RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000007047

Ensembl transcript IDs: ENST00000262891.9, ENST00000300843.8, ENST00000587566.5, ENST00000588621.5, ENST00000590909.1, ENST00000592207.5, ENST00000592762.5, ENST00000620044.4, ENST00000622871.1

Found 740 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGA +
Preference number: 1 (lower is better)
Translates to: LGPWWLRARGRWRCG*RGCGRPGRCPPHGG
Trigger: TCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CCA 90 bp CAGGGCGGTGCCCGCCACACGGCGGAAGAGAACTCCCCGCAAGCCTaGCCGGGGCAGCTGGCAGACCTCCACTTCGAAGTGGGACAGGGG +
Preference number: 1 (lower is better)
Translates to: QGGARHTAEENSPQA*PGQLADLHFEVGQG
Trigger: CCCCTGTCCCACTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTTCTCTTCCGCCGTGTGGCGGGCACCGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CCA 90 bp GCCCTTTGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCCCTGGGG +
Preference number: 1 (lower is better)
Translates to: ALCCGWCLCWNLFRW*CRWAPAPVPGPALG
Trigger: CCCCAGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 90 bp GCTGCCCTTTGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: AALCCGWCLCWNLFR*WCRWAPAPVPGPAL
Trigger: CAGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR GCA 90 bp AGGTGGAAGAGGAACTCCGCTGCCCTTTGCTGTGGCTGGTGCCTTTaGTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCC +
Preference number: 1 (lower is better)
Translates to: RWKRNSAALCCGWCL*WNLFRWWCRWAPAP
Trigger: GGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 90 bp TGGAAGAGGAACTCCGCTGCCCTTTGCTGTGGCTGGTGCCTTTGCTaGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTG +
Preference number: 1 (lower is better)
Translates to: WKRNSAALCCGWCLC*NLFRWWCRWAPAPV
Trigger: CACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR GCA 90 bp GGTGGTAGGTGGAAGAGGAACTCCGCTGCCCTTTGCTGTGGCTGGTaGCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCC +
Preference number: 1 (lower is better)
Translates to: GGRWKRNSAALCCGW*LCWNLFRWWCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCACCTACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 90 bp GGGATGGGCCACAGAAATCGCTATGCCTGCGCTGGCGGTGGTAGGTaGAAGAGGAACTCCGCTGCCCTTTGCTGTGGCTGGTGCCTTTGC +
Preference number: 1 (lower is better)
Translates to: GMGHRNRYACAGGGR*KRNSAALCCGWCLC
Trigger: GCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTGGCCCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR GCA 90 bp GCCTGCGCTGGCGGTGGTAGGTGGAAGAGGAACTCCGCTGCCCTTTaGTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTGGTGT +
Preference number: 1 (lower is better)
Translates to: ACAGGGRWKRNSAAL*CGWCLCWNLFRWWC
Trigger: ACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCACCTACCACCGCCAGCGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR GCA 90 bp CCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTaGCCTTGGAAGAAAGCCCAGGCCCCTGTCCATAACCTTCAAGGC +
Preference number: 1 (lower is better)
Translates to: PPISTLPTTLPWLPQ*PWKKAQAPVHNLQG
Trigger: GCCTTGAAGGTTATGGACAGGGGCCTGGGCTTTCTTCCAAGGGCACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR TCA 90 bp CATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTaGGGACACATCTGCCTCCTCCATTGGACTGTGAGCTCTATGAGG +
Preference number: 1 (lower is better)
Translates to: HHLWTPLYQPCPVAA*GHICLLHWTVSSMR
Trigger: CCTCATAGAGCTCACAGTCCAATGGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR TCA 90 bp CACACCCAGAGGCTACATAGACCACACACGCCAGTGGGGACCTTCTaGGCCAGCCAAAGCCACAGTCCAGACACCTGTTACCAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: HTQRLHRPHTPVGTF*ASQSHSPDTCYQVL
Trigger: CAGGACCTGGTAACAGGTGTCTGGACTGTGGCTTTGGCTGGCTCAGAAGGTCCCCACTGGCGTGTGTGGTCTATGTAGCCTCTGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR GCA 90 bp CTGTTGGGAGGAATGGAAGATTTCCTCAGTTTCCCTCCCTGCCCCTaGCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGA +
Preference number: 1 (lower is better)
Translates to: LLGGMEDFLSFPPCP*PVPKVSSGALLVGR
Trigger: TCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCAGGGGCAGGGAGGGAAACTGAGGAAATCTTCCATTCCTCCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: VTAAAPQETFAEGRV*GIYKDLYKVPRASL
Trigger: CAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR GCA 90 bp CCAGGTCCTGCCCACTTTGCCTCACAGGACTCTCTTAAATCTATCTaGGCTCTCCCCATCTGTCCAGCCCCGACCTCTTTCCTGATCTTC +
Preference number: 1 (lower is better)
Translates to: PGPAHFASQDSLKSI*ALPICPAPTSFLIF
Trigger: GAAGATCAGGAAAGAGGTCGGGGCTGGACAGATGGGGAGAGCGCAGATAGATTTAAGAGAGTCCTGTGAGGCAAAGTGGGCAGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 90 bp ATGACCCCACCCTGCCCACTTTCTCTTCTGGGCTCCCCAAGACAATaGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACA +
Preference number: 1 (lower is better)
Translates to: MTPPCPLSLLGSPRQ*FVRCLCQNPCLPQT
Trigger: TGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGCCCAGAAGAGAAAGTGGGCAGGGTGGGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 90 bp ACATGGCCCATTTGGGCCAATGAGAGTCTGCCCTGGGACTTTTGCTaGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: TWPIWANESLPWDFC*ETDNEGLSAAESWR
Trigger: CCTCCAGCTTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 90 bp CTCAATTCTCTTGGTGTCCCCGAAGTCCTCCTCGGGCTCTGTGTATaGCTTCAACTCCTCACCCTCATAGCCGATGTTGATCCATTTGTC +
Preference number: 1 (lower is better)
Translates to: LNSLGVPEVLLGLCV*LQLLTLIADVDPFV
Trigger: GACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAGGAGGACTTCGGGGACACCAAGAGAATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 90 bp TCTAGAGTCACAGTGATTGGTTTAGAGAAAATCACATGGCCCATTTaGGCCAATGAGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGAC +
Preference number: 1 (lower is better)
Translates to: SRVTVIGLEKITWPI*ANESLPWDFCWETD
Trigger: GTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGCCATGTGATTTTCTCTAAACCAATCACTGTGACTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR TCA 90 bp GTCTTTCTGCTGCAGAAAGCTGGAGGGATAGAAACTTCTAACTGCTaGAGTCATCTGTGCCACCAGGAAAGGAGCCCTTACTTGATAAAA +
Preference number: 1 (lower is better)
Translates to: VFLLQKAGGIETSNC*SHLCHQERSPYLIK
Trigger: TTTTATCAAGTAAGGGCTCCTTTCCTGGTGGCACAGATGACTTCAGCAGTTAGAAGTTTCTATCCCTCCAGCTTTCTGCAGCAGAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: MRVTRVRKARAVPATRRKAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGT +
Preference number: 2 (lower is better)
Translates to: MRVTRVRKARAVPATRRKRALGP*WLRARG
Trigger: ACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCT...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCAGCGGGCGGCTGCTGTaGCCTGGCGCAGAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGSGRLL*PGAELP
Trigger: TGGCAGCTCTGCGCCAGGCCACAGCAGCCGCCCGCT...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CAA 90 bp AAGAGTAAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCC +
Preference number: 2 (lower is better)
Translates to: KSKGPGTVVAQSSRS*EMRVTRVRKARAVP
Trigger: GGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTTACTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CAA 90 bp CGCTGCCCTTTGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: RCPLLWLVPLLELVP*VVSLGARTRARASP
Trigger: AGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATAGGAACGGCTGTGGCTaGCGGCAGCGGCAGCGGGCG +
Preference number: 2 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHRNGCG*RQRQRA
Trigger: CGCCCGCTGCCGCTGCCGCCAGCCACAGCCGTTCCT...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCACCTCCACTTCGAAGTaGGACAGGGGCTCGGGCCCG +
Preference number: 2 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLTSTSK*DRGSGP
Trigger: CGGGCCCGAGCCCCTGTCCCACTTCGAAGTGGAGGT...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CAA 90 bp AGGAACTCCGCTGCCCTTTGCTGTGGCTGGTGCCTTTGCTGGAACTaGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RNSAALCCGWCLCWN*FRWWCRWAPAPVPG
Trigger: CCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR GCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTGGAAGGCCAGGGCGGTaGCCGCCACACGGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: PDIGTGASGMRPSSILPSGRPGR*PPHGGR
Trigger: TCTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCC...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR GCA 90 bp TCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCCTCCTTGTGGCTGGTGCCTTTaGTGGAACTTGTTCCGTTGG +
Preference number: 2 (lower is better)
Translates to: SHSPRCCSSPSGLAAAPPCGWCL*WNLFRW
Trigger: CCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACA...AGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGAGGAACGGCTGTGGCTaGCGGCAGCGGCAGCGGGCG +
Preference number: 2 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVRNGCG*RQRQRA
Trigger: CGCCCGCTGCCGCTGCCGCCAGCCACAGCCGTTCCT...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR-3UTR GCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTGGCCTGGCGCAGAGCTaGCATCAGGGCCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PDIGTGASGMRPSSILPSGLAQS*HQGLRR
Trigger: CCTCCTGAGGCCCTGATGGCAGCTCTGCGCCAGGCC...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR GCA 90 bp ACCTCAGGTCCCCCGATTCTCTCAGGTTCGTCTGCGACCCTTCGGGTCAGTTTGGGAAGGCCAGGGCGGTaGCCGCCACACGGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: TSGPPILSGSSATLRVSLGRPGR*PPHGGR
Trigger: TCTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCC...CAAACTGACCCGAAGGGTCGCAGACGAACCTGAGAGAATCGGGGGACCTGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR GCA 90 bp CGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCGGCCTGGCGCAGAGCTaGCATCAGGGCCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: RYRNWGLGDEAEFHPAFFGLAQS*HQGLRR
Trigger: CCTCCTGAGGCCCTGATGGCAGCTCTGCGCCAGGCC...GAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTCCTGGCCGGGGCAGCTaGCAGACCTCCACTTCGAAG +
Preference number: 2 (lower is better)
Translates to: PDIGTGASGMRPSSILPSPGRGS*QTSTSK
Trigger: CTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGG...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR TCA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCATCCTTCTTCTGTGCTaGGCGGCCCCAGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSILLLC*AAPENS
Trigger: GCTGTTCTCTGGGGCCGCTCAGCACAGAAGAAGGAT...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp TCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGGAGTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: SGISALLGLWALLTMGLEWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...CTCCAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR GCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCGCGGCTGCTGTGGCCTaGCGCAGAGCTGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: FRETEVMIKGESPPWPLPAAAVA*RRAAIR
Trigger: CCTGATGGCAGCTCTGCGCCAGGCCACAGCAGCCGC...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR TCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCCTGGGGCCTCGGGGATaGGGCCGAGTTCCATCCTGC +
Preference number: 2 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRLGPRG*GRVPSC
Trigger: GCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAG...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGCTCTCCCTGCCCCTaGCCAAGGCCTAATTTTGAG +
Preference number: 2 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWSSPCP*PRPNFE
Trigger: CTCAAAATTAGGCCTTGGGCAGGGGCAGGGAGAGCT...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR GCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACCCTGGCCGGGGCAGCTaGCAGACCTCCACTTCGAAG +
Preference number: 2 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHPGRGS*QTSTSK
Trigger: CTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGG...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR-3UTR CCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGCCCTGGGACCGTGGTaGCTCAGAGCTCGAGGTCGT +
Preference number: 2 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQALGPW*LRARGR
Trigger: ACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGC...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp TCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGGAGCTCGGGCTCTGTGTATaGCTTCAACTCCTCACCCTC +
Preference number: 2 (lower is better)
Translates to: SGISALLGLWALLTMGLELGLCV*LQLLTL
Trigger: GAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAG...CTCCAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR TCA 90 bp CCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCCCAGTGGGGACCTTCTaGGCCAGCCAAAGCCACAGT +
Preference number: 2 (lower is better)
Translates to: PFHPAHSTNPPISTLPTTPVGTF*ASQSHS
Trigger: ACTGTGGCTTTGGCTGGCTCAGAAGGTCCCCACTGG...GGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp CCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCCCATGGCTCCCCCAGTaGCCTTGGAAGAAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: PFHPAHSTNPPISTLPTTPWLPQ*PWKKAQ
Trigger: CTGGGCTTTCTTCCAAGGGCACTGGGGGAGCCATGG...GGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTAGCGGGCGGCTGCTGTaGCCTGGCGCAGAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFSGRLL*PGAELP
Trigger: TGGCAGCTCTGCGCCAGGCCACAGCAGCCGCCCGCT...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp CCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACACCTCCACTTCGAAGTaGGACAGGGGCTCGGGCCCG +
Preference number: 2 (lower is better)
Translates to: PKTMVCPVSVSESLSPTDTSTSK*DRGSGP
Trigger: CGGGCCCGAGCCCCTGTCCCACTTCGAAGTGGAGGT...GTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR CAA 90 bp CCCCACCCTGCCCACTTTCTCTTCTGGGCTCCCCAAGACAATGGTTaGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: PHPAHFLFWAPQDNG*SGVCVRIPVSHRQS
Trigger: GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGCCCAGAAGAGAAAGTGGGCAGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGGTGTTGGGGCTGTCTTaGTTACCACTGTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVVLGLS*LPLCPQ
Trigger: CTGGGGACACAGTGGTAATCAAGACAGCCCCAACAC...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTGGGGCGGTTTCCGTTTaGTCCCAAGGTAGATGGCAA +
Preference number: 2 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIGAVSV*SQGRWQ
Trigger: TTGCCATCTACCTTGGGATCAAACGGAAACCGCCCC...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR GCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCGCCCGATATAGGAACTaGGGCCTCGGGGATGAGGCC +
Preference number: 2 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSARYRN*GLGDEA
Trigger: GGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGGC...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp TGGGCCACAGAAATCGCTATGCCTGCGCTGGCGGTGGTAGGTGGAAGAGGAACTCCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 2 (lower is better)
Translates to: WATEIAMPALAVVGGRGTPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...AGTTCCTCTTCCACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACCCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 2 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR TCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGCTTAAAAACCGTAGGTaGCAGCGGCAGCTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVLKNRR*QRQLLK
Trigger: CTTGAGGAGCTGCCGCTGTCACCTACGGTTTTTAAG...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: FRETEVMIKGESPPWPLPQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR GCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAATCCTCAAGAGACCTTTaGAGAGGGGAGGGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQSSRDL*RGEGVG
Trigger: CCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGA...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR GCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCCCCTACCTACAACCTTaGCATGGCTCCCCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRPYLQP*HGSPSA
Trigger: GGCACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGG...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTCTCTCAGGTTCGTCTaGGACCCTTCGGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: VTAAAPQETFAEGRVWGISLRFV*DPSGQF
Trigger: AAACTGACCCGAAGGGTCGCAGACGAACCTGAGAGA...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp GGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCTGGAGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GTFAGKLTMRVFLLQKAGAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...TCCAGCTTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp CTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAATGCCTAACTAACTCCTACGCCCGATATAGGAACTaGGGCCTCGGGGATGAGGCC +
Preference number: 2 (lower is better)
Translates to: LPLLGFCPGQTQCLTNSYARYRN*GLGDEA
Trigger: GGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGGC...GTAGGAGTTAGTTAGGCATTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAGCGGCTGCTGTGGCCTaGCGCAGAGCTGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTAAAVA*RRAAIR
Trigger: CCTGATGGCAGCTCTGCGCCAGGCCACAGCAGCCGC...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTCAGCAGGAACGGCTGTaGCTGGCGGCAGCGGCAGCG +
Preference number: 2 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFQQERL*LAAAAA
Trigger: CGCTGCCGCTGCCGCCAGCCACAGCCGTTCCTGCTG...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR TCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCCTGGGGCCTCGGGGATaGGGCCGAGTTCCATCCTGC +
Preference number: 2 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLLGPRG*GRVPSC
Trigger: GCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAG...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAACGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQRWRCG*RGCGRP
Trigger: TGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACG...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR-3UTR GCA 90 bp CCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACGGCCGAGTTCCATCCTaGCTTCTTCCACGACCATCC +
Preference number: 2 (lower is better)
Translates to: PKTMVCPVSVSESLSPTDGRVPS*LLPRPS
Trigger: GGATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCC...GTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCCCAATGACCCCACCCTaGCCACTTTCTCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRPMTPP*PLSLLG
Trigger: GCCCAGAAGAGAAAGTGGGCAGGGTGGGGTCATTGG...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTAACTCCCCGCAAGCCTaGCCGGGGCAGCTGGCAGAC +
Preference number: 2 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFNSPQA*PGQLAD
Trigger: GTCTGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTT...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAAAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGT +
Preference number: 2 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQRALGP*WLRARG
Trigger: ACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCT...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR-3UTR CCA 90 bp GTGCAGGGGATGGGCCACAGAAATCGCTATGCCTGCGCTGGCGGTGGTAGGTGGAGTACAGCGTTTAGCTaGGTTCAGCACCAAAAATCT +
Preference number: 2 (lower is better)
Translates to: VQGMGHRNRYACAGGGRWSTAFS*VQHQKS
Trigger: AGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACT...CCACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTGGCCCATCCCCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR TCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCCTTAAAAACCGTAGGTaGCAGCGGCAGCTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: FRETEVMIKGESPPWPLPLKNRR*QRQLLK
Trigger: CTTGAGGAGCTGCCGCTGTCACCTACGGTTTTTAAG...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR GCA 90 bp CTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAATGCCTAACTAACTCCTACCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: LPLLGFCPGQTQCLTNSYQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...GTAGGAGTTAGTTAGGCATTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTGGAACCCCTACTAAGTaGAGCTCTGAGTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSGTPTK*SSESGH
Trigger: GTGGCCAGACTCAGAGCTGCACTTAGTAGGGGTTCC...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR TCA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTCTTAAAAACCGTAGGTaGCAGCGGCAGCTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSLKNRR*QRQLLK
Trigger: CTTGAGGAGCTGCCGCTGTCACCTACGGTTTTTAAG...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR GCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGAAAAACCACTGCCTaGATTCCCACGCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQGKTTA*IPTPLL
Trigger: AAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCC...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCACTATCCATGTCTAGCTaGCTCCTTCTCCTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPLSMSS*LLLLQE
Trigger: TTCCTGGAGGAGAAGGAGCCAGCTAGACATGGATAG...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGAGAAAGGAAAAACCACTaGCTGGATTCCCACGCCTCT +
Preference number: 2 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRERKNH*LDSHAS
Trigger: AGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTC...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTCTAATTTTGAGCTGTTaGGAGGAATGGAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: PDIGTGASGMRPSSILPSLILSC*EEWKIS
Trigger: GGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAG...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR CAA 90 bp AGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTaGCAGGTGAGGGCAGGGAAGGAAAATCCTAGGGTCAGCATTGGG +
Preference number: 2 (lower is better)
Translates to: RKNHCLDSHASSLTH*QVRAGKENPRVSIG
Trigger: CCCAATGCTGACCCTAGGATTTTCCTTCCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR TCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGAATTACCCAGTTCTCTaGAGATATACCACATACTCC +
Preference number: 2 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVNYPVL*RYTTYS
