RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000072518

Ensembl transcript IDs: ENST00000350490.11, ENST00000361128.9, ENST00000377810.8, ENST00000402010.8, ENST00000408948.7, ENST00000425897.3, ENST00000502399.7, ENST00000508192.5, ENST00000509502.6, ENST00000512060.1, ENST00000513765.7, ENST00000535116.1, ENST00000543674.1, ENST00000676602.1, ENST00000677303.1, ENST00000677688.1, ENST00000678482.1, ENST00000678662.1, ENST00000679213.1, ENST00000679216.1, ENST00000679321.1

Found 1143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTaGGGCGGCGCAGCGGCCGGCAGCCCGTCCAGCTGGCCCGCCCCC +
Preference number: 1 (lower is better)
Translates to: PAGETHQSIAAVSPR*GGAAAGSPSSWPAP
Trigger: GGGGGCGGGCCAGCTGGACGGGCTGCCGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
3UTR CCA 90 bp GGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTaGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAG +
Preference number: 1 (lower is better)
Translates to: GRRSRPCCLTQPSAR*PSAVSPERRGRQCQ
Trigger: CTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR GCA 90 bp GGCGAGGGGGCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTaGCCAGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCC +
Preference number: 1 (lower is better)
Translates to: GEGAVLSDKGSPITE*PVALLWRPTAQAAP
Trigger: GGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGCCCCCTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR GCA 90 bp CTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTGCTaGCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCT +
Preference number: 1 (lower is better)
Translates to: LSVPHPVEGRRSRPC*LTQPSARWPSAVSP
Trigger: AGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR GCA 90 bp AGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTaGTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCT +
Preference number: 1 (lower is better)
Translates to: SLSVPHPVEGRRSRP*CLTQPSARWPSAVS
Trigger: AGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR CCA 90 bp GCCCCAAACCGCCCACGCCCACACTGGCCACTGAGGGTAGCAAGCTaGGAGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: APNRPRPHWPLRVAS*ESLSLSVPHPVEGR
Trigger: TCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACTCCCAGCTTGCTACCCTCAGTGGCCAGTGTGGGCGTGGGCGGTTTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR CCA 90 bp AGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCCACACTaGCCACTGAGGGTAGCAAGCTGGGAGTCGCTTAGCCTATCTGTC +
Preference number: 1 (lower is better)
Translates to: SGHHQPSAPNRPRPH*PLRVASWESLSLSV
Trigger: GACAGATAGGCTAAGCGACTCCCAGCTTGCTACCCTCAGTGGCCAGTGTGGGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR TCA 90 bp TGGCACCAATGTGCCTGCCAGGCATCCCAGTCCCAATGCAGGGCCTaGGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTG +
Preference number: 1 (lower is better)
Translates to: WHQCACQASQSQCRA*ADSLGEQALLTWPL
Trigger: CAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAGGCCCTGCATTGGGACTGGGATGCCTGGCAGGCACATTGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CCA 90 bp CTGCCAGGCATCCCAGTCCCAATGCAGGGCCTGAGCAGACAGCCTTaGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGCTTGGT +
Preference number: 1 (lower is better)
Translates to: LPGIPVPMQGLSRQP*GTSTLNLALGLQLG
Trigger: ACCAAGCTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAGGCCCTGCATTGGGACTGGGATGCCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR TCA 90 bp ATGCAGTCAACAGCTGGGTGGGAGGAGGAGGGGATAGGGAAAGCCTaGAGACCCTGTCTGGACGTTCCTCCATCAGCTGTGGCACCAATG +
Preference number: 1 (lower is better)
Translates to: MQSTAGWEEEGIGKA*RPCLDVPPSAVAPM
Trigger: CATTGGTGCCACAGCTGATGGAGGAACGTCCAGACAGGGTCTTCAGGCTTTCCCTATCCCCTCCTCCTCCCACCCAGCTGTTGACTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CCA 90 bp GGAAGGCCCTCATTTTTAAAGCCATTTGCCCTGAGTGGGCCAATGTaGCCTCTTAGCCCTGCCTGTTTGTACTGGGGGCACGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: GRPSFLKPFALSGPM*PLSPACLYWGHGGQ
Trigger: CTGCCCTCCGTGCCCCCAGTACAAACAGGCAGGGCTAAGAGGCCACATTGGCCCACTCAGGGCAAATGGCTTTAAAAATGAGGGCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CCA 90 bp GGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGCTTGGTATTTaGTCCCCGAGGCCTGCAGAGAGGATGAGCATAAGGCCAGGGGTG +
Preference number: 1 (lower is better)
Translates to: GTSTLNLALGLQLGI*SPRPAERMSIRPGV
Trigger: CACCCCTGGCCTTATGCTCATCCTCTCTGCAGGCCTCGGGGACCAAATACCAAGCTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CCA 90 bp CCTTGTGCTGATGCCCAATCAGAGGCAGTCTTCATCCCTTTAAGATaGCAGAGAGAGGAGGGCCACACAGACTTGGTTAAGCAGATGGAG +
Preference number: 1 (lower is better)
Translates to: PCADAQSEAVFIPLR*QREEGHTDLVKQME
Trigger: CTCCATCTGCTTAACCAAGTCTGTGTGGCCCTCCTCTCTCTGCCATCTTAAAGGGATGAAGACTGCCTCTGATTGGGCATCAGCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGGAGGCGGAGCCTTGTaGCGGCCCTCCAGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRGGGAL*RPSSLS
Trigger: GCTGAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCACCCACTGCAGGGCTaGGCAGCACCCCCGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRHPLQG*AAPPPP
Trigger: AGGGGGCGGGGGTGCTGCGCAGCCCTGCAGTGGGTG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 2 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR TCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGCCTGGCGGAGGGCCTaGCGGGAGCTCCACCACTCT +
Preference number: 2 (lower is better)
Translates to: KGSPITECPVALLWRPTAAWRRA*RELHHS
Trigger: AGAGTGGTGGAGCTCCCGTCAGGCCCTCCGCCAGGC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGCCTAACTCAGCCTTCTaGCAGGTGGCCCTCGGCAGT +
Preference number: 2 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVPNSAF*QVALGS
Trigger: ACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGG...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGGAAGGCCACCTCTGGTaGTTTGCTTGGAGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVEGHLW*FAWRGR
Trigger: CCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTC...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGGGGAAGGCCACCTCTaGTGGTTTGCTTGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRGEGHL*WFAWRG
Trigger: TCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCCC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGGGGCAGGGGTGCGGGTaGGTGGGGCTAGTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARGQGCG*VGLVLQ
Trigger: CTGCAGAACTAGCCCCACCCACCCGCACCCCTGCCC...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGTCCACCACTCTTGCCTaGGAGTGTTCCAGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: SGPALETNSPSGPLGTEKSTTLA*ECSSPE
Trigger: CTCAGGGCTGGAACACTCTCAGGCAAGAGTGGTGGA...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR TCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGAGATGGCACAGACTTTaGGGGAACACACGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVRWHRL*GNTRPH
Trigger: GTGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCT...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCCAGTGGCCCTGCTCTaGAGACCAACAGCCCAAGCG +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRPVALL*RPTAQA
Trigger: CGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACTGG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGTCACAGAGTGCCCAGTaGCCCTGCTCTGGAGACCAA +
Preference number: 2 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRSQSAQ*PCSGDQ
Trigger: TTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGA...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCGGGAAGTCACTGCTATaGAGAGAGCTGGTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAGKSLL*RELVPR
Trigger: TCTGGGCACCAGCTCTCTCCATAGCAGTGACTTCCC...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGGCCAGACTGAAACCTTaGGGCCCCAGGGTCCCCGTA +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRARLKP*GPRVPV
Trigger: TACGGGGACCCTGGGGCCCCAAGGTTTCAGTCTGGC...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGAGATGGCACAGACTTTaGGGGAACACACGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: SGPALETNSPSGPLGTEKRWHRL*GNTRPH
Trigger: GTGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCT...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PCCLTQPSARWPSAVSPETPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCCACCCACTGCAGGGCTaGGCAGCACCCCCGCCCCCT +
Preference number: 2 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAHPLQG*AAPPPP
Trigger: AGGGGGCGGGGGTGCTGCGCAGCCCTGCAGTGGGTG...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCCTAACTCAGCCTTCTaGCAGGTGGCCCTCGGCAGT +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRPNSAF*QVALGS
Trigger: ACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTTCTACCCGGGAGGGGTaGGAGAAGATGGCACAGACT +
Preference number: 2 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPSTREG*EKMAQT
Trigger: AGTCTGTGCCATCTTCTCCCACCCCTCCCGGGTAGA...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGTTCCCTCCACTTCCTaGCCGCAGGGGACAGACCCA +
Preference number: 2 (lower is better)
Translates to: KGSPITECPVALLWRPTAVPSTS*PQGTDP
Trigger: TGGGTCTGTCCCCTGCGGCCAGGAAGTGGAGGGAAC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR CCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 2 (lower is better)
