGGGTCTaGCCTGGTGAGATGTTGCCCTCACCCAGAAGCCAAGGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: GKRSLKEGPLPAEWV*PGEMLPSPRSQGRV
Trigger: GACTCTGCCTTGGCTTCTGGGTGAGGGCAACATCTCACCAGGCCAGACCCATTCAGCAGGTAAGGGACCTTCCTTCAAAGACCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 90 bp AAGCATTTCTCCTCCCAGTTCCTCCCAAACCCCCAGTGTGGCCAATaGTCAGGTTATTGCTGGTCCTTCACCCTCTGGCCAGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: KHFSSQFLPNPQCGQ*SGYCWSFTLWPVCC
Trigger: GCAGCACACTGGCCAGAGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGGGAGGAACTGGGAGGAGAAATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGTCCTCTCTCTCTCCTTaGACTTGCTCTTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: SAPILIHMERGTGVLWVGSSLSP*TCSCTP
Trigger: GGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGA...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGTCCTCCCAGCTTGACTaGCCTGTGAGCTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVSSQLD*PVSSCP
Trigger: CGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGA...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCTCGTCCTCCCTCTCCTaGCACTCGTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: QPISSLGGVSSREWHLSLSSSLS*HSSTST
Trigger: TGTGGATGTGGACGAGTGCAAGGAGAGGGAGGACGA...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGTCTTTGAAGAAATACTaGGCTTGGGAGGGCTCGATT +
Preference number: 5 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQSLKKY*AWEGSI
Trigger: AATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGA...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGATTGGCACAGAGGCCTaGGTTGAGCTCCTGCATTGT +
Preference number: 5 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQIGTEA*VELLHC
Trigger: ACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAAT...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TGGGTCCCTCTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGTTCAAGGCTGAAAGATaGCTTTGTGCTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: WVPLNILRGGFSAQLMPQFKAER*LCACLE
Trigger: CTCCAGACAAGCACAAAGCAATCTTTCAGCCTTGAA...CTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAGAGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCTCGGGGAACGGCTGCTaGGGGTCAGCTGTGGACATA +
Preference number: 5 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCSGNGC*GSAVDI
Trigger: TATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGA...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 90 bp GTAGTTTTGGATGTTGAAGTCTGGGTGGAGCACCACTCGGGCAGCTaGGCTGTTGACTGCCCCCGATTTGTCTCGCACATCATGCAAGCC +
Preference number: 5 (lower is better)
Translates to: VVLDVEVWVEHHSGS*AVDCPRFVSHIMQA
Trigger: GGCTTGCATGATGTGCGAGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCCGAGTGGTGCTCCACCCAGACTTCAACATCCAAAACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS TCA 90 bp TTTCTCCCTGAGAGTTCCTTTTCTGCTAGGGACTATGAGTGCATGTaGGCGGGTGTTGGGCTGCCACAAGGCAGGGAGAGGCGGGTTATG +
Preference number: 5 (lower is better)
Translates to: FLPESSFSARDYECM*AGVGLPQGRERRVM
Trigger: CATAACCCGCCTCTCCCTGCCTTGTGGCAGCCCAACACCCGCTCACATGCACTCATAGTCCCTAGCAGAAAAGGAACTCTCAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTTCCTCTCTCTCTCCTTaGACTTGCTCTTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVSSLSP*TCSCTP
Trigger: GGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGA...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR CAA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGTCCTCCCAGCTTGACTaGCCTGTGAGCTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKSSQLD*PVSSCP
Trigger: CGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGA...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGCCTCATTTTCCTGCCTaGGGTGCTCCCGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWPHFPA*GAPGCP
Trigger: CGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGG...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCGTCCTCCCTCTCCTaGCACTCGTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFSSSLS*HSSTST
Trigger: TGTGGATGTGGACGAGTGCAAGGAGAGGGAGGACGA...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATC +
Preference number: 5 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVRFSPE*SLWNRI
Trigger: GATCCTGTTCCATAGTGACAACTCGGGAGAGAACCG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGTTACAGGTGGGAATCTaGTTACTCCACGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQLQVGI*LLHVPS
Trigger: GGATGGGACGTGGAGTAACAAGATTCCCACCTGTAA...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGACCCCCAATGATCCTCTaGACCAGGCTTGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRPPMIL*TRLGRE
Trigger: CTCCCTGCCAAGCCTGGTCAAGAGGATCATTGGGGG...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCAGGACACCAGGCCTaGCACCACCCAGCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPGHQA*HHPALA
Trigger: AGCCAGCGCTGGGTGGTGCAAGGCCTGGTGTCCTGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTATTGGCACAGAGGCCTaGGTTGAGCTCCTGCATTGT +
Preference number: 5 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVIGTEA*VELLHC
Trigger: ACAATGCAGGAGCTCAACCAAGGCCTCTGTGCCAAT...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTCCTTATGCCAGCCTGTaGCTGACGGAGAACCAGAGA +
Preference number: 5 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIPYASL*LTENQR
Trigger: TCTCTGGTTCTCCGTCAGCAACAGGCTGGCATAAGG...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTTGTTTGATGAGCCGGTaGAGAAAGTGGACACTTCCC +
Preference number: 5 (lower is better)
Translates to: VLGAVSVGEATARSVCSICLMSR*RKWTLP
Trigger: GGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACA...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGGAGGCAGGCTGTGAATaGCTGTCCCTGAGTATTCAG +
Preference number: 5 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEEAGCE*LSLSIQ
Trigger: CTGAATACTCAGGGACAGCAATTCACAGCCTGCCTC...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp TTGGGATCATACTGGGGGTGGAGAGTGGTGTGTTTGACGCCGAGATaGTGTTCATTTTCATCTGACCGGAGCCTCCAATGCTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGSYWGWRVVCLTPR*CSFSSDRSLQCLPR
Trigger: CCTGGGCAAGCATTGGAGGCTCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp CAAAGAGGAGTTGGAGGCTTAGATGAGTCAGGAGAATGTTCTCAGTaGTTGCATGCCAGAGAGGCAGAGCCGATGGGCCCTCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: QRGVGGLDESGECSQ*LHAREAEPMGPPFS
Trigger: GGAGAAAGGAGGGCCCATCGGCTCTGCCTCTCTGGCATGCAAGCACTGAGAACATTCTCCTGACTCATCTAAGCCTCCAACTCCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 90 bp CGGTTCTCTCCCGAGTTGTCACTATGGAACAGGATCAGGACACTGTaGCTCTGGGTGCTGATGGGTTCTGGGGCTTTCTCTCCACAGAAA +
Preference number: 5 (lower is better)
Translates to: RFSPELSLWNRIRTL*LWVLMGSGAFSPQK
Trigger: TTTCTGTGGAGAGAAAGCCCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGGAGAGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
CDS CCA 90 bp CCCAGTCCAACCCTGAGGCCCCGAGAGTGTGAAACGGGAGTGGGATaGCTTAGCATGGATGGCTTACCTGTGTTATTGTTGAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: PSPTLRPRECETGVG*LSMDGLPVLLLSIL
Trigger: CAAGATGCTCAACAATAACACAGGTAAGCCATCCATGCTAAGCCATCCCACTCCCGTTTCACACTCTCGGGGCCTCAGGGTTGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAATCCTCCCAGCTTGACTaGCCTGTGAGCTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: DPLEGLYLGALEGIKSLESSQLD*PVSSCP
Trigger: CGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGA...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp TCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCCTCATTTTCCTGCCTaGGGTGCTCCCGGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: STAEIMLFSTHSNPHGKGPHFPA*GAPGCP
Trigger: CGGGCAGCCGGGAGCACCCAAGGCAGGAAAATGAGG...CCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGTCGTCCTCCCTCTCCTaGCACTCGTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVSSSLS*HSSTST
Trigger: TGTGGATGTGGACGAGTGCAAGGAGAGGGAGGACGA...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTTCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLISSNCR*TMKPSS
Trigger: GGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGA...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATATCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ESGNGCLGSAVDIGRKSISSNCR*TMKPSS
Trigger: GGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGA...TATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp CAGCCCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATC +
Preference number: 5 (lower is better)
Translates to: QPISSLGGVSSREWHLSLRFSPE*SLWNRI
Trigger: GATCCTGTTCCATAGTGACAACTCGGGAGAGAACCG...GAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATC +
Preference number: 5 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGRFSPE*SLWNRI
Trigger: GATCCTGTTCCATAGTGACAACTCGGGAGAGAACCG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTGAACATCCTGCGGGGTGGATTCTCCGCCCAGCTCATGCCCCAGGGATGCCAGTATTTGATCTCAGACTaGTATGTGGTGAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LNILRGGFSAQLMPQGCQYLISD*YVVRLF
Trigger: GAACAACCTCACCACATACAAGTCTGAGATCAAATA...CTGGCATCCCTGGGGCATGAGCTGGGCGGAGAATCCACCCCGCAGGATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GCTCTGAGTGCTCCAGCTAGAAGGAACCTGCAGGGGACCTTATGCCAGCCTGTTCCACTCCCAAACCACTaGTCATTTGGCACTCTCGAA +
Preference number: 5 (lower is better)
Translates to: ALSAPARRNLQGTLCQPVPLPNH*SFGTLE
Trigger: TTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGG...AACAGGCTGGCATAAGGTCCCCTGCAGGTTCCTTCTAGCTGGAGCACTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTAACGGTGACATGCTCCTaGGAGACTGGTATCACCGTG +
Preference number: 5 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLTVTCS*ETGITV
Trigger: CACGGTGATACCAGTCTCCAAGGAGCATGTCACCGT...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGAGACTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTACTAAGAGAGAGGGGCTaGGCTATGAGCCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: RDLDKLRNTGLLPGAFSLLRERG*AMSHLP
Trigger: TGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAG...TAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTTGTTTGATGAGCCGGTaGAGAAAGTGGACACTTCCC +
Preference number: 5 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVCLMSR*RKWTLP
Trigger: GGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACA...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGAGCTTCCGGGAGAACTaGGGGAGCCCACACACTGGA +
Preference number: 5 (lower is better)
Translates to: SLDSACVLTTLLLHLFKESFREN*GSPHTG
Trigger: TCCAGTGTGTGGGCTCCCCAAGTTCTCCCGGAAGCT...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGTGGGCTGGGCGTCCATaGAAGATCCTGGCCATCAGC +
