RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARVELD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000152939

Ensembl transcript IDs: ENST00000325631.10, ENST00000413223.3, ENST00000436532.7, ENST00000454295.6, ENST00000512803.5, ENST00000515844.1, ENST00000611064.4, ENST00000611349.1, ENST00000612528.1, ENST00000614617.4, ENST00000622563.4, ENST00000622835.4, ENST00000645446.1, ENST00000647531.1

Found 499 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATaGGGAGATGGAGAGATGTACAGTCACACTGATGAAAGACAGGGA +
Preference number: 1 (lower is better)
Translates to: QYHSYNSMCPGQAGL*GDGEMYSHTDERQG
Trigger: TCCCTGTCTTTCATCAGTGTGACTGTACATCTCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGCCACAGAGCCACAGTaGAGCACCAGGCTAAGGCCA +
Preference number: 2 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWATEPQ*STRLRP
Trigger: TGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR GCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 2 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPTGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: AYWLNQLEADLGSACFSTNRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: WLNQLEADLGSACFSTTENRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTAATTGGAAGCTGATTTaGGAAGCGCTTGCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPNWKLI*EALASL
Trigger: TAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 2 (lower is better)
Translates to: TNWKLIWEALASLPQRLATGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQNRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR GCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACCGAGATCGCACCACTaGACTCCAGTCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKPRSHH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGTGCGATCTCGG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGTGTCCAGGGCAGGCTaGACTATGGGGAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKVSRAG*TMGRWR
Trigger: TCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACAC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGACCAGGCTAAGGCCATaGGTTAACACCACAAACCAG +
Preference number: 2 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWTRLRP*VNTTNQ
Trigger: CTGGTTTGTGGTGTTAACTCATGGCCTTAGCCTGGT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR GCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGATTTGGGAAGCGCTTaGTTCTCTACCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQDLGSA*FSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TERLSNLPKIRMSENVDLNRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR GCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGATTTGGGAAGCGCTTaGTTCTCTACCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: TERLSNLPKIRMSENVDLDLGSA*FSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGAGACACTTGGGCTTTTaGTTAAGTAGGTTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWRHLGF*LSRLGL
Trigger: CAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 90 bp ACAAACCAGAAAGGCACCAGACACTTGGGCTTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGACCTTTTCTTGAGACTCATTCTTTAT +
Preference number: 2 (lower is better)
Translates to: TNQKGTRHLGFWLSR*GLLIKDLFLRLILY
Trigger: ATAAAGAATGAGTCTCAAGAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTTCTGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 2 (lower is better)
Translates to: FNVAYWLNQLEADLGSACTGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR GCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 2 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKTGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR GCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 2 (lower is better)
Translates to: TERLSNLPKIRMSENVDLTGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 90 bp AAATGTCTGAGTAAAATCTTTAATGTTGCATACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: KCLSKIFNVAYWLNQ*EADLGSACFSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAAGATTTTACTCAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 90 bp CAGAAAGGCACCAGACACTTGGGCTTTTGGTTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTCTTGAGACTCATTCTTTATAATTTA +
Preference number: 2 (lower is better)
Translates to: QKGTRHLGFWLSRLG*LIKDLFLRLILYNL
Trigger: TAAATTATAAAGAATGAGTCTCAAGAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR TCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAAAACCAATTGGAAGCTaGTTTGGGAAGCGCTTGCTT +
Preference number: 2 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPKPIGS*FGKRLL
Trigger: AAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGAAATTGGTCACAGATaGAAGATGAACACAGGATTT +
Preference number: 2 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQEIGHR*KMNTGF
Trigger: AAATCCTGTGTTCATCTTTCATCTGTGACCAATTTC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGAAATTGGTCACAGATaGAAGATGAACACAGGATTT +
Preference number: 2 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWEIGHR*KMNTGF
Trigger: AAATCCTGTGTTCATCTTTCATCTGTGACCAATTTC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR GCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAACTTGCCCATCACACTaGCAGGATACGATCTCTAAA +
Preference number: 2 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPTCPSH*QDTISK
Trigger: TTTAGAGATCGTATCCTGGCAGTGTGATGGGCAAGT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 90 bp AAAATCTTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAAAAG +
Preference number: 2 (lower is better)
Translates to: KIFNVAYWLNQLEAD*GSACFSTTEASIKK
Trigger: CTTTTTAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAACTGAAAATGTTGATCTaGGATTCAAACACCTTTCAA +
Preference number: 2 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQLKMLI*DSNTFQ
Trigger: TTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAG...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCACTGAAAATGTTGATCTaGGATTCAAACACCTTTCAA +
Preference number: 2 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPLKMLI*DSNTFQ
Trigger: TTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAG...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTTCTGAGGTCAGGAGCTaGAGACCAACCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPSEVRS*RPTWPT
Trigger: TGTTGGCCAGGTTGGTCTCAAGCTCCTGACCTCAGA...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTCAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTAAAGTAGCACCAGAATaGATGGTCCACTTGCCCATC +
Preference number: 3 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPKVAPE*MVHLPI
Trigger: GATGGGCAAGTGGACCATCAATTCTGGTGCTACTTT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTGAGAGATTAAGCAATTaGCCCAAGATCAGGATGTCT +
Preference number: 3 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPERLSN*PKIRMS
Trigger: AGACATCCTGATCTTGGGCAAATTGCTTAATCTCTC...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 3 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CCA 72 bp ACCACAAACCAGAAAGGCACCAGACACTTGGGCTTTTaGTTAAGTAGGTTGGGCTTGCTCATTAAGGACCTT +
Preference number: 3 (lower is better)
Translates to: TTNQKGTRHLGF*LSRLGLLIKDL
Trigger: AAGGTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTTCTGGTTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CCA 72 bp TCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATaGGGAGATGGAGAGATGTACAGTCACACTGATGAA +
Preference number: 3 (lower is better)
Translates to: SYNSMCPGQAGL*GDGEMYSHTDE
Trigger: TTCATCAGTGTGACTGTACATCTCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGCAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAAAGTAGCACCAGAATaGATGGTCCACTTGCCCATC +
Preference number: 3 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQKVAPE*MVHLPI
Trigger: GATGGGCAAGTGGACCATCAATTCTGGTGCTACTTT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAAAGGCACCAGACACTaGGGCTTTTGGTTAAGTAGG +
Preference number: 3 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQKGTRH*GFWLSR
Trigger: CCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGAAAGGCACCAGACACTaGGGCTTTTGGTTAAGTAGG +
Preference number: 3 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWKGTRH*GFWLSR
Trigger: CCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 3 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGAGAGATTAAGCAATTaGCCCAAGATCAGGATGTCT +
Preference number: 3 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQERLSN*PKIRMS
Trigger: AGACATCCTGATCTTGGGCAAATTGCTTAATCTCTC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGAGAGATTAAGCAATTaGCCCAAGATCAGGATGTCT +
Preference number: 3 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWERLSN*PKIRMS
Trigger: AGACATCCTGATCTTGGGCAAATTGCTTAATCTCTC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTC +
Preference number: 3 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQLSRLG*LIKDLF
Trigger: GAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
3UTR-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTC +
Preference number: 3 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWLSRLG*LIKDLF
Trigger: GAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGAC +
Preference number: 3 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWFWLSR*GLLIKD
Trigger: GTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCACAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTTGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTGGGATCAGCGCTCACTaGCCGCTCACTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPGISAH*PLTVMK
Trigger: CTTCATGACAGTGAGCGGGCAGTGAGCGCTGATCCC...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTATCCCGGGGAAACACTaGGTCAGCCTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPIPGKH*VSLFPG
Trigger: TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGAT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGTGAGTCTCTGTCTCTaGGCAGCCGCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIVSLCL*AAARKS
Trigger: GCTCTTCCTGGCGGCTGCGCAGAGACAGAGACTCAC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGCTGAGGCAGGAAAATaGCGTGAACTTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIAEAGK*RELGRR
Trigger: CCGCCTCCCAAGTTCACGTCATTTTCCTGCCTCAGC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTAGGCAGAGGCTGCAGTaGGCCAAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPRQRLQ*AKIIPL
Trigger: CAGTGGTATGATCTTGGCTCACTGCAGCCTCTGCCT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGCCTGGCTGACACAGTaGGTCTCTGTCTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAAWLTQ*VSVSAQ
Trigger: CTGCGCAGAGACAGAGACTCACTGTGTCAGCCAGGC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACGCTGCCCAGGACTCTaGAACCGGTATCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALRCPGL*NRYRAP
Trigger: GGGAGCCCGATACCGGTTTCAGAGTCCTGGGCAGCG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTATCCCGGGGAAACACTaGGTCAGCCTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIIPGKH*VSLFPG
Trigger: TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGAT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACCAGGCGTTGTGGCATaGGCCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAPGVVA*ACDPSY
Trigger: GTAGCTGGGATCACAGGCGCATGCCACAACGCCTGG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTATAGGGCAGGTCGCTTaGGACCTCATCGTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIIGQVA*DLIVAP
Trigger: AGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTAT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIDLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAGGCAGAGGTTGCAGTaGGTCGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLARQRLQ*VEIAPL
Trigger: CAGTGGCGCAATCTCGACTCACTGCAACCTCTGCCT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTGTGATTTTCACACCTaGGCAGCCGCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRICDFHT*AAARKS
Trigger: GCTCTTCCTGGCGGCTGCGCAGGTGTGAAAATCACA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAGTGAGCCGAGATTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRISEPRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATCGAGATTGCGCCACTaGACTCCAGCCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLASRLRH*TPAWLT