Translates to: LTQPSARWPSAVSPERRGPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR TCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGTCCCAATGCAGGGCCTaGGCAGACAGCCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARSQCRA*ADSLGE
Trigger: TTCCCCAAGGCTGTCTGCTCAGGCCCTGCATTGGGA...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR GCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR GCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGGAGGCGGAGCCTTGTaGCGGCCCTCCAGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAGGGAL*RPSSLS
Trigger: GCTGAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCAGGGCGAGGGGGCTGTaGTTTCAGACAAAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: KLRDAVATTSQAPQTAHARARGL*FQTKAP
Trigger: GGGAGCCTTTGTCTGAAAGCACAGCCCCCTCGCCCT...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCTCTGGTGGTTTGCTTaGAGGGGAAGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRLWWFA*RGRREE
Trigger: CTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR CCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTGGGAAGTCACTGCTATaGAGAGAGCTGGTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPGKSLL*RELVPR
Trigger: TCTGGGCACCAGCTCTCTCCATAGCAGTGACTTCCC...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
3UTR-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGGGTGAGGGAAGTCACTaGTATGGAGAGAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRGEGSH*YGESWC
Trigger: GCACCAGCTCTCTCCATAGCAGTGACTTCCCTCACC...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR CCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGGAAGGCCACCTCTGGTaGTTTGCTTGGAGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: KTQPTQGCTQAHCEQGAREGHLW*FAWRGR
Trigger: CCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTC...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCGCAGAGGGTACAGTGTaGAGGGAGGCGGAGCCTTGT +
Preference number: 2 (lower is better)
Translates to: AVLSDKGSPITECPVALLAEGTV*REAEPC
Trigger: ACAAGGCTCCGCCTCCCTCCACACTGTACCCTCTGC...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 2 (lower is better)
Translates to: AVLSDKGSPITECPVALLDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR CCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR CCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCCCTGCCTGTTTGTACTaGGGGCACGGAGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVPACLY*GHGGQA
Trigger: GGCCTGCCCTCCGTGCCCCCAGTACAAACAGGCAGG...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGCTGAGTGGGCCAATGTaGCCTCTTAGCCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARLSGPM*PLSPAC
Trigger: ACAGGCAGGGCTAAGAGGCCACATTGGCCCACTCAG...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LTQPSARWPSAVSPERRGHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR TCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR TCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 2 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR TCA 90 bp ACTCCACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCGGGCAGGCCTTGTGCTaGTGCCCAATCAGAGGCAGT +
Preference number: 2 (lower is better)
Translates to: TPREAEGAGLGLPKFFLFGQALC*CPIRGS
Trigger: ACTGCCTCTGATTGGGCATCAGCACAAGGCCTGCCC...GAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGCAGTCTCCCCTTACTTaGGGACAGGCGTTAACTGTG +
Preference number: 2 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEQSPLT*GQALTV
Trigger: CACAGTTAACGCCTGTCCTCAAGTAAGGGGAGACTG...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: GLGEILCATAVPRGSPAPVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTCTACCCGGGAGGGGTaGGAGAAGATGGCACAGACT +
Preference number: 2 (lower is better)
Translates to: AVLSDKGSPITECPVALLSTREG*EKMAQT
Trigger: AGTCTGTGCCATCTTCTCCCACCCCTCCCGGGTAGA...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCRRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KLRDAVATTSQAPQTAHAHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGGGGCTGTGCTGTTCTaGGAGGGAGAACTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPGAVLF*EGELEK
Trigger: CTTTTCCAGTTCTCCCTCTCAGAACAGCACAGCCCC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR TCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR GCA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: HVKRRERGLASRNSSFSLTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR GCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCCCTAACTCAGCCTTCTaGCAGGTGGCCCTCGGCAGT +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVPNSAF*QVALGS
Trigger: ACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGG...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGGGGAAGGCCACCTCTaGTGGTTTGCTTGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHGEGHL*WFAWRG
Trigger: TCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCCC...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCAGAGGGTACAGTGTaGAGGGAGGCGGAGCCTTGT +
Preference number: 2 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHAEGTV*REAEPC
Trigger: ACAAGGCTCCGCCTCCCTCCACACTGTACCCTCTGC...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
3UTR-3UTR TCA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGGTGGGGTGGGGTGGGTaGGAGGAGACAATCTTAAAG +
Preference number: 2 (lower is better)
Translates to: RRERGLASRNSSFSLSLPVGWGG*EETILK
Trigger: CTTTAAGATTGTCTCCTCTCACCCACCCCACCCCAC...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGAGAGGAGAAGAGGCTTaGTTTATCCAGATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRRGEEA*FIQMLL
Trigger: CAGCAGCATCTGGATAAATCAAGCCTCTTCTCCTCT...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR GCA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGGGTGAGGGAAGTCACTaGTATGGAGAGAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: RRERGLASRNSSFSLSLPGEGSH*YGESWC
Trigger: GCACCAGCTCTCTCCATAGCAGTGACTTCCCTCACC...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR CCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGTTCATCCCTTTAAGATaGCAGAGAGAGGAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARFIPLR*QREEGH
Trigger: GTGGCCCTCCTCTCTCTGCCATCTTAAAGGGATGAA...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGGGATAGGGAAAGCCTaGAGACCCTGTCTGGACGTT +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVGIGKA*RPCLDV
Trigger: AACGTCCAGACAGGGTCTTCAGGCTTTCCCTATCCC...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR TCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGGTGAAGGGAGACCCCTaGGTAAGGGTGCAGAGATCT +
Preference number: 2 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQVKGDP*VRVQRS
Trigger: AGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCAC...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR GCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 2 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARSPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: KFLGLGEILCATAVPRGSTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR GCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGCTTGATTTATCCAGATaGTGCTGGTGGCAGGGGTGC +
Preference number: 2 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQLDLSR*CWWQGC
Trigger: GCACCCCTGCCACCAGCAGCATCTGGATAAATCAAG...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: FLGLGEILCATAVPRGSPVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR CCA 90 bp ATCTCCTGTTGTTTTGCTACGGCTTGGGGTAGAATGGCCGTTGCCCTAGAATGTTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 2 (lower is better)
Translates to: ISCCFATAWGRMAVALECSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...ACATTCTAGGGCAACGGCCATTCTACCCCAAGCCGTAGCAAAACAACAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CAA 90 bp GAGACAATCTTAAAGGGAGGCTTCCCTGAGACAGTCTCCCCTTACTaGAGGACAGGCGTTAACTGTGGGCCCAAGGAAGGCCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: ETILKGGFPETVSPY*RTGVNCGPKEGPHF
Trigger: AAAATGAGGGCCTTCCTTGGGCCCACAGTTAACGCCTGTCCTCAAGTAAGGGGAGACTGTCTCAGGGAAGCCTCCCTTTAAGATTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR TCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACTCCTTCTGGCAAACCTaGAAGACAGATTTCTGCGTA +
Preference number: 2 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHSFWQT*KTDFCV
Trigger: TACGCAGAAATCTGTCTTTCAGGTTTGCCAGAAGGA...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR TCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KFLGLGEILCATAVPRGSHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR GCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCATTTTTAAAGCCATTTaGCCTGAGTGGGCCAATGTG +
Preference number: 2 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVIFKAI*PEWANV
Trigger: CACATTGGCCCACTCAGGGCAAATGGCTTTAAAAAT...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGGTGATGAAGAGGGGTaGAGTCATCATAAATCAAAA +
Preference number: 2 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAGDEEG*SHHKSK
Trigger: TTTTGATTTATGATGACTCCACCCCTCTTCATCACC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR GCA 72 bp GTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTaGTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: VPHPVEGRRSRP*CLTQPSARWPS