Preference number: 5 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKWAGRP*KILAIS
Trigger: GCTGATGGCCAGGATCTTCAATGGACGCCCAGCCCA...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 90 bp GTAGTGGGCATCAAAGCCTGTGAAACGCTCCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACATGAAGGAGCCAGGGGAGAGGACCAC +
Preference number: 5 (lower is better)
Translates to: VVGIKACETLLIGEI*PESDGHEGARGEDH
Trigger: GTGGTCCTCTCCCCTGGCTCCTTCATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCACAGGCTTTGATGCCCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000392475.2
ENST00000460839.5
ENST00000465015.1
ENST00000490558.5
CDS GCA 90 bp TCAACAATCGGGATTTCAATCTCCATCAGGGTCTCTGGGAACCTTTaGAAGAACTGCTTCCCCCAGCCGCTGACGATGACCATGGCTCCT +
Preference number: 5 (lower is better)
Translates to: STIGISISIRVSGNL*KNCFPQPLTMTMAP
Trigger: AGGAGCCATGGTCATCGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACCCTGATGGAGATTGAAATCCCGATTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp CCCTGGTCACTTTCTTCTTCAGCGGGGCATAAGCCTTCTGGCAGGTaGTGTGGTCAACAATCGGGATTTCAATCTCCATCAGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PWSLSSSAGHKPSGR*CGQQSGFQSPSGSL
Trigger: CAGAGACCCTGATGGAGATTGAAATCCCGATTGTTGACCACAGCACCTGCCAGAAGGCTTATGCCCCGCTGAAGAAGAAAGTGACCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp GGCAGTGGGAGAAATCTGAGCTTCAGCAGCGTCCGGAGCAGGATTTaGACGAAGTCTCCCGTTTCAAGTTTTATGTCTCCTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GSGRNLSFSSVRSRI*TKSPVSSFMSPGVL
Trigger: CAGGACTCCAGGAGACATAAAACTTGAAACGGGAGACTTCGTGCAAATCCTGCTCCGGACGCTGCTGAAGCTCAGATTTCTCCCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CCA 90 bp CAGCTCGATGGTATACAGGCATTCAGAGCTCTTGGGGTAAGGGTTTaGGAAGTCAGGGCTGGTGATCACCCCAGTCCTTTGAGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: QLDGIQAFRALGVRV*EVRAGDHPSPLSEE
Trigger: CTCTTCACTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCCCAAACCCTTACCCCAAGAGCTCTGAATGCCTGTATACCATCGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS CCA 90 bp GTGTCACAGCTGACGAGCACTTGGTCTTTGAAGAAATACTTGGCTTaGGAGGGCTCGATTTTCCCATGGACAGGAGGCTGTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VSQLTSTWSLKKYLA*EGSIFPWTGGCSSG
Trigger: CCCAGAGCTACAGCCTCCTGTCCATGGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000483719.1
CDS CCA 90 bp CCCAGGGGTCTTGGGAGTGATCCATTTCTGGATGTCTGCATTGTGTaGGGTCCCGTCATTCACTCTGTCACTTGCTCTGACTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: PRGLGSDPFLDVCIV*GPVIHSVTCSDLSS
Trigger: CGAACTCAAGTCAGAGCAAGTGACAGAGTGAATGACGGGACCCCACACAATGCAGACATCCAGAAATGGATCACTCCCAAGACCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp TGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGTCTCTCTCCTTTGACTaGCTCTTGCACTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: CSAPILIHMERGTGVLWVSLSFD*LLHSQE
Trigger: TTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGA...CACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTTCTCTCTCCTTTGACTaGCTCTTGCACTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLISLSFD*LLHSQE
Trigger: TTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGA...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS-3UTR CAA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTGTGAAACGCTCCTCATaGGAGAAATCTGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVVKRSS*EKSDRK
Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCAC...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGGTGGGGACGAGCACTTGGTCTTaGAAGAAATACTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SAPILIHMERGTGVLWVGTSTWS*KKYLAW
Trigger: CCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGT...CCCCACCCACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGACGAGCACTTGGTCTTaGAAGAAATACTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQTSTWS*KKYLAW
Trigger: CCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGT...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGCAGCCCATCTCTTCTTaGGGTGGTGTCTCTAGCCGA +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLQPISS*GGVSSR
Trigger: TCGGCTAGAGACACCACCCAAAGAAGAGATGGGCTG...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGTTGTATGTGGTGAGGTaGTTCCTTGTAGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQLYVVR*FLVEKV
Trigger: CACCTTCTCTACAAGGAACAACCTCACCACATACAA...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCATTGACTGCCCCCGATTaGTCTCGCACATCATGCAAG +
Preference number: 5 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPLTAPD*SRTSCK
Trigger: CTTGCATGATGTGCGAGACAAATCGGGGGCAGTCAA...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCGCACAGAGGCCTTGGTaGAGCTCCTGCATTGTATTA +
Preference number: 5 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGAQRPW*SSCIVL
Trigger: TAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGC...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGAACCCAGGACTCCTGGCTCTTTTCACTGCCTGCCATGGGTGAGCCTCTGATTGCACAGAGGCCTTGGTaGAGCTCCTGCATTGTATTA +
Preference number: 5 (lower is better)
Translates to: RTQDSWLFSLPAMGEPLIAQRPW*SSCIVL
Trigger: TAATACAATGCAGGAGCTCAACCAAGGCCTCTGTGC...AATCAGAGGCTCACCCATGGCAGGCAGTGAAAAGAGCCAGGAGTCCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTCCTGGGGGCTGTCTCGGTAGGAGAAGCCACCGCTAGGTCAGTGTGTTCCATTTTCAAGGCTGAAAGATaGCTTTGTGCTTGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VLGAVSVGEATARSVCSIFKAER*LCACLE
Trigger: CTCCAGACAAGCACAAAGCAATCTTTCAGCCTTGAA...AATGGAACACACTGACCTAGCGGTGGCTTCTCCTACCGAGACAGCCCCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGACGGAGCCTCCAATGCTaGCCCAGGATGATTTTGAAG +
Preference number: 5 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGRSLQC*PRMILK
Trigger: CTTCAAAATCATCCTGGGCAAGCATTGGAGGCTCCG...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GGAGTCGGGGAACGGCTGCTTGGGGTCAGCTGTGGACATAGGAAGGAAGAGTATATAAGGAAGGATCCTTaGGCTCACACTTTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: GVGERLLGVSCGHRKEEYIRKDP*AHTLPV
Trigger: GACAGGCAAAGTGTGAGCCAAAGGATCCTTCCTTAT...ATACTCTTCCTTCCTATGTCCACAGCTGACCCCAAGCAGCCGTTCCCCGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 90 bp AGCTCCACCAGAGCCACGTCATTCTCGAATGTGTTGGGATCATACTaGGGGTGGAGAGTGGTGTGTTTGACGCCGAGATGCTGTTCATTT +
Preference number: 5 (lower is better)
Translates to: SSTRATSFSNVLGSY*GWRVVCLTPRCCSF
Trigger: AAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAATGACGTGGCTCTGGTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 90 bp CACAATTCCAGAAAGCAATGTTATAATGCCTCTGAAGGGCACCCCTaGGGTGTGCAGTGTACAGCCTGTGAAGCTACCCATGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: HNSRKQCYNASEGHP*GVQCTACEATHGPA
Trigger: AGCAGGACCATGGGTAGCTTCACAGGCTGTACACTGCACACCCCAGGGGTGCCCTTCAGAGGCATTATAACATTGCTTTCTGGAATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAACCCTGCCACAGAAGGTaGCCAGCACCTGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEPCHRR*PAPGPQ
Trigger: CTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGG...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGTCGTCCTCCCTCTCCTaGCACTCGTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWSSSLS*HSSTST
Trigger: TGTGGATGTGGACGAGTGCAAGGAGAGGGAGGACGA...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSCCSAPILIHMERGTGVSSNCR*TMKPSS
Trigger: GGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGA...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCGAAGAAATACTTGGCTaGGGAGGGCTCGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTEEILG*GGLDFP
Trigger: GGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTC...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCGAAGAAATACTTGGCTaGGGAGGGCTCGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCEEILG*GGLDFP
Trigger: GGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTC...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTACGAGCACTTGGTCTTaGAAGAAATACTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVTSTWS*KKYLAW
Trigger: CCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGGTCACTTGCTCTGACTaGAGTTCGCTCTCCAGATCG +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLVTCSD*SSLSRS
Trigger: CGATCTGGAGAGCGAACTCAAGTCAGAGCAAGTGAC...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTTCTGGATGTCTGCATaGTGTGGGGTCCCGTCATTC +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLFWMSA*CGVPSF
Trigger: GAATGACGGGACCCCACACAATGCAGACATCCAGAA...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGTTCTGGATGTCTGCATaGTGTGGGGTCCCGTCATTC +
Preference number: 5 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVFWMSA*CGVPSF
Trigger: GAATGACGGGACCCCACACAATGCAGACATCCAGAA...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCCCCAATGATCCTCTaGACCAGGCTTGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFPPMIL*TRLGRE
Trigger: CTCCCTGCCAAGCCTGGTCAAGAGGATCATTGGGGG...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCTCTGGCCAAACCACTTGTCATTaGGCACTCTCGAAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PVEKVDTSQSFPLRGFSGQTTCH*ALSKCP
Trigger: AGGACACTTCGAGAGTGCCAAATGACAAGTGGTTTG...GCCAGAGAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GACGCCCATGGTGTCAGCTGGTGTTCCAGGGTGGCATATGGGCCCAAATGTGTTATCGTGGTTGTAGTTTaGGATGTTGAAGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: DAHGVSWCSRVAYGPKCVIVVVV*DVEVWV
Trigger: CACCCAGACTTCAACATCCAAAACTACAACCACGAT...AACACATTTGGGCCCATATGCCACCCTGGAACACCAGCTGACACCATGGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAATGTGGAGTGTGCTGTCGGAAGTGCGGTGTAGCTTCGCTCAGGGGAGGCAGGAGCCTCTGATTCCTTaGACTCTGAAAAATGAAGGA +
Preference number: 5 (lower is better)
Translates to: VMWSVLSEVRCSFAQGRQEPLIP*TLKNEG
Trigger: TCCTTCATTTTTCAGAGTCAAAGGAATCAGAGGCTC...CTGCCTCCCCTGAGCGAAGCTACACCGCACTTCCGACAGCACACTCCACATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGGGTCTCTGGGAACCTTaGCAAGAACTGCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEGLWEP*QELLPP
Trigger: TGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACC...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AGCCTGGATTCGGCCTGTGTTCTGACCACTCTCTTGCTCCATCTCTTTAAAGAGCCTTTGGCTCACACTTaGCCTGTCCCATGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SLDSACVLTTLLLHLFKEPLAHT*PVPCPW
Trigger: CCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGG...CTCTTTAAAGAGATGGAGCAAGAGAGTGGTCAGAACACAGGCCGAATCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGAAAACACTTATGGCCTaGCAAGATGAGGGAGTTCAG +
Preference number: 5 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEKTLMA*QDEGVQ