Trigger: TGTCAGCCAGGCTGGAGTGCAGTGGCGCAATCTCGA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTGAGGGGCGAACGGTaGTTTGGTCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRILRGER*FGLAGE
Trigger: CTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLADLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTCCTCAGGACAGCCTaGACTTCTGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIFLRTA*TSADSS
Trigger: AGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRINRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGCCACAGAGCCACAGTaGAGCACCAGGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTATEPQ*STRLRP
Trigger: TGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGCCACAGAGCCACAGTaGAGCACCAGGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALATEPQ*STRLRP
Trigger: TGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGCCTGGCTGACACAGTaGGTCTCTGTCTCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALAWLTQ*VSVSAQ
Trigger: CTGCGCAGAGACAGAGACTCACTGTGTCAGCCAGGC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTTATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAGCCCCCATACATACTaGCCAATCCACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLASPHTY*PIHQRL
Trigger: GAGGCGTTGGTGGATTGGGCAGTATGTATGGGGGCT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAGTGAGCCGAGATTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLASEPRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAGATGAAGCATCCCTaGTGGGCACAGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKMKHP*WAQWLT
Trigger: TGTGAGCCACTGTGCCCAGCAGGGATGCTTCATCTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGTGAGTCTCTGTCTCTaGGCAGCCGCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEVSLCL*AAARKS
Trigger: GCTCTTCCTGGCGGCTGCGCAGAGACAGAGACTCAC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCCCAGGCGTTGTGGCATaGGCCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTPGVVA*ACDPSY
Trigger: GTAGCTGGGATCACAGGCGCATGCCACAACGCCTGG...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTGAGGGGCGAACGGTaGTTTGGTCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLALRGER*FGLAGE
Trigger: CTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTTAGGAATGTGGCCTaGGGGGATGTGTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIFRNVA*GDVSTQ
Trigger: CTGAGTGGACACATCCCCCCAGGCCACATTCCTAAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGGGCAGGCTGGACTATaGGGAGATGGAGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAGQAGL*GDGEMY
Trigger: GTACATCTCTCCATCTCCCCATAGTCCAGCCTGCCC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTGTCGGCTTTCCGAATaGTGTGGCAATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRICRLSE*CGNLLI
Trigger: GATGAGCAGATTGCCACATCATTCGGAAAGCCGACA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGCTGAGGCAGGAAAATaGCGTGAACTTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALAEAGK*RELGRR
Trigger: CCGCCTCCCAAGTTCACGTCATTTTCCTGCCTCAGC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAATCCCGGGGAAACACTaGGTCAGCCTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALIPGKH*VSLFPG
Trigger: TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGAT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGATCCCGGGGAAACACTaGGTCAGCCTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEIPGKH*VSLFPG
Trigger: TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGAT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCATCCCGGGGAAACACTaGGTCAGCCTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTIPGKH*VSLFPG
Trigger: TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGAT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCACCAACGCCTCCCATaGCATACGGTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIHQRLP*HTVVNI
Trigger: GATATTCACAACCGTATGGCATGGGAGGCGTTGGTG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACCGAGATCGCACCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALPRSHH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGTGCGATCTCGG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAATAGGGCAGGTCGCTTaGGACCTCATCGTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALIGQVA*DLIVAP
Trigger: AGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTAT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGTGTCCAGGGCAGGCTaGACTATGGGGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEVSRAG*TMGRWR
Trigger: TCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACAC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGTGTCCAGGGCAGGCTaGACTATGGGGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTVSRAG*TMGRWR
Trigger: TCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACAC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTCTTCTGTGTCACTTaGGTAGAAGTCTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIFFCVT*VEVWAE
Trigger: TTCGGCCCAGACTTCTACTCAAGTGACACAGAAGAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCATCGGAGATGTACCTaGTATCAGACACCGGCTTAT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIHRRCT*YQTPAY
Trigger: ATAAGCCGGTGTCTGATATCAGGTACATCTCCGATG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALDLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEDLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTDLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRITKGSF*PSVGIF
Trigger: AAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRICECKL*HKQRHR
Trigger: CCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCGCTCATCATCTGTCTaGATCACAGGGTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIRSSSV*ITGYFA
Trigger: GGCAAAATACCCTGTGATTCAGACAGATGATGAGCG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATGTCGGCTTTCCGAATaGTGTGGCAATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLACRLSE*CGNLLI
Trigger: GATGAGCAGATTGCCACATCATTCGGAAAGCCGACA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTAAACCAATTGGAAGCTaGTTTGGGAAGCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPKPIGS*FGKRLL
Trigger: AAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGCCACAGAGCCACAGTaGAGCACCAGGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQATEPQ*STRLRP
Trigger: TGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACACACGGCAGGTGACTaGAACTTTAATGCACCTAGG +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAHTAGD*NFNAPR
Trigger: CCTAGGTGCATTAAAGTTTCAGTCACCTGCCGTGTG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTGTGATTTTCACACCTaGGCAGCCGCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTCDFHT*AAARKS
Trigger: GCTCTTCCTGGCGGCTGCGCAGGTGTGAAAATCACA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATGTGATTTTCACACCTaGGCAGCCGCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALCDFHT*AAARKS
Trigger: GCTCTTCCTGGCGGCTGCGCAGGTGTGAAAATCACA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACACCAACGCCTCCCATaGCATACGGTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAHQRLP*HTVVNI
Trigger: GATATTCACAACCGTATGGCATGGGAGGCGTTGGTG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAGCCCCCATACATACTaGCCAATCCACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALSPHTY*PIHQRL
Trigger: GAGGCGTTGGTGGATTGGGCAGTATGTATGGGGGCT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAGTGAGCCGAGATTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTESEPRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGATTTGGGAAGCGCTTaGTTCTCTACCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLADLGSA*FSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAACCAAAGCAATACTaGCCAATCCACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKPKQY*PIHQRL
Trigger: GAGGCGTTGGTGGATTGGGCAGTATTGCTTTGGTTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436532.7
ENST00000611064.4
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIACPDS*IFHHLT
Trigger: TGTCAAATGATGGAAGATCCAGGAATCGGGACAGGC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGGTGGGTTCTTATGGTaGTATCTTGATAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIGGFLW*YLDRAG
Trigger: ACCTGCCCTATCAAGATACCACCATAAGAACCCACC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGACAAAGCGCCTTACTaGTTTGAGATCTGGCGCTAT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIDKAPY*FEIWRY
Trigger: ATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTTGAGGGGCGAACGGTaGTTTGGTCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTELRGER*FGLAGE
Trigger: CTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGTCTGTCACCACTGGTaGCCATTTCACACATTTTCC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIVCHHW*PFHTFS
Trigger: GGAAAATGTGTGAAATGGCCACCAGTGGTGACAGAC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000611064.4
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGCTTTCCGAATGATGTaGCAATCTGCTCATCACTGC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIAFRMM*QSAHHC
Trigger: GCAGTGATGAGCAGATTGCCACATCATTCGGAAAGC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGGGCAGGCTGGACTATaGGGAGATGGAGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALGQAGL*GDGEMY
Trigger: GTACATCTCTCCATCTCCCCATAGTCCAGCCTGCCC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTTGTCTGTCACCACTaGTGGCCATTTCACACTCCT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIFVCHH*WPFHTP
Trigger: AGGAGTGTGAAATGGCCACCAGTGGTGACAGACAAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000454295.6
ENST00000614617.4
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACATCGGAGATGTACCTaGTATCAGACACCGGCTTAT +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAHRRCT*YQTPAY
Trigger: ATAAGCCGGTGTCTGATATCAGGTACATCTCCGATG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACGCTCATCATCTGTCTaGATCACAGGGTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLARSSSV*ITGYFA
Trigger: GGCAAAATACCCTGTGATTCAGACAGATGATGAGCG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIQLFVL*KLVLEH
Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTTCCTCAGGACAGCCTaGACTTCTGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEFLRTA*TSADSS
Trigger: AGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATTCCTCAGGACAGCCTaGACTTCTGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALFLRTA*TSADSS
Trigger: AGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTTCCTCAGGACAGCCTaGACTTCTGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTFLRTA*TSADSS
Trigger: AGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALNRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAACCAATTGGAAGCTaGTTTGGGAAGCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKPIGS*FGKRLL
Trigger: AAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGCCACAGAGCCACAGTaGAGCACCAGGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACATEPQ*STRLRP
Trigger: TGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGCTGAGGCAGGAAAATaGCGTGAACTTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQAEAGK*RELGRR
Trigger: CCGCCTCCCAAGTTCACGTCATTTTCCTGCCTCAGC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRITGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAAGATGAAGCATCCCTaGTGGGCACAGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEKMKHP*WAQWLT
Trigger: TGTGAGCCACTGTGCCCAGCAGGGATGCTTCATCTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAATAGGGCAGGTCGCTTaGGACCTCATCGTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQIGQVA*DLIVAP
Trigger: AGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTAT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGGTGGGTTCTTATGGTaGTATCTTGATAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAGGFLW*YLDRAG
Trigger: ACCTGCCCTATCAAGATACCACCATAAGAACCCACC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTACTGGTTTGAGATCTaGCGCTATAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIYWFEI*RYSWFF
Trigger: GAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTTTAGGAATGTGGCCTaGGGGGATGTGTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTFRNVA*GDVSTQ