Trigger: GGAGTATGTGGTATATCTTCAGAGAACTGGGTAATT...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGGAAAGGAAAAACCACTaGCTGGATTCCCACGCCTCT +
Preference number: 2 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLERKNH*LDSHAS
Trigger: AGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTC...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR GCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCGGCCGAGTTCCATCCTaGCTTCTTCCACGACCATCC +
Preference number: 2 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLGRVPS*LLPRPS
Trigger: GGATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCC...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACACTAATTTTGAGCTGTTaGGAGGAATGGAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTLILSC*EEWKIS
Trigger: GGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAG...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTG +
Preference number: 2 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFAEGRV*GIYKDL
Trigger: CAAATCCTTGTAAATACCCCACACCCTCCCCTCTGC...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR TCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTGCCCATTTGGGCCAATaGGAGTCTGCCCTGGGACTT +
Preference number: 2 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSAHLGQ*ESALGL
Trigger: AAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGC...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCACCAAGCCTCTTCCCTaGAGTTCCCTGAACTTCCAT +
Preference number: 2 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLTKPLP*SSLNFH
Trigger: ATGGAAGTTCAGGGAACTTCAGGGAAGAGGCTTGGT...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTG +
Preference number: 2 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFAEGRV*GIYKDL
Trigger: CAAATCCTTGTAAATACCCCACACCCTCCCCTCTGC...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CCA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTTACTGGAGTAAGAAGTaGCTTAGAGTCCAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTYWSKK*LRVQCN
Trigger: GTTACACTGGACTCTAAGCCACTTCTTACTCCAGTA...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCCCCTGGGACTTTTGCTaGGAAACTGACAATGAGGGT +
Preference number: 2 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLPWDFC*ETDNEG
Trigger: ACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGG...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR TCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTCAGCATTTCTCTTGCTaGTTCTCCATCCATGCCCAA +
Preference number: 2 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSQHFSC*FSIHAQ
Trigger: TTGGGCATGGATGGAGAATCAGCAAGAGAAATGCTG...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR TCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR TCA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CCA 72 bp CGCACCCCCGTGCAGGCAGGCCAGCAGGAACGGCTGTaGCTGGCGGCAGCGGCAGCGGGCGGCTGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: RTPVQAGQQERL*LAAAAAGGCCG
Trigger: GCCACAGCAGCCGCCCGCTGCCGCTGCCGCCAGCCACAGCCGTTCCTGCTGGCCTGCCTGCACGGGGGTGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CCA 72 bp GGGGCCGCCCGGCGGGCAGGGTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: GAARRAGWNLFR*WCRWAPAPVPG
Trigger: CCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCACCCTGCCCGCCGGGCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR CCA 72 bp GCCGCCCGGCGGGCAGGGTGGAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: AARRAGWNLFRW*CRWAPAPVPGP
Trigger: TGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCACCCTGCCCGCCGGGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR CCA 72 bp CGGGCAGGGTGGAACTTGTTCCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCAGGGCCAGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: RAGWNLFRWWCR*APAPVPGPALG
Trigger: CCCCAGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCACCCTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR TCA 72 bp TGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: WWLRARGRWRCG*RGCGRPGRCPP
Trigger: TGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR CCA 72 bp TGCCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCAGGGCCAGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: CLCWNLFRWWCR*APAPVPGPALG
Trigger: CCCCAGGGCTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp CCTCGACTCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 3 (lower is better)
Translates to: PRLPLPAVLQLAFRPGSRVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...GCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGAGTCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp CCTCGACTCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCATCACCTCAATTCTCTaGGTGTCCCCGAAGTCCTCC +
Preference number: 3 (lower is better)
Translates to: PRLPLPAVLQLAFRPGSRITSIL*VSPKSS
Trigger: GGAGGACTTCGGGGACACCAAGAGAATTGAGGTGAT...GCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGAGTCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 72 bp TGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: CGWCLCWNLFRW*CRWAPAPVPGP
Trigger: TGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 72 bp TGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: CCGWCLCWNLFR*WCRWAPAPVPG
Trigger: CCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 72 bp GCAGAGCTGCCATCAGGGCCTCAGGAGGGCGCGAGCTaGTCAGCTTCACACTCCAGGGGAATCGGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: AELPSGPQEGAS*SASHSRGIGAA
Trigger: GGCTGCTCCGATTCCCCTGGAGTGTGAAGCTGACCAGCTCGCGCCCTCCTGAGGCCCTGATGGCAGCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR GCA 72 bp GGTGCTCGTGCTGTCCTTCCGCCGCTCTGGGATCTCTaGCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGG +
Preference number: 3 (lower is better)
Translates to: GARAVLPPLWDL*LVGVVGAADHG
Trigger: CCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCACGAGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCCTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR GCA 72 bp GGGGTGCAGGGGATGGGCCACAGAAATCGCTATGCCTaGGCTGGCGGTGGTAGGTGGAAGAGGAACTCCGCT +
Preference number: 3 (lower is better)
Translates to: GVQGMGHRNRYA*AGGGRWKRNSA
Trigger: AGCGGAGTTCCTCTTCCACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTGGCCCATCCCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 72 bp CGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGG +
Preference number: 3 (lower is better)
Translates to: RQGRGRVRALGP*WLRARGRWRCG
Trigger: CCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CAA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGCAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGG +
Preference number: 3 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWQSSRS*EMRVTR
Trigger: CCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTG...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CAA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 3 (lower is better)
Translates to: PPVEVKATRERKSKGPGTAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CCA 72 bp AACTCCGCTGCCCTTTGCTGTGGCTGGTGCCTTTGCTaGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCC +
Preference number: 3 (lower is better)
Translates to: NSAALCCGWCLC*NLFRWWCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp CGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: RYRNWGLGDEAEFHPAFFSSGAL*VGRGRT
Trigger: TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGA...GAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CAA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 3 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTCTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: PDIGTGASGMRPSSILPSLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CAA 90 bp CGCTCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGTGCCTTTGCTGGAACTaGTTCCGTTGGTGGTGTCGC +
Preference number: 3 (lower is better)
Translates to: RSGISALLGLWALLTMGLCLCWN*FRWWCR
Trigger: GCGACACCACCAACGGAACAAGTTCCAGCAAAGGCA...CAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp CCGCTCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTCTGTGGCTGGTGCCTTaGCTGGAACTTGTTCCGTTG +
Preference number: 3 (lower is better)
Translates to: PLWDLCLVGVVGAADHGALWLVP*LELVPL
Trigger: CAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAG...AGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR TCA 72 bp TGGACTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTaGGGACACATCTGCCTCCTCCATTGGACTGTGAGC +
Preference number: 3 (lower is better)
Translates to: WTPLYQPCPVAA*GHICLLHWTVS
Trigger: GCTCACAGTCCAATGGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR GCA 72 bp CCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCGCTaGCTGAGGACACATCTGCCTCCTCCATTGGACTGT +
Preference number: 3 (lower is better)
Translates to: PLDSPIPALPSR*LRTHLPPPLDC
Trigger: ACAGTCCAATGGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR GCA 72 bp AGGAACTCCGCTGCCCTTTGCTGTGGCTGGTGCCTTTaGTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: RNSAALCCGWCL*WNLFRWWCRWA
Trigger: CGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CCA 72 bp CACAGAAATCGCTATGCCTGCGCTGGCGGTGGTAGGTaGAAGAGGAACTCCGCTGCCCTTTGCTGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: HRNRYACAGGGR*KRNSAALCCGW
Trigger: CCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR GCA 72 bp GGCGGTGGTAGGTGGAAGAGGAACTCCGCTGCCCTTTaGTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGT +
Preference number: 3 (lower is better)
Translates to: GGGRWKRNSAAL*CGWCLCWNLFR
Trigger: ACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCACCTACCACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CAA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 3 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTAAAGTCACATGCCATTaGTTGAGGACCTGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: PWLRQASPLDSPIPALPSKVTCH*LRTCPL
Trigger: GAGAGGACAGGTCCTCAACAAATGGCATGTGACTTT...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGG +
Preference number: 3 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRQSSRS*EMRVTR
Trigger: CCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTG...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR GCA 72 bp TCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTaGCCTTGGAAGAAAGCCCAGGCCCCTGTCCATAAC +
Preference number: 3 (lower is better)
Translates to: STLPTTLPWLPQ*PWKKAQAPVHN
Trigger: GTTATGGACAGGGGCCTGGGCTTTCTTCCAAGGGCACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR GCA 72 bp TGGAAGAGGAACTCCGCTGCCCTTTGCTGTGGCTGGTaGCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGC +
Preference number: 3 (lower is better)
Translates to: WKRNSAALCCGW*LCWNLFRWWCR
Trigger: GCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR-3UTR CAA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 3 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CAA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCCTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCCTTGCTCCCTGGCCCTaGTATGTGCCATTTGCTGTG +
Preference number: 3 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRLAPWP*YVPFAV
Trigger: CACAGCAAATGGCACATACAAGGGCCAGGGAGCAAG...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTAGTTTGGAGGTCAGCTaGGTGAAGAGGTTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: VTAAAPQETFAEGRVWGISLEVS*VKRLVV
Trigger: CACCACCAACCTCTTCACCAAGCTGACCTCCAAACT...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR CAA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGCAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 3 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR GCA 72 bp GCCCACTTTGCCTCACAGGACTCTCTTAAATCTATCTaGGCTCTCCCCATCTGTCCAGCCCCGACCTCTTTC +
Preference number: 3 (lower is better)
Translates to: AHFASQDSLKSI*ALPICPAPTSF
Trigger: GAAAGAGGTCGGGGCTGGACAGATGGGGAGAGCGCAGATAGATTTAAGAGAGTCCTGTGAGGCAAAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 72 bp CCCTGCCCACTTTCTCTTCTGGGCTCCCCAAGACAATaGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: PCPLSLLGSPRQ*FVRCLCQNPCL
Trigger: GAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGCCCAGAAGAGAAAGTGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 72 bp CTTGGTGTCCCCGAAGTCCTCCTCGGGCTCTGTGTATaGCTTCAACTCCTCACCCTCATAGCCGATGTTGAT +
Preference number: 3 (lower is better)
Translates to: LGVPEVLLGLCV*LQLLTLIADVD
Trigger: ATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAGGAGGACTTCGGGGACACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR GCA 72 bp ACCGTAGGTGACAGCGGCAGCTCCTCAAGAGACCTTTaGAGAGGGGAGGGTGTGGGGTATTTACAAGGATTT +
Preference number: 3 (lower is better)
Translates to: TVGDSGSSSRDL*RGEGVGYLQGF
Trigger: AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCACCTACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CCA 72 bp GCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTGTACAAAGTGCCCCGC +
Preference number: 3 (lower is better)
Translates to: AAPQETFAEGRV*GIYKDLYKVPR
Trigger: GCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CAA 90 bp CGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 3 (lower is better)
Translates to: RYRNWGLGDEAEFHPAFFQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...GAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CAA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCC +
Preference number: 3 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSVELVP*VVSLGA
Trigger: GGCGCCCAGCGACACCACCAACGGAACAAGTTCCAC...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR CAA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTACCCTTCGGGTCAGTTaGGAGGTCAGCTTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRITLRVS*EVSLVK
Trigger: CTTCACCAAGCTGACCTCCAAACTGACCCGAAGGGT...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR GCA 72 bp GACCTGTCCTCTCTCTTGCTCCCTGGCCCTTGTATGTaGCATTTGCTGTGCCTAAAACGCACTCCTATCCAT +
Preference number: 3 (lower is better)
Translates to: DLSSLLLPGPCM*HLLCLKRTPIH
Trigger: ATGGATAGGAGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGACAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 3 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
3UTR-3UTR CAA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSSSGAL*VGRGRT
Trigger: TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGA...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAACTCTCTTAAATTTATaGGGCAACAGGCTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQTLLNL*GNRLQV
Trigger: CACCTGCAGCCTGTTGCCCAATAAATTTAAGAGAGT...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CAA 90 bp CTCCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 3 (lower is better)
Translates to: LPSTLHIAQTRPSLPYLQPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...TTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACCCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 3 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGGTATTTACAAGGATTaGTACAAAGTGCCCCGCGCC +
Preference number: 3 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKGIYKD*YKVPRA
Trigger: GGCGCGGGGCACTTTGTACAAATCCTTGTAAATACC...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTACTCTCTTAAATTTATaGGGCAACAGGCTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: PVSVSESLSPTDRASCLCTLLNL*GNRLQV
Trigger: CACCTGCAGCCTGTTGCCCAATAAATTTAAGAGAGT...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR TCA 72 bp GTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTaGATAAGCTCCGCCCTTCTGTACTGCACAGACTTC +
Preference number: 3 (lower is better)
Translates to: VQLIHFGPKGAV*ISSALLYCTDF
Trigger: GAAGTCTGTGCAGTACAGAAGGGCGGAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR GCA 72 bp AGAAAATCACATGGCCCATTTGGGCCAATGAGAGTCTaGCCTGGGACTTTTGCTGGGAAACTGACAATGAGG +
Preference number: 3 (lower is better)
Translates to: RKSHGPFGPMRV*PGTFAGKLTMR
Trigger: CCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGCCATGTGATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 72 bp ATTTGGGCCAATGAGAGTCTGCCCTGGGACTTTTGCTaGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: IWANESLPWDFC*ETDNEGLSAAE
Trigger: TTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CCA 72 bp ACAGTGATTGGTTTAGAGAAAATCACATGGCCCATTTaGGCCAATGAGAGTCTGCCCTGGGACTTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: TVIGLEKITWPI*ANESLPWDFCW
Trigger: CCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGCCATGTGATTTTCTCTAAACCAATCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CCA 72 bp TCTAGAGTCACAGTGATTGGTTTAGAGAAAATCACATaGCCCATTTGGGCCAATGAGAGTCTGCCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: SRVTVIGLEKIT*PIWANESLPWD
Trigger: GTCCCAGGGCAGACTCTCATTGGCCCAAATGGGCCATGTGATTTTCTCTAAACCAATCACTGTGACTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR-3UTR CAA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTCCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 3 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRIPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR-3UTR CAA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTCAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 3 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
3UTR-3UTR CAA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATGGTATTTACAAGGATTaGTACAAAGTGCCCCGCGCC +
Preference number: 3 (lower is better)
Translates to: QRRWIISPNTAFLLLILHGIYKD*YKVPRA
Trigger: GGCGCGGGGCACTTTGTACAAATCCTTGTAAATACC...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CAA 72 bp CGGGGCCGCCCGGCGGGCAGGGTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRPAGRVELVP*VVSLGARTRAR
Trigger: CCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCACCCTGCCCGCCGGGCGGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR GCA 90 bp CCTCGACTCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCCCACTCCCCGCGGTaGTGCAGCTCGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PRLPLPAVLQLAFRPGSRSHSPR*CSSPSG
Trigger: GCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGA...GCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGAGTCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR TCA 90 bp GAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGCTGGGGCCTCGGGGATaGGGCCGAGTTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: EMRVTRVRKARAVPATRRLGPRG*GRVPSC
Trigger: GCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAG...CCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGCACTCCCCGCGGTGCTaGAGCTCGCCTTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: MRVTRVRKARAVPATRRKHSPRC*SSPSGL
Trigger: CAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTG...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR GCA 90 bp GCCCGCCACACGGCGGAAGAGAACTCCCCGCAAGCCTGGCCGGGGCAGCTGGCACCGTGCTCGTCGGGCTaGGTTTGGGGTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ARHTAEENSPQAWPGQLAPCSSG*VWGAGV
Trigger: CACCCCTGCACCCCAAACGCAGCCCGACGAGCACGG...TGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTTCTCTTCCGCCGTGTGGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGCGCCGGTCCCGGACCTaGCCACCATGGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MRVTRVRKARAVPATRRKRRSRT*PPWKVL
Trigger: CAGCACCTTCCATGGTGGCCAGGTCCGGGACCGGCG...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CCA 90 bp GAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: EMRVTRVRKARAVPATRRRALGP*WLRARG
Trigger: ACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCT...CCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGCCGAGGAGCGGCCACTaGCCAAGGTGCCATGCGTGT +
Preference number: 4 (lower is better)
Translates to: MRVTRVRKARAVPATRRKPRSGH*PRCHAC
Trigger: ACACGCATGGCACCTTGGGCAGTGGCCGCTCCTCGG...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR GCA 90 bp GGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCACTCCCCGCGGTGCTaGAGCTCGCCTTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTCSVGGVAGRPHPCQGQHSPRC*SSPSGL
Trigger: CAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTG...CTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp GAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EMRVTRVRKARAVPATRRRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...CCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CCTCGACTCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PRLPLPAVLQLAFRPGSRNLFRW*CRWAPA
Trigger: TGCGGGCGCCCAGCGACACCACCAACGGAACAAGTT...GCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGAGTCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCAGGAACGGCTGTGGCTaGCGGCAGCGGCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGRNGCG*RQRQRA
Trigger: CGCCCGCTGCCGCTGCCGCCAGCCACAGCCGTTCCT...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGTCGTACTTCTTGCCCTaGAACAGCTCCGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: MRVTRVRKARAVPATRRKSYFLP*NSSGAA
Trigger: TGCCGCCCCGGAGCTGTTTCAGGGCAAGAAGTACGA...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp CCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCCTCCTTCCACAGTTTCTTGCCCTaGAACAGCTCCGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PLPAVLQLAFRPGSRSSFHSFLP*NSSGAA
Trigger: TGCCGCCCCGGAGCTGTTTCAGGGCAAGAAACTGTG...GAAGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCCAGCAGGAACGGCTGTaGCTGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLQQERL*LAAAAA
Trigger: CGCTGCCGCTGCCGCCAGCCACAGCCGTTCCTGCTG...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCCAGCAGGAACGGCTGTaGCTGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGQQERL*LAAAAA