Trigger: CTGAACTCCCTCATCTTGCAAGGCCATAAGTGTTTT...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAACAGAAGACAGGAACTaGGAGCTTCTGATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGTEDRN*ELLIPW
Trigger: CCAAGGGATCAGAAGCTCCAAGTTCCTGTCTTCTGT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCGCCAGAAGTCAGTATTaGTGCACAAACCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTAARSQY*CTNLEA
Trigger: GGCCTCAAGGTTTGTGCACAAATACTGACTTCTGGC...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 90 bp TCTCGAATGTGTTGGGATCATACTGGGGGTGGAGAGTGGTGTGTTTaGCGCCGAGATGCTGTTCATTTTCATCTGACCGGAGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SRMCWDHTGGGEWCV*RRDAVHFHLTGASN
Trigger: ATTGGAGGCTCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 90 bp GATTTTCCAGCATCTCCAGGACAAGTGTTCATTGCAGGCTCACCTTaGTGTAGTCATAGGGGCAGGGCACCTCAGGATGGTCCTCAATGT +
Preference number: 5 (lower is better)
Translates to: DFPASPGQVFIAGSP*CSHRGRAPQDGPQC
Trigger: ACATTGAGGACCATCCTGAGGTGCCCTGCCCCTATGACTACATCAAGGTGAGCCTGCAATGAACACTTGTCCTGGAGATGCTGGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460839.5
CDS GCA 90 bp CAGGGCACCTCAGGATGGTCCTCAATGTCAAATATGTCCTCAAACTaGAGGTTGACCATGAAACCCTCCTCCAGCTCGATGGTATACAGG +
Preference number: 5 (lower is better)
Translates to: QGTSGWSSMSNMSSN*RLTMKPSSSSMVYR
Trigger: CCTGTATACCATCGAGCTGGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGACATATTTGACATTGAGGACCATCCTGAGGTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS-3UTR CAA 90 bp CCAAGGGATCACACTAAGAGAGAGGGGCTTGGCTATGAGCCATCTCCCAAAACCATCTGGCCAAACATATaGTTTAGCTCCACGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PRDHTKREGLGYEPSPKTIWPNI*FSSTVW
Trigger: CCACACCGTGGAGCTAAACAATATGTTTGGCCAGAT...GGTTTTGGGAGATGGCTCATAGCCAAGCCCCTCTCTCTTAGTGTGATCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296280.11
CDS-3UTR CAA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGCCCTGCCACAGAAGGTaGCCAGCACCTGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLPCHRR*PAPGPQ
Trigger: CTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGG...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGGATCACCCCAGTCCTTaGAGTGAAGAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLDHPSP*SEEVVT
Trigger: AGTGACAACCTCTTCACTCAAAGGACTGGGGTGATC...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAGATCACCCCAGTCCTTaGAGTGAAGAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRDHPSP*SEEVVT
Trigger: AGTGACAACCTCTTCACTCAAAGGACTGGGGTGATC...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CAGATGGAGATGGTCAAGGTTGAGGGGAGAGGTGTGTCACTGATCAATGCTAAGCGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATC +
Preference number: 5 (lower is better)
Translates to: QMEMVKVEGRGVSLINAKRFSPE*SLWNRI
Trigger: GATCCTGTTCCATAGTGACAACTCGGGAGAGAACCG...CTTAGCATTGATCAGTGACACACCTCTCCCCTCAACCTTGACCATCTCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGGAAGAAATACTTGGCTaGGGAGGGCTCGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLEEILG*GGLDFP
Trigger: GGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTC...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp CTTGGACAAGCTCAGGAACACAGGTCTCCTGCCTGGAGCCTTTTCCCTATACCAGACAAAGGAGTGTGTTaGATGAGCCGGTTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: LGQAQEHRSPAWSLFPIPDKGVC*MSRLRK
Trigger: CTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC...TGGTATAGGGAAAAGGCTCCAGGCAGGAGACCTGTGTTCCTGAGCTTGTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCGGAAGATATGGTGTCTaGGGATGCCTTGGGATGATT +
Preference number: 5 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTAGRYGV*GCLGMI
Trigger: AATCATCCCAAGGCATCCCAAGACACCATATCTTCC...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 90 bp CTTGATCCGAAACCCATCTGGGACAGTGATATTCCAAGTCACCTCTaGATCACTGGGATAGGAGTCTGGATAACCAGGCGACTGGATCTG +
Preference number: 5 (lower is better)
Translates to: LDPKPIWDSDIPSHL*ITGIGVWITRRLDL
Trigger: CAGATCCAGTCGCCTGGTTATCCAGACTCCTATCCCAGTGATTCAGAGGTGACTTGGAATATCACTGTCCCAGATGGGTTTCGGATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392475.2
ENST00000425937.1
ENST00000439271.1
ENST00000460839.5
CDS TCA 90 bp GTGGAGAGTGGTGTGTTTGACGCCGAGATGCTGTTCATTTTCATCTaGCCGGAGCCTCCAATGCTTGCCCAGGATGATTTTGAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: VESGVFDAEMLFIFI*PEPPMLAQDDFEVR
Trigger: TCTGACTTCAAAATCATCCTGGGCAAGCATTGGAGGCTCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 90 bp ACCAGAGCCACGTCATTCTCGAATGTGTTGGGATCATACTGGGGGTaGAGAGTGGTGTGTTTGACGCCGAGATGCTGTTCATTTTCATCT +
Preference number: 5 (lower is better)
Translates to: TRATSFSNVLGSYWG*RVVCLTPRCCSFSS
Trigger: AGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAATGACGTGGCTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACTCCTCTCTCTCTCCTTaGACTTGCTCTTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHSSLSP*TCSCTP
Trigger: GGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGA...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAATCCTCCCAGCTTGACTaGCCTGTGAGCTCGTGCCCG +
Preference number: 5 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKSSQLD*PVSSCP
Trigger: CGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGA...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGATCTGGCCAAACATATaGTTTAGCTCCACGGTGTGG +
Preference number: 5 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVIWPNI*FSSTVW
Trigger: CCACACCGTGGAGCTAAACAATATGTTTGGCCAGAT...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGGTGAAACGCTCCTCATaGGAGAAATCTGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLVKRSS*EKSDRK
Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCAC...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp ATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTGGTGAAACGCTCCTCATaGGAGAAATCTGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: MLFSTHSNPHGKGHGGVVVKRSS*EKSDRK
Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCAC...CACAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GAATGCTCTTCTCCTAGAGGAAGGATTAGGCCAAGGCTAGTCCCAGAAGGCAGAGTGAAACGCTCCTCATaGGAGAAATCTGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: ECSSPRGRIRPRLVPEGRVKRSS*EKSDRK
Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCAC...TCTGCCTTCTGGGACTAGCCTTGGCCTAATCCTTCCTCTAGGAGAAGAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTGGGTTTCTTGGACCTTAGCAGCAGTGCAGGAGCTGGCACAGCTAATAAGTGCACGAGCACTTGGTCTTaGAAGAAATACTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LGFLDLSSSAGAGTANKCTSTWS*KKYLAW
Trigger: CCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGT...GCACTTATTAGCTGTGCCAGCTCCTGCACTGCTGCTAAGGTCCAAGAAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp TTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGACTGCCCAGGGTTGTATATTAAATCTTTaGTCTCAAGGACCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGGVSSREWHLSLQTAQGCILNL*SQGPRA
Trigger: TGCCCTTGGTCCTTGAGACAAAAGATTTAATATACA...ACCCTGGGCAGTCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp GGAAAGGAGAAATGGCTGCTTTCATCGGAGGATCGTCCTCTGCTACTGACTGCCTTGTATGTGGTGAGGTaGTTCCTTGTAGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GKEKWLLSSEDRPLLLTALYVVR*FLVEKV
Trigger: CACCTTCTCTACAAGGAACAACCTCACCACATACAA...GGCAGTCAGTAGCAGAGGACGATCCTCCGATGAAAGCAGCCATTTCTCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp CACTTATGGCCTTGCAAGATGAGGGAGTTCAGGGTGAGGCTCAGGGGTGAGGAGTATTTGATCTCAGACTaGTATGTGGTGAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: HLWPCKMREFRVRLRGEEYLISD*YVVRLF
Trigger: GAACAACCTCACCACATACAAGTCTGAGATCAAATA...CTCCTCACCCCTGAGCCTCACCCTGAACTCCCTCATCTTGCAAGGCCATAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGGACAGGGAAAGAGACTaGGACAAGCTCAGGAACACA +
Preference number: 5 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKDRERD*DKLRNT
Trigger: TGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTGTC...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAAGGCCACTGGGGTAAGAAGATTGCTTTGTGCTaGTCTGGAGCAGCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: RTDGFDKWSGVNKGHWGKKIALC*SGAAGV
Trigger: CACACCTGCTGCTCCAGACAAGCACAAAGCAATCTT...CTTACCCCAGTGGCCTTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGGGAGCTTCTGATCCCTaGGAGGGCTTATATCTTGGA +
Preference number: 5 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLGASDP*EGLYLG
Trigger: TCCAAGATATAAGCCCTCCAAGGGATCAGAAGCTCC...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AGGAAGGATCCTTTGGCTCACACTTTGCCTGTCCCATGTCCTTGGGAACCCACCGAGCAACAGCTTCTGTaGTTAATAAAATCCGGGCAT +
Preference number: 5 (lower is better)
Translates to: RKDPLAHTLPVPCPWEPTEQQLL*LIKSGH
Trigger: ATGCCCGGATTTTATTAACAACAGAAGCTGTTGCTC...GGTGGGTTCCCAAGGACATGGGACAGGCAAAGTGTGAGCCAAAGGATCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp CCTCTGGCTTTTCCTCTCTCCTCTCTCTCTCCTTTGACTTGCTCTTaGACTCCCAGGAACCTGACAACAAAATCTGTCTTCCTACCGAAA +
Preference number: 5 (lower is better)
Translates to: PLAFPLSSLSPLTCS*TPRNLTTKSVFLPK
Trigger: TTTCGGTAGGAAGACAGATTTTGTTGTCAGGTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGAGAGAGGAAAAGCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392472.6
ENST00000392475.2
ENST00000439271.1
CDS GCA 90 bp TCTCTCCCTCTGGCTTTTCCTCTCTCCTCTCTCTCTCCTTTGACTTaGTCTTGCACTCCCAGGAACCTGACAACAAAATCTGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SLPLAFPLSSLSPLT*SCTPRNLTTKSVFL
Trigger: TAGGAAGACAGATTTTGTTGTCAGGTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGAGAGAGGAAAAGCCAGAGGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392472.6
ENST00000392475.2
ENST00000439271.1
CDS-3UTR CAA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHSSNCR*TMKPSS
Trigger: GGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGA...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGAAGAAATACTTGGCTaGGGAGGGCTCGATTTTCCC +
Preference number: 5 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHEEILG*GGLDFP
Trigger: GGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTC...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp TCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGTTGTCTTTGAAGAAATACTaGGCTTGGGAGGGCTCGATT +
Preference number: 5 (lower is better)
Translates to: SCCSAPILIHMERGTGVLSLKKY*AWEGSI
Trigger: AATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGA...CAACACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp CCATCTCTTCTTTGGGTGGTGTCTCTAGCCGAGAATGGCACCTCAGTCTCCAGAACAGCTGACGAGCACTaGGTCTTTGAAGAAATACTT +
Preference number: 5 (lower is better)
Translates to: PSLLWVVSLAENGTSVSRTADEH*VFEEIL