Trigger: CTGAGTGGACACATCCCCCCAGGCCACATTCCTAAA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATTTAGGAATGTGGCCTaGGGGGATGTGTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALFRNVA*GDVSTQ
Trigger: CTGAGTGGACACATCCCCCCAGGCCACATTCCTAAA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACWRGWW*TLHSIG
Trigger: TCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAQLFVL*KLVLEH
Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTGTCGGCTTTCCGAATaGTGTGGCAATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTCRLSE*CGNLLI
Trigger: GATGAGCAGATTGCCACATCATTCGGAAAGCCGACA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTGTCGGCTTTCCGAATaGTGTGGCAATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTECRLSE*CGNLLI
Trigger: GATGAGCAGATTGCCACATCATTCGGAAAGCCGACA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAAACCAATTGGAAGCTaGTTTGGGAAGCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAKPIGS*FGKRLL
Trigger: AAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGACCAGGCTAAGGCCATaGGTTAACACCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTETRLRP*VNTTNQ
Trigger: CTGGTTTGTGGTGTTAACTCATGGCCTTAGCCTGGT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGCCACAGAGCCACAGTaGAGCACCAGGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKATEPQ*STRLRP
Trigger: TGGCCTTAGCCTGGTGCTTCACTGTGGCTCTGTGGC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGCAGAGGCTGCAGTaGGCCAAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQRQRLQ*AKIIPL
Trigger: CAGTGGTATGATCTTGGCTCACTGCAGCCTCTGCCT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGGTGCTCTTCTTAAGTaGAATGTTAACACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAGALLK*NVNTGL
Trigger: GAGCCCTGTGTTAACATTTCACTTAAGAAGAGCACC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCAGGCAGAGGTTGCAGTaGGTCGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACRQRLQ*VEIAPL
Trigger: CAGTGGCGCAATCTCGACTCACTGCAACCTCTGCCT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCATCCCGGGGAAACACTaGGTCAGCCTCTTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACIPGKH*VSLFPG
Trigger: TCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGAT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCACCAACGCCTCCCATaGCATACGGTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEHQRLP*HTVVNI
Trigger: GATATTCACAACCGTATGGCATGGGAGGCGTTGGTG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGCCCCCATACATACTaGCCAATCCACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQSPHTY*PIHQRL
Trigger: GAGGCGTTGGTGGATTGGGCAGTATGTATGGGGGCT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKQEDH*SYLSSF
Trigger: GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCAATCTGCTCATCACTaGATCCAGCTCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIQSAHH*IQLIKL
Trigger: AAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGTGAGCCGAGATTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQSEPRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGATTTGGGAAGCGCTTaGTTCTCTACCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEDLGSA*FSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCCCGAGATCGCACCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACPRSHH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGTGCGATCTCGG...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCATAGGGCAGGTCGCTTaGGACCTCATCGTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACIGQVA*DLIVAP
Trigger: AGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTAT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATGGGAGAGGGGGTGGTaGCAAGGGATCAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPWERGW*QGISAH
Trigger: GTGAGCGCTGATCCCTTGCCACCACCCCCTCTCCCA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATACTGGTTTGAGATCTaGCGCTATAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAYWFEI*RYSWFF
Trigger: GAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTCATTCACATAGACTATaGCTGCGGCCATATACAAAA +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPHSHRL*LRPYTK
Trigger: TTTTGTATATGGCCGCAGCCATAGTCTATGTGAATG...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAGAGGCCACCTCGGTTaGTATCATTCACATAGACTA +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLARGHLG*YHSHRL
Trigger: TAGTCTATGTGAATGATACCAACCGAGGTGGCCTCT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTTGTCTGTCACCACTaGTGGCCATTTCACACATTT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIFVCHH*WPFHTF
Trigger: AAATGTGTGAAATGGCCACCAGTGGTGACAGACAAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000611064.4
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGGAAATGCTACATTGTaGGACTGTAGCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIGNATL*DCSMYV
Trigger: GACATACATGCTACAGTCCCACAATGTAGCATTTCC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGTCTGTCACCACTGGTaGCCATTTCACACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALVCHHW*PFHTPV
Trigger: AACAGGAGTGTGAAATGGCCACCAGTGGTGACAGAC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000454295.6
ENST00000614617.4
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTTCTTCTGTGTCACTTaGGTAGAAGTCTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEFFCVT*VEVWAE
Trigger: TTCGGCCCAGACTTCTACTCAAGTGACACAGAAGAA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTTCTTCTGTGTCACTTaGGTAGAAGTCTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTFFCVT*VEVWAE
Trigger: TTCGGCCCAGACTTCTACTCAAGTGACACAGAAGAA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATTCTTCTGTGTCACTTaGGTAGAAGTCTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALFFCVT*VEVWAE
Trigger: TTCGGCCCAGACTTCTACTCAAGTGACACAGAAGAA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCCATCGGAGATGTACCTaGTATCAGACACCGGCTTAT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTHRRCT*YQTPAY
Trigger: ATAAGCCGGTGTCTGATATCAGGTACATCTCCGATG...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACDLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTETKGSF*PSVGIF
Trigger: AAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTTKGSF*PSVGIF
Trigger: AAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALCECKL*HKQRHR
Trigger: CCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCATGCCATACGGTTGTaGATATCCAAACAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIHAIRL*ISKQVV
Trigger: TACAACTTGTTTGGATATTCACAACCGTATGGCATG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCGCTCATCATCTGTCTaGATCACAGGGTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTERSSSV*ITGYFA
Trigger: GGCAAAATACCCTGTGATTCAGACAGATGATGAGCG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACGCTCATCATCTGTCTaGATCACAGGGTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALRSSSV*ITGYFA
Trigger: GGCAAAATACCCTGTGATTCAGACAGATGATGAGCG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATTCCTCAGGACAGCCTaGACTTCTGCAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQFLRTA*TSADSS
Trigger: AGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWNRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTCACATAGACTATGGCTaGGGCCATATACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPHIDYG*GHIQNK
Trigger: TTTATTTTGTATATGGCCGCAGCCATAGTCTATGTG...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAKQEDH*SYLSSF
Trigger: GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGCCGAGATCGCACCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLPRSHH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGTGCGATCTCGG...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCAAACCAAAGCAATACTaGCCAATCCACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTKPKQY*PIHQRL
Trigger: GAGGCGTTGGTGGATTGGGCAGTATTGCTTTGGTTT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436532.7
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALACPDS*IFHHLT
Trigger: TGTCAAATGATGGAAGATCCAGGAATCGGGACAGGC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGATAGGGCAGGTCGCTTaGGACCTCATCGTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLIGQVA*DLIVAP
Trigger: AGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTAT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGGTGGGTTCTTATGGTaGTATCTTGATAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALGGFLW*YLDRAG
Trigger: ACCTGCCCTATCAAGATACCACCATAAGAACCCACC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGGTGGGTTCTTATGGTaGTATCTTGATAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTGGFLW*YLDRAG
Trigger: ACCTGCCCTATCAAGATACCACCATAAGAACCCACC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGGTGGGTTCTTATGGTaGTATCTTGATAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEGGFLW*YLDRAG
Trigger: ACCTGCCCTATCAAGATACCACCATAAGAACCCACC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGACAAAGCGCCTTACTaGTTTGAGATCTGGCGCTAT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEDKAPY*FEIWRY
Trigger: ATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGACAAAGCGCCTTACTaGTTTGAGATCTGGCGCTAT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALDKAPY*FEIWRY
Trigger: ATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGACAAAGCGCCTTACTaGTTTGAGATCTGGCGCTAT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTDKAPY*FEIWRY
Trigger: ATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGGGCGAACGGTGGTTTaGTCTTGCTGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPGRTVV*SCWRGW
Trigger: CCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTGAGGGGCGAACGGTaGTTTGGTCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACLRGER*FGLAGE
Trigger: CTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGTCTGTCACCACTGGTaGCCATTTCACACATTTTCC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALVCHHW*PFHTFS
Trigger: GGAAAATGTGTGAAATGGCCACCAGTGGTGACAGAC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGCTTTCCGAATGATGTaGCAATCTGCTCATCACTGC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTAFRMM*QSAHHC
Trigger: GCAGTGATGAGCAGATTGCCACATCATTCGGAAAGC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAATTGGAAGCTGATTTaGGAAGCGCTTGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLANWKLI*EALASL
Trigger: TAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGGGCAGGCTGGACTATaGGGAGATGGAGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACGQAGL*GDGEMY
Trigger: GTACATCTCTCCATCTCCCCATAGTCCAGCCTGCCC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGTGTCCAGGGCAGGCTaGACTATGGGGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLVSRAG*TMGRWR
Trigger: TCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACAC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTCCCAGCTACTCAGGTaGCTGAGGTATAGACCGCTT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWSQLLR*LRYRPL
Trigger: AAGCGGTCTATACCTCAGCCACCTGAGTAGCTGGGA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLDLCRS*GANGGL
Trigger: CAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCCAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTQLFVL*KLVLEH
Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALQLFVL*KLVLEH
Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTGTCGGCTTTCCGAATaGTGTGGCAATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWCRLSE*CGNLLI
Trigger: GATGAGCAGATTGCCACATCATTCGGAAAGCCGACA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCAACAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACNRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAAACCAATTGGAAGCTaGTTTGGGAAGCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEKPIGS*FGKRLL
Trigger: AAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGAAATTGGTCACAGATaGAAGATGAACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRIEIGHR*KMNTGF
Trigger: AAATCCTGTGTTCATCTTTCATCTGTGACCAATTTC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAACCAGGCTAAGGCCATaGGTTAACACCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQTRLRP*VNTTNQ