Trigger: CGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CAA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGAGGGAGGCGGAGCCTaGTGCCGGCCCTCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: KGSPITECPVALLWRPTAEGGGA*CRPSSL
Trigger: GAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCCCTC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CAA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCGAGGGAGGCGGAGCCTaGTGCCGGCCCTCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: KLRDAVATTSQAPQTAHAEGGGA*CRPSSL
Trigger: GAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCCCTC...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR CCA 72 bp TCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTaGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGA +
Preference number: 3 (lower is better)
Translates to: SRPCCLTQPSAR*PSAVSPERRGR
Trigger: TCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR CCA 72 bp CCCGTCCAGCTGGCCCGCCCCCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCAGCTCGTTGGCTATTT +
Preference number: 3 (lower is better)
Translates to: PVQLARPRRPRS*QPVKASARWLF
Trigger: AAATAGCCAACGAGCTGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCGGGGGCGGGCCAGCTGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR GCA 72 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTaGTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: TKAPPSQSAQWP*SGDQQPKRPPG
Trigger: CCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CAA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGCGTCCCCACAGCAGCTaGTGGAAGGAAATGCCCAGC +
Preference number: 3 (lower is better)
Translates to: SGPALETNSPSGPLGTEKRPHSS*WKEMPS
Trigger: GCTGGGCATTTCCTTCCACAAGCTGCTGTGGGGACG...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CAA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGGCAGGAGGGCTGAGGTaGGCAAGGCCCCTTCCTAGG +
Preference number: 3 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRAGGLR*ARPLPR
Trigger: CCTAGGAAGGGGCCTTGCCAACCTCAGCCCTCCTGC...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR CCA 72 bp CGCCCACGCCCACACTGGCCACTGAGGGTAGCAAGCTaGGAGTCGCTTAGCCTATCTGTCCCCCACCCTGTG +
Preference number: 3 (lower is better)
Translates to: RPRPHWPLRVAS*ESLSLSVPHPV
Trigger: CACAGGGTGGGGGACAGATAGGCTAAGCGACTCCCAGCTTGCTACCCTCAGTGGCCAGTGTGGGCGTGGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR GCA 72 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTaGGAGCAGGGAGCCCGGCTGTGCGAGGAAGGCACC +
Preference number: 3 (lower is better)
Translates to: KTQPTQGCTQAH*EQGARLCEEGT
Trigger: GGTGCCTTCCTCGCACAGCCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR-3UTR CAA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGAAGATGGCACAGACTTaGAGGGAACACACGTCCCCA +
Preference number: 3 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVKMAQT*REHTSP
Trigger: TGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCTT...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR-3UTR CAA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677688.1
3UTR-3UTR CAA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGGCCACCTCTGGTGGTTaGCTTGGAGGGGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: RRERGLASRNSSFSLSLPATSGG*LGGEGG
Trigger: CCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGC...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR GCA 72 bp ACTGCACGAAGTCCTCGTGGCCCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCTCATGCAGCTCGCTCT +
Preference number: 3 (lower is better)
Translates to: TARSPRGPACRA*TAACTSHAARS
Trigger: AGAGCGAGCTGCATGAGAAGTACATGCTGCTGTGCATGCACGGCACGCCGGGCCACGAGGACTTCGTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR-3UTR CAA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGCTTAGCCCTGCCTGTTaGTACTGGGGGCACGGAGGG +
Preference number: 3 (lower is better)
Translates to: HVKRRERGLASRNSSFSLLSPAC*YWGHGG
Trigger: CCCTCCGTGCCCCCAGTACAAACAGGCAGGGCTAAG...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR TCA 72 bp TGTGCCTGCCAGGCATCCCAGTCCCAATGCAGGGCCTaGGCAGACAGCCTTGGGGAACAAGCACTCTTAACC +
Preference number: 3 (lower is better)
Translates to: CACQASQSQCRA*ADSLGEQALLT
Trigger: GGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAGGCCCTGCATTGGGACTGGGATGCCTGGCAGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR GCA 72 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTaGCCAGTGGCCCTGCTCTGGAGACCAACAGCCCAA +
Preference number: 3 (lower is better)
Translates to: AVLSDKGSPITE*PVALLWRPTAQ
Trigger: TTGGGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
3UTR CCA 72 bp ATGCACAGCAGCATGTACTTCTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGCACCTTGCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: MHSSMYFSCSSL*QLFASSTLRIS
Trigger: GGAGATCCGCAAGGTGCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGAGAAGTACATGCTGCTGTGCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
3UTR GCA 72 bp CCTTGGTCTTCAGCTTGGTATTTGGTCCCCGAGGCCTaGAGAGAGGATGAGCATAAGGCCAGGGGTGAAAGA +
Preference number: 3 (lower is better)
Translates to: PWSSAWYLVPEA*REDEHKARGER
Trigger: TCTTTCACCCCTGGCCTTATGCTCATCCTCTCTGCAGGCCTCGGGGACCAAATACCAAGCTGAAGACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CCA 72 bp AAGGGTGCAGAGATCTCCTGTTGTTTTGCTACGGCTTaGGGTAGAATGGCCGTTGCCCTAGAATGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: KGAEISCCFATA*GRMAVALECPS
Trigger: GCTGGGACATTCTAGGGCAACGGCCATTCTACCCCAAGCCGTAGCAAAACAACAGGAGATCTCTGCACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CCA 72 bp GATGCCCAATCAGAGGCAGTCTTCATCCCTTTAAGATaGCAGAGAGAGGAGGGCCACACAGACTTGGTTAAG +
Preference number: 3 (lower is better)
Translates to: DAQSEAVFIPLR*QREEGHTDLVK
Trigger: CTTAACCAAGTCTGTGTGGCCCTCCTCTCTCTGCCATCTTAAAGGGATGAAGACTGCCTCTGATTGGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCTCCGCCTACTCTCTaGCGCCGCAGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPAPPTL*RRSRPP
Trigger: AGGCGGCCGGCTGCGGCGGCAGAGAGTAGGCGGAGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCCGCCGGACCTGCTaGTCCCAACATGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGRRRTC*SQHGRH
Trigger: GTGGCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGAGCCGCCGCCGGACCTaGTGCTCCCAACATGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRSRRRT*CSQHGR
Trigger: GCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCGGCT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGCCCTCAGCGGCACTaGTCCGCGCCCGGCACACAG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRCPQRH*SAPGTQ
Trigger: CTGTGTGCCGGGCGCGGAGCAGTGCCGCTGAGGGCA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGCCCTCAGCGGCACTaGTCCGCGCCCGGCACACAG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGCPQRH*SAPGTQ
Trigger: CTGTGTGCCGGGCGCGGAGCAGTGCCGCTGAGGGCA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCCACTGCAGGGCTaGGCAGCACCCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAHPLQG*AAPPPP
Trigger: AGGGGGCGGGGGTGCTGCGCAGCCCTGCAGTGGGTG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCACCCACTGCAGGGCTaGGCAGCACCCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRHPLQG*AAPPPP
Trigger: AGGGGGCGGGGGTGCTGCGCAGCCCTGCAGTGGGTG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCCACCTTGCCTGGGTaGCCCGGGCCCCTACCCCCT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRATLPG*PGPLPP
Trigger: AGGGGGTAGGGGCCCGGGGCACCCAGGCAAGGTGGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGCCACCTTGCCTGGGTaGCCCGGGCCCCTACCCCCT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRATLPG*PGPLPP
Trigger: AGGGGGTAGGGGCCCGGGGCACCCAGGCAAGGTGGC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCTGTCCCCCACCCTGTaGAGGGCAGACGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGLSPTL*RADAPG
Trigger: GCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGGCCTGGCGGAGGGCCTaGCGGGAGCTCCACCACTCT +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKAWRRA*RELHHS
Trigger: AGAGTGGTGGAGCTCCCGTCAGGCCCTCCGCCAGGC...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCGCCGCCGGACCTGCTaGTCCCAACATGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRRRTC*SQHGRH
Trigger: GTGGCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAGCCGCCGCCGGACCTaGTGCTCCCAACATGGCCGC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASRRRT*CSQHGR
Trigger: GCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCGGCT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGAGCCGCCGCCGGACCTaGTGCTCCCAACATGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRSRRRT*CSQHGR
Trigger: GCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCGGCT...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGAGGCGGAGCCTTGTaGCGGCCCTCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAGGGAL*RPSSLS