Trigger: AAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGT...TCTGGAGACTGAGGTGCCATTCTCGGCTAGAGACACCACCCAAAGAAGAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCACAGCTGACGAGCACTaGGTCTTTGAAGAAATACTT +
Preference number: 5 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFTADEH*VFEEIL
Trigger: AAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGT...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCCCTCTCAGGGGCTTCATTCATCCAGACTCCTaGGGCAGAACAGGTATATAT +
Preference number: 5 (lower is better)
Translates to: DEPVEKVDTSQSFPLRGFIHPDS*GRTGIY
Trigger: ATATATACCTGTTCTGCCCAAGGAGTCTGGATGAAT...GAAGCCCCTGAGAGGGAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGTGGGAATTTAAGGGCTaGGTGGGCCTCCCACGGCTA +
Preference number: 5 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLWEFKG*VGLPRL
Trigger: TAGCCGTGGGAGGCCCACCAAGCCCTTAAATTCCCA...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAAGGGTTTATTTCCACTaGAGACCCCTGATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LFPLETPDGSNNAEALYRRVYFH*RPLMGA
Trigger: TGCTCCCATCAGGGGTCTCAAGTGGAAATAAACCCT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAATTGCCCAGGATGATTTaGAAGTCAGAAGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DPLEGLYLGALEGIKSLELPRMI*KSEGLS
Trigger: GCTCAGCCCTTCTGACTTCAAAATCATCCTGGGCAA...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAGGGAAAATGGCTTCATaGTATCTTAGATCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGGKMAS*YLRSSE
Trigger: CTCTGACGATCTAAGATACAATGAAGCCATTTTCCC...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATGGAGCTGGGTCCCATaGCCACCTTCCCCTTACAGA +
Preference number: 5 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTWSWVP*PPSPYR
Trigger: TCTGTAAGGGGAAGGTGGCAATGGGACCCAGCTCCA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGATCTGGCCAAACATATaGTTTAGCTCCACGGTGTGG +
Preference number: 5 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWIWPNI*FSSTVW
Trigger: CCACACCGTGGAGCTAAACAATATGTTTGGCCAGAT...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACATCTGGCCAAACATATaGTTTAGCTCCACGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHIWPNI*FSSTVW
Trigger: CCACACCGTGGAGCTAAACAATATGTTTGGCCAGAT...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGGTGAAACGCTCCTCATaGGAGAAATCTGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWVKRSS*EKSDRK
Trigger: TTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCAC...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGTCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASTAEIMLFSTHSNPHGKSSNCR*TMKPSS
Trigger: GGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGA...CTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAACGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATC +
Preference number: 5 (lower is better)
Translates to: QLQLLRSCCSAPILIHMERFSPE*SLWNRI
Trigger: GATCCTGTTCCATAGTGACAACTCGGGAGAGAACCG...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp ACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCGCCACGAGCACTTGGTCTTaGAAGAAATACTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: TCKPQKTEPLMMTFQPCATSTWS*KKYLAW
Trigger: CCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGT...GGCGCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp AGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACGGGGGTGACAGCTGACGAGCACTaGGTCTTTGAAGAAATACTT +
Preference number: 5 (lower is better)
Translates to: RSCCSAPILIHMERGTGVTADEH*VFEEIL
Trigger: AAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGT...CACCCCCGTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS CCA 90 bp TTATGGTACTACTGTGTGGTCAACTCACCTGCCCAGTGTCAATTTTaGGTAGGGGAAGGTCTACTGAGGTTTAAGCAGACTCCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: LWYYCVVNSPAQCQF*VGEGLLRFKQTPVF
Trigger: AAAGACTGGAGTCTGCTTAAACCTCAGTAGACCTTCCCCTACCCAAAATTGACACTGGGCAGGTGAGTTGACCACACAGTAGTACCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 90 bp AGAGAAGAAGTGAGACCCCTCAACTGCCTTTTGCTCATCCTCCTTTaGCTATCTGATGGATCTATCTCATGCAGATGTACAGGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: REEVRPLNCLLLILL*LSDGSISCRCTGCA
Trigger: TGCACAACCTGTACATCTGCATGAGATAGATCCATCAGATAGCCAAAGGAGGATGAGCAAAAGGCAGTTGAGGGGTCTCACTTCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAGATCACCCCAGTCCTTaGAGTGAAGAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: QLQLLRSCCSAPILIHMEDHPSP*SEEVVT
Trigger: AGTGACAACCTCTTCACTCAAAGGACTGGGGTGATC...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGACAGCTGACGAGCACTaGGTCTTTGAAGAAATACTT +
Preference number: 5 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLTADEH*VFEEIL
Trigger: AAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGT...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAATTACAGGTGGGAATCTaGTTACTCCACGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: QLQLLRSCCSAPILIHMELQVGI*LLHVPS
Trigger: GGATGGGACGTGGAGTAACAAGATTCCCACCTGTAA...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGTGGGAATTTAAGGGCTaGGTGGGCCTCCCACGGCTA +
Preference number: 5 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKWEFKG*VGLPRL
Trigger: TAGCCGTGGGAGGCCCACCAAGCCCTTAAATTCCCA...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGTTATACCAACAGTAGGACCGATGGGTTTGATAAGTGGTCAGGAGTGAATAAACCTTATGCCAGCCTGTaGCTGACGGAGAACCAGAGA +
Preference number: 5 (lower is better)
Translates to: SYTNSRTDGFDKWSGVNKPYASL*LTENQR
Trigger: TCTCTGGTTCTCCGTCAGCAACAGGCTGGCATAAGG...TTTATTCACTCCTGACCACTTATCAAACCCATCGGTCCTACTGTTGGTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATGACAAAGGAGTGTGTTaGATGAGCCGGTTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHDKGVC*MSRLRK
Trigger: CTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACTGGAGAGTGGTGTGTTaGACGCCGAGATGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDWRVVC*TPRCCS
Trigger: TGAACAGCATCTCGGCGTCAAACACACCACTCTCCA...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGATGGAGATGGTCAAGGTaGAGGGGAGAGGTGTGTCAC +
Preference number: 5 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGWRWSR*RGEVCH
Trigger: GTGACACACCTCTCCCCTCAACCTTGACCATCTCCA...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GATCCCTTGGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGATGGGAGAGGCATTTaGCTTGGAAAACACTTATGG +
Preference number: 5 (lower is better)
Translates to: DPLEGLYLGALEGIKSLEDGRGI*LGKHLW
Trigger: CCATAAGTGTTTTCCAAGCAAAATGCCTCTCCCATC...TTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCCAAGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GTGCCCAGGCAGTGCTTGAAATGGGAAGATATGGTGTCTTGGGATGCCTTGGGAAGTTCTTCTTTGGCATaGAAAATGGAGTTTCTGCTA +
Preference number: 5 (lower is better)
Translates to: VPRQCLKWEDMVSWDALGSSSLA*KMEFLL
Trigger: TAGCAGAAACTCCATTTTCAATGCCAAAGAAGAACT...TCCCAAGGCATCCCAAGACACCATATCTTCCCATTTCAAGCACTGCCTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GGAGGGCTTATATCTTGGAGCTCTGGAGGGCATAAAGTCTCTAGAAGCTTCCTGTTTCCAAAGCAGCACTaGGCAGGGTTTGTTCTATTA +
Preference number: 5 (lower is better)
Translates to: GGLISWSSGGHKVSRSFLFPKQH*AGFVLL
Trigger: TAATAGAACAAACCCTGCCAAGTGCTGCTTTGGAAA...CAGGAAGCTTCTAGAGACTTTATGCCCTCCAGAGCTCCAAGATATAAGCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATTTCTGGGAAGCCTTCTaGATTGATATCTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNFWEAF*IDISSP
Trigger: GGGGGAGGAGATATCAATCAAGAAGGCTTCCCAGAA...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp TCCCAGAAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAGAGATCTGGGTTTCTaGGACCTTAGCAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SQKKSPLDMCFCGRSWYNRDLGF*DLSSSA
Trigger: TGCACTGCTGCTAAGGTCCAAGAAACCCAGATCTCT...ATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp CAGCTTCAACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAACGGAAAAATCAGCCTaGTGGGTGAACAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: QLQLLRSCCSAPILIHMETEKSA*WVNRRR
Trigger: TCTCCTCCTGTTCACCCACAAGGCTGATTTTTCCGT...TTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGTTGAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392470.6
CDS CCA 90 bp CAGGTGGGTAGGCTTCTCCCCAATACTTTATTCATCCAGACTCCTTaGGCAGAACAGGTATATATACCTGGATTAGTGAAAGAGGTTAGG +
Preference number: 5 (lower is better)
Translates to: QVGRLLPNTLFIQTP*AEQVYIPGLVKEVR
Trigger: CCTAACCTCTTTCACTAATCCAGGTATATATACCTGTTCTGCCCAAGGAGTCTGGATGAATAAAGTATTGGGGAGAAGCCTACCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGGATCACCCCAGTCCTTaGAGTGAAGAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLDHPSP*SEEVVT
Trigger: AGTGACAACCTCTTCACTCAAAGGACTGGGGTGATC...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACGATCACCCCAGTCCTTaGAGTGAAGAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDDHPSP*SEEVVT
Trigger: AGTGACAACCTCTTCACTCAAAGGACTGGGGTGATC...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GACAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCTTTGAAGAAATACTaGGCTTGGGAGGGCTCGATT +
Preference number: 5 (lower is better)
Translates to: DKGVCLMSRLRKWTLPNHSLKKY*AWEGSI
Trigger: AATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGA...ATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATTACAGGTGGGAATCTaGTTACTCCACGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTLQVGI*LLHVPS
Trigger: GGATGGGACGTGGAGTAACAAGATTCCCACCTGTAA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp ACTGCTGAGATCATGTTGTTCAGCACCCATTCTAATCCACATGGAAAGGGGCACACTGCTGAGATCATGTaGTTCAGCACCCATTCTAAT +
Preference number: 5 (lower is better)
Translates to: TAEIMLFSTHSNPHGKGHTAEIM*FSTHSN
Trigger: ATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT...GTGCCCCTTTCCATGTGGATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS-3UTR CAA 90 bp TTATTTCCACTTGAGACCCCTGATGGGAGCAACAATGCAGAGGCCCTTTACAGAATTCATCCAGACTCCTaGGGCAGAACAGGTATATAT +
Preference number: 5 (lower is better)
Translates to: LFPLETPDGSNNAEALYRIHPDS*GRTGIY
Trigger: ATATATACCTGTTCTGCCCAAGGAGTCTGGATGAAT...TCTGTAAAGGGCCTCTGCATTGTTGCTCCCATCAGGGGTCTCAAGTGGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CAAAGGAGTGTGTTTGATGAGCCGGTTGAGAAAGTGGACACTTCCCAATCATTCATCGTGGTTGTAGTTTaGGATGTTGAAGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: QRSVFDEPVEKVDTSQSFIVVVV*DVEVWV
Trigger: CACCCAGACTTCAACATCCAAAACTACAACCACGAT...GAATGATTGGGAAGTGTCCACTTTCTCAACCGGCTCATCAAACACACTCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGAAGATTGCTTTGTGCTaGTCTGGAGCAGCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLKIALC*SGAAGV