Trigger: CTGGTTTGTGGTGTTAACTCATGGCCTTAGCCTGGT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAAGGCAGAGGCTGCAGTaGGCCAAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKRQRLQ*AKIIPL
Trigger: CAGTGGTATGATCTTGGCTCACTGCAGCCTCTGCCT...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGCACACGGCAGGTGACTaGAACTTTAATGCACCTAGG +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWHTAGD*NFNAPR
Trigger: CCTAGGTGCATTAAAGTTTCAGTCACCTGCCGTGTG...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATGTGATTTTCACACCTaGGCAGCCGCCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKCDFHT*AAARKS
Trigger: GCTCTTCCTGGCGGCTGCGCAGGTGTGAAAATCACA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGAGTGAGCCGAGATTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLSEPRL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALTGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTETGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAACTTGCCCATCACACTaGCAGGATACGATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALTCPSH*QDTISK
Trigger: TTTAGAGATCGTATCCTGGCAGTGTGATGGGCAAGT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACTTGCCCATCACACTaGCAGGATACGATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTTCPSH*QDTISK
Trigger: TTTAGAGATCGTATCCTGGCAGTGTGATGGGCAAGT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATCGAGATTGCGCCACTaGACTCCAGCCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPSRLRH*TPAWLT
Trigger: TGTCAGCCAGGCTGGAGTGCAGTGGCGCAATCTCGA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTACTGGTTTGAGATCTaGCGCTATAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTYWFEI*RYSWFF
Trigger: GAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATGGTCCGGTAATACATaGACATGCCAAGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALWSGNT*TCQEPE
Trigger: TTCTGGTTCTTGGCATGTCCATGTATTACCGGACCA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTGGTCCGGTAATACATaGACATGCCAAGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTWSGNT*TCQEPE
Trigger: TTCTGGTTCTTGGCATGTCCATGTATTACCGGACCA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACATTCACATAGACTATaGCTGCGGCCATATACAAAA +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAHSHRL*LRPYTK
Trigger: TTTTGTATATGGCCGCAGCCATAGTCTATGTGAATG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAGAGGCCACCTCGGTTaGTATCATTCACATAGACTA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALRGHLG*YHSHRL
Trigger: TAGTCTATGTGAATGATACCAACCGAGGTGGCCTCT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCAGAGGCCACCTCGGTTaGTATCATTCACATAGACTA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTRGHLG*YHSHRL
Trigger: TAGTCTATGTGAATGATACCAACCGAGGTGGCCTCT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAGAGGCCACCTCGGTTaGTATCATTCACATAGACTA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTERGHLG*YHSHRL
Trigger: TAGTCTATGTGAATGATACCAACCGAGGTGGCCTCT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAGACACTTGGGCTTTTaGTTAAGTAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALRHLGF*LSRLGL
Trigger: CAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAGACACTTGGGCTTTTaGTTAAGTAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTERHLGF*LSRLGL
Trigger: CAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCAGACACTTGGGCTTTTaGTTAAGTAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTRHLGF*LSRLGL
Trigger: CAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGTGTCCAGGGCAGGCTaGACTATGGGGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPVSRAG*TMGRWR
Trigger: TCTCCATCTCCCCATAGTCCAGCCTGCCCTGGACAC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 72 bp AATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGC +
Preference number: 4 (lower is better)
Translates to: NVAYWLNQLEAD*GSACFSTTEAS
Trigger: GCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 72 bp AAAGGCACCAGACACTTGGGCTTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGACCTTTTCTTGAGACTC +
Preference number: 4 (lower is better)
Translates to: KGTRHLGFWLSR*GLLIKDLFLRL
Trigger: GAGTCTCAAGAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATTCTTCTGTGTCACTTaGGTAGAAGTCTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQFFCVT*VEVWAE
Trigger: TTCGGCCCAGACTTCTACTCAAGTGACACAGAAGAA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWTKGSF*PSVGIF
Trigger: AAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGCGCTCATCATCTGTCTaGATCACAGGGTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWRSSSV*ITGYFA
Trigger: GGCAAAATACCCTGTGATTCAGACAGATGATGAGCG...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTGTCGGCTTTCCGAATaGTGTGGCAATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACCRLSE*CGNLLI
Trigger: GATGAGCAGATTGCCACATCATTCGGAAAGCCGACA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCACCAGGCTAAGGCCATaGGTTAACACCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACTRLRP*VNTTNQ
Trigger: CTGGTTTGTGGTGTTAACTCATGGCCTTAGCCTGGT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACYSQQA*PRLHVG
Trigger: TCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAAGCCCCCATACATACTaGCCAATCCACCAACGCCTC +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPSPHTY*PIHQRL
Trigger: GAGGCGTTGGTGGATTGGGCAGTATGTATGGGGGCT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACACATAGACTATGGCTaGGGCCATATACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: TNWKLIWEALASLPQRLAHIDYG*GHIQNK
Trigger: TTTATTTTGTATATGGCCGCAGCCATAGTCTATGTG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATACCCGGCAGAACACTaGATTCACTGGTGTATTAAA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALYPAEH*IHWCIK
Trigger: TTTAATACACCAGTGAATGCAGTGTTCTGCCGGGTA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALKQEDH*SYLSSF
Trigger: GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEKQEDH*SYLSSF
Trigger: GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCAATCTGCTCATCACTaGATCCAGCTCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEQSAHH*IQLIKL
Trigger: AAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCCAATCTGCTCATCACTaGATCCAGCTCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTQSAHH*IQLIKL
Trigger: AAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTG...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGATTTGGGAAGCGCTTaGTTCTCTACCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACDLGSA*FSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAAAGATGAAGCATCCCTaGTGGGCACAGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKKMKHP*WAQWLT
Trigger: TGTGAGCCACTGTGCCCAGCAGGGATGCTTCATCTT...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWACPDS*IFHHLT
Trigger: TGTCAAATGATGGAAGATCCAGGAATCGGGACAGGC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGGTGGGTTCTTATGGTaGTATCTTGATAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWGGFLW*YLDRAG
Trigger: ACCTGCCCTATCAAGATACCACCATAAGAACCCACC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATTGAGGGGCGAACGGTaGTTTGGTCTTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPLRGER*FGLAGE
Trigger: CTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTTTGTCTGTCACCACTaGTGGCCATTTCACACATTT +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEFVCHH*WPFHTF
Trigger: AAATGTGTGAAATGGCCACCAGTGGTGACAGACAAA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATTTGTCTGTCACCACTaGTGGCCATTTCACACATTT +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALFVCHH*WPFHTF
Trigger: AAATGTGTGAAATGGCCACCAGTGGTGACAGACAAA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATTTAGGAATGTGGCCTaGGGGGATGTGTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKFRNVA*GDVSTQ
Trigger: CTGAGTGGACACATCCCCCCAGGCCACATTCCTAAA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTTTAGGAATGTGGCCTaGGGGGATGTGTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLFRNVA*GDVSTQ
Trigger: CTGAGTGGACACATCCCCCCAGGCCACATTCCTAAA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAATTGGAAGCTGATTTaGGAAGCGCTTGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTENWKLI*EALASL
Trigger: TAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCTGAAAATGTTGATCTaGGATTCAAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RTPVIPATGEANCLNRRILKMLI*DSNTFQ
Trigger: TTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGGAAATGCTACATTGTaGGACTGTAGCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALGNATL*DCSMYV
Trigger: GACATACATGCTACAGTCCCACAATGTAGCATTTCC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGGAAATGCTACATTGTaGGACTGTAGCATGTATGTC +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEGNATL*DCSMYV
Trigger: GACATACATGCTACAGTCCCACAATGTAGCATTTCC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTTTGTCTGTCACCACTaGTGGCCATTTCACACTCCT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWFVCHH*WPFHTP
Trigger: AGGAGTGTGAAATGGCCACCAGTGGTGACAGACAAA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000454295.6
ENST00000614617.4
ENST00000647531.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTCCCAGCTACTCAGGTaGCTGAGGTATAGACCGCTT +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLSQLLR*LRYRPL
Trigger: AAGCGGTCTATACCTCAGCCACCTGAGTAGCTGGGA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACTKGSF*PSVGIF
Trigger: AAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACCECKL*HKQRHR
Trigger: CCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCCATGCCATACGGTTGTaGATATCCAAACAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTHAIRL*ISKQVV
Trigger: TACAACTTGTTTGGATATTCACAACCGTATGGCATG...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACATGCCATACGGTTGTaGATATCCAAACAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALHAIRL*ISKQVV
Trigger: TACAACTTGTTTGGATATTCACAACCGTATGGCATG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCATGCCATACGGTTGTaGATATCCAAACAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEHAIRL*ISKQVV
Trigger: TACAACTTGTTTGGATATTCACAACCGTATGGCATG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGACCAGGCTAAGGCCATaGGTTAACACCACAAACCAG +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLTRLRP*VNTTNQ
Trigger: CTGGTTTGTGGTGTTAACTCATGGCCTTAGCCTGGT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGAGGGAGTGCATTCAGTaGCCACAACTTTCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWRECIQ*PQLSKL
Trigger: AAGCTTAGAAAGTTGTGGTCACTGAATGCACTCCCT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAATGCACCTAGGGATTaGCCACAACATTTACAAATC +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALNAPRD*PQHLQI
Trigger: GATTTGTAAATGTTGTGGTCAATCCCTAGGTGCATT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACACACGGCAGGTGACTaGAACTTTAATGCACCTAGG +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKHTAGD*NFNAPR
Trigger: CCTAGGTGCATTAAAGTTTCAGTCACCTGCCGTGTG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACACCAACGCCTCCCATaGCATACGGTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKHQRLP*HTVVNI
Trigger: GATATTCACAACCGTATGGCATGGGAGGCGTTGGTG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAACTGGGGAGGCTAATTaGTTGAACAGGAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQTGEAN*LNRRIA
Trigger: AGCAATTCTCCTGTTCAAGCAATTAGCCTCCCCAGT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGACTTGCCCATCACACTaGCAGGATACGATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWTCPSH*QDTISK
Trigger: TTTAGAGATCGTATCCTGGCAGTGTGATGGGCAAGT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACACPDS*IFHHLT
Trigger: TGTCAAATGATGGAAGATCCAGGAATCGGGACAGGC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATGGTCCGGTAATACATaGACATGCCAAGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQWSGNT*TCQEPE
Trigger: TTCTGGTTCTTGGCATGTCCATGTATTACCGGACCA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGTGGTCCGGTAATACATaGACATGCCAAGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWWSGNT*TCQEPE
Trigger: TTCTGGTTCTTGGCATGTCCATGTATTACCGGACCA...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCATTCACATAGACTATaGCTGCGGCCATATACAAAA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEHSHRL*LRPYTK