Trigger: GCTGAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGCAGGACCAGCTGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGAGPAA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCAGCTGGTCCTGC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCAGGACCAGCTGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPAGPAA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCAGCTGGTCCTGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCCAAGCGGCCCCCTaGGGACCGAGAAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAQAAP*GPRSQS
Trigger: AGACTGGCTTCTCGGTCCCCAGGGGGCCGCTTGGGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCAGCTGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPQLPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCAGCTG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRDQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVADQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377810.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGGCTCGGCTTAATCGCTaGGCCTGGCCTGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKARLNR*AWPGSG
Trigger: CCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGC...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGACATGGATTTCTGGTaGTGGCGGGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAADMDFW*WRGRAA
Trigger: TGCGGCCCGGCCCCGCCAGCACCAGAAATCCATGTC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGACATGGATTTCTGGTaGTGGCGGGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPDMDFW*WRGRAA
Trigger: TGCGGCCCGGCCCCGCCAGCACCAGAAATCCATGTC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGAGGCCGAGCGGTTCCTaGCTGGGAACCTGGACGGTG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPRPSGS*LGTWTV
Trigger: CACCGTCCAGGTTCCCAGGCAGGAACCGCTCGGCCT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTCCGAGCGCTGGACATaGCGCCGGTATCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPSERWT*RRYLGG
Trigger: TCCCCCGAGATACCGGCGCCATGTCCAGCGCTCGGA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCAGGACCAGCTGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRAGPAA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCAGCTGGTCCTGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGATGGCAGGACCAGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRMAGPA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCAT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGATGGCAGGACCAGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAMAGPA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCAT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGCCCAAGCGGCCCCCTaGGGACCGAGAAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRAQAAP*GPRSQS
Trigger: AGACTGGCTTCTCGGTCCCCAGGGGGCCGCTTGGGC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCGCCCACGCCCACACTaGCCACTGAGGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPRPRPH*PLRVAS
Trigger: GCTTGCTACCCTCAGTGGCCAGTGTGGGCGTGGGCG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCAGAAGCAGAAGCCGTaGAGGCCCGGGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAQKQKP*RPGTLA
Trigger: TGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCAGAAGCAGAAGCCGTaGAGGCCCGGGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPQKQKP*RPGTLA
Trigger: TGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCCTTGGTTGGGTGGGTaGGGAAGAGGTCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAPWLGG*GRGLAP
Trigger: CGGGGCCAGACCTCTTCCCCACCCACCCAACCAAGG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGADQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGCTCGGCAGTGTCTCCTaGGAGGAGGGGGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKLGSVS*EEGATV
Trigger: CACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAG...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGGGGGAGCCCTTGGTCTaGGCCGCAGTAGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKGEPLV*AAVGVW
Trigger: CCACACTCCTACTGCGGCTCAGACCAAGGGCTCCCC...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGAGCCGCCGCCGGACCTaGTGCTCCCAACATGGCCGC +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRSRRRT*CSQHGR
Trigger: GCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCGGCT...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGTGCCCTCAGCGGCACTaGTCCGCGCCCGGCACACAG +
Preference number: 4 (lower is better)
Translates to: PCCLTQPSARWPSAVSPECPQRH*SAPGTQ
Trigger: CTGTGTGCCGGGCGCGGAGCAGTGCCGCTGAGGGCA...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCTCCGCCTACTCTCTaGCGCCGCAGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAPPTL*RRSRPP
Trigger: AGGCGGCCGGCTGCGGCGGCAGAGAGTAGGCGGAGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGCTCCGCCTACTCTCTaGCGCCGCAGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPAPPTL*RRSRPP
Trigger: AGGCGGCCGGCTGCGGCGGCAGAGAGTAGGCGGAGC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAASLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCCGGGCCGCAGAGACTaGGGCAGAAGCAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRPGRRD*GRSRSR
Trigger: ACGGCTTCTGCTTCTGCCGCAGTCTCTGCGGCCCGG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCGGGCCGCAGAGACTaGGGCAGAAGCAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAPGRRD*GRSRSR
Trigger: ACGGCTTCTGCTTCTGCCGCAGTCTCTGCGGCCCGG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCGGGCCGCAGAGACTaGGGCAGAAGCAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAPGRRD*GRSRSR
Trigger: ACGGCTTCTGCTTCTGCCGCAGTCTCTGCGGCCCGG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCCGAGCGCTGGACATaGCGCCGGTATCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASERWT*RRYLGG
Trigger: TCCCCCGAGATACCGGCGCCATGTCCAGCGCTCGGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAALRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGACTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAACTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRRRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCACAGTTACTCTCCGTaGGGGGCAGCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPHSYSP*GAAQRP
Trigger: AGGCCTCTGGGCTGCCCCCCACGGAGAGTAACTGTG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCCAGTGGCCCTGCTCTaGAGACCAACAGCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAPVALL*RPTAQA
Trigger: CGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACTGG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCAGCCTTCTGCCAGGTaGCCCTCGGCAGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAQPSAR*PSAVSP
Trigger: AGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCTGTCCCCCACCCTGTaGAGGGCAGACGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGLSPTL*RADAPG
Trigger: GCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAG...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCGCCCACGCCCACACTaGCCACTGAGGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRRPRPH*PLRVAS
Trigger: GCTTGCTACCCTCAGTGGCCAGTGTGGGCGTGGGCG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCGCCCACGCCCACACTaGCCACTGAGGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRPRPH*PLRVAS
Trigger: GCTTGCTACCCTCAGTGGCCAGTGTGGGCGTGGGCG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCACGGAGGCCGACATaGATTTCTGGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAARRPT*ISGAGG
Trigger: CCCGCCAGCACCAGAAATCCATGTCGGCCTCCGTGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCACGGAGGCCGACATaGATTTCTGGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPARRPT*ISGAGG
Trigger: CCCGCCAGCACCAGAAATCCATGTCGGCCTCCGTGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGCCCAGAGGCCTTGTTaGGGTGCACGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAAQRPC*GARRPT
Trigger: TGTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCCCAGAGGCCTTGTTaGGGTGCACGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRAQRPC*GARRPT
Trigger: TGTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTCAAGGGCCAGAGCCTaGTGGTCAGGAAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRSRARA*WSGSAC
Trigger: GCACGCGCTTCCTGACCACCAGGCTCTGGCCCTTGA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGAGCGGTTCCTGCCTaGGAACCTGGACGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARAVPA*EPGRCR
Trigger: GCGACACCGTCCAGGTTCCCAGGCAGGAACCGCTCG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTTCCCTCCACTTCCTaGCCGCAGGGGACAGACCCA +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAVPSTS*PQGTDP
Trigger: TGGGTCTGTCCCCTGCGGCCAGGAAGTGGAGGGAAC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGTCTCCAGACCCCCTGTaGGGCAGCCCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGESPDPL*GSPLLG
Trigger: CCCCAGCAGGGGGCTGCCCCACAGGGGGTCTGGAGA...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGCCTGGCGGAGGGCCTaGCGGGAGCTCCACCACTCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPAWRRA*RELHHS
Trigger: AGAGTGGTGGAGCTCCCGTCAGGCCCTCCGCCAGGC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCCTGGCGGAGGGCCTaGCGGGAGCTCCACCACTCT +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGAWRRA*RELHHS
Trigger: AGAGTGGTGGAGCTCCCGTCAGGCCCTCCGCCAGGC...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp GCATGGAAGGTGCTTCGGCTGGACACACCCCGGGGGAAGTTAGTTCGGTCTGGGGCCTGGCGGAGGGCCTaGCGGGAGCTCCACCACTCT +
Preference number: 4 (lower is better)
Translates to: AWKVLRLDTPRGKLVRSGAWRRA*RELHHS