Trigger: CACACCTGCTGCTCCAGACAAGCACAAAGCAATCTT...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GAAGTTAGACAAGGTTGTTGTCCTCACAGATACTCCAGCCCTCTGCTTCTATGGAGTGGACATTTACTATaGTTCTCCCTCCATGTGGAA +
Preference number: 5 (lower is better)
Translates to: EVRQGCCPHRYSSPLLLWSGHLL*FSLHVE
Trigger: TTCCACATGGAGGGAGAACAATAGTAAATGTCCACT...CCATAGAAGCAGAGGGCTGGAGTATCTGTGAGGACAACAACCTTGTCTAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 90 bp TTAAGGATCTGTTTTCCAGTTAAATGGCCTATTCTAGGTACTAGCTaGCCAATGGTGGACATCAACTGTCAGAATTTCCAGAGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LRICFPVKWPILGTS*PMVDINCQNFQSPG
Trigger: ACCAGGGCTCTGGAAATTCTGACAGTTGATGTCCACCATTGGCCAGCTAGTACCTAGAATAGGCCATTTAACTGGAAAACAGATCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS-3UTR CAA 90 bp AGAACTTGTAAGCCCCAGAAGACAGAACCTCTAATGATGACATTTCAGCCCTGCACTGCTGAGATCATGTaGTTCAGCACCCATTCTAAT +
Preference number: 5 (lower is better)
Translates to: RTCKPQKTEPLMMTFQPCTAEIM*FSTHSN
Trigger: ATTAGAATGGGTGCTGAACAACATGATCTCAGCAGT...GCAGGGCTGAAATGTCATCATTAGAGGTTCTGTCTTCTGGGGCTTACAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGTTGACTGCCCCCGATTaGTCTCGCACATCATGCAAG +
Preference number: 5 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKLTAPD*SRTSCK
Trigger: CTTGCATGATGTGCGAGACAAATCGGGGGCAGTCAA...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS TCA 90 bp TCAAACTCCCTTTGCAACATGAAGGATCTTTCTAAAATGGGAATGTaGCCATGTCCTTTCTCAGCTCAGAATCACGAATGGCTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SNSLCNMKDLSKMGM*PCPFSAQNHEWLAV
Trigger: GACAGCAAGCCATTCGTGATTCTGAGCTGAGAAAGGACATGGTCACATTCCCATTTTAGAAAGATCCTTCATGTTGCAAAGGGAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 90 bp ATTCTTCTGAATAAGCTAGAATTGGTGTTTGGGTCCTGGTGTCTCTaGAGTGGGAGAATTCCACCGGAGACTACAATTGAAATTCATGAG +
Preference number: 5 (lower is better)
Translates to: ILLNKLELVFGSWCL*SGRIPPETTIEIHE
Trigger: CTCATGAATTTCAATTGTAGTCTCCGGTGGAATTCTCCCACTCCAGAGACACCAGGACCCAAACACCAATTCTAGCTTATTCAGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465015.1
CDS-3UTR CAA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACATCTTTGAAGAAATACTaGGCTTGGGAGGGCTCGATT +
Preference number: 5 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTSLKKY*AWEGSI
Trigger: AATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGA...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGTTACAGGTGGGAATCTaGTTACTCCACGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKLQVGI*LLHVPS
Trigger: GGATGGGACGTGGAGTAACAAGATTCCCACCTGTAA...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTGTCACTTGCTCTGACTaGAGTTCGCTCTCCAGATCG +
Preference number: 5 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVVTCSD*SSLSRS
Trigger: CGATCTGGAGAGCGAACTCAAGTCAGAGCAAGTGAC...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGCCACTCCCAAACCACTaGTCATTTGGCACTCTCGAA +
Preference number: 5 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKPLPNH*SFGTLE
Trigger: TTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGG...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGGACAGGGAAAGAGACTaGGACAAGCTCAGGAACACA +
Preference number: 5 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKDRERD*DKLRNT
Trigger: TGTGTTCCTGAGCTTGTCCAAGTCTCTTTCCCTGTC...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp GTAGTGAGTTTCTCATCAGTAGAAATGCTCAAGAATGAGGTCGCGAAGTTAGACAGCAGCAGCAGCATTTaGTCTGCATCAAAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: VVSFSSVEMLKNEVAKLDSSSSI*SASKFL
Trigger: AAGGAACTTTGATGCAGACAAAATGCTGCTGCTGCT...GTCTAACTTCGCGACCTCATTCTTGAGCATTTCTACTGATGAGAAACTCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAGGAGAAAAGCTCTTTTaGGTGTTGGTTCTGATCCCA +
Preference number: 5 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTGEKLF*VLVLIP
Trigger: TGGGATCAGAACCAACACCAAAAAGAGCTTTTCTCC...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 90 bp AAGCTCATGAAAAGTGAGAACCTGAGATGTGTGAGTGACACGTTTTaGATTATCAGGCTCTACACACTTATGAGCAGTTCTTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: KLMKSENLRCVSDTF*IIRLYTLMSSSSFH
Trigger: GTGAAAGGAAGAACTGCTCATAAGTGTGTAGAGCCTGATAATGCAAAACGTGTCACTCACACATCTCAGGTTCTCACTTTTCATGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS GCA 90 bp TATACACAATATAAGTCATTCATTGAGTATCCAGTGTGTGCCTACTaGCGAGCAAAGCATGAGATGGAGGTGATGAGAGATAGACACAGT +
Preference number: 5 (lower is better)
Translates to: YTQYKSFIEYPVCAY*RAKHEMEVMRDRHS
Trigger: ACTGTGTCTATCTCTCATCACCTCCATCTCATGCTTTGCTCGGCAGTAGGCACACACTGGATACTCAATGAATGACTTATATTGTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490558.5
CDS-3UTR CAA 90 bp CATCATTTACATGTGCCATTCATAGACAAAGGAGTGTGTTTGATGAGCCGGTTGACAGCTGACGAGCACTaGGTCTTTGAAGAAATACTT +
Preference number: 5 (lower is better)
Translates to: HHLHVPFIDKGVCLMSRLTADEH*VFEEIL
Trigger: AAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGT...CAACCGGCTCATCAAACACACTCCTTTGTCTATGAATGGCACATGTAAATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp CTCAAAAATCCACACTCTGTGAGTTATTATTTGCTTTACCTACTCATGGTGGTTTTACAGGTGGGAATCTaGTTACTCCACGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: LKNPHSVSYYLLYLLMVVLQVGI*LLHVPS
Trigger: GGATGGGACGTGGAGTAACAAGATTCCCACCTGTAA...AACCACCATGAGTAGGTAAAGCAAATAATAACTCACAGAGTGTGGATTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS-3UTR CAA 90 bp GACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACATCTTGAGTGGACAATTCATCCAGACTCCTaGGGCAGAACAGGTATATAT +
Preference number: 5 (lower is better)
Translates to: DMCFCGRSWYNKGHLEWTIHPDS*GRTGIY
Trigger: ATATATACCTGTTCTGCCCAAGGAGTCTGGATGAAT...TGTCCACTCAAGATGTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGAAGCACTTGGCAGGGTTaGTTCTATTACATGGTAGTC +
Preference number: 5 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGSTWQG*FYYMVV
Trigger: GACTACCATGTAATAGAACAAACCCTGCCAAGTGCT...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AGATGCGGCATTCAGTTCAATGTTAGAAACCATTTTCTAATAGTCAGGTCCAAGGAGCCTCTGATTCCTTaGACTCTGAAAAATGAAGGA +
Preference number: 5 (lower is better)
Translates to: RCGIQFNVRNHFLIVRSKEPLIP*TLKNEG
Trigger: TCCTTCATTTTTCAGAGTCAAAGGAATCAGAGGCTC...CTTGGACCTGACTATTAGAAAATGGTTTCTAACATTGAACTGAATGCCGCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296280.11
ENST00000392472.6
CDS-3UTR CAA 90 bp AAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGACGCTAAGGTGCATTTATaGAAAACAGTGTATGCTATG +
Preference number: 5 (lower is better)
Translates to: KRVHWTCVFVGGAGIIKDAKVHL*KTVYAM
Trigger: CATAGCATACACTGTTTTCAATAAATGCACCTTAGC...GTCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AAAAAGAGTCCACTGGACATGTGTTTTTGTGGGAGGAGCTGGTATAATAAAGGATGCCTTTTGGTTACATaGGCTTTACCTCATCTTATC +
Preference number: 5 (lower is better)
Translates to: KKSPLDMCFCGRSWYNKGCLLVT*ALPHLI
Trigger: GATAAGATGAGGTAAAGCCAATGTAACCAAAAGGCA...TCCTTTATTATACCAGCTCCTCCCACAAAAACACATGTCCAGTGGACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS-3UTR CAA 90 bp AATCACCAAATAGATCGGGCAGTCCATTTAATGCAAAGATTCTCTGACATGTGTTCTGTGAGTTATTATTaGCTTTACCTACTCATGGTG +
Preference number: 5 (lower is better)
Translates to: NHQIDRAVHLMQRFSDMCSVSYY*LYLLMV
Trigger: CACCATGAGTAGGTAAAGCAAATAATAACTCACAGA...ACACATGTCAGAGAATCTTTGCATTAAATGGACTGCCCGATCTATTTGGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000169293.10
CDS TCA 72 bp CTGCCCGGCCTTGGTCCTCCCAGCTTGACTTGCCTGTaGGCTCGTGCCCGGTGTGGTGTCCGTGATGCCTTA +
Preference number: 6 (lower is better)
Translates to: LPGLGPPSLTCL*ARARCGVRDAL
Trigger: TAAGGCATCACGGACACCACACCGGGCACGAGCTCACAGGCAAGTCAAGCTGGGAGGACCAAGGCCGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000392475.2
CDS GCA 72 bp GGCACTCTCGAAGTGTCCTCCACCACTATCAGGGCCTaGCACGGGAAGAGGCCAGGCTCAGCATTTCGGCCC +
Preference number: 6 (lower is better)
Translates to: GTLEVSSTTIRA*HGKRPGSAFRP
Trigger: GGGCCGAAATGCTGAGCCTGGCCTCTTCCCGTGGCAGGCCCTGATAGTGGTGGAGGACACTTCGAGAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CAA 90 bp CTCCCAGTTCCTCCCAAACCCCCAGTGTGGCCAATGGTCAGGTTATaGCTGGTCCTTCACCCTCTGGCCAGTGTGCTGCTGCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LPVPPKPPVWPMVRL*LVLHPLASVLLPSP
Trigger: GGGGCTGGGCAGCAGCACACTGGCCAGAGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGGGAGGAACTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 72 bp TTCCTTTCACAGCTGTCTCGGCCCCCAGTCCAACCCTaGGGCCCCGAGAGTGTGAAACGGGAGTGGGATGGC +
Preference number: 6 (lower is better)
Translates to: FLSQLSRPPVQP*GPESVKREWDG
Trigger: GCCATCCCACTCCCGTTTCACACTCTCGGGGCCTCAGGGTTGGACTGGGGGCCGAGACAGCTGTGAAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp TCACGTAGGGTCGGATCTTCCGGATCGAGTGACTGGTaGAGGCAGTGTGCGGCGGTCACGATCCAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SRRVGSSGSSDW*RQCAAVTIQLE
Trigger: CTCCAGCTGGATCGTGACCGCCGCACACTGCCTCCACCAGTCACTCGATCCGGAAGATCCGACCCTACGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS TCA 72 bp ATCACCGTGGTGTCTCTACGCTGGGAGCGCAGCACATaGGCTGCTGTGAGGATCCAGGACGCAGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: ITVVSLRWERST*AAVRIQDAESR
Trigger: CCTGCTCTCTGCGTCCTGGATCCTCACAGCAGCTCATGTGCTGCGCTCCCAGCGTAGAGACACCACGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS GCA 72 bp CCTGGCCGGGAGTCTGCTCTGTGTCTGTGGTCTCCCTaGCACAGAAGGTTGCCAGCACCTGGTCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: PGRESALCLWSP*HRRLPAPGPQF
Trigger: AAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGACACAGAGCAGACTCCCGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000392475.2
ENST00000460839.5
ENST00000465015.1
ENST00000490558.5
CDS GCA 72 bp CAGCTGGAGCCTAGAAGGGAGCCTCCGCAGAAGGGCTaGCCATTCAGGTGTGACAGCATGGCAATCCAGGGA +
Preference number: 6 (lower is better)
Translates to: QLEPRREPPQKG*PFRCDSMAIQG
Trigger: TCCCTGGATTGCCATGCTGTCACACCTGAATGGGCAGCCCTTCTGCGGAGGCTCCCTTCTAGGCTCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS CCA 72 bp AGCATTTCGGCCCCCAATGATCCTCTTGACCAGGCTTaGCAGGGAGCGGGAGGGCTGACCACACTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SISAPNDPLDQA*QGAGGLTTLWK
Trigger: CTTCCAGAGTGTGGTCAGCCCTCCCGCTCCCTGCCAAGCCTGGTCAAGAGGATCATTGGGGGCCGAAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 72 bp GAATCACGTAGGGTCGGATCTTCCGGATCGAGTGACTaGTGGAGGCAGTGTGCGGCGGTCACGATCCAGCTG +
Preference number: 6 (lower is better)
Translates to: ESRRVGSSGSSD*WRQCAAVTIQL
Trigger: CAGCTGGATCGTGACCGCCGCACACTGCCTCCACCAGTCACTCGATCCGGAAGATCCGACCCTACGTGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS CCA 72 bp CTGTGGCTGTGCTTGAGCTGTGGTCAGGGGATATGCTaGGCTACCTGGGGAGACAGAGGATCCACTCCTCGC +
Preference number: 6 (lower is better)