Trigger: TTTTGTATATGGCCGCAGCCATAGTCTATGTGAATG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGAGAGGCCACCTCGGTTaGTATCATTCACATAGACTA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWRGHLG*YHSHRL
Trigger: TAGTCTATGTGAATGATACCAACCGAGGTGGCCTCT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGTCTGTCACCACTGGTaGCCATTTCACACATTTTCC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACVCHHW*PFHTFS
Trigger: GGAAAATGTGTGAAATGGCCACCAGTGGTGACAGAC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATTTAGGAATGTGGCCTaGGGGGATGTGTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPFRNVA*GDVSTQ
Trigger: CTGAGTGGACACATCCCCCCAGGCCACATTCCTAAA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGCTTTCCGAATGATGTaGCAATCTGCTCATCACTGC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACAFRMM*QSAHHC
Trigger: GCAGTGATGAGCAGATTGCCACATCATTCGGAAAGC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGTCTGTCACCACTGGTaGCCATTTCACACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKVCHHW*PFHTPV
Trigger: AACAGGAGTGTGAAATGGCCACCAGTGGTGACAGAC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454295.6
ENST00000614617.4
3UTR CAA 72 bp ACCAGACACTTGGGCTTTTGGTTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTCTTGAGACTCATTCTT +
Preference number: 4 (lower is better)
Translates to: TRHLGFWLSRLG*LIKDLFLRLIL
Trigger: AAGAATGAGTCTCAAGAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKCECKL*HKQRHR
Trigger: CCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLCECKL*HKQRHR
Trigger: CCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGCGCTCATCATCTGTCTaGATCACAGGGTATTTTGCC +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLRSSSV*ITGYFA
Trigger: GGCAAAATACCCTGTGATTCAGACAGATGATGAGCG...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCAAACCAATTGGAAGCTaGTTTGGGAAGCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACKPIGS*FGKRLL
Trigger: AAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGAAATTGGTCACAGATaGAAGATGAACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTEIGHR*KMNTGF
Trigger: AAATCCTGTGTTCATCTTTCATCTGTGACCAATTTC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGGTGCTCTTCTTAAGTaGAATGTTAACACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACGALLK*NVNTGL
Trigger: GAGCCCTGTGTTAACATTTCACTTAAGAAGAGCACC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCACACCAACGCCTCCCATaGCATACGGTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPHQRLP*HTVVNI
Trigger: GATATTCACAACCGTATGGCATGGGAGGCGTTGGTG...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACACATAGACTATGGCTaGGGCCATATACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: NWKLIWEALASLPQRLALHIDYG*GHIQNK
Trigger: TTTATTTTGTATATGGCCGCAGCCATAGTCTATGTG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCACATAGACTATGGCTaGGGCCATATACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEHIDYG*GHIQNK
Trigger: TTTATTTTGTATATGGCCGCAGCCATAGTCTATGTG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATACCCGGCAGAACACTaGATTCACTGGTGTATTAAA +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQYPAEH*IHWCIK
Trigger: TTTAATACACCAGTGAATGCAGTGTTCTGCCGGGTA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWKQEDH*SYLSSF
Trigger: GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTT...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGCAATCTGCTCATCACTaGATCCAGCTCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWQSAHH*IQLIKL
Trigger: AAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTG...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAACAATCTGCTCATCACTaGATCCAGCTCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQQSAHH*IQLIKL
Trigger: AAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTG...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGATTTGGGAAGCGCTTaGTTCTCTACCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPDLGSA*FSTTEA
Trigger: AGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACA +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKACPDS*IFHHLT
Trigger: TGTCAAATGATGGAAGATCCAGGAATCGGGACAGGC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTACTGGTTTGAGATCTaGCGCTATAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACYWFEI*RYSWFF
Trigger: GAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGACAAAGCGCCTTACTaGTTTGAGATCTGGCGCTAT +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLDKAPY*FEIWRY
Trigger: ATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGTCTGTCACCACTGGTaGCCATTTCACACATTTTCC +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLVCHHW*PFHTFS
Trigger: GGAAAATGTGTGAAATGGCCACCAGTGGTGACAGAC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325631.10
ENST00000645446.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGCTTTCCGAATGATGTaGCAATCTGCTCATCACTGC +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLAFRMM*QSAHHC
Trigger: GCAGTGATGAGCAGATTGCCACATCATTCGGAAAGC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAATTGGAAGCTGATTTaGGAAGCGCTTGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQNWKLI*EALASL
Trigger: TAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTTTGTCTGTCACCACTaGTGGCCATTTCACACTCCT +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLFVCHH*WPFHTP
Trigger: AGGAGTGTGAAATGGCCACCAGTGGTGACAGACAAA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454295.6
ENST00000614617.4
ENST00000647531.1
CDS-3UTR TCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPCECKL*HKQRHR
Trigger: CCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAACATGCCATACGGTTGTaGATATCCAAACAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQHAIRL*ISKQVV
Trigger: TACAACTTGTTTGGATATTCACAACCGTATGGCATG...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAAGGGAGTGCATTCAGTaGCCACAACTTTCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKRECIQ*PQLSKL
Trigger: AAGCTTAGAAAGTTGTGGTCACTGAATGCACTCCCT...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTACCCGGCAGAACACTaGATTCACTGGTGTATTAAA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACYPAEH*IHWCIK
Trigger: TTTAATACACCAGTGAATGCAGTGTTCTGCCGGGTA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACKQEDH*SYLSSF
Trigger: GAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGATATTTTCAAGAACATaGACAGTGAACACAGGAATG +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTEIFSRT*TVNTGM
Trigger: CATTCCTGTGTTCACTGTGCATGTTCTTGAAAATAT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCATATTTTCAAGAACATaGACAGTGAACACAGGAATG +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTIFSRT*TVNTGM
Trigger: CATTCCTGTGTTCACTGTGCATGTTCTTGAAAATAT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTACTGGTTTGAGATCTaGCGCTATAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLYWFEI*RYSWFF
Trigger: GAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATGGTCCGGTAATACATaGACATGCCAAGAACCAGAA +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKWSGNT*TCQEPE
Trigger: TTCTGGTTCTTGGCATGTCCATGTATTACCGGACCA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTTGTCTGTCACCACTaGTGGCCATTTCACACATTT +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACFVCHH*WPFHTF
Trigger: AAATGTGTGAAATGGCCACCAGTGGTGACAGACAAA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000622835.4
ENST00000645446.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGCTTTCCGAATGATGTaGCAATCTGCTCATCACTGC +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPAFRMM*QSAHHC
Trigger: GCAGTGATGAGCAGATTGCCACATCATTCGGAAAGC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCCTGAAAATGTTGATCTaGGATTCAAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: AYWLNQLEADLGSACFSTLKMLI*DSNTFQ
Trigger: TTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAG...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGCTGAAAATGTTGATCTaGGATTCAAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: WLNQLEADLGSACFSTTELKMLI*DSNTFQ
Trigger: TTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAG...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCACAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPQLFVL*KLVLEH
Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAACATGATAGATGCTGCTaGATAAAATCCAACAAGAAC +
Preference number: 4 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQHDRCC*IKSNKN
Trigger: GTTCTTGTTGGATTTTATTCAGCAGCATCTATCATG...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAAGGGAGTGCATTCAGTaGCCACAACTTTCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPRECIQ*PQLSKL
Trigger: AAGCTTAGAAAGTTGTGGTCACTGAATGCACTCCCT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCAATGCACCTAGGGATTaGCCACAACATTTACAAATC +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACNAPRD*PQHLQI
Trigger: GATTTGTAAATGTTGTGGTCAATCCCTAGGTGCATT...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGCAATCTGCTCATCACTaGATCCAGCTCATCAAACTT +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLQSAHH*IQLIKL
Trigger: AAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTG...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCCATTCACATAGACTATaGCTGCGGCCATATACAAAA +
Preference number: 4 (lower is better)
Translates to: FNVAYWLNQLEADLGSACHSHRL*LRPYTK
Trigger: TTTTGTATATGGCCGCAGCCATAGTCTATGTGAATG...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGAATTGGAAGCTGATTTaGGAAGCGCTTGCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLNWKLI*EALASL
Trigger: TAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAAGACACTTGGGCTTTTaGTTAAGTAGGTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPRHLGF*LSRLGL
Trigger: CAAGCCCAACCTACTTAACCAAAAGCCCAAGTGTCT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGAATGCACCTAGGGATTaGCCACAACATTTACAAATC +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLNAPRD*PQHLQI
Trigger: GATTTGTAAATGTTGTGGTCAATCCCTAGGTGCATT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGCATTCACATAGACTATaGCTGCGGCCATATACAAAA +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLHSHRL*LRPYTK
Trigger: TTTTGTATATGGCCGCAGCCATAGTCTATGTGAATG...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CCA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGCTGAAAATGTTGATCTaGGATTCAAACACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWLKMLI*DSNTFQ
Trigger: TTGAAAGGTGTTTGAATCCCAGATCAACATTTTCAG...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
3UTR CAA 72 bp AGTAAAATCTTTAATGTTGCATACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: SKIFNVAYWLNQ*EADLGSACFST
Trigger: GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAAGATTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGAAATTGGTCACAGATaGAAGATGAACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKEIGHR*KMNTGF
Trigger: AAATCCTGTGTTCATCTTTCATCTGTGACCAATTTC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGAAATTGGTCACAGATaGAAGATGAACACAGGATTT +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLEIGHR*KMNTGF
Trigger: AAATCCTGTGTTCATCTTTCATCTGTGACCAATTTC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR TCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACATGATAGATGCTGCTaGATAAAATCCAACAAGAAC +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKHDRCC*IKSNKN
Trigger: GTTCTTGTTGGATTTTATTCAGCAGCATCTATCATG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACACATAGACTATGGCTaGGGCCATATACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKHIDYG*GHIQNK
Trigger: TTTATTTTGTATATGGCCGCAGCCATAGTCTATGTG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR TCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCACATGATAGATGCTGCTaGATAAAATCCAACAAGAAC +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPHDRCC*IKSNKN
Trigger: GTTCTTGTTGGATTTTATTCAGCAGCATCTATCATG...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR GCA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCACACATAGACTATGGCTaGGGCCATATACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPHIDYG*GHIQNK