Trigger: CGCTGCCGCTGCCGCCAGCCACAGCCGTTCCTGCTG...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CAA 72 bp GGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGGGTGCGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGTVVAQSSRS*EMRVTRVRKAR
Trigger: CCTGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCCGCGAGCTCAAAAGCTaGGCGCCGAGAACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLRELKS*APRTPG
Trigger: CCCGGGCGTTCTCGGCGCCCAGCTTTTGAGCTCGCG...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCCGCCGGTCCCGGACCTaGCCACCATGGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLRRSRT*PPWKVL
Trigger: CAGCACCTTCCATGGTGGCCAGGTCCGGGACCGGCG...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGGCGGCTGCTGTGGCCTaGCGCAGAGCTGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVAAAVA*RRAAIR
Trigger: CCTGATGGCAGCTCTGCGCCAGGCCACAGCAGCCGC...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCCCTCCTCAGTCTTCCTaGCCAGCAGGAGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LELVPLVVSLGARTRARAPPQSS*PAGGRW
Trigger: CCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG...GGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592207.5
ENST00000592762.5
CDS-3UTR GCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGCCCGGCGGGCAGGGGTaGAGCCTCATGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWPGGQG*SLMGQC
Trigger: ACACTGGCCCATGAGGCTGCACCCCTGCCCGCCGGG...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGCTCGGGCTCTGTGTATaGCTTCAACTCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: MRVTRVRKARAVPATRRKLGLCV*LQLLTL
Trigger: GAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAG...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCAGGTGCTGCGGATGGTaGAACCACGTGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLRCCGW*NHVPGG
Trigger: GCCGCCTGGCACGTGGTTCCACCATCCGCAGCACCT...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGCGGGCGGCTGCTGTaGCCTGGCGCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWSGRLL*PGAELP
Trigger: TGGCAGCTCTGCGCCAGGCCACAGCAGCCGCCCGCT...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCGCCCTGGGACCGTGGTaGCTCAGAGCTCGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGALGPW*LRARGR
Trigger: ACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGC...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
3UTR CAA 72 bp CCCTGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PCPVPKVSSGAL*VGRGRTGLAGG
Trigger: GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp GCCCGCCACACGGCGGAAGAGAACTCCCCGCAAGCCTGGCCGGGGCAGCTGGCACTTAAAAACCGTAGGTaGCAGCGGCAGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: ARHTAEENSPQAWPGQLALKNRR*QRQLLK
Trigger: CTTGAGGAGCTGCCGCTGTCACCTACGGTTTTTAAG...TGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTTCTCTTCCGCCGTGTGGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp GCTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCAGAAATCGCTATGCCTaGGCTGGCGGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGTCSVGGVAGRPHPCQGRNRYA*AGGGRW
Trigger: CCACCTACCACCGCCAGCGCAGGCATAGCGATTTCT...GCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGGCTCGCCTTCCGGCCTaGCAGCCGCTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWARLPA*QPLLLQ
Trigger: CTGAAGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGC...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGGGAAGGTGCTGCGGATaGTGGAACCACGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVGRCCG*WNHVPG
Trigger: GCCTGGCACGTGGTTCCACCATCCGCAGCACCTTCC...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTAGCGGGCGGCTGCTGTaGCCTGGCGCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSSGRLL*PGAELP
Trigger: TGGCAGCTCTGCGCCAGGCCACAGCAGCCGCCCGCT...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp GCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGACCTCCACTTCGAAGTaGGACAGGGGCTCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AGITSGLPYTSPAQSLPETSTSK*DRGSGP
Trigger: CGGGCCCGAGCCCCTGTCCCACTTCGAAGTGGAGGT...CTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CAA 72 bp TTGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLWLVPLLELVP*VVSLGARTRAR
Trigger: CCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CAA 72 bp GTGCTGTCCTTCCGCCGCTCTGGGATCTCTGCCTTGTaGGGGTTGTGGGCGCTGCTGACCATGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLSFRRSGISAL*GLWALLTMGLE
Trigger: CTCCAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
3UTR CAA 72 bp CTCGTGCTGTCCTTCCGCCGCTCTGGGATCTCTGCCTaGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVLSFRRSGISA*LGLWALLTMGL
Trigger: CAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCACGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp TCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCCTCCTCTTTGCTGTGGCTGGTaGCTTTGCTGGAACTTGTTC +
Preference number: 4 (lower is better)
Translates to: SHSPRCCSSPSGLAAAPPLCCGW*LCWNLF
Trigger: GAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAG...AGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTGGAAGGCCAGGGCGGTaGCCGCCACACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIGRPGR*PPHGGR
Trigger: TCTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCC...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCCCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LELVPLVVSLGARTRARAPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...GGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592207.5
ENST00000592762.5
CDS-3UTR CCA 90 bp GGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: GTCSVGGVAGRPHPCQGQPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...CTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGNLFRW*CRWAPA
Trigger: TGCGGGCGCCCAGCGACACCACCAACGGAACAAGTT...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp GGGTGCAGGGGATGGGCCACAGAAATCGCTATGCCTGCGCTGGCGGTGGTAGGTGCTGGCGGTGGTAGGTaGAAGAGGAACTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GCRGWATEIAMPALAVVGAGGGR*KRNSAA
Trigger: GGCAGCGGAGTTCCTCTTCCACCTACCACCGCCAGC...ACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTGGCCCATCCCCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCGGAAGGTGCTGCGGATaGTGGAACCACGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSGRCCG*WNHVPG
Trigger: GCCTGGCACGTGGTTCCACCATCCGCAGCACCTTCC...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGAGGAACGGCTGTGGCTaGCGGCAGCGGCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWRNGCG*RQRQRA
Trigger: CGCCCGCTGCCGCTGCCGCCAGCCACAGCCGTTCCT...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCCCTACAACCTTGCCATaGCTCCCCCAGTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGPTTLP*LPQCPW
Trigger: CCAAGGGCACTGGGGGAGCCATGGCAAGGTTGTAGG...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGCCGAGTTCCGATCGTTaGCCGGGGCCAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVPSSDR*PGPAPS
Trigger: GGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGG...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGCTCCGCCTCCCCCGTaGTCGTCGGGCTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSPPVEVKATRERKSKGPAPPPP*SSGCVW
Trigger: CCAAACGCAGCCCGACGAGCACGGGGGAGGCGGAGC...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTCCCACTCCCCGCGGTaGTGCAGCTCGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PFHPAHSTNPPISTLPTTSHSPR*CSSPSG
Trigger: GCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGA...GGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCCCTACCTACAACCTTaGCATGGCTCCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSPYLQP*HGSPSA
Trigger: GGCACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGG...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCCTCCTTCAGCTCAAAATCTCCGCAGGATaGTCTCACAGTTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PRGAAARLPAWQPLLLQLKISAG*SHSFLP
Trigger: GGGCAAGAAACTGTGAGAGCATCCTGCGGAGATTTT...GAGCTGAAGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGCTGGCGGTGGTAGGTaGAAGAGGAACTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTAGGGR*KRNSAA
Trigger: GGCAGCGGAGTTCCTCTTCCACCTACCACCGCCAGC...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSVLPPL*DLCLVG
Trigger: CCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGAC...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGAGCGGGCGGCTGCTGTaGCCTGGCGCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWSGRLL*PGAELP
Trigger: TGGCAGCTCTGCGCCAGGCCACAGCAGCCGCCCGCT...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCCAGCAGGAACGGCTGTaGCTGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PFHPAHSTNPPISTLPTTQQERL*LAAAAA
Trigger: CGCTGCCGCTGCCGCCAGCCACAGCCGTTCCTGCTG...GGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACAACTCCCCGCAAGCCTaGCCGGGGCAGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHNSPQA*PGQLAD
Trigger: GTCTGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTT...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp ACCTCAGGTCCCCCGATTCTCTCAGGTTCGTCTGCGACCCTTCGGGTCAGTTTGAACTCCCCGCAAGCCTaGCCGGGGCAGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TSGPPILSGSSATLRVSLNSPQA*PGQLAD
Trigger: GTCTGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTT...CAAACTGACCCGAAGGGTCGCAGACGAACCTGAGAGAATCGGGGGACCTGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATGCCCTGGGACCGTGGTaGCTCAGAGCTCGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHALGPW*LRARGR
Trigger: ACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGC...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGGCAACGGGCACCCAGTaGGCGGCTGGACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGATGTQ*AAGPGR
Trigger: CCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGC...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCAAAGTCAGCAATCTTaGTGTTGGCCTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GTCSVGGVAGRPHPCQGQQSQQS*CWPRHP
Trigger: TGGATGCCGAGGCCAACATCAAGATTGCTGACTTTG...CTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR TCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACGGTTGTGGGCGCTGCTaGCCATGGGGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHGCGRC*PWGWRG
Trigger: CCCCCTCCAGCCCCATGGTCAGCAGCGCCCACAACC...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCGGTTGTGGGCGCTGCTaGCCATGGGGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPGCGRC*PWGWRG
Trigger: CCCCCTCCAGCCCCATGGTCAGCAGCGCCCACAACC...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTCGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIRWRCG*RGCGRP
Trigger: TGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACG...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTCTGGGGCCTCGGGGATaGGGCCGAGTTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPPVEVKATRERKSKGPLGPRG*GRVPSC
Trigger: GCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAG...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGCCGAGTTCCGATCGTTaGCCGGGGCCAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKPSSDR*PGPAPS
Trigger: GGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGG...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCAGCAGGCGGTAGTTaGCCACGTGGGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSSAGGS*PRGAAP
Trigger: AGGAGCAGCCCCACGTGGGCAACTACCGCCTGCTGA...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGCCTCCTCAGTCTTCCTaGCCAGCAGGAGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWPPQSS*PAGGRW
Trigger: CCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CTCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGGACCTCCTCAGTCTTCCTaGCCAGCAGGAGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LWDLCLVGVVGAADHGAGPPQSS*PAGGRW
Trigger: CCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG...TCCAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp CGCTCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGAACTCCGCTGCCCTTTaGTGTGGCTGGTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RSGISALLGLWALLTMGLNSAAL*CGWCLC
Trigger: GCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTT...CAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCAGAAATCGCTATGCCTaGGCTGGCGGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSRNRYA*AGGGRW
Trigger: CCACCTACCACCGCCAGCGCAGGCATAGCGATTTCT...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCTCCTCAAGAGACCTTTaGAGAGGGGAGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSSSRDL*RGEGVG
Trigger: CCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGA...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCGGAACCCCTACTAAGTaGAGCTCTGAGTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGGTPTK*SSESGH
Trigger: GTGGCCAGACTCAGAGCTGCACTTAGTAGGGGTTCC...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTCACCCAGTGAGCGGCTaGACCAGGACGGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSHPVSG*TRTGLC
Trigger: ACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTG...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGTCCTCCTCGGGCTCTGTGTATGGCTTCAACTCCTCACCCTCATAGCCGATGTCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SPPRALCMASTPHPHSRCRWWCR*APAPVP
Trigger: TGGCACGGGTGCGGGCGCCCAGCGACACCACCAACG...ACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAGGAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPRWWCR*APAPVP
Trigger: TGGCACGGGTGCGGGCGCCCAGCGACACCACCAACG...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGCGGCTGCTGTGGCCTaGCGCAGAGCTGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKAAAVA*RRAAIR
Trigger: CCTGATGGCAGCTCTGCGCCAGGCCACAGCAGCCGC...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGAACTCCCCGCAAGCCTaGCCGGGGCAGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKNSPQA*PGQLAD
Trigger: GTCTGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTT...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACCCCATTTGGCAACAGTaGCGGGCGCTCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHPIWQQ*RALSPR
Trigger: CCGGGGGCTGAGCGCCCGTCACTGTTGCCAAATGGG...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAATCCTTCTTCTGTGCTaGGCGGCCCCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTILLLC*AAPENS
Trigger: GCTGTTCTCTGGGGCCGCTCAGCACAGAAGAAGGAT...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCCCAAAGGTGCTGTGTaGATAAGCTCCGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSPKGAV*ISSALL
Trigger: CAGAAGGGCGGAGCTTATTCACACAGCACCTTTGGG...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCTGCCCAGTCGCTGCCTaGGGACACATCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RYRNWGLGDEAEFHPAFFCPVAA*GHICLL
Trigger: GAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCA...GAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCCCCCGACCTCTTTCCTaGTCTTCTGACCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGPRPLS*SSDLST
Trigger: AGTTGACAGGTCAGAAGATCAGGAAAGAGGTCGGGG...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATCTGCCCAAGGTGCCATaGGTGTCCGAGTTCCGATCG +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHLPKVP*VSEFRS
Trigger: CGATCGGAACTCGGACACGCATGGCACCTTGGGCAG...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCCCGAGGAGCGGCCACTaGCCAAGGTGCCATGCGTGT +
Preference number: 4 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRPRSGH*PRCHAC
Trigger: ACACGCATGGCACCTTGGGCAGTGGCCGCTCCTCGG...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACTTGCCCACGTGGGGCTaGTCCTCGGGACAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHLPTWG*SSGQEA
Trigger: CGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAA...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCGGCCTGGCGCAGAGCTaGCATCAGGGCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPGLAQS*HQGLRR
Trigger: CCTCCTGAGGCCCTGATGGCAGCTCTGCGCCAGGCC...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGCGGGACAGGAGGCGATaGAGTTCCGGCAACGGGCAC +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWRDRRR*SSGNGH
Trigger: GTGCCCGTTGCCGGAACTCCATCGCCTCCTGTCCCG...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGGCTGGCGGTGGTAGGTaGAAGAGGAACTCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVAGGGR*KRNSAA
Trigger: GGCAGCGGAGTTCCTCTTCCACCTACCACCGCCAGC...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGGAGCAGGGGTGCAGGGGATaGGCCACAGAAATCGCTATG +
Preference number: 4 (lower is better)
Translates to: SGISALLGLWALLTMGLEQGCRG*ATEIAM
Trigger: CATAGCGATTTCTGTGGCCCATCCCCTGCACCCCTG...CTCCAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAATCGTCGGGCTGCGTTTaGGGTGCAGGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQSSGCV*GAGVQG
Trigger: CCCCTGCACCCCTGCACCCCAAACGCAGCCCGACGA...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACCGGACCTGGCCACCATaGAAGGTGCTGCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHRTWPP*KVLRMV
Trigger: CACCATCCGCAGCACCTTCCATGGTGGCCAGGTCCG...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGAGGGGTGCAGCCTCATaGGCCAGTGTGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVRGAAS*ASVGEA
Trigger: TGCCTCTCCCACACTGGCCCATGAGGCTGCACCCCT...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGAAGCGGGCGGCTGCTGTaGCCTGGCGCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRSGRLL*PGAELP
Trigger: TGGCAGCTCTGCGCCAGGCCACAGCAGCCGCCCGCT...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCCCTGGCCGGGGCAGCTaGCAGACCTCCACTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PFHPAHSTNPPISTLPTTPGRGS*QTSTSK
Trigger: CTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGG...GGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCAAACTCCCCGCAAGCCTaGCCGGGGCAGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPNSPQA*PGQLAD
Trigger: GTCTGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTT...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGGCCCTGGGACCGTGGTaGCTCAGAGCTCGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWALGPW*LRARGR
Trigger: ACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGC...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRRALGP*WLRARG
Trigger: ACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCT...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPQSSCPAGGRWRSLRCTEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CCA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPVEVKATRERKSKGPGTEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGCCCGATATAGGAACTaGGGCCTCGGGGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHARYRN*GLGDEA
Trigger: GGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGGC...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGTACTGGAGTAAGAAGTaGCTTAGAGTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: MRVTRVRKARAVPATRRKYWSKK*LRVQCN
Trigger: GTTACACTGGACTCTAAGCCACTTCTTACTCCAGTA...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGCAACCTCCCGACCAGTaGGGATGTGCCGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWQPPDQ*GCAEPA
Trigger: AGCTGGCTCGGCACATCCTCACTGGTCGGGAGGTTG...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTGGTTTAGGCCCTTCATaGTGCGGACTTCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSGLGPS*CGLLGT
Trigger: TGTTCCGAGAAGTCCGCATCATGAAGGGCCTAAACC...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GGCGGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGGGTTGTGGGCGCTGCTaGCCATGGGGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGHFVVLLAGQGLFDFFPGCGRC*PWGWRG
Trigger: CCCCCTCCAGCCCCATGGTCAGCAGCGCCCACAACC...CGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR TCA 90 bp CTCCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPSTLHIAQTRPSLPYLQRWRCG*RGCGRP
Trigger: TGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACG...TTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCGATGCTCTCAGGAATTaGCCAAGCCTCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGDALRN*PSLFPE
Trigger: TTCAGGGAAGAGGCTTGGTCAATTCCTGAGAGCATC...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCTGCCCAGTCGCTGCCTaGGGACACATCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRCPVAA*GHICLL
Trigger: GAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCA...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACCCAGTGGGGACCTTCTaGGCCAGCCAAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHPVGTF*ASQSHS
Trigger: ACTGTGGCTTTGGCTGGCTCAGAAGGTCCCCACTGG...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGCCCGTCGTACTTCTTaGCCTGAAACAGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHARRTS*PETAPG
Trigger: CCCCGGAGCTGTTTCAGGGCAAGAAGTACGACGGGC...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGAGCTCCTTGAGGTTGTaGCCGTCGAAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVSSLRL*PSKGRE
Trigger: CTCCCTGCCCTTCGACGGGCACAACCTCAAGGAGCT...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTCCTCCTCAGTCTTCCTaGCCAGCAGGAGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPQSSCPAGGRWRSLRCTPPQSS*PAGGRW
Trigger: CCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG...AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR GCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTGCTCCGCCTCCCCCGTaGTCGTCGGGCTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRIAPPPP*SSGCVW
Trigger: CCAAACGCAGCCCGACGAGCACGGGGGAGGCGGAGC...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTCCCACTCCCCGCGGTaGTGCAGCTCGCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRISHSPR*CSSPSG
Trigger: GCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGA...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCGATGGTGGAACCACGTaGCAGGCGGCTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSDGGTT*QAAPLP