Trigger: AGAGTGGTGGAGCTCCCGTCAGGCCCTCCGCCAGGC...CCCAGACCGAACTAACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCCATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTCCCAATGCAGGGCCTaGGCAGACAGCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRSQCRA*ADSLGE
Trigger: TTCCCCAAGGCTGTCTGCTCAGGCCCTGCATTGGGA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGCCGCCGGACCTGCTaGTCCCAACATGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRRRTC*SQHGRH
Trigger: GTGGCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTGCCCTCAGCGGCACTaGTCCGCGCCCGGCACACAG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRCPQRH*SAPGTQ
Trigger: CTGTGTGCCGGGCGCGGAGCAGTGCCGCTGAGGGCA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAATPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTGTCGTTGCCGCCACTaGCCACCACGTGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAACRCRH*PPREVC
Trigger: GCAGACCTCACGTGGTGGGCAGTGGCGGCAACGACA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350490.11
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCCTAACTCAGCCTTCTaGCAGGTGGCCCTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPPNSAF*QVALGS
Trigger: ACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAGACGCTCCCGGCCCTaGTGCCTAACTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGRRSRP*CLTQPS
Trigger: AGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGAGGCCTTGTTGGGGTaGACGGAGGCCGACATGGAT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPEALLG*TEADMD
Trigger: ATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCTC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCTGCCCCAGCACACTTaGCTGGGCCGCGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGLPQHT*LGRGTS
Trigger: TGAGGTGCCGCGGCCCAGGCAAGTGTGCTGGGGCAG...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCTGTGGCACCAATGTaGCTGCCAGGCATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPAVAPM*LPGIPV
Trigger: GACTGGGATGCCTGGCAGGCACATTGGTGCCACAGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTGCTGCTCCCAACATaGCCGCCACCACCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLLLPT*PPPPPA
Trigger: GGCCGGCGGTGGTGGCGGCCATGTTGGGAGCAGCAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000508192.5
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAARGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAASCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGARRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGGGGAAGGCCACCTCTaGTGGTTTGCTTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRGEGHL*WFAWRG
Trigger: TCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCCC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAGAGGGTACAGTGTaGAGGGAGGCGGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAEGTV*REAEPC
Trigger: ACAAGGCTCCGCCTCCCTCCACACTGTACCCTCTGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCAGTGGCCCTGCTCTaGAGACCAACAGCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAPVALL*RPTAQA
Trigger: CGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACTGG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCAGCCTTCTGCCAGGTaGCCCTCGGCAGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRQPSAR*PSAVSP
Trigger: AGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGCCGCAGTAGGAGTGTaGGGCAGGAGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRAAVGV*GRRAEV
Trigger: AACCTCAGCCCTCCTGCCCCACACTCCTACTGCGGC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTGCCCAGAGGCCTTGTTaGGGTGCACGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPAQRPC*GARRPT
Trigger: TGTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGC...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGGACAAAGCCCCGCTaGCTTCTCAAGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAGTKPR*LLKGQS
Trigger: GCTCTGGCCCTTGAGAAGCCAGCGGGGCTTTGTCCC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGGGCAGGGGTGCGGGTaGGTGGGGCTAGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEGQGCG*VGLVLQ
Trigger: CTGCAGAACTAGCCCCACCCACCCGCACCCCTGCCC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTTATCCAGATGCTGCTaGTGGCAGGGGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGLSRCC*WQGCWG
Trigger: GCCCCAGCACCCCTGCCACCAGCAGCATCTGGATAA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCATCAGCAGAGGTGGCTaGGTTGCGGCCCCGAATCAT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGISRGG*VAAPNH
Trigger: ATGATTCGGGGCCGCAACTCAGCCACCTCTGCTGAT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCATCAGCAGAGGTGGCTaGGTTGCGGCCCCGAATCAT +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAISRGG*VAAPNH
Trigger: ATGATTCGGGGCCGCAACTCAGCCACCTCTGCTGAT...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGATCAGCAGAGGTGGCTaGGTTGCGGCCCCGAATCAT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPISRGG*VAAPNH
Trigger: ATGATTCGGGGCCGCAACTCAGCCACCTCTGCTGAT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCAGCTGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGQLPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCAGCTG...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402010.8
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTCCACCACTCTTGCCTaGGAGTGTTCCAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGSTTLA*ECSSPE
Trigger: CTCAGGGCTGGAACACTCTCAGGCAAGAGTGGTGGA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCCACCACTCTTGCCTaGGAGTGTTCCAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVSTTLA*ECSSPE
Trigger: CTCAGGGCTGGAACACTCTCAGGCAAGAGTGGTGGA...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGGGGAGCCCTTGGTCTaGGCCGCAGTAGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEGEPLV*AAVGVW
Trigger: CCACACTCCTACTGCGGCTCAGACCAAGGGCTCCCC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGGGGGAGCCCTTGGTCTaGGCCGCAGTAGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKGEPLV*AAVGVW
Trigger: CCACACTCCTACTGCGGCTCAGACCAAGGGCTCCCC...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCAGCCGCCGCCGGACCTaGTGCTCCCAACATGGCCGC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPSRRRT*CSQHGR
Trigger: GCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCGGCT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGDWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAADWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGARTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCT +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAPACRA*TAACTS
Trigger: AGAAGTACATGCTGCTGTGCATGCACGGCACGCCGG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPPACRA*TAACTS
Trigger: AGAAGTACATGCTGCTGTGCATGCACGGCACGCCGG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAATPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGATPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCTAACTCAGCCTTCTaGCAGGTGGCCCTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAPNSAF*QVALGS
Trigger: ACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGAGGCCTTGTTGGGGTaGACGGAGGCCGACATGGAT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRREALLG*TEADMD
Trigger: ATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCTC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGAGGCCTTGTTGGGGTaGACGGAGGCCGACATGGAT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAEALLG*TEADMD
Trigger: ATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCTC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGAGGCCTTGTTGGGGTaGACGGAGGCCGACATGGAT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAEALLG*TEADMD
Trigger: ATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCTC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGACCTCGTTGTATCTCTaGCCCACCAGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAATSLYL*PTSESW
Trigger: CCAGGACTCGCTGGTGGGCCAGAGATACAACGAGGT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCACCTCGTTGTATCTCTaGCCCACCAGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVATSLYL*PTSESW
Trigger: CCAGGACTCGCTGGTGGGCCAGAGATACAACGAGGT...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCACCTCGTTGTATCTCTaGCCCACCAGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGTSLYL*PTSESW
Trigger: CCAGGACTCGCTGGTGGGCCAGAGATACAACGAGGT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVALVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGTTCGTGGAGGGGGTTaGGGTGGTCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRVRGGG*GGLLPL
Trigger: GAGAGGAAGAAGACCACCCCAACCCCCTCCACGAAC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGALCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CACACAAGCGCACTGCGAGCAGGGAGCCCGGCTGTGCGAGGAAGGCACCCTCCCCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HTSALRAGSPAVRGRHPPLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...GGGAGGGTGCCTTCCTCGCACAGCCGGGCTCCCTGCTCGCAGTGCGCTTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCAACAGGGACACGCTaGGGGGCTGTGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRATGTR*GAVLSL
Trigger: CAAAGACAGCACAGCCCCCCAGCGTGTCCCTGTTGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAADVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGASCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCCCAAGCGGCCCCCTaGGGACCGAGAAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAQAAP*GPRSQS