Trigger: TTTATTTTGTATATGGCCGCAGCCATAGTCTATGTG...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR GCA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGATATTTTCAAGAACATaGACAGTGAACACAGGAATG +
Preference number: 4 (lower is better)
Translates to: TERLSNLPKIRMSENVDLIFSRT*TVNTGM
Trigger: CATTCCTGTGTTCACTGTGCATGTTCTTGAAAATAT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS CCA 90 bp TCCTCGGTTCTGCCCGCGCCGGCTAGGCGTTCGTCTTCGCGTTTCTaGCTGAAACCCACTGTCTTTGGAGATTCCGACCCAACGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SSVLPAPARRSSSRF*LKPTVFGDSDPTRP
Trigger: CGGCCTCGTTGGGTCGGAATCTCCAAAGACAGTGGGTTTCAGCCAGAAACGCGAAGACGAACGCCTAGCCGGCGCGGGCAGAACCGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS TCA 90 bp CGGTTCTGCCCGCGCCGGCTAGGCGTTCGTCTTCGCGTTTCTGGCTaGAACCCACTGTCTTTGGAGATTCCGACCCAACGAGGCCGAAAC +
Preference number: 5 (lower is better)
Translates to: RFCPRRLGVRLRVSG*NPLSLEIPTQRGRN
Trigger: GTTTCGGCCTCGTTGGGTCGGAATCTCCAAAGACAGTGGGTTTCAGCCAGAAACGCGAAGACGAACGCCTAGCCGGCGCGGGCAGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTGATAGGGCAGGTCGCTaGGGACCTCATCGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPDRAGR*GPHRSA
Trigger: GGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATC...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS TCA 90 bp GTTGAGGGGCGAACGGTGGTTTGGTCTTGCTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGAGATGTACCTGATATCAGACACCGG +
Preference number: 5 (lower is better)
Translates to: VEGRTVVWSCWRGWW*TLHSIGDVPDIRHR
Trigger: CCGGTGTCTGATATCAGGTACATCTCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 90 bp GGGAAACACTGCGTCAGCCTCTTTCCGGGAACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTTGCAGGAGTTGAGGGGCGAACGGTG +
Preference number: 5 (lower is better)
Translates to: GKHCVSLFPGTKGSF*PSVGIFAGVEGRTV
Trigger: CACCGTTCGCCCCTCAACTCCTGCAAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGTTCCCGGAAAGAGGCTGACGCAGTGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGATAGGGCAGGTCGCTaGGGACCTCATCGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIDRAGR*GPHRSA
Trigger: GGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGGGGCGAACGGTGGTTaGGTCTTGCTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIGANGG*VLLERL
Trigger: CAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCCC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGATAGGGCAGGTCGCTaGGGACCTCATCGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLADRAGR*GPHRSA
Trigger: GGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAACGGTGGTTTGGTCTaGCTGGAGAGGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRINGGLV*LERLVV
Trigger: CACCACCAGCCTCTCCAGCAAGACCAAACCACCGTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 90 bp CTGGAGAGGCTGGTGGTGAACACTCCACTCCATCGGAGATGTACCTaGTATCAGACACCGGCTTATCCCATTCGGGGTCCTTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LERLVVNTPLHRRCT*YQTPAYPIRGPFSS
Trigger: GGAAGAAAAAGGACCCCGAATGGGATAAGCCGGTGTCTGATATCAGGTACATCTCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CCA 90 bp AGGGCAGGTCGCTTGGGACCTCATCGTAGCGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACATTTGTGATTTTCACACCTGCGCAG +
Preference number: 5 (lower is better)
Translates to: RAGRLGPHRSACPDS*IFHHLTFVIFTPAQ
Trigger: CTGCGCAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
CDS CCA 90 bp AGGGCAGGTCGCTTGGGACCTCATCGTAGCGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACATTTGTGATTTTCACACCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: RAGRLGPHRSACPDS*IFHHLTFVIFTPAS
Trigger: GGACGCAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515844.1
ENST00000611349.1
CDS CCA 90 bp AGGGCAGGTCGCTTGGGACCTCATCGTAGCGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACATTTGTGATTTTCACACCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RAGRLGPHRSACPDS*IFHHLTFVIFTPVA
Trigger: GGCCACAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGATAGGGCAGGTCGCTaGGGACCTCATCGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALDRAGR*GPHRSA
Trigger: GGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGATAGGGCAGGTCGCTaGGGACCTCATCGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEDRAGR*GPHRSA
Trigger: GGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAAACGGTGGTTTGGTCTaGCTGGAGAGGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLANGGLV*LERLVV
Trigger: CACCACCAGCCTCTCCAGCAAGACCAAACCACCGTT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGGGGCGAACGGTGGTTaGGTCTTGCTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEGANGG*VLLERL
Trigger: CAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCCC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGGGGCGAACGGTGGTTaGGTCTTGCTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALGANGG*VLLERL
Trigger: CAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCCC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGGATCTTTGCAGGAGTaGAGGGGCGAACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIGSLQE*RGERWF
Trigger: AAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGGATCTTTGCAGGAGTaGAGGGGCGAACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLAGSLQE*RGERWF
Trigger: AAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS CCA 90 bp AGGGCAGGTCGCTTGGGACCTCATCGTAGCGCCTGTCCCGATTCCTaGATCTTCCATCATTTGACATTTGTGATTTTCACACCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: RAGRLGPHRSACPDS*IFHHLTFVIFTPGL
Trigger: TAAGCCAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTCTTATGGTGGTATCTaGATAGGGCAGGTCGCTTGG +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRISYGGI*IGQVAW
Trigger: CCAAGCGACCTGCCCTATCAAGATACCACCATAAGA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGTTCTTCTGTGTCACTaGAGTAGAAGTCTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIVLLCH*SRSLGR
Trigger: TCGGCCCAGACTTCTACTCAAGTGACACAGAAGAAC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAGCGCCTTACTGGTTaGAGATCTGGCGCTATAGCT +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKRLTG*RSGAIA
Trigger: AGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCAACGGTGGTTTGGTCTaGCTGGAGAGGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTNGGLV*LERLVV
Trigger: CACCACCAGCCTCTCCAGCAAGACCAAACCACCGTT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAACGGTGGTTTGGTCTaGCTGGAGAGGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTENGGLV*LERLVV
Trigger: CACCACCAGCCTCTCCAGCAAGACCAAACCACCGTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGGGGCGAACGGTGGTTaGGTCTTGCTGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWGANGG*VLLERL
Trigger: CAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCCC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLAELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 90 bp ATCCAAACAAGTTGTACCACTCACTGTCCTTGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGGCCCCCAAAAGCAGCTCCACCACAC +
Preference number: 5 (lower is better)
Translates to: IQTSCTTHCPCECKL*HKQRHRPPKAAPPH
Trigger: GTGTGGTGGAGCTGCTTTTGGGGGCCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACAAGGACAGTGAGTGGTACAACTTGTTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 90 bp ATGTTCCTGTCGGCTTTCCGAATGATGTGGCAATCTGCTCATCACTaGATCCAGCTCATCAAACTTCCTCAGGACAGCCTGAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: MFLSAFRMMWQSAHH*IQLIKLPQDSLNFC
Trigger: GCAGAAGTTCAGGCTGTCCTGAGGAAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTGCCACATCATTCGGAAAGCCGACAGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATCTTATGGTGGTATCTaGATAGGGCAGGTCGCTTGG +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLASYGGI*IGQVAW
Trigger: CCAAGCGACCTGCCCTATCAAGATACCACCATAAGA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGGATCTTTGCAGGAGTaGAGGGGCGAACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTGSLQE*RGERWF
Trigger: AAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGGATCTTTGCAGGAGTaGAGGGGCGAACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEGSLQE*RGERWF
Trigger: AAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGGATCTTTGCAGGAGTaGAGGGGCGAACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALGSLQE*RGERWF
Trigger: AAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGAATCACAGGGTATTTaGCCACATAGTCGGGCATCA +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIESQGI*PHSRAS
Trigger: TGATGCCCGACTATGTGGCAAAATACCCTGTGATTC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTCAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAAGTAGCACCAGAATaGATGGTCCACTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKVAPE*MVHLPI
Trigger: GATGGGCAAGTGGACCATCAATTCTGGTGCTACTTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTAAAGGCACCAGACACTaGGGCTTTTGGTTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIKGTRH*GFWLSR
Trigger: CCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 90 bp CTGCTCATCACTGCATCCAGCTCATCAAACTTCCTCAGGACAGCCTaGACTTCTGCAGACAGCTCTTTGTACTCTGAAAACTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LLITASSSSNFLRTA*TSADSSLYSENWSW
Trigger: CCAAGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAAGTTTGATGAGCTGGATGCAGTGATGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAACGGTGGTTTGGTCTaGCTGGAGAGGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQNGGLV*LERLVV
Trigger: CACCACCAGCCTCTCCAGCAAGACCAAACCACCGTT...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRISADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTCAAGGAAATGCTACATaGTGGGACTGTAGCATGTAT +
Preference number: 5 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPQGNAT*WDCSMY
Trigger: ATACATGCTACAGTCCCACAATGTAGCATTTCCTTG...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS TCA 90 bp CTTCCTCAGGACAGCCTGAACTTCTGCAGACAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACACAGCTTTATAGCGTTCTCGCTCATC +
Preference number: 5 (lower is better)
Translates to: LPQDSLNFCRQLFVL*KLVLEHSFIAFSLI
Trigger: GATGAGCGAGAACGCTATAAAGCTGTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGAAGTTCAGGCTGTCCTGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 90 bp AGTAATAGCCCCCATACATACTGCCCAATCCACCAACGCCTCCCATaGCATACGGTTGTGAATATCCAAACAAGTTGTACCACTCACTGT +
Preference number: 5 (lower is better)
Translates to: SNSPHTYCPIHQRLP*HTVVNIQTSCTTHC
Trigger: ACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGCAGTATGTATGGGGGCTATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTCTTATGGTGGTATCTaGATAGGGCAGGTCGCTTGG +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTSYGGI*IGQVAW
Trigger: CCAAGCGACCTGCCCTATCAAGATACCACCATAAGA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGTTCTTCTGTGTCACTaGAGTAGAAGTCTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALVLLCH*SRSLGR
Trigger: TCGGCCCAGACTTCTACTCAAGTGACACAGAAGAAC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAAAGCGCCTTACTGGTTaGAGATCTGGCGCTATAGCT +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALKRLTG*RSGAIA
Trigger: AGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAAGCGCCTTACTGGTTaGAGATCTGGCGCTATAGCT +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEKRLTG*RSGAIA
Trigger: AGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGAATATCCAAACAAGTaGTACCACTCACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIEYPNK*YHSLSL
Trigger: CAAGGACAGTGAGTGGTACAACTTGTTTGGATATTC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTTTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGAC +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIFWLSR*GLLIKD
Trigger: GTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAA...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 90 bp AGCAATACTGCCCAATCCACCAACGCCTCCCATGCCATACGGTTGTaGATATCCAAACAAGTTGTACCACTCACTGTCCTTGTGAATGTA +
Preference number: 5 (lower is better)
Translates to: SNTAQSTNASHAIRL*ISKQVVPLTVLVNV
Trigger: TACATTCACAAGGACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGCAGTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413223.3
ENST00000436532.7
ENST00000611064.4