Translates to: LWLCLSCGQGIC*ATWGDRGSTPR
Trigger: GCGAGGAGTGGATCCTCTGTCTCCCCAGGTAGCCCAGCATATCCCCTGACCACAGCTCAAGCACAGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp ACGCTGCCCAGGTCCTGGAAGGCACCTCCGCCTCACTaGTCACAAAGACCTGGGCTCACATGGCTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: TLPRSWKAPPPH*SQRPGLTWLPV
Trigger: AACAGGGAGCCATGTGAGCCCAGGTCTTTGTGACAAGTGAGGCGGAGGTGCCTTCCAGGACCTGGGCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 90 bp CCTGCAGCCCTGTATGAGAGCCTCCAGCCCCGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATCAGGACACTGTGGCTCTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: PAALYESLQPRFSPE*SLWNRIRTLWLWVL
Trigger: CAGCACCCAGAGCCACAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGGAGAGAACCGGGGCTGGAGGCTCTCATACAGGGCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
CDS CAA 90 bp TCCAGGACGCAGAGAGCAGGGCCCCACTCCCAAACCACTTGTCATTaGGCACTCTCGAAGTGTCCTCCACCACTATCAGGGCCTGCCACG +
Preference number: 6 (lower is better)
Translates to: SRTQRAGPHSQTTCH*ALSKCPPPLSGPAT
Trigger: CGTGGCAGGCCCTGATAGTGGTGGAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGGGGCCCTGCTCTCTGCGTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CAA 90 bp AGCATGGCAATCCAGGGAGTGGTGCCTTTCTGGGCTGGGCGTCCATaGAAGATCCTGGCCATCAGCTTCCGGGAGAACTTGGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: SMAIQGVVPFWAGRP*KILAISFRENLGSP
Trigger: TGGGCTCCCCAAGTTCTCCCGGAAGCTGATGGCCAGGATCTTCAATGGACGCCCAGCCCAGAAAGGCACCACTCCCTGGATTGCCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS TCA 72 bp AGTCTGGGTGGAGCACCACTCGGGCAGCTGAGCTGTTaGCTGCCCCCGATTTGTCTCGCACATCATGCAAGC +
Preference number: 6 (lower is better)
Translates to: SLGGAPLGQLSC*LPPICLAHHAS
Trigger: GCTTGCATGATGTGCGAGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCCGAGTGGTGCTCCACCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS TCA 72 bp TCCAGGGAGTGGTGCCTTTCTGGGCTGGGCGTCCATTaGAGATCCTGGCCATCAGCTTCCGGGAGAACTTGG +
Preference number: 6 (lower is better)
Translates to: SREWCLSGLGVH*RSWPSASGRTW
Trigger: CCAAGTTCTCCCGGAAGCTGATGGCCAGGATCTTCAATGGACGCCCAGCCCAGAAAGGCACCACTCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS CCA 72 bp CAAGCCCAGGTAGACGGTGACATGCTCCTTGGAGACTaGTATCACCGTGGTGTCTCTACGCTGGGAGCGCAG +
Preference number: 6 (lower is better)
Translates to: QAQVDGDMLLGD*YHRGVSTLGAQ
Trigger: CTGCGCTCCCAGCGTAGAGACACCACGGTGATACCAGTCTCCAAGGAGCATGTCACCGTCTACCTGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS CCA 72 bp CCAAACCCCCAGTGTGGCCAATGGTCAGGTTATTGCTaGTCCTTCACCCTCTGGCCAGTGTGCTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: PNPQCGQWSGYC*SFTLWPVCCCP
Trigger: TGGGCAGCAGCACACTGGCCAGAGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp CCTCCCAAACCCCCAGTGTGGCCAATGGTCAGGTTATaGCTGGTCCTTCACCCTCTGGCCAGTGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PPKPPVWPMVRL*LVLHPLASVLL
Trigger: CAGCAGCACACTGGCCAGAGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 72 bp GATGTTGAAGTCTGGGTGGAGCACCACTCGGGCAGCTaGGCTGTTGACTGCCCCCGATTTGTCTCGCACATC +
Preference number: 6 (lower is better)
Translates to: DVEVWVEHHSGS*AVDCPRFVSHI
Trigger: GATGTGCGAGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCCGAGTGGTGCTCCACCCAGACTTCAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS TCA 72 bp CAGCCACCTGTGAGCTCGTGCCCGGTGTGGTGTCCGTaGTGCCTTATCTTTGTTCTGAGGTCCCTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: QPPVSSCPVWCP*CLIFVLRSLCV
Trigger: GACACACAGGGACCTCAGAACAAAGATAAGGCATCACGGACACCACACCGGGCACGAGCTCACAGGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439271.1
CDS GCA 72 bp ACCCAGCTCCTGTATGAGTACACAGCCCCACCCTGCTaGCTCTCTACAGGCAGCTTGCTTGGCCATAGAAGC +
Preference number: 6 (lower is better)
Translates to: TQLLYEYTAPPC*LSTGSLLGHRS
Trigger: GCTTCTATGGCCAAGCAAGCTGCCTGTAGAGAGGCAGCAGGGTGGGGCTGTGTACTCATACAGGAGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp AGGCCCCGAGGAAGTAAGTCAGCTCACCGTTCCACCTaGGGCTCCACAACACTTTGTGGTAAGCCCATCTGC +
Preference number: 6 (lower is better)
Translates to: RPRGSKSAHRST*GSTTLCGKPIC
Trigger: GCAGATGGGCTTACCACAAAGTGTTGTGGAGCCCCAGGTGGAACGGTGAGCTGACTTACTTCCTCGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 72 bp TCCTCCCAGTTCCTCCCAAACCCCCAGTGTGGCCAATaGTCAGGTTATTGCTGGTCCTTCACCCTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: SSQFLPNPQCGQ*SGYCWSFTLWP
Trigger: TGGCCAGAGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGGGAGGAACTGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp CAGGACGCAGAGAGCAGGGCCCCACTCCCAAACCACTaGTCATTTGGCACTCTCGAAGTGTCCTCCACCACT +
Preference number: 6 (lower is better)
Translates to: QDAESRAPLPNH*SFGTLEVSSTT
Trigger: AGTGGTGGAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGGGGCCCTGCTCTCTGCGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CAA 72 bp AAGTCTGGGTGGAGCACCACTCGGGCAGCTGAGCTGTaGACTGCCCCCGATTTGTCTCGCACATCATGCAAG +
Preference number: 6 (lower is better)
Translates to: KSGWSTTRAAEL*TAPDLSRTSCK
Trigger: CTTGCATGATGTGCGAGACAAATCGGGGGCAGTCAACAGCTCAGCTGCCCGAGTGGTGCTCCACCCAGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS CAA 72 bp ATCCAGGGAGTGGTGCCTTTCTGGGCTGGGCGTCCATaGAAGATCCTGGCCATCAGCTTCCGGGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: IQGVVPFWAGRP*KILAISFRENL
Trigger: CAAGTTCTCCCGGAAGCTGATGGCCAGGATCTTCAATGGACGCCCAGCCCAGAAAGGCACCACTCCCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337774.10
ENST00000468121.1
CDS CAA 90 bp GGGCTCTCCAACAGCTCCACCAGAGCCACGTCATTCTCGAATGTGTaGGGATCATACTGGGGGTGGAGAGTGGTGTGTTTGACGCCGAGA +
Preference number: 6 (lower is better)
Translates to: GLSNSSTRATSFSNV*GSYWGWRVVCLTPR
Trigger: TCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAATGACGTGGCTCTGGTGGAGCTGTTGGAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 72 bp GACTTGCCTGTGAGCTCGTGCCCGGTGTGGTGTCCGTaGTGCCTTATCTTTGTTCTGAGGTCCCTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: DLPVSSCPVWCP*CLIFVLRSLCV
Trigger: GACACACAGGGACCTCAGAACAAAGATAAGGCATCACGGACACCACACCGGGCACGAGCTCACAGGCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392470.6
ENST00000392472.6
ENST00000392475.2
CDS TCA 72 bp GAGAGTTCCTTTTCTGCTAGGGACTATGAGTGCATGTaGGCGGGTGTTGGGCTGCCACAAGGCAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ESSFSARDYECM*AGVGLPQGRER
Trigger: CCTCTCCCTGCCTTGTGGCAGCCCAACACCCGCTCACATGCACTCATAGTCCCTAGCAGAAAAGGAACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS GCA 72 bp ATCTCCATCAGGGTCTCTGGGAACCTTTGCAAGAACTaGTTCCCCCAGCCGCTGACGATGACCATGGCTCCT +
Preference number: 6 (lower is better)
Translates to: ISIRVSGNLCKN*FPQPLTMTMAP
Trigger: AGGAGCCATGGTCATCGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACCCTGATGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 72 bp AGAGAGCAGGGCCCCACTCCCAAACCACTTGTCATTTaGCACTCTCGAAGTGTCCTCCACCACTATCAGGGC +
Preference number: 6 (lower is better)
Translates to: REQGPTPKPLVI*HSRSVLHHYQG
Trigger: GCCCTGATAGTGGTGGAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGGGGCCCTGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CCA 72 bp AGTCTCCCGTTTCAAGTTTTATGTCTCCTGGAGTCCTaGGGAAGGCACCCAGCCCACCCACAGCTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: SLPFQVLCLLES*GRHPAHPQLPS
Trigger: AGAAGGGAGCTGTGGGTGGGCTGGGTGCCTTCCCCAGGACTCCAGGAGACATAAAACTTGAAACGGGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CCA 72 bp TTGCACGAAGTCTCCCGTTTCAAGTTTTATGTCTCCTaGAGTCCTGGGGAAGGCACCCAGCCCACCCACAGC +
Preference number: 6 (lower is better)
Translates to: LHEVSRFKFYVS*SPGEGTQPTHS
Trigger: GCTGTGGGTGGGCTGGGTGCCTTCCCCAGGACTCCAGGAGACATAAAACTTGAAACGGGAGACTTCGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CAA 72 bp CTGTATGAGAGCCTCCAGCCCCGGTTCTCTCCCGAGTaGTCACTATGGAACAGGATCAGGACACTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: LYESLQPRFSPE*SLWNRIRTLWL
Trigger: GAGCCACAGTGTCCTGATCCTGTTCCATAGTGACAACTCGGGAGAGAACCGGGGCTGGAGGCTCTCATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
CDS CAA 72 bp CAGAGAGCAGGGCCCCACTCCCAAACCACTTGTCATTaGGCACTCTCGAAGTGTCCTCCACCACTATCAGGG +
Preference number: 6 (lower is better)
Translates to: QRAGPHSQTTCH*ALSKCPPPLSG
Trigger: CCCTGATAGTGGTGGAGGACACTTCGAGAGTGCCAAATGACAAGTGGTTTGGGAGTGGGGCCCTGCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
CDS CAA 90 bp CAGGTTCCTGGACCTCCATCCCAGGTGTCCTGCCCCAGGATGATTTaGAAGTCAGAAGGGCTGAGCAAGTCTGAATCACGTAGGGTCGGA +
Preference number: 6 (lower is better)
Translates to: QVPGPPSQVSCPRMI*KSEGLSKSESRRVG
Trigger: TCCGACCCTACGTGATTCAGACTTGCTCAGCCCTTCTGACTTCAAAATCATCCTGGGGCAGGACACCTGGGATGGAGGTCCAGGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468121.1
CDS CAA 90 bp AGAGGAGTTGGAGGCTTAGATGAGTCAGGAGAATGTTCTCAGTGCTaGCATGCCAGAGAGGCAGAGCCGATGGGCCCTCCTTTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: RGVGGLDESGECSQC*HAREAEPMGPPFSL
Trigger: CAGGGAGAAAGGAGGGCCCATCGGCTCTGCCTCTCTGGCATGCAAGCACTGAGAACATTCTCCTGACTCATCTAAGCCTCCAACTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 72 bp TTTGGGAAGTCAGGGCTGGTGATCACCCCAGTCCTTTaGGTGAAGAGGTTGTCACTGCACTCCACTCGGCAG +
Preference number: 6 (lower is better)
Translates to: FGKSGLVITPVL*VKRLSLHSTRQ
Trigger: CTGCCGAGTGGAGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS TCA 72 bp GTTGATGGGCAGCTAGGAAATTCTGTGCTGGAACTATaGCAAGTTCTGGCAGCCCATCTGCCCTGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: VDGQLGNSVLEL*QVLAAHLPWGG
Trigger: CCCTCCCCAGGGCAGATGGGCTGCCAGAACTTGTCATAGTTCCAGCACAGAATTTCCTAGCTGCCCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483719.1
CDS GCA 72 bp GGGATTTCAATCTCCATCAGGGTCTCTGGGAACCTTTaGAAGAACTGCTTCCCCCAGCCGCTGACGATGACC +
Preference number: 6 (lower is better)
Translates to: GISISIRVSGNL*KNCFPQPLTMT
Trigger: GGTCATCGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACCCTGATGGAGATTGAAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 72 bp AAAACCCAGCTCCTGTATGAGTACACAGCCCCACCCTaGTGCCTCTCTACAGGCAGCTTGCTTGGCCATAGA +
Preference number: 6 (lower is better)
Translates to: KTQLLYEYTAPP*CLSTGSLLGHR
Trigger: TCTATGGCCAAGCAAGCTGCCTGTAGAGAGGCAGCAGGGTGGGGCTGTGTACTCATACAGGAGCTGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS GCA 72 bp GTTGGAGGCTTAGATGAGTCAGGAGAATGTTCTCAGTaGTTGCATGCCAGAGAGGCAGAGCCGATGGGCCCT +
Preference number: 6 (lower is better)
Translates to: VGGLDESGECSQ*LHAREAEPMGP
Trigger: AGGGCCCATCGGCTCTGCCTCTCTGGCATGCAAGCACTGAGAACATTCTCCTGACTCATCTAAGCCTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp TCTGTGGTCTCCCTGCCACAGAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCTCATTTTCCTGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: SVVSLPQKVAST*SSVSTSFSCLG