Trigger: GGGGAGCGGAGCCGCCTGGCACGTGGTTCCACCATC...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAATGCCTAACTAACTCCTACCCCGGCGGGCAGGGGTaGAGCCTCATGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LPLLGFCPGQTQCLTNSYPGGQG*SLMGQC
Trigger: ACACTGGCCCATGAGGCTGCACCCCTGCCCGCCGGG...GTAGGAGTTAGTTAGGCATTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPVEVKATRERKSKGPGTRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCGCCCTGCCCAGTCGCTaGCTGAGGACACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: PFHPAHSTNPPISTLPTTALPSR*LRTHLP
Trigger: AGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGC...GGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCGCCCTGCCCAGTCGCTaGCTGAGGACACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRALPSR*LRTHLP
Trigger: AGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGC...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTCGCGAGCTCAAAAGCTaGGCGCCGAGAACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSRELKS*APRTPG
Trigger: CCCGGGCGTTCTCGGCGCCCAGCTTTTGAGCTCGCG...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCACCTCAATTCTCTTaGTGTCCCCGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGSPQFS*CPRSPP
Trigger: AGGAGGACTTCGGGGACACCAAGAGAATTGAGGTGA...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATCAGGGGTGCAGGGGATaGGCCACAGAAATCGCTATG +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHQGCRG*ATEIAM
Trigger: CATAGCGATTTCTGTGGCCCATCCCCTGCACCCCTG...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTCGTCGGGCTGCGTTTaGGGTGCAGGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSSSGCV*GAGVQG
Trigger: CCCCTGCACCCCTGCACCCCAAACGCAGCCCGACGA...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGAGGTGCTGCGGATGGTaGAACCACGTGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGRCCGW*NHVPGG
Trigger: GCCGCCTGGCACGTGGTTCCACCATCCGCAGCACCT...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGCAGGAGGGCGCGAGCTaGTCAGCTTCACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWQEGAS*SASHSR
Trigger: CCTGGAGTGTGAAGCTGACCAGCTCGCGCCCTCCTG...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTCAGGAGGGCGCGAGCTaGTCAGCTTCACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPPVEVKATRERKSKGPQEGAS*SASHSR
Trigger: CCTGGAGTGTGAAGCTGACCAGCTCGCGCCCTCCTG...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCACCTCCACTTCGAAGTaGGACAGGGGCTCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPTSTSK*DRGSGP
Trigger: CGGGCCCGAGCCCCTGTCCCACTTCGAAGTGGAGGT...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GCCCGCCACACGGCGGAAGAGAACTCCCCGCAAGCCTGGCCGGGGCAGCTGGCACTAATTTTGAGCTGTTaGGAGGAATGGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: ARHTAEENSPQAWPGQLALILSC*EEWKIS
Trigger: GGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAG...TGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTTCTCTTCCGCCGTGTGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGAEGRV*GIYKDL
Trigger: CAAATCCTTGTAAATACCCCACACCCTCCCCTCTGC...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGGGAAAAACCACTGCCTaGATTCCCACGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVGKTTA*IPTPLL
Trigger: AAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCC...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCATCACATGGCCCATTTaGGCCAATGAGAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSITWPI*ANESLP
Trigger: GGGCAGACTCTCATTGGCCCAAATGGGCCATGTGAT...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGCCTACAACCTTGCCATaGCTCCCCCAGTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVPTTLP*LPQCPW
Trigger: CCAAGGGCACTGGGGGAGCCATGGCAAGGTTGTAGG...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCCTGATCTTGGATCCCTaGGGCAGAGAGGCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: PPVEVKATRERKSKGPGTLILDP*GREAPE
Trigger: TTCGGGCGCCTCTCTGCCCCAGGGATCCAAGATCAG...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
3UTR CAA 72 bp CCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCATaGGACTGTGAGCTCTATGAGGGCAGTGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSRCLRTHLPPP*DCELYEGSVGA
Trigger: AGCCCCAACACTGCCCTCATAGAGCTCACAGTCCAATGGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGTCGTACTTCTTGCCCTaGAACAGCTCCGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKSYFLP*NSSGAA
Trigger: TGCCGCCCCGGAGCTGTTTCAGGGCAAGAAGTACGA...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp CTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTTCGTACTTCTTGCCCTaGAACAGCTCCGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LLSLPAQQEVGGGHFVVLSYFLP*NSSGAA
Trigger: TGCCGCCCCGGAGCTGTTTCAGGGCAAGAAGTACGA...AAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR TCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTGTAGATGGCAACTTGTaGCCTCAGGTCCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSVDGNL*PQVPRF
Trigger: GAATCGGGGGACCTGAGGTCACAAGTTGCCATCTAC...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACACTTAAAAACCGTAGGTaGCAGCGGCAGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTLKNRR*QRQLLK
Trigger: CTTGAGGAGCTGCCGCTGTCACCTACGGTTTTTAAG...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTCTGGGGCCTCGGGGATaGGGCCGAGTTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRILGPRG*GRVPSC
Trigger: GCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAG...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGTGGATCAAACCTACCTaGAGCCAGGTGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVWIKPT*SQVPLD
Trigger: GTCCAGGGGCACCTGGCTTCAGGTAGGTTTGATCCA...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTTCTTTCCTGATCTTCTaGCCTGTCAACTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSSFLIF*PVNFPP
Trigger: GGGAGGGAAGTTGACAGGTCAGAAGATCAGGAAAGA...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGCTCCTTGAGGTTGTaGCCGTCGAAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTSSLRL*PSKGRE
Trigger: CTCCCTGCCCTTCGACGGGCACAACCTCAAGGAGCT...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCTGGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGGGCTGGAGTGTGGCTGGTGCCTTTaGTGGAACTTGTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: SGISALLGLWALLTMGLECGWCL*WNLFRW
Trigger: CCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACA...CTCCAGCCCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCGCTCCGCCTCCCCCGTaGTCGTCGGGCTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTAPPPP*SSGCVW
Trigger: CCAAACGCAGCCCGACGAGCACGGGGGAGGCGGAGC...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACGGAGGTTGTTGGGGGTaGTCGTGCTGTCCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHGGCWG*SCCPSA
Trigger: GGCGGAAGGACAGCACGAGCACCCCCAACAACCTCC...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGCACCATGGAAGGTGCTaGGGATGGTGGAACCACGTG +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVHHGRC*GWWNHV
Trigger: CACGTGGTTCCACCATCCGCAGCACCTTCCATGGTG...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATAGCTCTCCCTGCCCCTaGCCAAGGCCTAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHSSPCP*PRPNFE
Trigger: CTCAAAATTAGGCCTTGGGCAGGGGCAGGGAGAGCT...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTCCAATGACCCCACCCTaGCCACTTTCTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIPMTPP*PLSLLG
Trigger: GCCCAGAAGAGAAAGTGGGCAGGGTGGGGTCATTGG...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGGGGCCAATGAGAGTCTaGCCTGGGACTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVGPMRV*PGTFAG
Trigger: CCCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCC...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTCCTGTTACCAGGTCCTaGCCACTTTGCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSPVTRS*PLCLTG
Trigger: TCCTGTGAGGCAAAGTGGGCAGGACCTGGTAACAGG...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACACAGCGGTTAGAGTTCTaGCGTTTAGAGGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTQRLEF*RLEGSR
Trigger: CCTCGATCCCTCTAAACGGCAGAACTCTAACCGCTG...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
CDS-3UTR GCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACACACCTCTTGAGGTTGTaGCCGTCGAAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTHLLRL*PSKGRE
Trigger: CTCCCTGCCCTTCGACGGGCACAACCTCAAGAGGTG...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCGCGAGCTCAAAAGCTaGGCGCCGAGAACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLRELKS*APRTPG
Trigger: CCCGGGCGTTCTCGGCGCCCAGCTTTTGAGCTCGCG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGCGGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGCGCGAGCTCAAAAGCTaGGCGCCGAGAACGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GGHFVVLLAGQGLFDFFPRELKS*APRTPG
Trigger: CCCGGGCGTTCTCGGCGCCCAGCTTTTGAGCTCGCG...CGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSARWWCR*APAPVP
Trigger: TGGCACGGGTGCGGGCGCCCAGCGACACCACCAACG...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LLSLPAQQEVGGGHFVVLWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...AAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCACAGGAGGGCGCGAGCTaGTCAGCTTCACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPQEGAS*SASHSR
Trigger: CCTGGAGTGTGAAGCTGACCAGCTCGCGCCCTCCTG...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAGGAACGGCTGTGGCTaGCGGCAGCGGCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTRNGCG*RQRQRA
Trigger: CGCCCGCTGCCGCTGCCGCCAGCCACAGCCGTTCCT...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCAGCAGGAACGGCTGTaGCTGGCGGCAGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPQQERL*LAAAAA
Trigger: CGCTGCCGCTGCCGCCAGCCACAGCCGTTCCTGCTG...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCAGACCACACACGCCAGTaGGGACCTTCTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPDHTRQ*GPSEPA
Trigger: GGCTGGCTCAGAAGGTCCCCACTGGCGTGTGTGGTC...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGCAAAGTCAGCAATCTTaGTGTTGGCCTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWQSQQS*CWPRHP
Trigger: TGGATGCCGAGGCCAACATCAAGATTGCTGACTTTG...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACCCGGTACTTCCCTCTaGGTACTCGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRPGTSL*VLAPAA
Trigger: AGCTGCGGGAGCGAGTACTCAGAGGGAAGTACCGGG...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCCCCGGTACTTCCCTCTaGGTACTCGCTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSPGTSL*VLAPAA
Trigger: AGCTGCGGGAGCGAGTACTCAGAGGGAAGTACCGGG...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTCCCATTTGGCAACAGTaGCGGGCGCTCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFPIWQQ*RALSPR
Trigger: CCGGGGGCTGAGCGCCCGTCACTGTTGCCAAATGGG...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLRWRCG*RGCGRP
Trigger: TGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGATCCTTCTTCTGTGCTaGGCGGCCCCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWILLLC*AAPENS
Trigger: GCTGTTCTCTGGGGCCGCTCAGCACAGAAGAAGGAT...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCGTGTTGGGGCTGTCTTaGTTACCACTGTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPVEVKATRERKSKGPGTVLGLS*LPLCPQ
Trigger: CTGGGGACACAGTGGTAATCAAGACAGCCCCAACAC...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCACCAGTGGGGACCTTCTaGGCCAGCCAAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPPVGTF*ASQSHS
Trigger: ACTGTGGCTTTGGCTGGCTCAGAAGGTCCCCACTGG...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCCCGAGTTCCGATCGTTaGCCGGGGCCAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTPSSDR*PGPAPS
Trigger: GGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGG...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR GCA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACACACTTCTCCAGCACTTaGGTACTCCATCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTHFSST*VLHHQV
Trigger: TACCTGGTGATGGAGTACGCAAGTGCTGGAGAAGTG...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGGCCCGTCGTACTTCTTaGCCTGAAACAGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGARRTS*PETAPG
Trigger: CCCCGGAGCTGTTTCAGGGCAAGAAGTACGACGGGC...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGATGTTGGGGGTGCTCGTaGTGTCCTTCCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRCWGCS*CPSAAL
Trigger: CAGAGCGGCGGAAGGACAGCACGAGCACCCCCAACA...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACACCCCCGGGCGTTCTGTaGAAACGTAGGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTPPGVL*KRRCFC
Trigger: GCAGAAACACCTACGTTTGCACAGAACGCCCGGGGG...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAAGGAAGGCCAGGGCGGTaGCCGCCACACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQGRPGR*PPHGGR
Trigger: TCTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCC...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGAGCTCTCCCTGCCCCTaGCCAAGGCCTAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVSSPCP*PRPNFE
Trigger: CTCAAAATTAGGCCTTGGGCAGGGGCAGGGAGAGCT...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACATCCTCAAGAGACCTTTaGAGAGGGGAGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTSSRDL*RGEGVG
Trigger: CCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGA...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTTCCTCAAGAGACCTTTaGAGAGGGGAGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPPVEVKATRERKSKGPSSRDL*RGEGVG
Trigger: CCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGA...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAGGCCGAGTTCCATCCTaGCTTCTTCCACGACCATCC +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTGRVPS*LLPRPS
Trigger: GGATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCC...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCCTGGCCCTTGTATGTaGCATTTGCTGTGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSPGPCM*HLLCLK
Trigger: TTTTAGGCACAGCAAATGGCACATACAAGGGCCAGG...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCGGGACAGGAGGCGATaGAGTTCCGGCAACGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLRDRRR*SSGNGH
Trigger: GTGCCCGTTGCCGGAACTCCATCGCCTCCTGTCCCG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACAGTTGCCCTTCCCAATaGTCCTCAGCAGGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHSCPSQ*SSAGGS
Trigger: ACTACCGCCTGCTGAGGACCATTGGGAAGGGCAACT...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGCTGCTGGGATTCAGCTaGGTTTTGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVLLGFS*VLSIIL
Trigger: CAAGATTATCGACAAAACCCAGCTGAATCCCAGCAG...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CCA 90 bp TTGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCCTCGGGCTCTGTGTATaGCTTCAACTCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LLWLVPLLELVPLVVSLGLGLCV*LQLLTL
Trigger: GAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAG...GCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp GCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCTCACCTCAATTCTCTTaGTGTCCCCGAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AVAGAFAGTCSVGGVAGRSPQFS*CPRSPP
Trigger: AGGAGGACTTCGGGGACACCAAGAGAATTGAGGTGA...GCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCRWWCR*APAPVP
Trigger: TGGCACGGGTGCGGGCGCCCAGCGACACCACCAACG...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAATGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp TTGCTGTGGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGGCTGGTGCCTTTGCTaGAACTTGTTCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLWLVPLLELVPLVVSLGGWCLC*NLFRWW
Trigger: CCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCC...GCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACACAGGGGTGCAGGGGATaGGCCACAGAAATCGCTATG +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTQGCRG*ATEIAM
Trigger: CATAGCGATTTCTGTGGCCCATCCCCTGCACCCCTG...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGCTCGCCTTCCGGCCTaGCAGCCGCTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAARLPA*QPLLLQ
Trigger: CTGAAGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACGGACCTGGCCACCATaGAAGGTGCTGCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRRTWPP*KVLRMV
Trigger: CACCATCCGCAGCACCTTCCATGGTGGCCAGGTCCG...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGCGGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGACCTCCACTTCGAAGTaGGACAGGGGCTCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GGHFVVLLAGQGLFDFFPTSTSK*DRGSGP
Trigger: CGGGCCCGAGCCCCTGTCCCACTTCGAAGTGGAGGT...CGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CCA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTGCCCGATATAGGAACTaGGGCCTCGGGGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: PVSVSESLSPTDRASCLCARYRN*GLGDEA
Trigger: GGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGGC...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCGGTTTAGGCCCTTCATaGTGCGGACTTCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: PPVEVKATRERKSKGPGTGLGPS*CGLLGT
Trigger: TGTTCCGAGAAGTCCGCATCATGAAGGGCCTAAACC...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATCACTTGACCTTCCTTTaGGGAACCCCTACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHHLTFL*GTPTKC
Trigger: GCACTTAGTAGGGGTTCCTCAAAGGAAGGTCAAGTG...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCTTCCCTGAAGTTCCCTaGACTTCCATGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPVEVKATRERKSKGPGTFPEVP*TSMVPQ
Trigger: CTGGGGAACCATGGAAGTTCAGGGAACTTCAGGGAA...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGTCAGCAGGCGGTAGTTaGCCACGTGGGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLSAGGS*PRGAAP
Trigger: AGGAGCAGCCCCACGTGGGCAACTACCGCCTGCTGA...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACCCTCCTCAGTCTTCCTaGCCAGCAGGAGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKTMVCPVSVSESLSPTDPPQSS*PAGGRW
Trigger: CCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG...GTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAACTCCGCTGCCCTTTaGTGTGGCTGGTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHNSAAL*CGWCLC
Trigger: GCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTT...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AGTCCTCCTCGGGCTCTGTGTATGGCTTCAACTCCTCACCCTCATAGCCGATGTGAAGAGGAACTCCGCTaGCCTTTGCTGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPPRALCMASTPHPHSRCEEELR*PLLWLV
Trigger: CACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTC...ACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAGGAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACCCGTGCTCGTCGGGCTaGGTTTGGGGTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANPCSSG*VWGAGV
Trigger: CACCCCTGCACCCCAAACGCAGCCCGACGAGCACGG...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCACTCCCCGCGGTGCTaGAGCTCGCCTTCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLHSPRC*SSPSGL
Trigger: CAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACCACCATGGAAGGTGCTaGGGATGGTGGAACCACGTG +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHHHGRC*GWWNHV
Trigger: CACGTGGTTCCACCATCCGCAGCACCTTCCATGGTG...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACGGCCTGGCGCAGAGCTaGCATCAGGGCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANGLAQS*HQGLRR
Trigger: CCTCCTGAGGCCCTGATGGCAGCTCTGCGCCAGGCC...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAGGAAGGCCAGGGCGGTaGCCGCCACACGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQGRPGR*PPHGGR
Trigger: TCTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCC...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGGGCCGAGTTCCATCCTaGCTTCTTCCACGACCATCC +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGGRVPS*LLPRPS
Trigger: GGATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCC...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTTCTCTTAAATCTATCTaGGCTCTCCCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSSLKSI*ALPICP
Trigger: TGGACAGATGGGGAGAGCGCAGATAGATTTAAGAGA...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTCAGCGGTTAGAGTTCTaGCGTTTAGAGGGATCGAGG +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIQRLEF*RLEGSR
Trigger: CCTCGATCCCTCTAAACGGCAGAACTCTAACCGCTG...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
CDS-3UTR CCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATCAATCTGTCGGAACTTaGCTCGAGCTTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHQSVGT*LELPSP
Trigger: AGGAGAAGGAAGCTCGAGCCAAGTTCCGACAGATTG...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTACTTCGTTGTACTTCTaGCTGGTCAAGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: PWLRQASPLDSPIPALPSTSLYF*LVKDSL
Trigger: CAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGT...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTCCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LLSLPAQQEVGGGHFVVLPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...AAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCCGTTGGTGGTGTCGCTaGGCGCCCGCACCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLRWWCR*APAPVP
Trigger: TGGCACGGGTGCGGGCGCCCAGCGACACCACCAACG...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRNLFRW*CRWAPA
Trigger: TGCGGGCGCCCAGCGACACCACCAACGGAACAAGTT...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PVSVSESLSPTDRASCLCNLFRW*CRWAPA
Trigger: TGCGGGCGCCCAGCGACACCACCAACGGAACAAGTT...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAGGCTGGTGCCTTTGCTaGAACTTGTTCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTGWCLC*NLFRWW
Trigger: CCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCC...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGGGCTGGTGCCTTTGCTaGAACTTGTTCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWGWCLC*NLFRWW