ENST00000612528.1
CDS GCA 90 bp TTAGGCAAACCAAAGCAATACTGCCCAATCCACCAACGCCTCCCATaGCATACGGTTGTGAATATCCAAACAAGTTGTACCACTCACTGT +
Preference number: 5 (lower is better)
Translates to: LGKPKQYCPIHQRLP*HTVVNIQTSCTTHC
Trigger: ACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGCAGTATTGCTTTGGTTTGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413223.3
ENST00000436532.7
ENST00000611064.4
ENST00000612528.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGAATCACAGGGTATTTaGCCACATAGTCGGGCATCA +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTESQGI*PHSRAS
Trigger: TGATGCCCGACTATGTGGCAAAATACCCTGTGATTC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CATAAGGGGCCTCATGTTTCCCTAGGTGTTACCCCTTCAGACACAGCACAGCCTACTCTTCATGGATTCTaGAAATTCTCTCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: HKGPHVSLGVTPSDTAQPTLHGF*KFSHVP
Trigger: AGGAACATGAGAGAATTTCAAGAATCCATGAAGAGT...AGGCTGTGCTGTGTCTGAAGGGGTAACACCTAGGGAAACATGAGGCCCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTACAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLAYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCAAAGGCACCAGACACTaGGGCTTTTGGTTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTKGTRH*GFWLSR
Trigger: CCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGAAAGGCACCAGACACTaGGGCTTTTGGTTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEKGTRH*GFWLSR
Trigger: CCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCACAAGGAAATGCTACATaGTGGGACTGTAGCATGTAT +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLAQGNAT*WDCSMY
Trigger: ATACATGCTACAGTCCCACAATGTAGCATTTCCTTG...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS TCA 90 bp ATACATACTGCCCAATCCACCAACGCCTCCCATGCCATACGGTTGTaGATATCCAAACAAGTTGTACCACTCACTGTCCTTGTGAATGTA +
Preference number: 5 (lower is better)
Translates to: IHTAQSTNASHAIRL*ISKQVVPLTVLVNV
Trigger: TACATTCACAAGGACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGCAGTATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAATCTTATGGTGGTATCTaGATAGGGCAGGTCGCTTGG +
Preference number: 5 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQSYGGI*IGQVAW
Trigger: CCAAGCGACCTGCCCTATCAAGATACCACCATAAGA...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGTTCTTCTGTGTCACTaGAGTAGAAGTCTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWVLLCH*SRSLGR
Trigger: TCGGCCCAGACTTCTACTCAAGTGACACAGAAGAAC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGGATCTTTGCAGGAGTaGAGGGGCGAACGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKGSLQE*RGERWF
Trigger: AAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTSADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTESADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTACTCTTCATGGATTCTaGAAATTCTCTCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRITLHGF*KFSHVP
Trigger: AGGAACATGAGAGAATTTCAAGAATCCATGAAGAGT...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp CGCACGCCTGTAATCCCAGCTACTGGGGAGGCTAATTGCTTGAACAGGAGAATTGCGTTAAGAATAACCTaGTACATCCCAATTCATTAC +
Preference number: 5 (lower is better)
Translates to: RTPVIPATGEANCLNRRIALRIT*YIPIHY
Trigger: GTAATGAATTGGGATGTACAAGGTTATTCTTAACGC...AATTCTCCTGTTCAAGCAATTAGCCTCCCCAGTAGCTGGGATTACAGGCGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000611064.4
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTCTGAGGTCAGGAGCTaGAGACCAACCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLSEVRS*RPTWPT
Trigger: TGTTGGCCAGGTTGGTCTCAAGCTCCTGACCTCAGA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATCTGAGGTCAGGAGCTaGAGACCAACCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKSEVRS*RPTWPT
Trigger: TGTTGGCCAGGTTGGTCTCAAGCTCCTGACCTCAGA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS GCA 90 bp AGCACTAATGAGATAAACTATCATGGTGACAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTCTACCCGGCAGAACACTGCATTCAC +
Preference number: 5 (lower is better)
Translates to: STNEINYHGDKQEDH*SYLSSFYPAEHCIH
Trigger: GTGAATGCAGTGTTCTGCCGGGTAGAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGATAGTTTATCTCATTAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 90 bp ATCTCCTGTTGTTCCATATATTCTCTATGTCTCCGAGCTGCCTCATaGCTCCATAACTTTAGGCAAACCAAAGCAATACTGCCCAATCCA +
Preference number: 5 (lower is better)
Translates to: ISCCSIYSLCLRAAS*LHNFRQTKAILPNP
Trigger: TGGATTGGGCAGTATTGCTTTGGTTTGCCTAAAGTTATGGAGGCATGAGGCAGCTCGGAGACATAGAGAATATATGGAACAACAGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413223.3
ENST00000436532.7
ENST00000611064.4
ENST00000612528.1
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGTTCTTCTGTGTCACTaGAGTAGAAGTCTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACVLLCH*SRSLGR
Trigger: TCGGCCCAGACTTCTACTCAAGTGACACAGAAGAAC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGAATATCCAAACAAGTaGTACCACTCACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALEYPNK*YHSLSL
Trigger: CAAGGACAGTGAGTGGTACAACTTGTTTGGATATTC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGAATATCCAAACAAGTaGTACCACTCACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEEYPNK*YHSLSL
Trigger: CAAGGACAGTGAGTGGTACAACTTGTTTGGATATTC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAACTCTTCATGGATTCTaGAAATTCTCTCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLATLHGF*KFSHVP
Trigger: AGGAACATGAGAGAATTTCAAGAATCCATGAAGAGT...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCAGCGTTAAGAATAACCTaGTACATCCCAATTCATTAC +
Preference number: 5 (lower is better)
Translates to: TNWKLIWEALASLPQRLAALRIT*YIPIHY
Trigger: GTAATGAATTGGGATGTACAAGGTTATTCTTAACGC...TGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGAATTGATGGTCCACTaGCCCATCACACTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLELMVH*PITLPG
Trigger: TCCTGGCAGTGTGATGGGCAAGTGGACCATCAATTC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGAGAGATTAAGCAATTaGCCCAAGATCAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALERLSN*PKIRMS
Trigger: AGACATCCTGATCTTGGGCAAATTGCTTAATCTCTC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGAGAGATTAAGCAATTaGCCCAAGATCAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEERLSN*PKIRMS
Trigger: AGACATCCTGATCTTGGGCAAATTGCTTAATCTCTC...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTATTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALLSRLG*LIKDLF
Trigger: GAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAA...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCTTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGAC +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTFWLSR*GLLIKD
Trigger: GTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAA...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGTTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGAC +
Preference number: 5 (lower is better)
Translates to: WLNQLEADLGSACFSTTEFWLSR*GLLIKD
Trigger: GTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAA...CTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATCTGAGGTCAGGAGCTaGAGACCAACCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPSEVRS*RPTWPT
Trigger: TGTTGGCCAGGTTGGTCTCAAGCTCCTGACCTCAGA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS GCA 90 bp GTAGCAGAGGCCACCTCGGTTGGTATCATTCACATAGACTATGGCTaGGGCCATATACAAAATAAACAAGGCAACGTTAATTCCAAATTC +
Preference number: 5 (lower is better)
Translates to: VAEATSVGIIHIDYG*GHIQNKQGNVNSKF
Trigger: GAATTTGGAATTAACGTTGCCTTGTTTATTTTGTATATGGCCGCAGCCATAGTCTATGTGAATGATACCAACCGAGGTGGCCTCTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGTTCTTCTGTGTCACTaGAGTAGAAGTCTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLVLLCH*SRSLGR
Trigger: TCGGCCCAGACTTCTACTCAAGTGACACAGAAGAAC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGAAGCGCCTTACTGGTTaGAGATCTGGCGCTATAGCT +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLKRLTG*RSGAIA
Trigger: AGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAAAGCGCCTTACTGGTTaGAGATCTGGCGCTATAGCT +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKKRLTG*RSGAIA
Trigger: AGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTT...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGAATCACAGGGTATTTaGCCACATAGTCGGGCATCA +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACESQGI*PHSRAS
Trigger: TGATGCCCGACTATGTGGCAAAATACCCTGTGATTC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACSADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAACTCTTCATGGATTCTaGAAATTCTCTCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALTLHGF*KFSHVP
Trigger: AGGAACATGAGAGAATTTCAAGAATCCATGAAGAGT...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACTCTTCATGGATTCTaGAAATTCTCTCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTTLHGF*KFSHVP
Trigger: AGGAACATGAGAGAATTTCAAGAATCCATGAAGAGT...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCACAGAGGCTAGCATTAGCGTTAAGAATAACCTaGTACATCCCAATTCATTAC +
Preference number: 5 (lower is better)
Translates to: NWKLIWEALASLPQRLALALRIT*YIPIHY
Trigger: GTAATGAATTGGGATGTACAAGGTTATTCTTAACGC...TAATGCTAGCCTCTGTGGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp GCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTCTCTACCGCGTTAAGAATAACCTaGTACATCCCAATTCATTAC +
Preference number: 5 (lower is better)
Translates to: AYWLNQLEADLGSACFSTALRIT*YIPIHY
Trigger: GTAATGAATTGGGATGTACAAGGTTATTCTTAACGC...GGTAGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGCAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACAATTGGAAGCTGATTaGGGAAGCGCTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKQLEAD*GSACFS
Trigger: AGAGAAGCAAGCGCTTCCCAAATCAGCTTCCAATTG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGAAAGTAGCACCAGAATaGATGGTCCACTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLKVAPE*MVHLPI
Trigger: GATGGGCAAGTGGACCATCAATTCTGGTGCTACTTT...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAAGGGAGTTTCCAAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAGGATGTCTGAAAATGTaGATCTGGGATTCAAACACC +
Preference number: 5 (lower is better)
Translates to: KGSFQGNATLWDCSMYVQGCLKM*IWDSNT
Trigger: GGTGTTTGAATCCCAGATCAACATTTTCAGACATCC...TTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTTGGAAACTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGAATCACAGGGTATTTaGCCACATAGTCGGGCATCA +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPESQGI*PHSRAS
Trigger: TGATGCCCGACTATGTGGCAAAATACCCTGTGATTC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKSADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGTCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLSADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTACTGGTTAAACCAATaGGAAGCTGATTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACYWLNQ*EADLGS
Trigger: GCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325631.10
ENST00000436532.7
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAAAAGTAGCACCAGAATaGATGGTCCACTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPKVAPE*MVHLPI
Trigger: GATGGGCAAGTGGACCATCAATTCTGGTGCTACTTT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGGATGTCTGAAAATGTaGATCTGGGATTCAAACACC +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACGCLKM*IWDSNT
Trigger: GGTGTTTGAATCCCAGATCAACATTTTCAGACATCC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCGAGAGATTAAGCAATTaGCCCAAGATCAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACERLSN*PKIRMS
Trigger: AGACATCCTGATCTTGGGCAAATTGCTTAATCTCTC...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp TTTAATGTTGCATACTGGTTAAACCAATTGGAAGCTGATTTGGGAAGCGCTTGCTTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: FNVAYWLNQLEADLGSACLSRLG*LIKDLF
Trigger: GAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAA...GCAAGCGCTTCCCAAATCAGCTTCCAATTGGTTTAACCAGTATGCAACATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAAAAGGCACCAGACACTaGGGCTTTTGGTTAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPKGTRH*GFWLSR