Trigger: AGACTGGCTTCTCGGTCCCCAGGGGGCCGCTTGGGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCCCGGGACCCTGGCATaGTTAGGCTGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAPGTLA*LGCLCH
Trigger: ATGGCAAAGACAGCCTAACCATGCCAGGGTCCCGGG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGGCCAGAGCCTGGTaGTCAGGAAGCGCGTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRARAW*SGSACN
Trigger: ATTGCACGCGCTTCCTGACCACCAGGCTCTGGCCCT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCAAGGTGTCCCAAGGTaGGCCGACTGGAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGQGVPR*ADWRKG
Trigger: TCCCTTTCTCCAGTCGGCCCACCTTGGGACACCTTG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR TCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCAGCTGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRQLPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCAGCTG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPDQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRDQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTCCACCACTCTTGCCTaGGAGTGTTCCAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRSTTLA*ECSSPE
Trigger: CTCAGGGCTGGAACACTCTCAGGCAAGAGTGGTGGA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTCGGCAGTGTCTCCTaGGAGGAGGGGGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLGSVS*EEGATV
Trigger: CACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGTGGGGTGGGGTGGGTaGGAGGAGACAATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGVGWGG*EETILK
Trigger: CTTTAAGATTGTCTCCTCTCACCCACCCCACCCCAC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGAGGTCTGGCCCCGCTaGGCGGCTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPEVWPR*AASPAP
Trigger: AGGAGCTGGAGAAGCCGCTCAGCGGGGCCAGACCTC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRDWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGADWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAPACRA*TAACTS
Trigger: AGAAGTACATGCTGCTGTGCATGCACGGCACGCCGG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGAGTGCCCAGTGGCCCTaGTCTGGAGACCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRSAQWP*SGDQQP
Trigger: GGGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACT...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGTCCCCCATCACAGAGTaGCCAGTGGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGSPITE*PVALLW
Trigger: CCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGA...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCGGTGAGGGAAGTCACTaGTATGGAGAGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAGEGSH*YGESWC
Trigger: GCACCAGCTCTCTCCATAGCAGTGACTTCCCTCACC...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCACCTTGCCTGGGTaGCCCGGGCCCCTACCCCCT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHATLPG*PGPLPP
Trigger: AGGGGGTAGGGGCCCGGGGCACCCAGGCAAGGTGGC...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCCGGGCCGCAGAGACTaGGGCAGAAGCAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQPGRRD*GRSRSR
Trigger: ACGGCTTCTGCTTCTGCCGCAGTCTCTGCGGCCCGG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGCCGGGCCGCAGAGACTaGGGCAGAAGCAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGPGRRD*GRSRSR
Trigger: ACGGCTTCTGCTTCTGCCGCAGTCTCTGCGGCCCGG...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGACATGGATTTCTGGTaGTGGCGGGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPDMDFW*WRGRAA
Trigger: TGCGGCCCGGCCCCGCCAGCACCAGAAATCCATGTC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGCCGAGCGGTTCCTaGCTGGGAACCTGGACGGTG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRPSGS*LGTWTV
Trigger: CACCGTCCAGGTTCCCAGGCAGGAACCGCTCGGCCT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCTAGAAACGGGAGGTaGGGCGCGCCTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRARNGR*GAPSPP
Trigger: GGGAGGAGAAGGCGCGCCCCACCTCCCGTTTCTAGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000377810.8
ENST00000508192.5
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTAGAAACGGGAGGTaGGGCGCGCCTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPARNGR*GAPSPP
Trigger: GGGAGGAGAAGGCGCGCCCCACCTCCCGTTTCTAGC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000377810.8
ENST00000508192.5
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGCTAGAAACGGGAGGTaGGGCGCGCCTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPARNGR*GAPSPP
Trigger: GGGAGGAGAAGGCGCGCCCCACCTCCCGTTTCTAGC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000377810.8
ENST00000508192.5
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCCGAGCGCTGGACATaGCGCCGGTATCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSERWT*RRYLGG
Trigger: TCCCCCGAGATACCGGCGCCATGTCCAGCGCTCGGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTCCGAGCGCTGGACATaGCGCCGGTATCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSERWT*RRYLGG
Trigger: TCCCCCGAGATACCGGCGCCATGTCCAGCGCTCGGA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAACCTCGTTGTATCTCTaGCCCACCAGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGATSLYL*PTSESW
Trigger: CCAGGACTCGCTGGTGGGCCAGAGATACAACGAGGT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGACCTCGTTGTATCTCTaGCCCACCAGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAATSLYL*PTSESW
Trigger: CCAGGACTCGCTGGTGGGCCAGAGATACAACGAGGT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAALVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPLYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAALYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGTTCGTGGAGGGGGTTaGGGTGGTCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAVRGGG*GGLLPL
Trigger: GAGAGGAAGAAGACCACCCCAACCCCCTCCACGAAC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGTTCGTGGAGGGGGTTaGGGTGGTCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRVRGGG*GGLLPL
Trigger: GAGAGGAAGAAGACCACCCCAACCCCCTCCACGAAC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAALSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTACTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCATGGCAGGACCAGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRMAGPA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCAT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATGGCAGGACCAGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPMAGPA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCAT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAATGGCAGGACCAGCCTaGTCGCTGAAGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPMAGPA*SLKRRC
Trigger: GCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCAT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTCTGGTGGTTTGCTTaGAGGGGAAGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLWWFA*RGRREE
Trigger: CTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGAAGGCCACCTCTGGTaGTTTGCTTGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAEGHLW*FAWRGR
Trigger: CCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTCACAGAGTGCCCAGTaGCCCTGCTCTGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRSQSAQ*PCSGDQ
Trigger: TTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGCAGCCTTCTGCCAGGTaGCCCTCGGCAGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKQPSAR*PSAVSP
Trigger: AGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTG...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGGCCGCAGTAGGAGTGTaGGGCAGGAGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PCCLTQPSARWPSAVSPEAAVGV*GRRAEV
Trigger: AACCTCAGCCCTCCTGCCCCACACTCCTACTGCGGC...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCCAGAAGCAGAAGCCGTaGAGGCCCGGGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPQKQKP*RPGTLA
Trigger: TGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTG...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACAGAAGCAGAAGCCGTaGAGGCCCGGGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPQKQKP*RPGTLA
Trigger: TGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCCCAGAGGCCTTGTTaGGGTGCACGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAQRPC*GARRPT
Trigger: TGTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATCCTGCCTGGGAACCTaGACGGTGTCGCAACCGAAA +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGASCLGT*TVSQPK
Trigger: TTTCGGTTGCGACACCGTCCAGGTTCCCAGGCAGGA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGAGCGGTTCCTGCCTaGGAACCTGGACGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRAVPA*EPGRCR
Trigger: GCGACACCGTCCAGGTTCCCAGGCAGGAACCGCTCG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPDQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGGCCACAGACTACGGGTaGATTCCGGAAACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRATDYG*IPETAE
Trigger: TTCGGCTGTTTCCGGAATTCACCCGTAGTCTGTGGC...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377810.8
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCACCACCTCCTCAGTaGAAAGTAGCTAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRPPPPQ*KVAKQP