Trigger: CCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCC...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACGCTGCCCTTTGCTGTaGCTGGTGCCTTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPSTLHIAQTRPSLPYLQRCPLL*LVPLLE
Trigger: TTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCG...TTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATTCGTCGGGCTGCGTTTaGGGTGCAGGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VVLLAGQGLFDFFPCVAHSSGCV*GAGVQG
Trigger: CCCCTGCACCCCTGCACCCCAAACGCAGCCCGACGA...ATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PKTMVCPVSVSESLSPTDVLPPL*DLCLVG
Trigger: CCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGAC...GTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFRALGP*WLRARG
Trigger: ACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCT...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCAGGGCCCTGGGACCGTaGTGGCTCAGAGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSARALGP*WLRARG
Trigger: ACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCT...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCGCCTGGGGCAGGAAGTaGGGGTTTGAGCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTAWGRK*GFEREG
Trigger: CCCCTCACGCTCAAACCCCCACTTCCTGCCCCAGGC...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACGCACTGGGCCTGGCATaGAGTAGGCATGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHALGLA*SRHGSM
Trigger: CATTGACCCATGCCTACTCCATGCCAGGCCCAGTGC...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGTTCCCTGAACTTCCATaGTTCCCCAGTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKFPELP*FPSAMG
Trigger: CCCCATGGCACTGGGGAACCATGGAAGTTCAGGGAA...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGCCCGGCGGGCAGGGTaGAACTTGTTCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFARRAG*NLFRWW
Trigger: CCACCAACGGAACAAGTTCCACCCTGCCCGCCGGGC...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR TCA 90 bp TGGGCCACAGAAATCGCTATGCCTGCGCTGGCGGTGGTAGGTGGAAGAGGAACTCAAAGTCAGCAATCTTaGTGTTGGCCTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: WATEIAMPALAVVGGRGTQSQQS*CWPRHP
Trigger: TGGATGCCGAGGCCAACATCAAGATTGCTGACTTTG...AGTTCCTCTTCCACCTACCACCGCCAGCGCAGGCATAGCGATTTCTGTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR TCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAAGCTCCCGCAGCTCCTTaGGGTTGTGCCCGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQAPAAP*GCARRR
Trigger: CCTTCGACGGGCACAACCTCAAGGAGCTGCGGGAGC...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCAGTAGATGGCAACTTGTaGCCTCAGGTCCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPVDGNL*PQVPRF
Trigger: GAATCGGGGGACCTGAGGTCACAAGTTGCCATCTAC...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGGGCGGTTTCCGTTTaGTCCCAAGGTAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQGAVSV*SQGRWQ
Trigger: TTGCCATCTACCTTGGGATCAAACGGAAACCGCCCC...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCGGGGCGGTTTCCGTTTaGTCCCAAGGTAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPGAVSV*SQGRWQ
Trigger: TTGCCATCTACCTTGGGATCAAACGGAAACCGCCCC...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTCGTTGGAGATGCGGGTaGCGAGGGTGCGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCRWRCG*RGCGRP
Trigger: TGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACG...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR TCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACACTTAAAAACCGTAGGTaGCAGCGGCAGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTLKNRR*QRQLLK
Trigger: CTTGAGGAGCTGCCGCTGTCACCTACGGTTTTTAAG...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCCGAGTTCCGATCGTTaGCCGGGGCCAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLPSSDR*PGPAPS
Trigger: GGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCCGCTCTGGGATCTCTaGCTTGTTGGGGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLPLWDL*LVGVVG
Trigger: GCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCGGCCTGGCGCAGAGCTaGCATCAGGGCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLGLAQS*HQGLRR
Trigger: CCTCCTGAGGCCCTGATGGCAGCTCTGCGCCAGGCC...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGGCCTGGCGCAGAGCTaGCATCAGGGCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HFVVLLAGQGLFDFFPCVGLAQS*HQGLRR
Trigger: CCTCCTGAGGCCCTGATGGCAGCTCTGCGCCAGGCC...TACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR GCA 90 bp CGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCGAAAGGAAAAACCACTaGCTGGATTCCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: RYRNWGLGDEAEFHPAFFERKNH*LDSHAS
Trigger: AGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTC...GAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp CCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACGGGCCAATGAGAGTCTaGCCTGGGACTTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKTMVCPVSVSESLSPTDGPMRV*PGTFAG
Trigger: CCCAGCAAAAGTCCCAGGGCAGACTCTCATTGGCCC...GTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAACCTGTCCTCTCTCTTaGTCCCTGGCCCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTTCPLS*SLALVC
Trigger: ACATACAAGGGCCAGGGAGCAAGAGAGAGGACAGGT...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGACTTACAAAGTCACATaGCATTTGTTGAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVTYKVT*HLLRTC
Trigger: ACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGT...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CCA 90 bp CATTTGTCTTTCATGATTTGCTCGAGAGTACAGCGTTTAGCTGGGTTCAGCACCGCTCGCCTTCCGGCCTaGCAGCCGCTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: HLSFMICSRVQRLAGFSTARLPA*QPLLLQ
Trigger: CTGAAGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGC...GGTGCTGAACCCAGCTAAACGCTGTACTCTCGAGCAAATCATGAAAGACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCAGGAGGGCGCGAGCTaGTCAGCTTCACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPQEGAS*SASHSR
Trigger: CCTGGAGTGTGAAGCTGACCAGCTCGCGCCCTCCTG...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAGCGGCTGCTGTGGCCTaGCGCAGAGCTGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQAAAVA*RRAAIR
Trigger: CCTGATGGCAGCTCTGCGCCAGGCCACAGCAGCCGC...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCGGCTGCTGTGGCCTaGCGCAGAGCTGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSAAAVA*RRAAIR
Trigger: CCTGATGGCAGCTCTGCGCCAGGCCACAGCAGCCGC...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACCTGGCCGGGGCAGCTaGCAGACCTCCACTTCGAAG +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTPGRGS*QTSTSK
Trigger: CTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTCTATCCATGTCTAGCTaGCTCCTTCTCCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGILSMSS*LLLLQE
Trigger: TTCCTGGAGGAGAAGGAGCCAGCTAGACATGGATAG...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCTGATCTTGGATCCCTaGGGCAGAGAGGCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLLILDP*GREAPE
Trigger: TTCGGGCGCCTCTCTGCCCCAGGGATCCAAGATCAG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
3UTR CAA 72 bp GCCCACTTTCTCTTCTGGGCTCCCCAAGACAATGGTTaGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AHFLFWAPQDNG*SGVCVRIPVSH
Trigger: GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGCCCAGAAGAGAAAGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTGCAACGGGCACCCAGTaGGCGGCTGGACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSATGTQ*AAGPGR
Trigger: CCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGC...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGGCTCCCGCAGCTCCTTaGGGTTGTGCCCGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLAPAAP*GCARRR
Trigger: CCTTCGACGGGCACAACCTCAAGGAGCTGCGGGAGC...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGTCCATTTGTCTTTCATaGTTTGCTCGAGAGTACAGC +
Preference number: 4 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWSICLS*FAREYS
Trigger: GCTGTACTCTCGAGCAAATCATGAAAGACAAATGGA...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTATCCTTCTTCTGTGCTaGGCGGCCCCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTILLLC*AAPENS
Trigger: GCTGTTCTCTGGGGCCGCTCAGCACAGAAGAAGGAT...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTCCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAATTCCCTGAAGTTCCCTaGACTTCCATGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPSTLHIAQTRPSLPYLQFPEVP*TSMVPQ
Trigger: CTGGGGAACCATGGAAGTTCAGGGAACTTCAGGGAA...TTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTGTGTTGGGGCTGTCTTaGTTACCACTGTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSVLGLS*LPLCPQ
Trigger: CTGGGGACACAGTGGTAATCAAGACAGCCCCAACAC...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGGTTCGTCTGCGACCTaGTCTTGGATCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFGSSAT*SWIPGA
Trigger: TGCCCCAGGGATCCAAGATCAGGTCGCAGACGAACC...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
CDS-3UTR TCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGGTTCGTCTGCGACCTaGTCTTGGATCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAGSSAT*SWIPGA
Trigger: TGCCCCAGGGATCCAAGATCAGGTCGCAGACGAACC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
CDS-3UTR GCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCACAGCTTCTGCAGGCTaGTGGGATTCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPTASAG*WDSAGF
Trigger: AAACCCAGCTGAATCCCAGCAGCCTGCAGAAGCTGT...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGCCCGTCGTACTTCTTaGCCTGAAACAGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAARRTS*PETAPG
Trigger: CCCCGGAGCTGTTTCAGGGCAAGAAGTACGACGGGC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp TGGCTTCAACTCCTCACCCTCATAGCCGATGTTGATCCATTTGTCTTTCATGATCCGTGCTCGTCGGGCTaGGTTTGGGGTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: WLQLLTLIADVDPFVFHDPCSSG*VWGAGV
Trigger: CACCCCTGCACCCCAAACGCAGCCCGACGAGCACGG...ATCATGAAAGACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRIQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGAGGAACCCCTACTAAGTaGAGCTCTGAGTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRGTPTK*SSESGH
Trigger: GTGGCCAGACTCAGAGCTGCACTTAGTAGGGGTTCC...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCCCCCAGCACAGAGGATaGTCTCAGGAATTGACCAAG +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPPQHRG*SQELTK
Trigger: CTTGGTCAATTCCTGAGAGCATCCTCTGTGCTGGGG...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCCCTGTTACCAGGTCCTaGCCACTTTGCCTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRPVTRS*PLCLTG
Trigger: TCCTGTGAGGCAAAGTGGGCAGGACCTGGTAACAGG...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTAGTTGCCCTTCCCAATaGTCCTCAGCAGGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: PVSVSESLSPTDRASCLCSCPSQ*SSAGGS
Trigger: ACTACCGCCTGCTGAGGACCATTGGGAAGGGCAACT...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATCTGCTGGGATTCAGCTaGGTTTTGTCGATAATCTTG +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHLLGFS*VLSIIL
Trigger: CAAGATTATCGACAAAACCCAGCTGAATCCCAGCAG...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCGCTGCCCTTTGCTGTaGCTGGTGCCTTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLRCPLL*LVPLLE
Trigger: TTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTVLPPL*DLCLVG
Trigger: CCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGAC...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCCTGGCCGGGGCAGCTaGCAGACCTCCACTTCGAAG +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLPGRGS*QTSTSK
Trigger: CTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGCCCTGGGACTTTTGCTaGGAAACTGACAATGAGGGT +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWPWDFC*ETDNEG
Trigger: ACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGG...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGCTATCCATGTCTAGCTaGCTCCTTCTCCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKLSMSS*LLLLQE
Trigger: TTCCTGGAGGAGAAGGAGCCAGCTAGACATGGATAG...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTTGTGCCGAGCCAGCTTaGCTTTGGCAAAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTCAEPA*LWQSCP
Trigger: AGGGCAACTTTGCCAAAGTCAAGCTGGCTCGGCACA...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGGGGGCGGTTTCCGTTTaGTCCCAAGGTAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLGAVSV*SQGRWQ
Trigger: TTGCCATCTACCTTGGGATCAAACGGAAACCGCCCC...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCATCCTTCTTCTGTGCTaGGCGGCCCCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTILLLC*AAPENS
Trigger: GCTGTTCTCTGGGGCCGCTCAGCACAGAAGAAGGAT...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR TCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAACCAAGCCTCTTCCCTaGAGTTCCCTGAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQTKPLP*SSLNFH
Trigger: ATGGAAGTTCAGGGAACTTCAGGGAAGAGGCTTGGT...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGCCCGTCGTACTTCTTaGCCTGAAACAGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCARRTS*PETAPG
Trigger: CCCCGGAGCTGTTTCAGGGCAAGAAGTACGACGGGC...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR GCA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTTGTGGCTGGTGCCTTTaGTGGAACTTGTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PVSVSESLSPTDRASCLCCGWCL*WNLFRW
Trigger: CCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACA...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCCTTTGCTGTGGCTGGTaGCTTTGCTGGAACTTGTTC +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPLCCGW*LCWNLF
Trigger: GAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAG...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCTGGAGAAGAGGAACTCCGCTaGCCTTTGCTGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GTFAGKLTMRVFLLQKAGEEELR*PLLWLV
Trigger: CACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTC...TCCAGCTTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGGGAGGTTGTTGGGGGTaGTCGTGCTGTCCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLGGCWG*SCCPSA
Trigger: GGCGGAAGGACAGCACGAGCACCCCCAACAACCTCC...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTGATGGTGGAACCACGTaGCAGGCGGCTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSDGGTT*QAAPLP
Trigger: GGGGAGCGGAGCCGCCTGGCACGTGGTTCCACCATC...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACGGCCACCATGGAAGGTaGTGCGGATGGTGGAACCAC +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANGHHGR*CGWWNH
Trigger: GTGGTTCCACCATCCGCAGCACCTTCCATGGTGGCC...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGGCCGAGTTCCATCCTaGCTTCTTCCACGACCATCC +
Preference number: 4 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFGRVPS*LLPRPS
Trigger: GGATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCC...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR GCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGTCCGCCCTTCTGTACTaGACAGACTTCAACCACTAT +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWSALLY*TDFNHY
Trigger: ATAGTGGTTGAAGTCTGTGCAGTACAGAAGGGCGGA...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTCCTGGCCCTTGTATGTaGCATTTGCTGTGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PSPPVEVKATRERKSKGPPGPCM*HLLCLK
Trigger: TTTTAGGCACAGCAAATGGCACATACAAGGGCCAGG...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACCTGTCCTCTCTCTTaGTCCCTGGCCCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRTCPLS*SLALVC
Trigger: ACATACAAGGGCCAGGGAGCAAGAGAGAGGACAGGT...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGCGGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGGCTCTCACAGTTTCTTaGCCTGAAACAGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GGHFVVLLAGQGLFDFFPALTVS*PETAPG
Trigger: CCCCGGAGCTGTTTCAGGGCAAGAAACTGTGAGAGC...CGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTCACCTCTTGAGGTTGTaGCCGTCGAAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCHLLRL*PSKGRE
Trigger: CTCCCTGCCCTTCGACGGGCACAACCTCAAGAGGTG...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGAGCTTCTGCAGGCTGCTaGGATTCAGCTGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRASAGC*DSAGFC
Trigger: ACAAAACCCAGCTGAATCCCAGCAGCCTGCAGAAGC...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTAACTTGTTCCGTTGGTaGTGTCGCTGGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCNLFRW*CRWAPA
Trigger: TGCGGGCGCCCAGCGACACCACCAACGGAACAAGTT...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp GTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VVLLAGQGLFDFFPCVAHWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...ATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTAGGGGTGCAGCCTCATaGGCCAGTGTGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFRGAAS*ASVGEA
Trigger: TGCCTCTCCCACACTGGCCCATGAGGCTGCACCCCT...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACGGAAAAACCACTGCCTaGATTCCCACGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHGKTTA*IPTPLL
Trigger: AAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCC...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATTACTGGAGTAAGAAGTaGCTTAGAGTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHYWSKK*LRVQCN
Trigger: GTTACACTGGACTCTAAGCCACTTCTTACTCCAGTA...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTACTGGAGTAAGAAGTaGCTTAGAGTCCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PDIGTGASGMRPSSILPSYWSKK*LRVQCN
Trigger: GTTACACTGGACTCTAAGCCACTTCTTACTCCAGTA...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGCTCTCTCTTGCTCCCTaGCCCTTGTATGTGCCATTT +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGLSLAP*PLYVPF
Trigger: AAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAG...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
3UTR CAA 72 bp TCAGCAGCTCTCCCTGCCCCTGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGGAAGATTTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SAALPAPAQGLI*SCWEEWKISSV
Trigger: AACTGAGGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGCAGGGGCAGGGAGAGCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCTGTGCCGAGCCAGCTTaGCTTTGGCAAAGTTGCCCT +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSACAEPA*LWQSCP
Trigger: AGGGCAACTTTGCCAAAGTCAAGCTGGCTCGGCACA...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAACACCCGTGGGGTGCCTaGGCTGTTTTCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKHPWGA*AVFFPI
Trigger: AATGGGAAAGAAAACAGCTCAGGCACCCCACGGGTG...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCACCCGTGGGGTGCCTaGGCTGTTTTCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPHPWGA*AVFFPI
Trigger: AATGGGAAAGAAAACAGCTCAGGCACCCCACGGGTG...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGTAGATGGCAACTTGTaGCCTCAGGTCCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAVDGNL*PQVPRF
Trigger: GAATCGGGGGACCTGAGGTCACAAGTTGCCATCTAC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR TCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAACAGCATTTCTCTTGCTaGTTCTCCATCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQQHFSC*FSIHAQ
Trigger: TTGGGCATGGATGGAGAATCAGCAAGAGAAATGCTG...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAGCCCATTTGGGCCAATaGGAGTCTGCCCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTAHLGQ*ESALGL
Trigger: AAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGC...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTACCAAGCCTCTTCCCTaGAGTTCCCTGAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSTKPLP*SSLNFH
Trigger: ATGGAAGTTCAGGGAACTTCAGGGAAGAGGCTTGGT...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAACGACCAGTGAGGATGTaGCGAGCCAGCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKRPVRM*RASLTL
Trigger: CAAAGTCAAGCTGGCTCGGCACATCCTCACTGGTCG...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCTGGACGACCAGTGAGGATGTaGCGAGCCAGCTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: GTFAGKLTMRVFLLQKAGRPVRM*RASLTL
Trigger: CAAAGTCAAGCTGGCTCGGCACATCCTCACTGGTCG...TCCAGCTTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTACAGCTTCTGCAGGCTaGTGGGATTCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRITASAG*WDSAGF
Trigger: AAACCCAGCTGAATCCCAGCAGCCTGCAGAAGCTGT...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACAGAAATCGCTATGCCTaGGCTGGCGGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANRNRYA*AGGGRW
Trigger: CCACCTACCACCGCCAGCGCAGGCATAGCGATTTCT...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGGCCACCATGGAAGGTaGTGCGGATGGTGGAACCAC +
Preference number: 4 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFGHHGR*CGWWNH
Trigger: GTGGTTCCACCATCCGCAGCACCTTCCATGGTGGCC...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTCTCTCAGGTTCGTCTaGGACCCTTCGGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRISLRFV*DPSGQF
Trigger: AAACTGACCCGAAGGGTCGCAGACGAACCTGAGAGA...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000620044.4
CDS-3UTR GCA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCAGCTCTCCCTGCCCCTaGCCAAGGCCTAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSASSPCP*PRPNFE
Trigger: CTCAAAATTAGGCCTTGGGCAGGGGCAGGGAGAGCT...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGAGGATTTGTACAAAGTaGCCCGCGCCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLRICTK*PAPAWG
Trigger: GCCCCAGGCTGGCGCGGGGCACTTTGTACAAATCCT...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCCATGGCTCCCCCAGTaGCCTTGGAAGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLPWLPQ*PWKKAQ
Trigger: CTGGGCTTTCTTCCAAGGGCACTGGGGGAGCCATGG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGTCTCTTAAATCTATCTaGGCTCTCCCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWSLKSI*ALPICP
Trigger: TGGACAGATGGGGAGAGCGCAGATAGATTTAAGAGA...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCCTGGCCGGGGCAGCTaGCAGACCTCCACTTCGAAG +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSPGRGS*QTSTSK