Trigger: CCCAAGGCAGGAAAATGAGGTAGAAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392472.6
CDS CCA 72 bp GCATTTCTCCTCCCAGTTCCTCCCAAACCCCCAGTGTaGCCAATGGTCAGGTTATTGCTGGTCCTTCACCCT +
Preference number: 6 (lower is better)
Translates to: AFLLPVPPKPPV*PMVRLLLVLHP
Trigger: AGGGTGAAGGACCAGCAATAACCTGACCATTGGCCACACTGGGGGTTTGGGAGGAACTGGGAGGAGAAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp CCTCCGCCTCACTTGTCACAAAGACCTGGGCTCACATaGCTCCCTGTTGCACAGATGCCCTTTCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: PPPHLSQRPGLT*LPVAQMPFPFF
Trigger: GAAGAAAGGAAAGGGCATCTGTGCAACAGGGAGCCATGTGAGCCCAGGTCTTTGTGACAAGTGAGGCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp GTTTGGGAAGTCAGGGCTGGTGATCACCCCAGTCCTTaGAGTGAAGAGGTTGTCACTGCACTCCACTCGGCA +
Preference number: 6 (lower is better)
Translates to: VWEVRAGDHPSP*SEEVVTALHSA
Trigger: TGCCGAGTGGAGTGCAGTGACAACCTCTTCACTCAAAGGACTGGGGTGATCACCAGCCCTGACTTCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS CAA 72 bp CGGGATTTCAATCTCCATCAGGGTCTCTGGGAACCTTaGCAAGAACTGCTTCCCCCAGCCGCTGACGATGAC +
Preference number: 6 (lower is better)
Translates to: RDFNLHQGLWEP*QELLPPAADDD
Trigger: GTCATCGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACCCTGATGGAGATTGAAATCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CAA 90 bp GTCAACAATCGGGATTTCAATCTCCATCAGGGTCTCTGGGAACCTTaGCAAGAACTGCTTCCCCCAGCCGCTGACGATGACCATGGCTCC +
Preference number: 6 (lower is better)
Translates to: VNNRDFNLHQGLWEP*QELLPPAADDDHGS
Trigger: GGAGCCATGGTCATCGTCAGCGGCTGGGGGAAGCAGTTCTTGCAAAGGTTCCCAGAGACCCTGATGGAGATTGAAATCCCGATTGTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 72 bp GCACCAGAGCTATATCGTGGTTGTAGTTTTGGATGTTaGAGTCTGGGTGGAGCACCACTCGGGCAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: APELYRGCSFGC*SLGGAPLGQLS
Trigger: GCTCAGCTGCCCGAGTGGTGCTCCACCCAGACTTCAACATCCAAAACTACAACCACGATATAGCTCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS TCA 72 bp GCATCTCCAGGACAAGTGTTCATTGCAGGCTCACCTTaGTGTAGTCATAGGGGCAGGGCACCTCAGGATGGT +
Preference number: 6 (lower is better)
Translates to: ASPGQVFIAGSP*CSHRGRAPQDG
Trigger: ACCATCCTGAGGTGCCCTGCCCCTATGACTACATCAAGGTGAGCCTGCAATGAACACTTGTCCTGGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460839.5
CDS GCA 72 bp CCCAGGGGTCTTGGGAGTGATCCATTTCTGGATGTCTaGATTGTGTGGGGTCCCGTCATTCACTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: PRGLGSDPFLDV*IVWGPVIHSVT
Trigger: AGTGACAGAGTGAATGACGGGACCCCACACAATGCAGACATCCAGAAATGGATCACTCCCAAGACCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS GCA 72 bp TACTGGGGGTGGAGAGTGGTGTGTTTGACGCCGAGATaGTGTTCATTTTCATCTGACCGGAGCCTCCAATGC +
Preference number: 6 (lower is better)
Translates to: YWGWRVVCLTPR*CSFSSDRSLQC
Trigger: GCATTGGAGGCTCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS GCA 72 bp AATGTTATAATGCCTCTGAAGGGCACCCCTGGGGTGTaGAGTGTACAGCCTGTGAAGCTACCCATGGTCCTG +
Preference number: 6 (lower is better)
Translates to: NVIMPLKGTPGV*SVQPVKLPMVL
Trigger: CAGGACCATGGGTAGCTTCACAGGCTGTACACTGCACACCCCAGGGGTGCCCTTCAGAGGCATTATAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp GGTATACAGGCATTCAGAGCTCTTGGGGTAAGGGTTTaGGAAGTCAGGGCTGGTGATCACCCCAGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: GIQAFRALGVRV*EVRAGDHPSPL
Trigger: CAAAGGACTGGGGTGATCACCAGCCCTGACTTCCCAAACCCTTACCCCAAGAGCTCTGAATGCCTGTATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS CCA 72 bp TTGTCACTATGGAACAGGATCAGGACACTGTGGCTCTaGGTGCTGATGGGTTCTGGGGCTTTCTCTCCACAG +
Preference number: 6 (lower is better)
Translates to: LSLWNRIRTLWL*VLMGSGAFSPQ
Trigger: CTGTGGAGAGAAAGCCCCAGAACCCATCAGCACCCAGAGCCACAGTGTCCTGATCCTGTTCCATAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
CDS CCA 72 bp AGAGCCACGTCATTCTCGAATGTGTTGGGATCATACTaGGGGTGGAGAGTGGTGTGTTTGACGCCGAGATGC +
Preference number: 6 (lower is better)
Translates to: RATSFSNVLGSY*GWRVVCLTPRC
Trigger: GCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAATGACGTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 72 bp CTGGAGAATCATATCTTGCACTTGGACTCAGGTTCCTaGACCTCCATCCCAGGTGTCCTGCCCCAGGATGAT +
Preference number: 6 (lower is better)
Translates to: LENHILHLDSGS*TSIPGVLPQDD
Trigger: ATCATCCTGGGGCAGGACACCTGGGATGGAGGTCCAGGAACCTGAGTCCAAGTGCAAGATATGATTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468121.1
CDS CAA 72 bp CTGCAGCTGCACCAGAGCTATATCGTGGTTGTAGTTTaGGATGTTGAAGTCTGGGTGGAGCACCACTCGGGC +
Preference number: 6 (lower is better)
Translates to: LQLHQSYIVVVV*DVEVWVEHHSG
Trigger: GCCCGAGTGGTGCTCCACCCAGACTTCAACATCCAAAACTACAACCACGATATAGCTCTGGTGCAGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000392472.6
ENST00000480349.1
ENST00000495249.1
CDS CAA 72 bp GGACCTCCATCCCAGGTGTCCTGCCCCAGGATGATTTaGAAGTCAGAAGGGCTGAGCAAGTCTGAATCACGT +
Preference number: 6 (lower is better)
Translates to: GPPSQVSCPRMI*KSEGLSKSESR
Trigger: ACGTGATTCAGACTTGCTCAGCCCTTCTGACTTCAAAATCATCCTGGGGCAGGACACCTGGGATGGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468121.1
CDS CAA 90 bp CCCAACTCAGCCAAGATTTTCCAGCATCTCCAGGACAAGTGTTCATaGCAGGCTCACCTTGATGTAGTCATAGGGGCAGGGCACCTCAGG +
Preference number: 6 (lower is better)
Translates to: PNSAKIFQHLQDKCS*QAHLDVVIGAGHLR
Trigger: CCTGAGGTGCCCTGCCCCTATGACTACATCAAGGTGAGCCTGCAATGAACACTTGTCCTGGAGATGCTGGAAAATCTTGGCTGAGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460839.5
CDS CAA 72 bp GCTGACGAGCACTTGGTCTTTGAAGAAATACTTGGCTaGGGAGGGCTCGATTTTCCCATGGACAGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ADEHLVFEEILG*GGLDFPMDRRL
Trigger: CAGCCTCCTGTCCATGGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000483719.1
CDS CAA 72 bp GGGGTCTTGGGAGTGATCCATTTCTGGATGTCTGCATaGTGTGGGGTCCCGTCATTCACTCTGTCACTTGCT +
Preference number: 6 (lower is better)
Translates to: GVLGVIHFWMSA*CGVPSFTLSLA
Trigger: AGCAAGTGACAGAGTGAATGACGGGACCCCACACAATGCAGACATCCAGAAATGGATCACTCCCAAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS CAA 72 bp AACAGCTCCACCAGAGCCACGTCATTCTCGAATGTGTaGGGATCATACTGGGGGTGGAGAGTGGTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: NSSTRATSFSNV*GSYWGWRVVCL
Trigger: CAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAATGACGTGGCTCTGGTGGAGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CAA 90 bp AGGCAGTGGGAGAAATCTGAGCTTCAGCAGCGTCCGGAGCAGGATTaGCACGAAGTCTCCCGTTTCAAGTTTTATGTCTCCTGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: RQWEKSELQQRPEQD*HEVSRFKFYVSWSP
Trigger: AGGACTCCAGGAGACATAAAACTTGAAACGGGAGACTTCGTGCAAATCCTGCTCCGGACGCTGCTGAAGCTCAGATTTCTCCCACTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CAA 90 bp TTCTCGAATGTGTTGGGATCATACTGGGGGTGGAGAGTGGTGTGTTaGACGCCGAGATGCTGTTCATTTTCATCTGACCGGAGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: FSNVLGSYWGWRVVC*TPRCCSFSSDRSLQ
Trigger: TTGGAGGCTCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 72 bp TGTTGGGATCATACTGGGGGTGGAGAGTGGTGTGTTTaGCGCCGAGATGCTGTTCATTTTCATCTGACCGGA +
Preference number: 6 (lower is better)
Translates to: CWDHTGGGEWCV*RRDAVHFHLTG
Trigger: TCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 72 bp GTGTTCCAGCTCTCCTGGGGCTCTACAGTCTACAACTaGGAGAGAAGAAGTGAGACCCCTCAACTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: VFQLSWGSTVYN*ERRSETPQLPF
Trigger: AAAAGGCAGTTGAGGGGTCTCACTTCTTCTCTCTCAGTTGTAGACTGTAGAGCCCCAGGAGAGCTGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp TGGATCTGGCCAAACATATTGTTTAGCTCCACGGTGTaGGCTGAAGCCTTTGACAGGGAGAAGCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: WIWPNILFSSTV*AEAFDREKHRA
Trigger: TGCTCTGTGCTTCTCCCTGTCAAAGGCTTCAGCCCACACCGTGGAGCTAAACAATATGTTTGGCCAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392475.2
ENST00000425937.1
ENST00000439271.1
CDS CCA 72 bp CTGACGAGCACTTGGTCTTTGAAGAAATACTTGGCTTaGGAGGGCTCGATTTTCCCATGGACAGGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: LTSTWSLKKYLA*EGSIFPWTGGC
Trigger: ACAGCCTCCTGTCCATGGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000483719.1
CDS CCA 72 bp CTTGGGAGTGATCCATTTCTGGATGTCTGCATTGTGTaGGGTCCCGTCATTCACTCTGTCACTTGCTCTGAC +
Preference number: 6 (lower is better)
Translates to: LGSDPFLDVCIV*GPVIHSVTCSD
Trigger: GTCAGAGCAAGTGACAGAGTGAATGACGGGACCCCACACAATGCAGACATCCAGAAATGGATCACTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS CCA 72 bp ACGTCATTCTCGAATGTGTTGGGATCATACTGGGGGTaGAGAGTGGTGTGTTTGACGCCGAGATGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: TSFSNVLGSYWG*RVVCLTPRCCS
Trigger: TGAACAGCATCTCGGCGTCAAACACACCACTCTCCACCCCCAGTATGATCCCAACACATTCGAGAATGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS CCA 72 bp AGAAAGCAATGTTATAATGCCTCTGAAGGGCACCCCTaGGGTGTGCAGTGTACAGCCTGTGAAGCTACCCAT +
Preference number: 6 (lower is better)
Translates to: RKQCYNASEGHP*GVQCTACEATH
Trigger: ATGGGTAGCTTCACAGGCTGTACACTGCACACCCCAGGGGTGCCCTTCAGAGGCATTATAACATTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp TCTGTGGTCTCCCTGCCACAGAAGGTTGCCAGCACCTaGTCCTCAGTTTCTACCACATTTCCAAAGAATGGA +
Preference number: 6 (lower is better)
Translates to: SVVSLPQKVAST*SSVSTTFPKNG
Trigger: TCCATTCTTTGGAAATGTGGTAGAAACTGAGGACCAGGTGCTGGCAACCTTCTGTGGCAGGGAGACCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490558.5
CDS CAA 72 bp GCCAAGATTTTCCAGCATCTCCAGGACAAGTGTTCATaGCAGGCTCACCTTGATGTAGTCATAGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: AKIFQHLQDKCS*QAHLDVVIGAG
Trigger: CCCTGCCCCTATGACTACATCAAGGTGAGCCTGCAATGAACACTTGTCCTGGAGATGCTGGAAAATCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460839.5
CDS CAA 90 bp CCCTCTGGCTTTTCCTCTCTCCTCTCTCTCTCCTTTGACTTGCTCTaGCACTCCCAGGAACCTGACAACAAAATCTGTCTTCCTACCGAA +
Preference number: 6 (lower is better)
Translates to: PSGFSSLLSLSFDLL*HSQEPDNKICLPTE
Trigger: TTCGGTAGGAAGACAGATTTTGTTGTCAGGTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGAGAGAGGAAAAGCCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392472.6
ENST00000392475.2
ENST00000439271.1
CDS CAA 90 bp CTCTCTCCCTCTGGCTTTTCCTCTCTCCTCTCTCTCTCCTTTGACTaGCTCTTGCACTCCCAGGAACCTGACAACAAAATCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LSPSGFSSLLSLSFD*LLHSQEPDNKICLP
Trigger: AGGAAGACAGATTTTGTTGTCAGGTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGAGAGAGGAAAAGCCAGAGGGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392472.6
ENST00000392475.2
ENST00000439271.1
CDS CAA 90 bp GGGGTGTGCAGTGTACAGCCTGTGAAGCTACCCATGGTCCTGCTTTaGAGGTCTCTTCCATTCATTATGGTACTACTGTGTGGTCAACTC +