Trigger: TGGCTGCTTAGCTACTTTTCACTGAGGAGGTGGTGG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR GCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCGCCGCCGGACCTGCTaGTCCCAACATGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHRRRTC*SQHGRH
Trigger: GTGGCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp GCATGGAAGGTGCTTCGGCTGGACACACCCCGGGGGAAGTTAGTTCGGTCTGGGGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: AWKVLRLDTPRGKLVRSGAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...CCCAGACCGAACTAACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCCATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGGAGGCGGAGCCTTGTaGCGGCCCTCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHGGGAL*RPSSLS
Trigger: GCTGAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCC...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GCATGGAAGGTGCTTCGGCTGGACACACCCCGGGGGAAGTTAGTTCGGTCTGGGAGTGCCCAGTGGCCCTaGTCTGGAGACCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: AWKVLRLDTPRGKLVRSGSAQWP*SGDQQP
Trigger: GGGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACT...CCCAGACCGAACTAACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCCATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGAGGGCGAGGGGGCTGTaGTTTCAGACAAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGERARGL*FQTKAP
Trigger: GGGAGCCTTTGTCTGAAAGCACAGCCCCCTCGCCCT...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGACATGGATTTCTGGTaGTGGCGGGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPDMDFW*WRGRAA
Trigger: TGCGGCCCGGCCCCGCCAGCACCAGAAATCCATGTC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGATTTATCCAGATGCTaGTGGTGGCAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRDLSRC*WWQGCW
Trigger: CCAGCACCCCTGCCACCAGCAGCATCTGGATAAATC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCTGCTGCTCCCAACATaGCCGCCACCACCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHLLLPT*PPPPPA
Trigger: GGCCGGCGGTGGTGGCGGCCATGTTGGGAGCAGCAG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377810.8
CDS-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTCCGAGCGCTGGACATaGCGCCGGTATCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLSERWT*RRYLGG
Trigger: TCCCCCGAGATACCGGCGCCATGTCCAGCGCTCGGA...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377810.8
ENST00000402010.8
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAATADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAALYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTAAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRRGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPCFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAACFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRCFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGCACGAAGTCCTCGTaGCCCGGCGTGCCGTGCATG +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLCTKSS*PGVPCM
Trigger: CATGCACGGCACGCCGGGCCACGAGGACTTCGTGCA...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQRRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCCACAGTTACTCTCCGTaGGGGGCAGCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPHSYSP*GAAQRP
Trigger: AGGCCTCTGGGCTGCCCCCCACGGAGAGTAACTGTG...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCACAGTTACTCTCCGTaGGGGGCAGCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPHSYSP*GAAQRP
Trigger: AGGCCTCTGGGCTGCCCCCCACGGAGAGTAACTGTG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCACAGTTACTCTCCGTaGGGGGCAGCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRHSYSP*GAAQRP
Trigger: AGGCCTCTGGGCTGCCCCCCACGGAGAGTAACTGTG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTGAAGGCCACCTCTGGTaGTTTGCTTGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPEGHLW*FAWRGR
Trigger: CCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTC...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCTGTCCCCCACCCTGTaGAGGGCAGACGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHLSPTL*RADAPG
Trigger: GCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTGAGGGTAGCAAGCTaGGAGTCGCTTAGCCTATCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPLRVAS*ESLSLS
Trigger: AGATAGGCTAAGCGACTCCCAGCTTGCTACCCTCAG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGCACGGAGGCCGACATaGATTTCTGGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPARRPT*ISGAGG
Trigger: CCCGCCAGCACCAGAAATCCATGTCGGCCTCCGTGC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCACGGAGGCCGACATaGATTTCTGGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRARRPT*ISGAGG
Trigger: CCCGCCAGCACCAGAAATCCATGTCGGCCTCCGTGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GCATGGAAGGTGCTTCGGCTGGACACACCCCGGGGGAAGTTAGTTCGGTCTGGGGCACGGAGGCCGACATaGATTTCTGGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: AWKVLRLDTPRGKLVRSGARRPT*ISGAGG
Trigger: CCCGCCAGCACCAGAAATCCATGTCGGCCTCCGTGC...CCCAGACCGAACTAACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCCATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCAAGGGCCAGAGCCTaGTGGTCAGGAAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSRARA*WSGSAC
Trigger: GCACGCGCTTCCTGACCACCAGGCTCTGGCCCTTGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGGGACAAAGCCCCGCTaGCTTCTCAAGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQGTKPR*LLKGQS
Trigger: GCTCTGGCCCTTGAGAAGCCAGCGGGGCTTTGTCCC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCCAAGGTGGGCCGACTaGAGAAAGGGAAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPPRWAD*RKGKGL
Trigger: TAGTCCTTTTCCCTTTCTCCAGTCGGCCCACCTTGG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGGTTCCTTGGTTGGGTaGGTGGGGAAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEGSLVG*VGKRSG
Trigger: GCCAGACCTCTTCCCCACCCACCCAACCAAGGAACC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR TCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGTCCACCACTCTTGCCTaGGAGTGTTCCAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PCCLTQPSARWPSAVSPESTTLA*ECSSPE
Trigger: CTCAGGGCTGGAACACTCTCAGGCAAGAGTGGTGGA...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAAAGGGAGGCTTCCCTaGGACAGTCTCCCCTTACTT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRKGRLP*DSLPLL
Trigger: AAGTAAGGGGAGACTGTCTCAGGGAAGCCTCCCTTT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: PCCLTQPSARWPSAVSPEQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGASCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHARTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATGTCGTTGCCGCCACTaGCCACCACGTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPCRCRH*PPREVF
Trigger: GAAGACCTCACGTGGTGGGCAGTGGCGGCAACGACA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361128.9
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGTCGTTGCCGCCACTaGCCACCACGTGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQCRCRH*PPREVF
Trigger: GAAGACCTCACGTGGTGGGCAGTGGCGGCAACGACA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361128.9
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGCCACCTCTGGTGGTTTaGTTGGAGGGGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEPPLVV*LEGKEG
Trigger: TCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGG...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCACCCACTGCAGGGCTaGGCAGCACCCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPHPLQG*AAPPPP
Trigger: AGGGGGCGGGGGTGCTGCGCAGCCCTGCAGTGGGTG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGTCCCCCATCACAGAGTaGCCAGTGGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQSPITE*PVALLW
Trigger: CCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGA...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTCCCCCATCACAGAGTaGCCAGTGGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPSPITE*PVALLW
Trigger: CCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCAGGGCGAGGGGGCTGTaGTTTCAGACAAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPRARGL*FQTKAP
Trigger: GGGAGCCTTTGTCTGAAAGCACAGCCCCCTCGCCCT...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGAGGGCGAGGGGGCTGTaGTTTCAGACAAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQRARGL*FQTKAP
Trigger: GGGAGCCTTTGTCTGAAAGCACAGCCCCCTCGCCCT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGACGCTCCCGGCCCTaGTGCCTAACTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRRSRP*CLTQPS
Trigger: AGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTGGTTAGGCTGTCTTTaGCATTCTGGATGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPWLGCL*HSGWRP
Trigger: AGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTGGTTAGGCTGTCTTTaGCATTCTGGATGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAWLGCL*HSGWRP
Trigger: AGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGAGGCCTTGTTGGGGTaGACGGAGGCCGACATGGAT +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTAEALLG*TEADMD
Trigger: ATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCTC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGTGCACACAAGCGCACTaGGAGCAGGGAGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RRERGLASRNSSFSLSLPCTQAH*EQGARL