Trigger: CTTCGAAGTGGAGGTCTGCCAGCTGCCCCGGCCAGG...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCGGAAAAACCACTGCCTaGATTCCCACGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSGKTTA*IPTPLL
Trigger: AAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCC...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAATGAGAGTCTGCCCTaGGACTTTTGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHNESLP*DFCWET
Trigger: AGTTTCCCAGCAAAAGTCCCAGGGCAGACTCTCATT...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCCCAGCTTATTCATTTTaGCCCCAAAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRETEVMIKGESPPWPLPPAYSF*PQRCCV
Trigger: CACACAGCACCTTTGGGGCCAAAATGAATAAGCTGG...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTAATTACCCAGTTCTCTaGAGATATACCACATACTCC +
Preference number: 4 (lower is better)
Translates to: VTAAAPQETFAEGRVWGINYPVL*RYTTYS
Trigger: GGAGTATGTGGTATATCTTCAGAGAACTGGGTAATT...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGTGGATCAAACCTACCTaGAGCCAGGTGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLWIKPT*SQVPLD
Trigger: GTCCAGGGGCACCTGGCTTCAGGTAGGTTTGATCCA...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAATGCCTAACTAACTCCTACCACTTGACCTTCCTTTaGGGAACCCCTACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPLLGFCPGQTQCLTNSYHLTFL*GTPTKC
Trigger: GCACTTAGTAGGGGTTCCTCAAAGGAAGGTCAAGTG...GTAGGAGTTAGTTAGGCATTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACCCAAAGGTGCTGTGTaGATAAGCTCCGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTPKGAV*ISSALL
Trigger: CAGAAGGGCGGAGCTTATTCACACAGCACCTTTGGG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGGATGCTCTCAGGAATTaGCCAAGCCTCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLDALRN*PSLFPE
Trigger: TTCAGGGAAGAGGCTTGGTCAATTCCTGAGAGCATC...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATTTGCCCACGTGGGGCTaGTCCTCGGGACAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QRRWIISPNTAFLLLILHLPTWG*SSGQEA
Trigger: CGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAA...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTCACTTCTCCAGCACTTaGGTACTCCATCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTHFSST*VLHHQV
Trigger: TACCTGGTGATGGAGTACGCAAGTGCTGGAGAAGTG...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAATGTGGCTGGTGCCTTTaGTGGAACTTGTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKCGWCL*WNLFRW
Trigger: CCAACGGAACAAGTTCCAGCAAAGGCACCAGCCACA...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCGAAGAGGAACTCCGCTaGCCTTTGCTGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLEEELR*PLLWLV
Trigger: CACCAGCCACAGCAAAGGGCAGCGGAGTTCCTCTTC...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TGGCTTCAACTCCTCACCCTCATAGCCGATGTTGATCCATTTGTCTTTCATGATCCGCTCTGGGATCTCTaGCTTGTTGGGGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WLQLLTLIADVDPFVFHDPLWDL*LVGVVG
Trigger: GCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGG...ATCATGAAAGACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCCCCCCGGGCGTTCTGTaGAAACGTAGGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLPPGVL*KRRCFC
Trigger: GCAGAAACACCTACGTTTGCACAGAACGCCCGGGGG...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTTCTCTCAGGTTCGTCTaGGACCCTTCGGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFSLRFV*DPSGQF
Trigger: AAACTGACCCGAAGGGTCGCAGACGAACCTGAGAGA...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000620044.4
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCAAAGTCTCCTCAGGTaGCCTCTTGGTAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLQSLLR*PLGRAR
Trigger: CCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAACCAATGACCCCACCCTaGCCACTTTCTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQPMTPP*PLSLLG
Trigger: GCCCAGAAGAGAAAGTGGGCAGGGTGGGGTCATTGG...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAACCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACCAGCAGGAGGTAGGTaGCGGTCACTTCGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTPAGGR*RSLRCT
Trigger: AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp TGTGTATGGCTTCAACTCCTCACCCTCATAGCCGATGTTGATCCATTTGTCTTTTGGAACTTGTTCCGTTaGTGGTGTCGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: CVWLQLLTLIADVDPFVFWNLFR*WCRWAP
Trigger: GGGCGCCCAGCGACACCACCAACGGAACAAGTTCCA...AAAGACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CATTTGTCTTTCATGATTTGCTCGAGAGTACAGCGTTTAGCTGGGTTCAGCACCCGCTGCCCTTTGCTGTaGCTGGTGCCTTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLSFMICSRVQRLAGFSTRCPLL*LVPLLE
Trigger: TTCCAGCAAAGGCACCAGCCACAGCAAAGGGCAGCG...GGTGCTGAACCCAGCTAAACGCTGTACTCTCGAGCAAATCATGAAAGACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTGAGGGAGGACAGGACTaGCTGGAGGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSEGGQD*LEAPGR
Trigger: CCTTCCTGGAGCCTCCAGCCAGTCCTGTCCTCCCTC...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGGCACTGGGCCTGGCATaGAGTAGGCATGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLALGLA*SRHGSM
Trigger: CATTGACCCATGCCTACTCCATGCCAGGCCCAGTGC...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCGCCCACTTTCTCTTCTaGGCTCCCCAAGACAATGGT +
Preference number: 4 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPAHFLF*APQDNG
Trigger: ACCATTGTCTTGGGGAGCCCAGAAGAGAAAGTGGGC...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTGACCACACACGCCAGTaGGGACCTTCTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSDHTRQ*GPSEPA
Trigger: GGCTGGCTCAGAAGGTCCCCACTGGCGTGTGTGGTC...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAAGCTCTCACAGTCTGTTaGCATGTAGAAAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQALTVC*HVERDP
Trigger: CGGGTCCCTTTCTACATGTCAACAGACTGTGAGAGC...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACTCCATTTGTCTTTCATaGTTTGCTCGAGAGTACAGC +
Preference number: 4 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHSICLS*FAREYS
Trigger: GCTGTACTCTCGAGCAAATCATGAAAGACAAATGGA...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCGTAGATGGCAACTTGTaGCCTCAGGTCCCCCGATTC +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLVDGNL*PQVPRF
Trigger: GAATCGGGGGACCTGAGGTCACAAGTTGCCATCTAC...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGGGGGCGGTTTCCGTTTaGTCCCAAGGTAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLGAVSV*SQGRWQ
Trigger: TTGCCATCTACCTTGGGATCAAACGGAAACCGCCCC...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTCCGCTCTGGGATCTCTaGCTTGTTGGGGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSPLWDL*LVGVVG
Trigger: GCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGG...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGCTCTCCCTGCCCCTaGCCAAGGCCTAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQSSPCP*PRPNFE
Trigger: CTCAAAATTAGGCCTTGGGCAGGGGCAGGGAGAGCT...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACCCCAGCACAGAGGATaGTCTCAGGAATTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTPQHRG*SQELTK
Trigger: CTTGGTCAATTCCTGAGAGCATCCTCTGTGCTGGGG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCCCTACCTACAACCTTaGCATGGCTCCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSPYLQP*HGSPSA
Trigger: GGCACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGG...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAAGCTTCTGCAGGCTGCTaGGATTCAGCTGGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQASAGC*DSAGFC
Trigger: ACAAAACCCAGCTGAATCCCAGCAGCCTGCAGAAGC...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGCTAATTTTGAGCTGTTaGGAGGAATGGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: LAPSPPVEVKATRERKSKLILSC*EEWKIS
Trigger: GGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAG...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CCA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTCCAGCTTATTCATTTTaGCCCCAAAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRIPAYSF*PQRCCV
Trigger: CACACAGCACCTTTGGGGCCAAAATGAATAAGCTGG...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACAAAGTCAGCAATCTTaGTGTTGGCCTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTQSQQS*CWPRHP
Trigger: TGGATGCCGAGGCCAACATCAAGATTGCTGACTTTG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAGCTCTCACAGTCTGTTaGCATGTAGAAAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQALTVC*HVERDP
Trigger: CGGGTCCCTTTCTACATGTCAACAGACTGTGAGAGC...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCAGGTGAGGGCAGGGATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HCLDSHASSLTHLQVRAGIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...CCCTGCCCTCACCTGCAAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR TCA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAAATTACCCAGTTCTCTaGAGATATACCACATACTCC +
Preference number: 4 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQNYPVL*RYTTYS
Trigger: GGAGTATGTGGTATATCTTCAGAGAACTGGGTAATT...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp GGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCTGGATCACATGCCATTTGTTaGGGACCTGTCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GTFAGKLTMRVFLLQKAGSHAIC*GPVLSL
Trigger: AAGAGAGAGGACAGGTCCTCAACAAATGGCATGTGA...TCCAGCTTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCCCCGACCTCTTTCCTaGTCTTCTGACCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLPRPLS*SSDLST
Trigger: AGTTGACAGGTCAGAAGATCAGGAAAGAGGTCGGGG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTAACTCCGCTGCCCTTTaGTGTGGCTGGTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSNSAAL*CGWCLC
Trigger: GCAAAGGCACCAGCCACAGCAAAGGGCAGCGGAGTT...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATTGTTGGGGGTGCTCGTaGTGTCCTTCCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: QRRWIISPNTAFLLLILHCWGCS*CPSAAL
Trigger: CAGAGCGGCGGAAGGACAGCACGAGCACCCCCAACA...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTTCCTCAAGAGACCTTTaGAGAGGGGAGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSSSRDL*RGEGVG
Trigger: CCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGA...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACGAAAGGAAAAACCACTaGCTGGATTCCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANERKNH*LDSHAS
Trigger: AGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTC...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAATCCGCCCTTCTGTACTaGACAGACTTCAACCACTAT +
Preference number: 4 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKSALLY*TDFNHY
Trigger: ATAGTGGTTGAAGTCTGTGCAGTACAGAAGGGCGGA...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTAGTACAGCGTTTAGCTaGGTTCAGCACCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSSTAFS*VQHQKS
Trigger: AGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACT...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCGAGAGTACAGCGTTTAGCTGGGTTCAGCACCAAAAATCTCCGCAGGATGCTACTTCGTTGTACTTCTaGCTGGTCAAGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LESTAFSWVQHQKSPQDATSLYF*LVKDSL
Trigger: CAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGT...AGCATCCTGCGGAGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACTCTCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CCA 90 bp CACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCACTAATTTTGAGCTGTTaGGAGGAATGGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: HPAHSTNPPISTLPTTLPLILSC*EEWKIS
Trigger: GGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAG...TGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANAEGRV*GIYKDL
Trigger: CAAATCCTTGTAAATACCCCACACCCTCCCCTCTGC...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTGCCCACTTTCTCTTCTaGGCTCCCCAAGACAATGGT +
Preference number: 4 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFAHFLF*APQDNG
Trigger: ACCATTGTCTTGGGGAGCCCAGAAGAGAAAGTGGGC...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAAATGAGAGTCTGCCCTaGGACTTTTGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKNESLP*DFCWET
Trigger: AGTTTCCCAGCAAAAGTCCCAGGGCAGACTCTCATT...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACTCTCTCTTGCTCCCTaGCCCTTGTATGTGCCATTT +
Preference number: 4 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTLSLAP*PLYVPF
Trigger: AAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAACAGCATTTCTCTTGCTaGTTCTCCATCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQQHFSC*FSIHAQ
Trigger: TTGGGCATGGATGGAGAATCAGCAAGAGAAATGCTG...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp GGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAGCTGGAAAAATCTCCGCAGGATaGTCTCACAGTCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: GTFAGKLTMRVFLLQKAGKISAG*SHSLLT
Trigger: TGTCAACAGACTGTGAGAGCATCCTGCGGAGATTTT...TCCAGCTTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCTTTGCTGTGGCTGGTaGCTTTGCTGGAACTTGTTC +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLLCCGW*LCWNLF
Trigger: GAACAAGTTCCAGCAAAGGCACCAGCCACAGCAAAG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR GCA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAGAAAGGAAAAACCACTaGCTGGATTCCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQERKNH*LDSHAS
Trigger: AGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTC...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTCTCGGGCTCTGTGTATaGCTTCAACTCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSLGLCV*LQLLTL
Trigger: GAGGGTGAGGAGTTGAAGCCATACACAGAGCCCGAG...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCGCAGAGGGGAGGGTGTaGGGTATTTACAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLAEGRV*GIYKDL
Trigger: CAAATCCTTGTAAATACCCCACACCCTCCCCTCTGC...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTCCCTGGGACTTTTGCTaGGAAACTGACAATGAGGGT +
Preference number: 4 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSPWDFC*ETDNEG
Trigger: ACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGG...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATGCCCATTTGGGCCAATaGGAGTCTGCCCTGGGACTT +
Preference number: 4 (lower is better)
Translates to: QRRWIISPNTAFLLLILHAHLGQ*ESALGL
Trigger: AAGTCCCAGGGCAGACTCTCATTGGCCCAAATGGGC...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTTCACATGCCATTTGTTaGGGACCTGTCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSSHAIC*GPVLSL
Trigger: AAGAGAGAGGACAGGTCCTCAACAAATGGCATGTGA...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAAGTACAGCGTTTAGCTaGGTTCAGCACCAAAAATCT +
Preference number: 4 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKSTAFS*VQHQKS
Trigger: AGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACT...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp TTCTCTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACACTTCGTTGTACTTCTaGCTGGTCAAGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: FSEDIPHTPTSGLLPRANTSLYF*LVKDSL
Trigger: CAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGT...GTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTACTTCGTTGTACTTCTaGCTGGTCAAGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCTSLYF*LVKDSL
Trigger: CAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGT...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTATCACATGGCCCATTTaGGCCAATGAGAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSITWPI*ANESLP
Trigger: GGGCAGACTCTCATTGGCCCAAATGGGCCATGTGAT...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTCAAAGTCAGCAATCTTaGTGTTGGCCTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSQSQQS*CWPRHP
Trigger: TGGATGCCGAGGCCAACATCAAGATTGCTGACTTTG...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTTCTTTCCTGATCTTCTaGCCTGTCAACTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSSFLIF*PVNFPP
Trigger: GGGAGGGAAGTTGACAGGTCAGAAGATCAGGAAAGA...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAACTTCGTTGTACTTCTaGCTGGTCAAGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: HFVVLLAGQGLFDFFPCVTSLYF*LVKDSL
Trigger: CAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGT...TACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CCA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATTTCCCTGAACTTCCATaGTTCCCCAGTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: QRRWIISPNTAFLLLILHFPELP*FPSAMG
Trigger: CCCCATGGCACTGGGGAACCATGGAAGTTCAGGGAA...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR GCA 90 bp ACAGCAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTAAAATCTCCGCAGGATaGTCTCACAGTCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TAILHLQSHMPFVEDLSSKISAG*SHSLLT
Trigger: TGTCAACAGACTGTGAGAGCATCCTGCGGAGATTTT...AGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATCAATCTGTCGGAACTTaGCTCGAGCTTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRRWIISPNTAFLLLILHQSVGT*LELPSP
Trigger: AGGAGAAGGAAGCTCGAGCCAAGTTCCGACAGATTG...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CCA 90 bp GGAGAAAGTCCAGCTTATTCATTTTGGCCCCAAAGGTGCTGTGTGAATAAGCTCCTAATTTTGAGCTGTTaGGAGGAATGGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: GESPAYSFWPQRCCVNKLLILSC*EEWKIS
Trigger: GGAAATCTTCCATTCCTCCCAACAGCTCAAAATTAG...GAGCTTATTCACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGACTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp TTTCATGATTTGCTCGAGAGTACAGCGTTTAGCTGGGTTCAGCACCAAAAATCTTCCATTTGTCTTTCATaGTTTGCTCGAGAGTACAGC +
Preference number: 4 (lower is better)
Translates to: FHDLLESTAFSWVQHQKSSICLS*FAREYS
Trigger: GCTGTACTCTCGAGCAAATCATGAAAGACAAATGGA...AGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACTCTCGAGCAAATCATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR GCA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTACTTACAAAGTCACATaGCATTTGTTGAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSTYKVT*HLLRTC
Trigger: ACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGT...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR TCA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATATAATTCAGGGAAACTaGGGTGATGATAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QRRWIISPNTAFLLLILHIIQGN*GDDKGR
Trigger: TCTCCCTTTATCATCACCTCAGTTTCCCTGAATTAT...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCCTCCTTCCTCGTCGGGCTGCGTTaGGGGTGCAGGGGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PLPAVLQLAFRPGSRSSFLVGLR*GCRGAG
Trigger: CCCTGCACCCCTGCACCCCAAACGCAGCCCGACGAG...GAAGGAGGAGCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS GCA 90 bp CACCCCCTGCCCGCCGGTCCCGGACCTGGCCACCATGGAAGGTGCTaGGGATGGTGGAACCACGTGCCAGGCGGCTCCGCTCCCCTGATG +
Preference number: 5 (lower is better)
Translates to: HPLPAGPGPGHHGRC*GWWNHVPGGSAPLM
Trigger: CATCAGGGGAGCGGAGCCGCCTGGCACGTGGTTCCACCATCCGCAGCACCTTCCATGGTGGCCAGGTCCGGGACCGGCGGGCAGGGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS CCA 90 bp CTGCCCGCCGGTCCCGGACCTGGCCACCATGGAAGGTGCTGCGGATaGTGGAACCACGTGCCAGGCGGCTCCGCTCCCCTGATGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LPAGPGPGHHGRCCG*WNHVPGGSAPLMGV
Trigger: CACCCCCATCAGGGGAGCGGAGCCGCCTGGCACGTGGTTCCACCATCCGCAGCACCTTCCATGGTGGCCAGGTCCGGGACCGGCGGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGTCCGAGTTCCGATCGTaGCCCGGGGCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: MRVTRVRKARAVPATRRKSEFRS*PGASTV
Trigger: GACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGA...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp GAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: EMRVTRVRKARAVPATRRSSGAL*VGRGRT
Trigger: TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGA...CCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp CCTCGACTCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCTCTGGGATCTCTGCCTaGTTGGGGTTGTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PRLPLPAVLQLAFRPGSRSGISA*LGLWAL
Trigger: CAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA...GCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGAGTCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CAA 90 bp GAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGGTCTGCGACCTGATCTaGGATCCCTGGGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: EMRVTRVRKARAVPATRRVCDLI*DPWGRE
Trigger: CTCTCTGCCCCAGGGATCCAAGATCAGGTCGCAGAC...CCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS TCA 90 bp CTCCTCGGGACAGGAGGCGATGGAGTTCCGGCAACGGGCACCCAGTaGGCGGCTGGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACT +
Preference number: 5 (lower is better)
Translates to: LLGTGGDGVPATGTQ*AAGPGRAFVRGAAT
Trigger: AGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAACTCCATCGCCTCCTGTCCCGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000587566.5
ENST00000590909.1
CDS CCA 90 bp GACAGGAGGCGATGGAGTTCCGGCAACGGGCACCCAGTGAGCGGCTaGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: DRRRWSSGNGHPVSG*TRTGLCPRSGHCPR
Trigger: CCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAACTCCATCGCCTCCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000587566.5
ENST00000590909.1
CDS-3UTR CAA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGTCCGAGTTCCGATCGTaGCCCGGGGCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVSEFRS*PGASTV
Trigger: GACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGA...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp CTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCCTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LELVPLVVSLGARTRARALELVP*VVSLGA
Trigger: GGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG...GGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592207.5
ENST00000592762.5
CDS-3UTR CAA 90 bp CCTCGACTCCCACTCCCCGCGGTGCTGCAGCTCGCCTTCCGGCCTGGCAGCCGCCTGTGGCTGGTGCCTTaGCTGGAACTTGTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: PRLPLPAVLQLAFRPGSRLWLVP*LELVPL