Preference number: 6 (lower is better)
Translates to: GVCSVQPVKLPMVLL*RSLPFIMVLLCGQL
Trigger: GAGTTGACCACACAGTAGTACCATAATGAATGGAAGAGACCTCAAAAGCAGGACCATGGGTAGCTTCACAGGCTGTACACTGCACACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 72 bp ATCAAAGCCTGTGAAACGCTCCTCATTGGAGAAATCTaGCCGGAAAGTGATGGACATGAAGGAGCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: IKACETLLIGEI*PESDGHEGARG
Trigger: TCCCCTGGCTCCTTCATGTCCATCACTTTCCGGTCAGATTTCTCCAATGAGGAGCGTTTCACAGGCTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000392475.2
ENST00000460839.5
ENST00000465015.1
ENST00000490558.5
CDS TCA 72 bp GGTGTGTTTGACGCCGAGATGCTGTTCATTTTCATCTaGCCGGAGCCTCCAATGCTTGCCCAGGATGATTTT +
Preference number: 6 (lower is better)
Translates to: GVFDAEMLFIFI*PEPPMLAQDDF
Trigger: AAAATCATCCTGGGCAAGCATTGGAGGCTCCGGTCAGATGAAAATGAACAGCATCTCGGCGTCAAACACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337774.10
CDS TCA 72 bp GTGACACGTTTTGCATTATCAGGCTCTACACACTTATaGGCAGTTCTTCCTTTCACAGCTGTCTCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: VTRFALSGSTHL*AVLPFTAVSAP
Trigger: GGGGGCCGAGACAGCTGTGAAAGGAAGAACTGCTCATAAGTGTGTAGAGCCTGATAATGCAAAACGTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS GCA 72 bp TGCATTGTGTGGGGTCCCGTCATTCACTCTGTCACTTaGTCTGACTTGAGTTCGCTCTCCAGATCGATTTCA +
Preference number: 6 (lower is better)
Translates to: CIVWGPVIHSVT*SDLSSLSRSIS
Trigger: TGAAATCGATCTGGAGAGCGAACTCAAGTCAGAGCAAGTGACAGAGTGAATGACGGGACCCCACACAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS CCA 72 bp TGTAGAGAAGGTGATCAGCCCGTGTTCCAGCTCTCCTaGGGCTCTACAGTCTACAATTTTACAGGTGGGAAT +
Preference number: 6 (lower is better)
Translates to: CREGDQPVFQLS*GSTVYNFTGGN
Trigger: ATTCCCACCTGTAAAATTGTAGACTGTAGAGCCCCAGGAGAGCTGGAACACGGGCTGATCACCTTCTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000337774.10
ENST00000392472.6
CDS CAA 72 bp TCACAGCTGACGAGCACTTGGTCTTTGAAGAAATACTaGGCTTGGGAGGGCTCGATTTTCCCATGGACAGGA +
Preference number: 6 (lower is better)
Translates to: SQLTSTWSLKKY*AWEGSIFPWTG
Trigger: TCCTGTCCATGGGAAAATCGAGCCCTCCCAAGCCAAGTATTTCTTCAAAGACCAAGTGCTCGTCAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000483719.1
CDS CAA 72 bp GAGAAATCTGAGCTTCAGCAGCGTCCGGAGCAGGATTaGCACGAAGTCTCCCGTTTCAAGTTTTATGTCTCC +
Preference number: 6 (lower is better)
Translates to: EKSELQQRPEQD*HEVSRFKFYVS
Trigger: GGAGACATAAAACTTGAAACGGGAGACTTCGTGCAAATCCTGCTCCGGACGCTGCTGAAGCTCAGATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CAA 90 bp TCAGTTTCTACCCACATGCTCTTCCTCAGCACTGCGAGCTTCCTTTaGTTTTCCATCACCCTGAAGCCTGTGCTGTTTGCACTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: SVSTHMLFLSTASFL*FSITLKPVLFALLA
Trigger: TGCCAAAAGTGCAAACAGCACAGGCTTCAGGGTGATGGAAAACAAAAGGAAGCTCGCAGTGCTGAGGAAGAGCATGTGGGTAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465015.1
CDS TCA 72 bp AAACCCATCTGGGACAGTGATATTCCAAGTCACCTCTaGATCACTGGGATAGGAGTCTGGATAACCAGGCGA +
Preference number: 6 (lower is better)
Translates to: KPIWDSDIPSHL*ITGIGVWITRR
Trigger: TCGCCTGGTTATCCAGACTCCTATCCCAGTGATTCAGAGGTGACTTGGAATATCACTGTCCCAGATGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392475.2
ENST00000425937.1
ENST00000439271.1
ENST00000460839.5
CDS GCA 72 bp CTGGCTTTTCCTCTCTCCTCTCTCTCTCCTTTGACTTaGTCTTGCACTCCCAGGAACCTGACAACAAAATCT +
Preference number: 6 (lower is better)
Translates to: LAFPLSSLSPLT*SCTPRNLTTKS
Trigger: AGATTTTGTTGTCAGGTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGAGAGAGGAAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392472.6
ENST00000392475.2
ENST00000439271.1
CDS GCA 72 bp TCAGGATGGTCCTCAATGTCAAATATGTCCTCAAACTaGAGGTTGACCATGAAACCCTCCTCCAGCTCGATG +
Preference number: 6 (lower is better)
Translates to: SGWSSMSNMSSN*RLTMKPSSSSM
Trigger: CATCGAGCTGGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGACATATTTGACATTGAGGACCATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS GCA 72 bp AGAAATCTGAGCTTCAGCAGCGTCCGGAGCAGGATTTaGACGAAGTCTCCCGTTTCAAGTTTTATGTCTCCT +
Preference number: 6 (lower is better)
Translates to: RNLSFSSVRSRI*TKSPVSSFMSP
Trigger: AGGAGACATAAAACTTGAAACGGGAGACTTCGTGCAAATCCTGCTCCGGACGCTGCTGAAGCTCAGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425937.1
CDS CCA 72 bp TACTGTGTGGTCAACTCACCTGCCCAGTGTCAATTTTaGGTAGGGGAAGGTCTACTGAGGTTTAAGCAGACT +
Preference number: 6 (lower is better)
Translates to: YCVVNSPAQCQF*VGEGLLRFKQT
Trigger: AGTCTGCTTAAACCTCAGTAGACCTTCCCCTACCCAAAATTGACACTGGGCAGGTGAGTTGACCACACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp TCTGGCTTTTCCTCTCTCCTCTCTCTCTCCTTTGACTaGCTCTTGCACTCCCAGGAACCTGACAACAAAATC +
Preference number: 6 (lower is better)
Translates to: SGFSSLLSLSFD*LLHSQEPDNKI
Trigger: GATTTTGTTGTCAGGTTCCTGGGAGTGCAAGAGCAAGTCAAAGGAGAGAGAGAGGAGAGAGGAAAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000169293.10
ENST00000392472.6
ENST00000392475.2
ENST00000439271.1
CDS CAA 90 bp ACCTCAGGATGGTCCTCAATGTCAAATATGTCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCCAGCTCGATGGTATACAGGCATTCA +
Preference number: 6 (lower is better)
Translates to: TSGWSSMSNMSSNCR*TMKPSSSSMVYRHS
Trigger: TGAATGCCTGTATACCATCGAGCTGGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGACATATTTGACATTGAGGACCATCCTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS CAA 90 bp TGGGAATGTGACCATGTCCTTTCTCAGCTCAGAATCACGAATGGCTaGCTGTCACCCCCAAAAATAAACACCACACTCTTCAGCATGGTG +
Preference number: 6 (lower is better)
Translates to: WECDHVLSQLRITNG*LSPPKINTTLFSMV
Trigger: CACCATGCTGAAGAGTGTGGTGTTTATTTTTGGGGGTGACAGCAAGCCATTCGTGATTCTGAGCTGAGAAAGGACATGGTCACATTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 72 bp TGTGTGGGGTCCCGTCATTCACTCTGTCACTTGCTCTaGCTTGAGTTCGCTCTCCAGATCGATTTCATTTTT +
Preference number: 6 (lower is better)
Translates to: CVGSRHSLCHLL*LEFALQIDFIF
Trigger: AAAAATGAAATCGATCTGGAGAGCGAACTCAAGTCAGAGCAAGTGACAGAGTGAATGACGGGACCCCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000169293.10
ENST00000392470.6
CDS GCA 72 bp TCTACAACTGAGAGAGAAGAAGTGAGACCCCTCAACTaGCTTTTGCTCATCCTCCTTTGGCTATCTGATGGA +
Preference number: 6 (lower is better)
Translates to: STTEREEVRPLN*LLLILLWLSDG
Trigger: TCCATCAGATAGCCAAAGGAGGATGAGCAAAAGGCAGTTGAGGGGTCTCACTTCTTCTCTCTCAGTTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp TGGTCCTCAATGTCAAATATGTCCTCAAACTGCAGGTaGACCATGAAACCCTCCTCCAGCTCGATGGTATAC +
Preference number: 6 (lower is better)
Translates to: WSSMSNMSSNCR*TMKPSSSSMVY
Trigger: GTATACCATCGAGCTGGAGGAGGGTTTCATGGTCAACCTGCAGTTTGAGGACATATTTGACATTGAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
ENST00000460839.5
CDS CAA 72 bp GGGGCTCTACAGTCTACAATTTTACAGGTGGGAATCTaGTTACTCCACGTCCCATCCTTCAGACACTCAATC +
Preference number: 6 (lower is better)
Translates to: GALQSTILQVGI*LLHVPSFRHSI
Trigger: GATTGAGTGTCTGAAGGATGGGACGTGGAGTAACAAGATTCCCACCTGTAAAATTGTAGACTGTAGAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296280.11
ENST00000337774.10
ENST00000392472.6
CDS CCA 72 bp TTGTTACTCCACGTCCCATCCTTCAGACACTCAATCTaGAATGTGTCCATCTCCACATTATCCTTCAGCACT +
Preference number: 6 (lower is better)
Translates to: LLLHVPSFRHSI*NVSISTLSFST
Trigger: AGTGCTGAAGGATAATGTGGAGATGGACACATTCCAGATTGAGTGTCTGAAGGATGGGACGTGGAGTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000169293.10
ENST00000296280.11
ENST00000337774.10
ENST00000392470.6
ENST00000392472.6
CDS CCA 72 bp AATAAGCTAGAATTGGTGTTTGGGTCCTGGTGTCTCTaGAGTGGGAGAATTCCACCGGAGACTACAATTGAA +
Preference number: 6 (lower is better)
Translates to: NKLELVFGSWCL*SGRIPPETTIE
Trigger: TTCAATTGTAGTCTCCGGTGGAATTCTCCCACTCCAGAGACACCAGGACCCAAACACCAATTCTAGCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465015.1
CDS CAA 72 bp AGTGTACAGCCTGTGAAGCTACCCATGGTCCTGCTTTaGAGGTCTCTTCCATTCATTATGGTACTACTGTGT +
Preference number: 6 (lower is better)
Translates to: SVQPVKLPMVLL*RSLPFIMVLLC
Trigger: ACACAGTAGTACCATAATGAATGGAAGAGACCTCAAAAGCAGGACCATGGGTAGCTTCACAGGCTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS GCA 72 bp TATAAGTCATTCATTGAGTATCCAGTGTGTGCCTACTaGCGAGCAAAGCATGAGATGGAGGTGATGAGAGAT +
Preference number: 6 (lower is better)
Translates to: YKSFIEYPVCAY*RAKHEMEVMRD
Trigger: ATCTCTCATCACCTCCATCTCATGCTTTGCTCGGCAGTAGGCACACACTGGATACTCAATGAATGACTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490558.5
CDS TCA 72 bp AGTAGGCAATCTAGAATGTCCTCTTTATTTTATCTATaGGCCCAGAGAGGAGACTTGACTCGTCTAAGGACA +
Preference number: 6 (lower is better)
Translates to: SRQSRMSSLFYL*AQRGDLTRLRT
Trigger: TGTCCTTAGACGAGTCAAGTCTCCTCTCTGGGCTCATAGATAAAATAAAGAGGACATTCTAGATTGCCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CCA 72 bp AGGCTTCTCCCCAATACTTTATTCATCCAGACTCCTTaGGCAGAACAGGTATATATACCTGTGTTATTGTTG +
Preference number: 6 (lower is better)
Translates to: RLLPNTLFIQTP*AEQVYIPVLLL
Trigger: CAACAATAACACAGGTATATATACCTGTTCTGCCCAAGGAGTCTGGATGAATAAAGTATTGGGGAGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296280.11
ENST00000337774.10
ENST00000392472.6
ENST00000468121.1
CDS CCA 72 bp AGGCTTCTCCCCAATACTTTATTCATCCAGACTCCTTaGGCAGAACAGGTATATATACCTGGATTAGTGAAA +
Preference number: 6 (lower is better)
Translates to: RLLPNTLFIQTP*AEQVYIPGLVK
Trigger: TTTCACTAATCCAGGTATATATACCTGTTCTGCCCAAGGAGTCTGGATGAATAAAGTATTGGGGAGAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS TCA 72 bp CATACAGCAAGTTACTATCAGAATGAGAGCAAGATTTaGCCTCAAACCCAGGGCTGTTTTAGTAAATGGAAC +
Preference number: 6 (lower is better)
Translates to: HTASYYQNESKI*PQTQGCFSKWN
Trigger: GTTCCATTTACTAAAACAGCCCTGGGTTTGAGGTCAAATCTTGCTCTCATTCTGATAGTAACTTGCTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp AAGAATGGAAACTGTATACACAATATAAGTCATTCATaGAGTATCCAGTGTGTGCCTACTGCCGAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: KNGNCIHNISHS*SIQCVPTAEQS
Trigger: GCTTTGCTCGGCAGTAGGCACACACTGGATACTCAATGAATGACTTATATTGTGTATACAGTTTCCATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490558.5
CDS CAA 72 bp CTTCTCCATTTGACAGACTCTTTAATAAGCATACATTaGTGGCCACCATCTCACTGGCATTTTGAAATAGCT +
Preference number: 6 (lower is better)
Translates to: LLHLTDSLISIH*WPPSHWHFEIA
Trigger: AGCTATTTCAAAATGCCAGTGAGATGGTGGCCACAAATGTATGCTTATTAAAGAGTCTGTCAAATGGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480349.1
CDS CAA 72 bp TTAGTGAAAGAGGTTAGGAGAGGAGGGAGAAAATGGTaGATTTGTAACACATGGAAAATAGATCTGGGTATT +
Preference number: 6 (lower is better)
Translates to: LVKEVRRGGRKW*ICNTWKIDLGI
Trigger: AATACCCAGATCTATTTTCCATGTGTTACAAATCAACCATTTTCTCCCTCCTCTCCTAACCTCTTTCACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480349.1