Trigger: CCTACTTAACCAAAAGCCCAAGTGTCTGGTGCCTTT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp ACAGAGAGATTAAGCAATTTGCCCAAGATCAGGATGTCTGAAAATGTTGATCTGGAATATCCAAACAAGTaGTACCACTCACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TERLSNLPKIRMSENVDLEYPNK*YHSLSL
Trigger: CAAGGACAGTGAGTGGTACAACTTGTTTGGATATTC...CAGATCAACATTTTCAGACATCCTGATCTTGGGCAAATTGCTTAATCTCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATCTGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPSADSS*YSENWS
Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAAAAGCAATACCATTCATACAATTCAATGTGTCCAGGGCAGGCTGGACTATGGGCGTTAAGAATAACCTaGTACATCCCAATTCATTAC +
Preference number: 5 (lower is better)
Translates to: KKQYHSYNSMCPGQAGLWALRIT*YIPIHY
Trigger: GTAATGAATTGGGATGTACAAGGTTATTCTTAACGC...CCATAGTCCAGCCTGCCCTGGACACATTGAATTGTATGAATGGTATTGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAATTTTGGTTAAGTAGGTaGGGCTTGCTCATTAAGGAC +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKFWLSR*GLLIKD
Trigger: GTCCTTAATGAGCAAGCCCAACCTACTTAACCAAAA...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAACAAGGAAATGCTACATaGTGGGACTGTAGCATGTAT +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKQGNAT*WDCSMY
Trigger: ATACATGCTACAGTCCCACAATGTAGCATTTCCTTG...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGAATATCCAAACAAGTaGTACCACTCACTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPEYPNK*YHSLSL
Trigger: CAAGGACAGTGAGTGGTACAACTTGTTTGGATATTC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAGGATGTCTGAAAATGTaGATCTGGGATTCAAACACC +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPGCLKM*IWDSNT
Trigger: GGTGTTTGAATCCCAGATCAACATTTTCAGACATCC...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCATTAAGTAGGTTGGGCTaGCTCATTAAGGACCTTTTC +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPLSRLG*LIKDLF
Trigger: GAAAAGGTCCTTAATGAGCAAGCCCAACCTACTTAA...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS-3UTR CAA 90 bp AAGGAAATGCTACATTGTGGGACTGTAGCATGTATGTCCAAAGGGAATAGAAAAGCGTTAAGAATAACCTaGTACATCCCAATTCATTAC +
Preference number: 5 (lower is better)
Translates to: KEMLHCGTVACMSKGNRKALRIT*YIPIHY
Trigger: GTAATGAATTGGGATGTACAAGGTTATTCTTAACGC...TTTTCTATTCCCTTTGGACATACATGCTACAGTCCCACAATGTAGCATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
CDS-3UTR CAA 90 bp AGTAACTCCTTTAATCCTAACAACTCTATGAGGAAGGAACTATTATTAGCCCCAACTCTTCATGGATTCTaGAAATTCTCTCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: SNSFNPNNSMRKELLLAPTLHGF*KFSHVP
Trigger: AGGAACATGAGAGAATTTCAAGAATCCATGAAGAGT...TGGGGCTAATAATAGTTCCTTCCTCATAGAGTTGTTAGGATTAAAGGAGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 72 bp AGCCGCCAGGAAGAGCGCGCACGCTGCCCAGGACTCTaGAACCGGTATCGGGCTCCCGGGGTGGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: SRQEERARCPGL*NRYRAPGVGAG
Trigger: CCCCGCCCCCACCCCGGGAGCCCGATACCGGTTTCAGAGTCCTGGGCAGCGTGCGCGCTCTTCCTGGCGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647531.1
CDS CAA 90 bp GTCTCCCCCGCGCCAGCCTCTGGGCGCCCGGTCCCACAAATCTCATaGTGTCCTCGGTTCTGCCCGCGCCGGCTAGGCGTTCGTCTTCGC +
Preference number: 6 (lower is better)
Translates to: VSPAPASGRPVPQIS*CPRFCPRRLGVRLR
Trigger: GCGAAGACGAACGCCTAGCCGGCGCGGGCAGAACCGAGGACACAATGAGATTTGTGGGACCGGGCGCCCAGAGGCTGGCGCGGGGGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS CAA 72 bp GCGCCAGCCTCTGGGCGCCCGGTCCCACAAATCTCATaGTGTCCTCGGTTCTGCCCGCGCCGGCTAGGCGTT +
Preference number: 6 (lower is better)
Translates to: APASGRPVPQIS*CPRFCPRRLGV
Trigger: AACGCCTAGCCGGCGCGGGCAGAACCGAGGACACAATGAGATTTGTGGGACCGGGCGCCCAGAGGCTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS GCA 72 bp CGCCCGGTCCCACAAATCTCATTGTGTCCTCGGTTCTaGCCGCGCCGGCTAGGCGTTCGTCTTCGCGTTTCT +
Preference number: 6 (lower is better)
Translates to: RPVPQISLCPRF*PRRLGVRLRVS
Trigger: AGAAACGCGAAGACGAACGCCTAGCCGGCGCGGGCAGAACCGAGGACACAATGAGATTTGTGGGACCGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS CCA 72 bp CTGCCCGCGCCGGCTAGGCGTTCGTCTTCGCGTTTCTaGCTGAAACCCACTGTCTTTGGAGATTCCGACCCA +
Preference number: 6 (lower is better)
Translates to: LPAPARRSSSRF*LKPTVFGDSDP
Trigger: TGGGTCGGAATCTCCAAAGACAGTGGGTTTCAGCCAGAAACGCGAAGACGAACGCCTAGCCGGCGCGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS TCA 72 bp CCGCGCCGGCTAGGCGTTCGTCTTCGCGTTTCTGGCTaGAACCCACTGTCTTTGGAGATTCCGACCCAACGA +
Preference number: 6 (lower is better)
Translates to: PRRLGVRLRVSG*NPLSLEIPTQR
Trigger: TCGTTGGGTCGGAATCTCCAAAGACAGTGGGTTTCAGCCAGAAACGCGAAGACGAACGCCTAGCCGGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS GCA 72 bp GCTGGACCCAAGAAACGGGTAGATTTCGGATACTTCTaGGCTTCCGAGGGGTCGGGAAAGGCTCTGCGGTTC +
Preference number: 6 (lower is better)
Translates to: AGPKKRVDFGYF*ASEGSGKALRF
Trigger: GAACCGCAGAGCCTTTCCCGACCCCTCGGAAGCGCAGAAGTATCCGAAATCTACCCGTTTCTTGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS TCA 72 bp TTCCTTCTGACCCTCCGTAGGGATCTTTGCAGGAGTTaGGGGGCGAACGGTGGTTTGGTCTTGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FLLTLRRDLCRS*GANGGLVLLER
Trigger: CCTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCCCTACGGAGGGTCAGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CAA 72 bp GGGTTCTTATGGTGGTATCTTGATAGGGCAGGTCGCTaGGGACCTCATCGTAGCGCCTGTCCCGATTCCTGG +
Preference number: 6 (lower is better)
Translates to: GFLWWYLDRAGR*GPHRSACPDSW
Trigger: CCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATCAAGATACCACCATAAGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 72 bp TGCGTCAGCCTCTTTCCGGGAACTAAAGGTTCCTTCTaGCCCTCCGTAGGGATCTTTGCAGGAGTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: CVSLFPGTKGSF*PSVGIFAGVEG
Trigger: CCCCTCAACTCCTGCAAAGATCCCTACGGAGGGTCAGAAGGAACCTTTAGTTCCCGGAAAGAGGCTGACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CCA 72 bp GGTTCTTATGGTGGTATCTTGATAGGGCAGGTCGCTTaGGACCTCATCGTAGCGCCTGTCCCGATTCCTGGA +
Preference number: 6 (lower is better)
Translates to: GSYGGILIGQVA*DLIVAPVPIPG
Trigger: TCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATCAAGATACCACCATAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 72 bp CTGGTGGTGAACACTCCACTCCATCGGAGATGTACCTaGTATCAGACACCGGCTTATCCCATTCGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: LVVNTPLHRRCT*YQTPAYPIRGP
Trigger: AGGACCCCGAATGGGATAAGCCGGTGTCTGATATCAGGTACATCTCCGATGGAGTGGAGTGTTCACCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 72 bp CGAACGGTGGTTTGGTCTTGCTGGAGAGGCTGGTGGTaGACACTCCACTCCATCGGAGATGTACCTGATATC +
Preference number: 6 (lower is better)
Translates to: RTVVWSCWRGWW*TLHSIGDVPDI
Trigger: GATATCAGGTACATCTCCGATGGAGTGGAGTGTTCACCACCAGCCTCTCCAGCAAGACCAAACCACCGTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CCA 72 bp TTCGTCTTCGCGTTTCTGGCTGAAACCCACTGTCTTTaGAGATTCCGACCCAACGAGGCCGAAACTAAGCCG +
Preference number: 6 (lower is better)
Translates to: FVFAFLAETHCL*RFRPNEAETKP
Trigger: CGGCTTAGTTTCGGCCTCGTTGGGTCGGAATCTCCAAAGACAGTGGGTTTCAGCCAGAAACGCGAAGACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS CAA 72 bp CGTAGCGCCTGTCCCGATTCCTGGATCTTCCATCATTaGACATTTGTGATTTTCACACCTGCGCAGCCGCCA +
Preference number: 6 (lower is better)
Translates to: RSACPDSWIFHH*TFVIFTPAQPP
Trigger: TGGCGGCTGCGCAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000614617.4
ENST00000622835.4
CDS GCA 72 bp AAGCAGCTCCACCACACCCAGTATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGAGTATCTCAGGTTATA +
Preference number: 6 (lower is better)
Translates to: KQLHHTQYSQQA*PRLHVGVSQVI
Trigger: TATAACCTGAGATACTCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATACTGGGTGTGGTGGAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 72 bp TCGGCTTTCCGAATGATGTGGCAATCTGCTCATCACTaGATCCAGCTCATCAAACTTCCTCAGGACAGCCTG +
Preference number: 6 (lower is better)
Translates to: SAFRMMWQSAHH*IQLIKLPQDSL
Trigger: CAGGCTGTCCTGAGGAAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTGCCACATCATTCGGAAAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CAA 72 bp CGTAGCGCCTGTCCCGATTCCTGGATCTTCCATCATTaGACATTTGTGATTTTCACACCTGCGTCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: RSACPDSWIFHH*TFVIFTPASAE
Trigger: CTCTGCGGACGCAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515844.1
ENST00000611349.1
CDS TCA 72 bp AGTTGTACCACTCACTGTCCTTGTGAATGTAAGCTGTaGCACAAGCAAAGACACCGGCCCCCAAAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: SCTTHCPCECKL*HKQRHRPPKAA
Trigger: AGCTGCTTTTGGGGGCCGGTGTCTTTGCTTGTGTCACAGCTTACATTCACAAGGACAGTGAGTGGTACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 72 bp GCCCAATCCACCAACGCCTCCCATGCCATACGGTTGTaGATATCCAAACAAGTTGTACCACTCACTGTCCTT +
Preference number: 6 (lower is better)
Translates to: AQSTNASHAIRL*ISKQVVPLTVL
Trigger: AAGGACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 72 bp CCCCATACATACTGCCCAATCCACCAACGCCTCCCATaGCATACGGTTGTGAATATCCAAACAAGTTGTACC +
Preference number: 6 (lower is better)
Translates to: PHTYCPIHQRLP*HTVVNIQTSCT
Trigger: GGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGCAGTATGTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CAA 72 bp TTCTTCCAGGAGTCAGGGACAAAGCGCCTTACTGGTTaGAGATCTGGCGCTATAGCTGGTTCTTCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: FFQESGTKRLTG*RSGAIAGSSVS
Trigger: TGACACAGAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTCCCTGACTCCTGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 72 bp CCAAAGCAATACTGCCCAATCCACCAACGCCTCCCATaGCATACGGTTGTGAATATCCAAACAAGTTGTACC +
Preference number: 6 (lower is better)
Translates to: PKQYCPIHQRLP*HTVVNIQTSCT
Trigger: GGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGAGGCGTTGGTGGATTGGGCAGTATTGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413223.3
ENST00000436532.7
ENST00000611064.4
ENST00000612528.1
CDS CCA 72 bp AAAGTTCTTCCAGGAGTCAGGGACAAAGCGCCTTACTaGTTTGAGATCTGGCGCTATAGCTGGTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: KVLPGVRDKAPY*FEIWRYSWFFC
Trigger: ACAGAAGAACCAGCTATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTCCCTGACTCCTGGAAGAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000515844.1
ENST00000611064.4
ENST00000611349.1
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS TCA 72 bp GACAGCCTGAACTTCTGCAGACAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACACAGCTTTATAGCGTTC +
Preference number: 6 (lower is better)
Translates to: DSLNFCRQLFVL*KLVLEHSFIAF
Trigger: GAACGCTATAAAGCTGTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGAAGTTCAGGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000325631.10
ENST00000413223.3
ENST00000436532.7
ENST00000454295.6
ENST00000512803.5
ENST00000611064.4
ENST00000612528.1
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 72 bp GAGATAAACTATCATGGTGACAAACAGGAAGATCATTaGAGCTATCTGTCCTCCTTCTACCCGGCAGAACAC +
Preference number: 6 (lower is better)
Translates to: EINYHGDKQEDH*SYLSSFYPAEH
Trigger: GTGTTCTGCCGGGTAGAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGATAGTTTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS CAA 72 bp CGTAGCGCCTGTCCCGATTCCTGGATCTTCCATCATTaGACATTTGTGATTTTCACACCTGGCTTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: RSACPDSWIFHH*TFVIFTPGLKV
Trigger: AACTTTTAAGCCAGGTGTGAAAATCACAAATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512803.5
ENST00000622563.4
CDS GCA 72 bp TGTTCCATATATTCTCTATGTCTCCGAGCTGCCTCATaGCTCCATAACTTTAGGCAAACCAAAGCACTAATG +
Preference number: 6 (lower is better)
Translates to: CSIYSLCLRAAS*LHNFRQTKALM
Trigger: CATTAGTGCTTTGGTTTGCCTAAAGTTATGGAGGCATGAGGCAGCTCGGAGACATAGAGAATATATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325631.10
ENST00000454295.6
ENST00000512803.5
ENST00000614617.4
ENST00000622563.4
ENST00000622835.4
ENST00000645446.1
ENST00000647531.1
CDS GCA 72 bp TGTTCCATATATTCTCTATGTCTCCGAGCTGCCTCATaGCTCCATAACTTTAGGCAAACCAAAGCAATACTG +
Preference number: 6 (lower is better)
Translates to: CSIYSLCLRAAS*LHNFRQTKAIL
Trigger: CAGTATTGCTTTGGTTTGCCTAAAGTTATGGAGGCATGAGGCAGCTCGGAGACATAGAGAATATATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413223.3
ENST00000436532.7
ENST00000611064.4
ENST00000612528.1