Trigger: CAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAG...GCGGCTGCCAGGCCGGAAGGCGAGCTGCAGCACCGCGGGGAGTGGGAGTCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS GCA 90 bp GTGAGCGGCTGGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACTaGCCAAGGTGCCATGCTGGGCGGGGGAGATGGAGCATGAGCTAT +
Preference number: 5 (lower is better)
Translates to: VSGWTRTGLCPRSGH*PRCHAGRGRWSMSY
Trigger: ATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS CCA 90 bp CCGAGGAGCGGCCACTGCCCAAGGTGCCATGCTGGGCGGGGGAGATaGAGCATGAGCTATCCAATCCCACCTTCCGTGGAACCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: PRSGHCPRCHAGRGR*SMSYPIPPSVEPVG
Trigger: GCCCACGGGTTCCACGGAAGGTGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS CCA 90 bp GCCCTGGTCACTCACGGGGGTGCTCGTGCTGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGG +
Preference number: 5 (lower is better)
Translates to: ALVTHGGARAVLPPL*DLCLVGVVGAADHG
Trigger: CCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCACGAGCACCCCCGTGAGTGACCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588621.5
CDS-3UTR CAA 90 bp GCCCGCCACACGGCGGAAGAGAACTCCCCGCAAGCCTGGCCGGGGCAGCTGGCAGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: ARHTAEENSPQAWPGQLAVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...TGCCAGCTGCCCCGGCCAGGCTTGCGGGGAGTTCTCTTCCGCCGTGTGGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp CCCTGGCTGAGGCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTAGCTTGGTGAAGAGGTaGGTGGTGGGGCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PWLRQASPLDSPIPALPSSLVKR*VVGRGR
Trigger: GCGGCCCCGCCCCACCACCAACCTCTTCACCAAGCT...ACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGCCTCAGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GAGATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAGTTTGGAGGTCAGCTaGGTGAAGAGGTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EMRVTRVRKARAVPATRRSLEVS*VKRLVV
Trigger: CACCACCAACCTCTTCACCAAGCTGACCTCCAAACT...CCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp ATGCGGGTGACGAGGGTGCGGAAGGCCAGGGCGGTGCCCGCCACACGGCGGAAGACCCTTCGGGTCAGTTaGGAGGTCAGCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: MRVTRVRKARAVPATRRKTLRVS*EVSLVK
Trigger: CTTCACCAAGCTGACCTCCAAACTGACCCGAAGGGT...CTTCCGCCGTGTGGCGGGCACCGCCCTGGCCTTCCGCACCCTCGTCACCCGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp AACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGACCATCTCGTCGGGCTGCGTTaGGGGTGCAGGGGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: NWGLGDEAEFHPAFFHDHLVGLR*GCRGAG
Trigger: CCCTGCACCCCTGCACCCCAAACGCAGCCCGACGAG...ATGGTCGTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLSSGAL*VGRGRT
Trigger: TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGA...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS TCA 90 bp GCGGCCACTGCCCAAGGTGCCATGCTGGGCGGGGGAGATGGAGCATaGGCTATCCAATCCCACCTTCCGTGGAACCCGTGGGCTAGTGCA +
Preference number: 5 (lower is better)
Translates to: AATAQGAMLGGGDGA*AIQSHLPWNPWASA
Trigger: TGCACTAGCCCACGGGTTCCACGGAAGGTGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS GCA 90 bp CAGGACGGGCCTTTGTCCGAGGAGCGGCCACTGCCCAAGGTGCCATaGTGGGCGGGGGAGATGGAGCATGAGCTATCCAATCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: QDGPLSEERPLPKVP*WAGEMEHELSNPTF
Trigger: GAAGGTGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS GCA 90 bp TGGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACTGCCCAAGGTaGCATGCTGGGCGGGGGAGATGGAGCATGAGCTATCCAATCCCA +
Preference number: 5 (lower is better)
Translates to: WTRTGLCPRSGHCPR*HAGRGRWSMSYPIP
Trigger: TGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS CCA 90 bp AGGAGGGAGGTTGTTGGGGGTGCTCGTGCTGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCTGACCATGGG +
Preference number: 5 (lower is better)
Translates to: RREVVGGARAVLPPL*DLCLVGVVGAADHG
Trigger: CCCATGGTCAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCACGAGCACCCCCAACAACCTCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS CCA 90 bp GACGGGCCTTTGTCCGAGGAGCGGCCACTGCCCAAGGTGCCATGCTaGGCGGGGGAGATGGAGCATGAGCTATCCAATCCCACCTTCCGT +
Preference number: 5 (lower is better)
Translates to: DGPLSEERPLPKVPC*AGEMEHELSNPTFR
Trigger: ACGGAAGGTGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS-3UTR CAA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACACGCAGCTCCTTGAGGTaGTGCCCGTCGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTRSSLR*CPSKGR
Trigger: CCTGCCCTTCGACGGGCACAACCTCAAGGAGCTGCG...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGCGCTCCCGCAGCTCCTaGAGGTTGTGCCCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWRSRSS*RLCPSK
Trigger: CTTCGACGGGCACAACCTCAAGGAGCTGCGGGAGCG...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: LELVPLVVSLGARTRARAVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...GGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592207.5
ENST00000592762.5
CDS-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCTGGGATCTCTGCCTaGTTGGGGTTGTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGSGISA*LGLWAL
Trigger: CAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GCAGGCATCACCTCTGGACTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGCAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: AGITSGLPYTSPAQSLPEQSSRS*EMRVTR
Trigger: CCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTG...CTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAGTCCAGAGGTGATGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCGTCTGCGACCTGATCTaGGATCCCTGGGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGVCDLI*DPWGRE
Trigger: CTCTCTGCCCCAGGGATCCAAGATCAGGTCGCAGAC...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
CDS-3UTR CAA 90 bp GGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCACCCGTGCCAGGGCCAGCCAAAGTCAGCAATCTaGATGTTGGCCTCGGCATCC +
Preference number: 5 (lower is better)
Translates to: GTCSVGGVAGRPHPCQGQPKSAI*MLASAS
Trigger: GGATGCCGAGGCCAACATCAAGATTGCTGACTTTGG...CTGGCCCTGGCACGGGTGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCGACCTGTCCTCTCTCTaGCTCCCTGGCCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGDLSSL*LPGPCM
Trigger: CATACAAGGGCCAGGGAGCAAGAGAGAGGACAGGTC...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTAGCTTGGTGAAGAGGTaGGTGGTGGGGCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PSPPVEVKATRERKSKGPSLVKR*VVGRGR
Trigger: GCGGCCCCGCCCCACCACCAACCTCTTCACCAAGCT...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCACCCTTCGGGTCAGTTaGGAGGTCAGCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGTLRVS*EVSLVK
Trigger: CTTCACCAAGCTGACCTCCAAACTGACCCGAAGGGT...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACACGCAGCTCCTTGAGGTaGTGCCCGTCGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTRSSLR*CPSKGR
Trigger: CCTGCCCTTCGACGGGCACAACCTCAAGGAGCTGCG...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGCTTGGTGAAGAGGTaGGTGGTGGGGCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHSLVKR*VVGRGR
Trigger: GCGGCCCCGCCCCACCACCAACCTCTTCACCAAGCT...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACCGGGCAGGGTGGAACTaGTTCCGTTGGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHRAGWN*FRWWCR
Trigger: GCGACACCACCAACGGAACAAGTTCCACCCTGCCCG...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACATGCCTTTGCTGGAACTaGTTCCGTTGGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTCLCWN*FRWWCR
Trigger: GCGACACCACCAACGGAACAAGTTCCAGCAAAGGCA...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACACTGTGGCTGGTGCCTTaGCTGGAACTTGTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTLWLVP*LELVPL
Trigger: CAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAG...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTCAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: PSPPVEVKATRERKSKGPQSSRS*EMRVTR
Trigger: CCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTG...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CTCCCCTATACCAGCCCTGCCCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: LPYTSPAQSLPEDTSASSAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...GGAGGAGGCAGATGTGTCCTCAGGCAGCGACTGGGCAGGGCTGGTATAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CACAAACCCGCCCATCTCTACCCTACCTACAACCTTGCCATGGCTCCCCCAGTGCTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: HKPAHLYPTYNLAMAPPVLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...CACTGGGGGAGCCATGGCAAGGTTGTAGGTAGGGTAGAGATGGGCGGGTTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS GCA 90 bp GATCCCTGGGGCAGAGAGGCGCCCGAAACACAGCGGTTAGAGTTCTaGCGTTTAGAGGGATCGAGGGTAACCCTTCGGGTCAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: DPWGREAPETQRLEF*RLEGSRVTLRVSLE
Trigger: CTCCAAACTGACCCGAAGGGTTACCCTCGATCCCTCTAAACGGCAGAACTCTAACCGCTGTGTTTCGGGCGCCTCTCTGCCCCAGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS GCA 90 bp GATCCCTGGGGCAGAGAGGCGCCCGAAACACAGCGGTTAGAGTTCTaGCGTTTAGAGGGATCGAGGGTAACCCTGCGGGTCATCATGCTA +
Preference number: 5 (lower is better)
Translates to: DPWGREAPETQRLEF*RLEGSRVTLRVIML
Trigger: TAGCATGATGACCCGCAGGGTTACCCTCGATCCCTCTAAACGGCAGAACTCTAACCGCTGTGTTTCGGGCGCCTCTCTGCCCCAGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622871.1
CDS-3UTR CAA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAAGTTTGGAGGTCAGCTaGGTGAAGAGGTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTSLEVS*VKRLVV
Trigger: CACCACCAACCTCTTCACCAAGCTGACCTCCAAACT...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 5 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTCTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LLSLPAQQEVGGGHFVVLLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...AAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCCAGCTTATTCATTTaGGCCCCAAAGGTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGSSLFI*APKVLC
Trigger: ACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGA...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AAGGGCCCTGGGACCGTGGTGGCTCAGAGCTCGAGGTCGTTGGAGATGCGGGTGAAAGTCACATGCCATTaGTTGAGGACCTGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KGPGTVVAQSSRSLEMRVKVTCH*LRTCPL
Trigger: GAGAGGACAGGTCCTCAACAAATGGCATGTGACTTT...CACCCGCATCTCCAACGACCTCGAGCTCTGAGCCACCACGGTCCCAGGGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTCATCACCTCTTGAGGTaGTGCCCGTCGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLSLPAQQEVGGGHFVVLHHLLR*CPSKGR
Trigger: CCTGCCCTTCGACGGGCACAACCTCAAGAGGTGATG...AAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CAA 90 bp CCTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: PPQSSCPAGGRWRSLRCTVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CAA 90 bp ACCTCAGGTCCCCCGATTCTCTCAGGTTCGTCTGCGACCCTTCGGGTCAGTTTGGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: TSGPPILSGSSATLRVSLVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...CAAACTGACCCGAAGGGTCGCAGACGAACCTGAGAGAATCGGGGGACCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCCTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSLELVP*VVSLGA
Trigger: GGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTGCCTTTGCTGGAACTaGTTCCGTTGGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: PPQSSCPAGGRWRSLRCTCLCWN*FRWWCR
Trigger: GCGACACCACCAACGGAACAAGTTCCAGCAAAGGCA...AGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CAA 90 bp CAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGGGTATTTACAAGGATTaGTACAAAGTGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: QSLLRCPLGRAREDRTGWGIYKD*YKVPRA
Trigger: GGCGCGGGGCACTTTGTACAAATCCTTGTAAATACC...CCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp TGCCCTGTCCCCAAAGTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGTATTTACAAGGATTaGTACAAAGTGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: CPVPKVSSGALLVGRGRTGIYKD*YKVPRA
Trigger: GGCGCGGGGCACTTTGTACAAATCCTTGTAAATACC...TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGACTTTGGGGACAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp GTCTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCACTCTCTTAAATTTATaGGGCAACAGGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VSSGALLVGRGRTGLAGGTLLNL*GNRLQV
Trigger: CACCTGCAGCCTGTTGCCCAATAAATTTAAGAGAGT...GCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CTCCTCAGGTGCCCTCTTGGTAGGGCGAGGGAGGACAGGACTGGCTGGAGGCTCACTCTCTTAAATTTATaGGGCAACAGGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLRCPLGRAREDRTGWRLTLLNL*GNRLQV
Trigger: CACCTGCAGCCTGTTGCCCAATAAATTTAAGAGAGT...GAGCCTCCAGCCAGTCCTGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CTCCTCAGTCTTCCTGCCCAGCAGGAGGTAGGTGGCGGTCACTTCGTTGTACTTACCCACCATCACCTCTaGAGGTTGTGCCCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LLSLPAQQEVGGGHFVVLTHHHL*RLCPSK
Trigger: CTTCGACGGGCACAACCTCAAGAGGTGATGGTGGGT...AAGTACAACGAAGTGACCGCCACCTACCTCCTGCTGGGCAGGAAGACTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CAA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAAGACCAGGACGGGCCTTaGTCCGAGGAGCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQDQDGP*SEERPL
Trigger: CAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTC...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGCGAGCCAGCTTGACTTaGGCAAAGTTGCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LAPSPPVEVKATRERKSKRASLT*AKLPFP
Trigger: TGGGAAGGGCAACTTTGCCAAAGTCAAGCTGGCTCG...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTACACTTCTCCAGCACTaGCGTACTCCATCACCAGGT +
Preference number: 5 (lower is better)
Translates to: VTAAAPQETFAEGRVWGITLLQH*RTPSPG
Trigger: ACCTGGTGATGGAGTACGCAAGTGCTGGAGAAGTGT...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCCCAAAGTCAGCAATCTaGATGTTGGCCTCGGCATCC +
Preference number: 5 (lower is better)
Translates to: PPVEVKATRERKSKGPGTPKSAI*MLASAS
Trigger: GGATGCCGAGGCCAACATCAAGATTGCTGACTTTGG...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGGTGGCGGTCACTTCGTaGTACTTCTGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWVAVTS*YFWLVK
Trigger: CTTGACCAGCCAGAAGTACAACGAAGTGACCGCCAC...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLLELVP*VVSLGA
Trigger: GGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GGCGGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGCTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GGHFVVLLAGQGLFDFFPLELVP*VVSLGA
Trigger: GGCGCCCAGCGACACCACCAACGGAACAAGTTCCAG...CGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592207.5
ENST00000592762.5
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTGGGATCTCTGCCTTGTaGGGGTTGTGGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTGISAL*GLWALL
Trigger: CAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCC...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGGGGATCTCTGCCTTGTaGGGGTTGTGGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLGISAL*GLWALL
Trigger: CAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCC...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCCGCGCCAGCCTGGACCCTTCGGGTCAGTTaGGAGGTCAGCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GGCGVFTRICTKCPAPAWTLRVS*EVSLVK
Trigger: CTTCACCAAGCTGACCTCCAAACTGACCCGAAGGGT...CCAGGCTGGCGCGGGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 5 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTCTTGCTCCCTGGCCCTaGTATGTGCCATTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PSPPVEVKATRERKSKGPLAPWP*YVPFAV
Trigger: CACAGCAAATGGCACATACAAGGGCCAGGGAGCAAG...AGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAATCCGAGTTCCGATCGTaGCCCGGGGCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQSEFRS*PGASTV
Trigger: GACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGA...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp CACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTATCCGAGTTCCGATCGTaGCCCGGGGCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: HFVVLLAGQGLFDFFPCVSEFRS*PGASTV
Trigger: GACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGA...TACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CAA 90 bp TCCCCAGTTGAAGATCCCAGCTCCACACCCAGAGGCTACATAGACCACACACGCACAATCTGTCGGAACTaGGCTCGAGCTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SPVEDPSSTPRGYIDHTRTICRN*ARASFS
Trigger: GGAGAAGGAAGCTCGAGCCAAGTTCCGACAGATTGT...GCGTGTGTGGTCTATGTAGCCTCTGGGTGTGGAGCTGGGATCTTCAACTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAACGCTCCCGCAGCTCCTaGAGGTTGTGCCCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQRSRSS*RLCPSK
Trigger: CTTCGACGGGCACAACCTCAAGGAGCTGCGGGAGCG...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCGGGATCTCTGCCTTGTaGGGGTTGTGGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTGISAL*GLWALL
Trigger: CAGCAGCGCCCACAACCCCAACAAGGCAGAGATCCC...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CAA 90 bp TATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTTCCACGGTATTTACAAGGATTaGTACAAAGTGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: YRNWGLGDEAEFHPAFFHGIYKD*YKVPRA
Trigger: GGCGCGGGGCACTTTGTACAAATCCTTGTAAATACC...GTGGAAGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCGACCTGTCCTCTCTCTaGCTCCCTGGCCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRDLSSL*LPGPCM
Trigger: CATACAAGGGCCAGGGAGCAAGAGAGAGGACAGGTC...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAACAGGTCCTGCCCACTTaGCCTCACAGGACTCTCTTA +
Preference number: 5 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQQVLPT*PHRTLL
Trigger: TAAGAGAGTCCTGTGAGGCAAAGTGGGCAGGACCTG...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAACTGTACTGTCCCCAGTaGAAGATCCCAGCTCCACAC +
Preference number: 5 (lower is better)
Translates to: SGSSSRDLCRGEGVGYLQLYCPQ*KIPAPH
Trigger: GTGTGGAGCTGGGATCTTCAACTGGGGACAGTACAG...TTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GGCGGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGCATCACCTCTTGAGGTaGTGCCCGTCGAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GGHFVVLLAGQGLFDFFPHHLLR*CPSKGR
Trigger: CCTGCCCTTCGACGGGCACAACCTCAAGAGGTGATG...CGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS CCA 90 bp ATGCGGACTTCTCGGAACAGCTTCTGCAGGCTGCTGGGATTCAGCTaGGTTTTGTCGATAATCTTGATGGCAACCTCCCGACCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: MRTSRNSFCRLLGFS*VLSIILMATSRPVR
Trigger: CCTCACTGGTCGGGAGGTTGCCATCAAGATTATCGACAAAACCCAGCTGAATCCCAGCAGCCTGCAGAAGCTGTTCCGAGAAGTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000587566.5
ENST00000590909.1
CDS-3UTR CAA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTATGTGCCGAGCCAGCTaGACTTTGGCAAAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: PVSVSESLSPTDRASCLCMCRAS*TLAKLP
Trigger: GGGCAACTTTGCCAAAGTCAAGCTGGCTCGGCACAT...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTGGATTCAGCTGGGTTTaGTCGATAATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: PDIGTGASGMRPSSILPSGFSWV*SIILMA
Trigger: TGCCATCAAGATTATCGACAAAACCCAGCTGAATCC...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAAAAGAGCTTCACGATGTaGGGGTGGTTTAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LPSTLHIAQTRPSLPYLQKSFTM*GWFRPF
Trigger: GAAGGGCCTAAACCACCCCAACATCGTGAAGCTCTT...TTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TTCAGGGAAACTGAGGTGATGATAAAGGGAGAATCCCCTCCCTGGCCCCTTCCCACAATCTGTCGGAACTaGGCTCGAGCTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FRETEVMIKGESPPWPLPTICRN*ARASFS
Trigger: GGAGAAGGAAGCTCGAGCCAAGTTCCGACAGATTGT...GGGAAGGGGCCAGGGAGGGGATTCTCCCTTTATCATCACCTCAGTTTCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GGCTGGTGCCTTTGCTGGAACTTGTTCCGTTGGTGGTGTCGCTGGGCGCCCGCATTTGTCTTTCATGATTaGCTCGAGAGTACAGCGTTT +
Preference number: 5 (lower is better)
Translates to: GWCLCWNLFRWWCRWAPAFVFHD*LESTAF
Trigger: AAACGCTGTACTCTCGAGCAAATCATGAAAGACAAA...TGCGGGCGCCCAGCGACACCACCAACGGAACAAGTTCCAGCAAAGGCACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CAA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCTCTGGGATCTCTGCCTaGTTGGGGTTGTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPSGISA*LGLWAL
Trigger: CAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGA...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTGAAGATATACCACATACTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAACTAGGAGGGAGGTTGTaGGGGGTGCTCGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LKIYHILPLLGFCPGQTQLGGRL*GVLVLS
Trigger: GGACAGCACGAGCACCCCCAACAACCTCCCTCCTAG...TTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAGTATGTGGTATATCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCCGATATAGGAACTGGGGCCTCGGGGATGAGGCCGAGTTCCATCCTGCCTTCTCAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 5 (lower is better)
Translates to: PDIGTGASGMRPSSILPSQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...AGAAGGCAGGATGGAACTCGGCCTCATCCCCGAGGCCCCAGTTCCTATATCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 5 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGGCAGGAAGTGGGGGTTaGAGCGTGAGGGGACGGGAG +
Preference number: 5 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLAGSGG*SVRGRE
Trigger: CTCCCGTCCCCTCACGCTCAAACCCCCACTTCCTGC...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAGGTATTTACAAGGATTaGTACAAAGTGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: QRQLLKRPLQRGGCGVFTGIYKD*YKVPRA
Trigger: GGCGCGGGGCACTTTGTACAAATCCTTGTAAATACC...TGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTCTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTCATGTCTCTGTCTGTACTGTCCCCAGTaGAAGATCCCAGCTCCACAC +
Preference number: 5 (lower is better)
Translates to: PVSVSESLSPTDRASCLCLYCPQ*KIPAPH
Trigger: GTGTGGAGCTGGGATCTTCAACTGGGGACAGTACAG...ACAGAGACATGAAGCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GGTCACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTGGAACTTGTTCCGTaGGTGGTGTCGCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GHFVVLLAGQGLFDFFPCVELVP*VVSLGA
Trigger: GGCGCCCAGCGACACCACCAACGGAACAAGTTCCAC...ACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGTTTTGTCGATAATCTaGATGGCAACCTCCCGACCA +
Preference number: 5 (lower is better)
Translates to: LAPSPPVEVKATRERKSKVLSII*MATSRP
Trigger: TGGTCGGGAGGTTGCCATCAAGATTATCGACAAAAC...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTCAGCAATCTTGATGTaGGCCTCGGCATCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSSAILM*ASASSK
Trigger: CTTGCTGGATGCCGAGGCCAACATCAAGATTGCTGA...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGTTTGGAGGTCAGCTaGGTGAAGAGGTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PKTMVCPVSVSESLSPTDSLEVS*VKRLVV
Trigger: CACCACCAACCTCTTCACCAAGCTGACCTCCAAACT...GTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAACAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQQSSRS*EMRVTR
Trigger: CCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTG...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTCAGAGCTCGAGGTCGTaGGAGATGCGGGTGACGAGG +
Preference number: 5 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSQSSRS*EMRVTR
Trigger: CCTCGTCACCCGCATCTCCAACGACCTCGAGCTCTG...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp GTGACAGCGGCAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTCAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 5 (lower is better)
Translates to: VTAAAPQETFAEGRVWGIQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...AATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTGCCGCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFSSGAL*VGRGRT
Trigger: TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGA...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp AGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTTCCTCAGGTGCCCTCTaGGTAGGGCGAGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: RDLCRGEGVGYLQGFVQSSSGAL*VGRGRT
Trigger: TGTCCTCCCTCGCCCTACCAAGAGGGCACCTGAGGA...ACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp TCCTCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: SSLLLPGPCMCHLLCLKRAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...GCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACACTCCTCAAGAGACCTTaGCAGAGGGGAGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LKRPLQRGGCGVFTRICTLLKRP*QRGGCG
Trigger: CCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAG...TGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp CTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAATGCCTAACTAACTCCTACCAGGTCCTGCCCACTTaGCCTCACAGGACTCTCTTA +
Preference number: 5 (lower is better)
Translates to: LPLLGFCPGQTQCLTNSYQVLPT*PHRTLL
Trigger: TAAGAGAGTCCTGTGAGGCAAAGTGGGCAGGACCTG...GTAGGAGTTAGTTAGGCATTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTACCCACCATCACCTCTaGAGGTTGTGCCCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFTHHHL*RLCPSK
Trigger: CTTCGACGGGCACAACCTCAAGAGGTGATGGTGGGT...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAACGAGCCAGCTTGACTTaGGCAAAGTTGCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKRASLT*AKLPFP
Trigger: TGGGAAGGGCAACTTTGCCAAAGTCAAGCTGGCTCG...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAAATGTGCCGAGCCAGCTaGACTTTGGCAAAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKMCRAS*TLAKLP
Trigger: GGGCAACTTTGCCAAAGTCAAGCTGGCTCGGCACAT...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTTCAGCAATCTTGATGTaGGCCTCGGCATCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTSAILM*ASASSK
Trigger: CTTGCTGGATGCCGAGGCCAACATCAAGATTGCTGA...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCCACTTCTGGGCTTTTGCCCAGGGCAAACTCAATGCCTAACTAACTCCTACCCAAAGTCAGCAATCTaGATGTTGGCCTCGGCATCC +
Preference number: 5 (lower is better)
Translates to: LPLLGFCPGQTQCLTNSYPKSAI*MLASAS
Trigger: GGATGCCGAGGCCAACATCAAGATTGCTGACTTTGG...GTAGGAGTTAGTTAGGCATTGAGTTTGCCCTGGGCAAAAGCCCAGAAGTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTATCACCTCAATTCTCTaGGTGTCCCCGAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QLLKRPLQRGGCGVFTRIITSIL*VSPKSS
Trigger: GGAGGACTTCGGGGACACCAAGAGAATTGAGGTGAT...AATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCTGCCTTTGCTGGAACTaGTTCCGTTGGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSACLCWN*FRWWCR
Trigger: GCGACACCACCAACGGAACAAGTTCCAGCAAAGGCA...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGATGTTTTCTTTCCCATTaGGCAACAGTGACGGGCGCT +
Preference number: 5 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRCFLSH*ATVTGA
Trigger: AGCGCCCGTCACTGTTGCCAAATGGGAAAGAAAACA...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGGGCCCTGGGACCCCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: PPVEVKATRERKSKGPGTPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...GGTCCCAGGGCCCTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCGTTTTGTCGATAATCTaGATGGCAACCTCCCGACCA +
Preference number: 5 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSVLSII*MATSRP
Trigger: TGGTCGGGAGGTTGCCATCAAGATTATCGACAAAAC...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCCTTCCACCCTGCACATAGCACAAACCCGCCCATCTCTACCCTACCTACAAGGATTCAGCTGGGTTTaGTCGATAATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: LPSTLHIAQTRPSLPYLQGFSWV*SIILMA
Trigger: TGCCATCAAGATTATCGACAAAACCCAGCTGAATCC...TTGTAGGTAGGGTAGAGATGGGCGGGTTTGTGCTATGTGCAGGGTGGAAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTAAGAGCTTCACGATGTaGGGGTGGTTTAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFKSFTM*GWFRPF
Trigger: GAAGGGCCTAAACCACCCCAACATCGTGAAGCTCTT...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCTCAGCAATCTTGATGTaGGCCTCGGCATCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTSAILM*ASASSK
Trigger: CTTGCTGGATGCCGAGGCCAACATCAAGATTGCTGA...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592207.5
ENST00000592762.5
ENST00000620044.4
CDS-3UTR CAA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCTCAGCAATCTTGATGTaGGCCTCGGCATCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSASAILM*ASASSK
Trigger: CTTGCTGGATGCCGAGGCCAACATCAAGATTGCTGA...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
CDS-3UTR CAA 90 bp TCTCTCTTGCTCCCTGGCCCTTGTATGTGCCATTTGCTGTGCCTAAAACGCACTTGTTTTCTTTCCCATTaGGCAACAGTGACGGGCGCT +
Preference number: 5 (lower is better)
Translates to: SLLLPGPCMCHLLCLKRTCFLSH*ATVTGA
Trigger: AGCGCCCGTCACTGTTGCCAAATGGGAAAGAAAACA...AGTGCGTTTTAGGCACAGCAAATGGCACATACAAGGGCCAGGGAGCAAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTGGCCCCTTCCCCTCCTGTAGAAGTGAAGGCGACAAGGGAGAGGAAGAGTAAGCCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: LAPSPPVEVKATRERKSKPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...CTTACTCTTCCTCTCCCTTGTCGCCTTCACTTCTACAGGAGGGGAAGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp ACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCCGCCCAAGGCCTAATTTaGAGCTGTTGGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: TFAEGRVWGIYKDLYKVPAQGLI*SCWEEW
Trigger: CCATTCCTCCCAACAGCTCAAAATTAGGCCTTGGGC...GGGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp GCTCCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACACTCTCTTAAATTTATaGGGCAACAGGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: APQDNGLSGVCVRIPVSHTLLNL*GNRLQV
Trigger: CACCTGCAGCCTGTTGCCCAATAAATTTAAGAGAGT...GTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CATAACCTTCAAGGCCCTACTGACGCCCCTAGCCCCATACCTCACAGCAATTCTAAAGTCACATGCCATTaGTTGAGGACCTGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: HNLQGPTDAPSPIPHSNSKVTCH*LRTCPL
Trigger: GAGAGGACAGGTCCTCAACAAATGGCATGTGACTTT...AGAATTGCTGTGAGGTATGGGGCTAGGGGCGTCAGTAGGGCCTTGAAGGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATATCACCTCAATTCTCTaGGTGTCCCCGAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VVLLAGQGLFDFFPCVAHITSIL*VSPKSS
Trigger: GGAGGACTTCGGGGACACCAAGAGAATTGAGGTGAT...ATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CAA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGCTGTGGCTGGTGCCTTaGCTGGAACTTGTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLLWLVP*LELVPL
Trigger: CAACGGAACAAGTTCCAGCAAAGGCACCAGCCACAG...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp GACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAGTGCCGTCACATGCCATTTGTaGAGGACCTGTCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: DLCRGEGVGYLQGFVQSAVTCHL*RTCPLS
Trigger: AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGAC...GGCACTTTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAGAGAACAGCAGAGGGGACAATCTTTGCCCCCAAATATAATTCAGGGAAACTGACACTTCTCCAGCACTaGCGTACTCCATCACCAGGT +
Preference number: 5 (lower is better)
Translates to: QRTAEGTIFAPKYNSGKLTLLQH*RTPSPG
Trigger: ACCTGGTGATGGAGTACGCAAGTGCTGGAGAAGTGT...CAGTTTCCCTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTGCTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CTCCGAAAGGAAAAACCACTGCCTGGATTCCCACGCCTCTTCTTTAACTCATTTATCACCTCAATTCTCTaGGTGTCCCCGAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRKEKPLPGFPRLFFNSFITSIL*VSPKSS
Trigger: GGAGGACTTCGGGGACACCAAGAGAATTGAGGTGAT...AAATGAGTTAAAGAAGAGGCGTGGGAATCCAGGCAGTGGTTTTTCCTTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATCTAGGAGGGAGGTTGTaGGGGGTGCTCGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QRRWIISPNTAFLLLILHLGGRL*GVLVLS
Trigger: GGACAGCACGAGCACCCCCAACAACCTCCCTCCTAG...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CCCCAAGACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: PQDNGLSGVCVRIPVSHRPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...TCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTTCCAGCTTATTCATTTaGGCCCCAAAGGTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFSSLFI*APKVLC
Trigger: ACACAGCACCTTTGGGGCCAAAATGAATAAGCTGGA...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TGTGTATGGCTTCAACTCCTCACCCTCATAGCCGATGTTGATCCATTTGTCTTTTCAGCAATCTTGATGTaGGCCTCGGCATCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: CVWLQLLTLIADVDPFVFSAILM*ASASSK
Trigger: CTTGCTGGATGCCGAGGCCAACATCAAGATTGCTGA...AAAGACAAATGGATCAACATCGGCTATGAGGGTGAGGAGTTGAAGCCATACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592207.5
CDS-3UTR CAA 90 bp GACAATGGTTTGTCCGGTGTCTGTGTCAGAATCCCTGTCTCCCACAGACAGAGCTTTGTCTTTCATGATTaGCTCGAGAGTACAGCGTTT +
Preference number: 5 (lower is better)
Translates to: DNGLSGVCVRIPVSHRQSFVFHD*LESTAF
Trigger: AAACGCTGTACTCTCGAGCAAATCATGAAAGACAAA...GCTCTGTCTGTGGGAGACAGGGATTCTGACACAGACACCGGACAAACCATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp TGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGCAGAAACAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 5 (lower is better)
Translates to: CPGTFAGKLTMRVFLLQKQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...TTTCTGCAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp AGCTCCTCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTCAGAGGGGACAATCTTaGCCCCCAAATATAATTCAG +
Preference number: 5 (lower is better)
Translates to: SSSRDLCRGEGVGYLQGFQRGQS*PPNIIQ
Trigger: CTGAATTATATTTGGGGGCAAAGATTGTCCCCTCTG...AAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGAGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000620044.4
ENST00000622871.1
CDS-3UTR CAA 90 bp GTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTAGCCCATACCACTCTCTTAAATTTATaGGGCAACAGGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VLLAGQGLFDFFPCVAHTTLLNL*GNRLQV
Trigger: CACCTGCAGCCTGTTGCCCAATAAATTTAAGAGAGT...GGTATGGGCTACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp AGAGTCTGCCCTGGGACTTTTGCTGGGAAACTGACAATGAGGGTCTTTCTGCTGTTTGTCTTTCATGATTaGCTCGAGAGTACAGCGTTT +
Preference number: 5 (lower is better)
Translates to: RVCPGTFAGKLTMRVFLLFVFHD*LESTAF
Trigger: AAACGCTGTACTCTCGAGCAAATCATGAAAGACAAA...CAGCAGAAAGACCCTCATTGTCAGTTTCCCAGCAAAAGTCCCAGGGCAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAGCGTAGATGGATTATTAGTCCTAATACAGCATTTCTCTTGCTGATTCTCCATCTTGCTCCCTGGCCCTaGTATGTGCCATTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: QRRWIISPNTAFLLLILHLAPWP*YVPFAV
Trigger: CACAGCAAATGGCACATACAAGGGCCAGGGAGCAAG...ATGGAGAATCAGCAAGAGAAATGCTGTATTAGGACTAATAATCCATCTACGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTGTCACATGCCATTTGTaGAGGACCTGTCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSVTCHL*RTCPLS
Trigger: AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGAC...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CACTTCGTTGTACTTCTGGCTGGTCAAGGACTCTTTGATTTCTTCCCGTGTGTACCTAATTTTGAGCTGTaGGGAGGAATGGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: HFVVLLAGQGLFDFFPCVPNFEL*GGMEDF
Trigger: GAAATCTTCCATTCCTCCCAACAGCTCAAAATTAGG...TACACACGGGAAGAAATCAAAGAGTCCTTGACCAGCCAGAAGTACAACGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620044.4
CDS-3UTR CAA 90 bp TCAAGAGACCTTTGCAGAGGGGAGGGTGTGGGGTATTTACAAGGATTTGTACAAAATACAGCATTTCTCTaGCTGATTCTCCATCCATGC +
Preference number: 5 (lower is better)
Translates to: SRDLCRGEGVGYLQGFVQNTAFL*LILHPC
Trigger: GCATGGATGGAGAATCAGCAAGAGAAATGCTGTATT...TTGTACAAATCCTTGTAAATACCCCACACCCTCCCCTCTGCAAAGGTCTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS-3UTR CAA 90 bp CAATTCTACACTTACAAAGTCACATGCCATTTGTTGAGGACCTGTCCTCTCTCTAATACAGCATTTCTCTaGCTGATTCTCCATCCATGC +
Preference number: 5 (lower is better)
Translates to: QFYTYKVTCHLLRTCPLSNTAFL*LILHPC
Trigger: GCATGGATGGAGAATCAGCAAGAGAAATGCTGTATT...AGAGAGAGGACAGGTCCTCAACAAATGGCATGTGACTTTGTAAGTGTAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS GCA 72 bp CCCGCCGGTCCCGGACCTGGCCACCATGGAAGGTGCTaGGGATGGTGGAACCACGTGCCAGGCGGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: PAGPGPGHHGRC*GWWNHVPGGSA
Trigger: AGCGGAGCCGCCTGGCACGTGGTTCCACCATCCGCAGCACCTTCCATGGTGGCCAGGTCCGGGACCGGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS GCA 72 bp CTGCCCGCCGGTCCCGGACCTGGCCACCATGGAAGGTaGTGCGGATGGTGGAACCACGTGCCAGGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: LPAGPGPGHHGR*CGWWNHVPGGS
Trigger: GGAGCCGCCTGGCACGTGGTTCCACCATCCGCAGCACCTTCCATGGTGGCCAGGTCCGGGACCGGCGGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS CAA 90 bp TTCCGGCAACGGGCACCCAGTGAGCGGCTGGACCAGGACGGGCCTTaGTCCGAGGAGCGGCCACTGCCCAAGGTGCCATGCTGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: FRQRAPSERLDQDGP*SEERPLPKVPCWAG
Trigger: CCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS CAA 72 bp CGGGCACCCAGTGAGCGGCTGGACCAGGACGGGCCTTaGTCCGAGGAGCGGCCACTGCCCAAGGTGCCATGC +
Preference number: 6 (lower is better)
Translates to: RAPSERLDQDGP*SEERPLPKVPC
Trigger: GCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000587566.5
ENST00000590909.1
CDS CAA 90 bp TTCCGGCAACGGGCACCCAGTGAGCGGCTGGACCAGGACGGGCCTTaGTCCGAGGAGCGGCCACTGCCCAAGGTGCCATGCGTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: FRQRAPSERLDQDGP*SEERPLPKVPCVSE
Trigger: CTCGGACACGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS GCA 72 bp TGGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACTaGCCAAGGTGCCATGCTGGGCGGGGGAGATGGAGC +
Preference number: 6 (lower is better)
Translates to: WTRTGLCPRSGH*PRCHAGRGRWS
Trigger: GCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS CCA 72 bp CGATGGAGTTCCGGCAACGGGCACCCAGTGAGCGGCTaGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: RWSSGNGHPVSG*TRTGLCPRSGH
Trigger: GTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAACTCCATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000587566.5
ENST00000590909.1
CDS CAA 72 bp GCCCAAGGTGCCATGCTCTTTCCGTCACTCAGGGCGTaGCACTGGGGTGAGCGTCCAGAGCTGGGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: AQGAMLFPSLRA*HWGERPELGPG
Trigger: CCCCGGCCCCAGCTCTGGACGCTCACCCCAGTGCAACGCCCTGAGTGACGGAAAGAGCATGGCACCTTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587566.5
CDS CAA 90 bp TTCCGGCAACGGGCACCCAGTGAGCGGCTGGACCAGGACGGGCCTTaGTCCGAGGAGCGGCCACTGCCCAAGGTGCCATGCTCTTTCCGT +
Preference number: 6 (lower is better)
Translates to: FRQRAPSERLDQDGP*SEERPLPKVPCSFR
Trigger: ACGGAAAGAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587566.5
CDS TCA 72 bp ACAGGAGGCGATGGAGTTCCGGCAACGGGCACCCAGTaGGCGGCTGGACCAGGACGGGCCTTTGTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: TGGDGVPATGTQ*AAGPGRAFVRG
Trigger: TCCTCGGACAAAGGCCCGTCCTGGTCCAGCCGCTCACTGGGTGCCCGTTGCCGGAACTCCATCGCCTCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000587566.5
ENST00000590909.1
CDS GCA 72 bp TGGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACTaGCCAAGGTGCCATGCGTGTCCGAGTTCCGATCGT +
Preference number: 6 (lower is better)
Translates to: WTRTGLCPRSGH*PRCHACPSSDR
Trigger: ACGATCGGAACTCGGACACGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS GCA 72 bp TGGACCAGGACGGGCCTTTGTCCGAGGAGCGGCCACTaGCCAAGGTGCCATGCTCTTTCCGTCACTCAGGGC +
Preference number: 6 (lower is better)
Translates to: WTRTGLCPRSGH*PRCHALSVTQG
Trigger: GCCCTGAGTGACGGAAAGAGCATGGCACCTTGGGCAGTGGCCGCTCCTCGGACAAAGGCCCGTCCTGGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587566.5
CDS CCA 72 bp ACTCACGGGGGTGCTCGTGCTGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: THGGARAVLPPL*DLCLVGVVGAA
Trigger: AGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCACGAGCACCCCCGTGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588621.5
CDS CAA 72 bp CTGCCCAAGGTGCCATGCGTGTCCGAGTTCCGATCGTaGCCCGGGGCCAGCACCGTCCGCGAAGACATCTTC +
Preference number: 6 (lower is better)
Translates to: LPKVPCVSEFRS*PGASTVREDIF
Trigger: GAAGATGTCTTCGCGGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGACACGCATGGCACCTTGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS CAA 72 bp TCGAGGGTAACCCTTCGGGTCAGTTTGGAGGTCAGCTaGGTGAAGAGGTTGGTGGTGGGGCGGGGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: SRVTLRVSLEVS*VKRLVVGRGRP
Trigger: CGGGCGGCCCCGCCCCACCACCAACCTCTTCACCAAGCTGACCTCCAAACTGACCCGAAGGGTTACCCTCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS TCA 72 bp GCCCAAGGTGCCATGCTGGGCGGGGGAGATGGAGCATaGGCTATCCAATCCCACCTTCCGTGGAACCCGTGG +
Preference number: 6 (lower is better)
Translates to: AQGAMLGGGDGA*AIQSHLPWNPW
Trigger: CCACGGGTTCCACGGAAGGTGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS GCA 72 bp TGCCCAAGGTGCCATGCGTGTCCGAGTTCCGATCGTTaGCCGGGGCCAGCACCGTCCGCGAAGACATCTTCT +
Preference number: 6 (lower is better)
Translates to: CPRCHACPSSDR*PGPAPSAKTSS
Trigger: AGAAGATGTCTTCGCGGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGACACGCATGGCACCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS CCA 72 bp GTTGTTGGGGGTGCTCGTGCTGTCCTTCCGCCGCTCTaGGATCTCTGCCTTGTTGGGGTTGTGGGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: VVGGARAVLPPL*DLCLVGVVGAA
Trigger: AGCAGCGCCCACAACCCCAACAAGGCAGAGATCCCAGAGCGGCGGAAGGACAGCACGAGCACCCCCAACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262891.9
ENST00000300843.8
CDS GCA 72 bp GCAAGAGGTTCTCAGCCGTGTCCGAGTTCCGATCGTTaGCCGGGGCCAGCACCGTCCGCGAAGACATCTTCT +
Preference number: 6 (lower is better)
Translates to: ARGSQPCPSSDR*PGPAPSAKTSS
Trigger: AGAAGATGTCTTCGCGGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGACACGGCTGAGAACCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS CCA 72 bp GGCCACTGCCCAAGGTGCCATGCTGGGCGGGGGAGATaGAGCATGAGCTATCCAATCCCACCTTCCGTGGAA +
Preference number: 6 (lower is better)
Translates to: GHCPRCHAGRGR*SMSYPIPPSVE
Trigger: TTCCACGGAAGGTGGGATTGGATAGCTCATGCTCCATCTCCCCCGCCCAGCATGGCACCTTGGGCAGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590909.1
CDS CAA 72 bp AGCAAGAGGTTCTCAGCCGTGTCCGAGTTCCGATCGTaGCCCGGGGCCAGCACCGTCCGCGAAGACATCTTC +
Preference number: 6 (lower is better)
Translates to: SKRFSAVSEFRS*PGASTVREDIF
Trigger: GAAGATGTCTTCGCGGACGGTGCTGGCCCCGGGCAACGATCGGAACTCGGACACGGCTGAGAACCTCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592762.5
ENST00000620044.4
CDS GCA 72 bp GGCAGAGAGGCGCCCGAAACACAGCGGTTAGAGTTCTaGCGTTTAGAGGGATCGAGGGTAACCCTGCGGGTC +
Preference number: 6 (lower is better)
Translates to: GREAPETQRLEF*RLEGSRVTLRV
Trigger: GACCCGCAGGGTTACCCTCGATCCCTCTAAACGGCAGAACTCTAACCGCTGTGTTTCGGGCGCCTCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622871.1
CDS GCA 72 bp GGCAGAGAGGCGCCCGAAACACAGCGGTTAGAGTTCTaGCGTTTAGAGGGATCGAGGGTAACCCTTCGGGTC +
Preference number: 6 (lower is better)
Translates to: GREAPETQRLEF*RLEGSRVTLRV
Trigger: GACCCGAAGGGTTACCCTCGATCCCTCTAAACGGCAGAACTCTAACCGCTGTGTTTCGGGCGCCTCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300843.8
CDS CCA 72 bp TCTCTCAGGTTCGTCTGCGACCTGATCTTGGATCCCTaGGGCAGAGAGGCGCCCGAAACACAGCGGTTAGAG +
Preference number: 6 (lower is better)
Translates to: SLRFVCDLILDP*GREAPETQRLE
Trigger: CTCTAACCGCTGTGTTTCGGGCGCCTCTCTGCCCCAGGGATCCAAGATCAGGTCGCAGACGAACCTGAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300843.8
ENST00000622871.1
CDS CCA 72 bp GTCTTTCATGATTTGCTCGAGAGTACAGCGTTTAGCTaGGTTCAGCACCAAAAATCTCCGCAGGATGCTCTC +
Preference number: 6 (lower is better)
Translates to: VFHDLLESTAFS*VQHQKSPQDAL
Trigger: GAGAGCATCCTGCGGAGATTTTTGGTGCTGAACCCAGCTAAACGCTGTACTCTCGAGCAAATCATGAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262891.9
ENST00000300843.8
ENST00000588621.5
ENST00000592207.5
CDS TCA 72 bp AAATCCTTTCTGCCAAGAGTACGTTCTGCACTTCTTTaGCACAGAACACTAATTTATACGCTAACATCAAAT +
Preference number: 6 (lower is better)
Translates to: KSFLPRVRSALL*HRTLIYTLTSN
Trigger: ATTTGATGTTAGCGTATAAATTAGTGTTCTGTGTCAAAGAAGTGCAGAACGTACTCTTGGCAGAAAGGATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588621.5