Trigger: CAGCCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCA...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAATADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCTGCGCTGTACCTTGTaGGATGGGGATGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPLRCTL*DGDGAL
Trigger: CAGCGCCCCATCCCCATCCCACAAGGTACAGCGCAG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPRGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHARGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGCAACAGGGACACGCTaGGGGGCTGTGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPATGTR*GAVLSL
Trigger: CAAAGACAGCACAGCCCCCCAGCGTGTCCCTGTTGC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCAACAGGGACACGCTaGGGGGCTGTGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPATGTR*GAVLSL
Trigger: CAAAGACAGCACAGCCCCCCAGCGTGTCCCTGTTGC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGGAGGGAGCGGGGCTTaGCCTCCCGAAATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGGGSGA*PPEILP
Trigger: AGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCC...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTAPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCATGGAAGGTGCTTCGGCTGGACACACCCCGGGGGAAGTTAGTTCGGTCTGGGTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AWKVLRLDTPRGKLVRSGSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...CCCAGACCGAACTAACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTCATGCAGCTCGCTCTaGCAGCTGTTCGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSCSSL*QLFASS
Trigger: GCTGGACGCGAACAGCTGCCAGAGCGAGCTGCATGA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPRRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGGAAGGCCACCTCTGGTaGTTTGCTTGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGEGHLW*FAWRGR
Trigger: CCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTC...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGTCACAGAGTGCCCAGTaGCCCTGCTCTGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRSQSAQ*PCSGDQ
Trigger: TTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGA...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCTGAGGGTAGCAAGCTaGGAGTCGCTTAGCCTATCT +
Preference number: 4 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRLRVAS*ESLSLS
Trigger: AGATAGGCTAAGCGACTCCCAGCTTGCTACCCTCAG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCGCCGCAGTAGGAGTGTaGGGCAGGAGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLAAVGV*GRRAEV
Trigger: AACCTCAGCCCTCCTGCCCCACACTCCTACTGCGGC...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGGCCCAGAGGCCTTGTTaGGGTGCACGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: RRERGLASRNSSFSLSLPAQRPC*GARRPT
Trigger: TGTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGC...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGAGGGCCAGAGCCTGGTaGTCAGGAAGCGCGTGCAAT +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGRARAW*SGSACN
Trigger: ATTGCACGCGCTTCCTGACCACCAGGCTCTGGCCCT...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGAGAGACTGGGTTTaGCAAGGAGAGCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAQRDWV*QGEQQG
Trigger: TCCCTGTTGCTCTCCTTGCCAAACCCAGTCTCTCTG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGCAGAGAGACTGGGTTTaGCAAGGAGAGCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKQRDWV*QGEQQG
Trigger: TCCCTGTTGCTCTCCTTGCCAAACCCAGTCTCTCTG...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGAAGAAGAAATTGTTaGGGCAAGGGGGTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAGRRNC*GKGVGW
Trigger: CCACCCTACCCCCTTGCCCCAACAATTTCTTCTTCC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR TCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCATCAGCAGAGGTGGCTaGGTTGCGGCCCCGAATCAT +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHAISRGG*VAAPNH
Trigger: ATGATTCGGGGCCGCAACTCAGCCACCTCTGCTGAT...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PCCLTQPSARWPSAVSPEWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGAGATGGCACAGACTTTaGGGGAACACACGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKRWHRL*GNTRPH
Trigger: GTGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCT...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCGCCGCCGGACCTGCTaGTCCCAACATGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPRRRTC*SQHGRH
Trigger: GTGGCGGCCATGTTGGGAGCAGCAGGTCCGGCGGCG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQDWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHADWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGATTGGCCGACACGCTaGGCTGTACCTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPDWPTR*AVPCGM
Trigger: CATCCCACAAGGTACAGCGCAGCGTGTCGGCCAATC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPPACRA*TAACTS
Trigger: AGAAGTACATGCTGCTGTGCATGCACGGCACGCCGG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCTAACTCAGCCTTCTaGCAGGTGGCCCTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQPNSAF*QVALGS
Trigger: ACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGG...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTGGTTAGGCTGTCTTTaGCATTCTGGATGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAWLGCL*HSGWRP
Trigger: AGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTTGTGGGATGGGGATaGGGCGCTGCTATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLVGWG*GAAIGQ
Trigger: CTGACCAATAGCAGCGCCCCATCCCCATCCCACAAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGTTCGTGGAGGGGGTTaGGGTGGTCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRVRGGG*GGLLPL
Trigger: GAGAGGAAGAAGACCACCCCAACCCCCTCCACGAAC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCAGAGGACGCTGTTCGTaGAGGGGGTTGGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPRGRCS*RGLGWS
Trigger: AGACCACCCCAACCCCCTCCACGAACAGCGTCCTCT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQRPGRG*PAPKVG
Trigger: CCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCT...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGCAACAGGGACACGCTaGGGGGCTGTGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPATGTR*GAVLSL
Trigger: CAAAGACAGCACAGCCCCCCAGCGTGTCCCTGTTGC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RRERGLASRNSSFSLSLPGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCCTCTGGTGGTTTGCTTaGAGGGGAAGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHALWWFA*RGRREE
Trigger: CTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAG...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGCTCTGGTGGTTTGCTTaGAGGGGAAGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARLWWFA*RGRREE
Trigger: CTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAG...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGTCTACCCGGGAGGGGTaGGAGAAGATGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGSTREG*EKMAQT
Trigger: AGTCTGTGCCATCTTCTCCCACCCCTCCCGGGTAGA...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGGGAAGTCACTGCTATaGAGAGAGCTGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEGKSLL*RELVPR
Trigger: TCTGGGCACCAGCTCTCTCCATAGCAGTGACTTCCC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCCCCGGGACCCTGGCATaGTTAGGCTGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTAPGTLA*LGCLCH
Trigger: ATGGCAAAGACAGCCTAACCATGCCAGGGTCCCGGG...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCCCGGGACCCTGGCATaGTTAGGCTGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQPGTLA*LGCLCH
Trigger: ATGGCAAAGACAGCCTAACCATGCCAGGGTCCCGGG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCCTGCCTGGGAACCTaGACGGTGTCGCAACCGAAA +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSCLGT*TVSQPK
Trigger: TTTCGGTTGCGACACCGTCCAGGTTCCCAGGCAGGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCCAAGGTGTCCCAAGGTaGGCCGACTGGAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPQGVPR*ADWRKG
Trigger: TCCCTTTCTCCAGTCGGCCCACCTTGGGACACCTTG...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCCCAGCACACTTGCCTaGGCCGCGGCACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHPSTLA*AAAPHS
Trigger: ACTGTGAGGTGCCGCGGCCCAGGCAAGTGTGCTGGG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGAGACAGGCCATATCTaGAGAAAACAGCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGETGHI*RKQPRG
Trigger: TCCTCTAGGCTGTTTTCTCCAGATATGGCCTGTCTC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCTTCAGCTTGGTATTTaGTCCCCGAGGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRLQLGI*SPRPAE
Trigger: CTCTGCAGGCCTCGGGGACCAAATACCAAGCTGAAG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAALEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCCACTGCCCACCACGTaGGGTCTGCGTACAAACTTG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPPLPTT*GLRTNL
Trigger: CAAGTTTGTACGCAGACCTCACGTGGTGGGCAGTGG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350490.11
CDS-3UTR TCA 90 bp TGGGGTAGAATGGCCGTTGCCCTAGAATGTCCCAGCTCCCCGCACTTTGGAAGACCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: WGRMAVALECPSSPHFGRPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...TCTTCCAAAGTGCGGGGAGCTGGGACATTCTAGGGCAACGGCCATTCTACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCAGATGGCACAGACTTTaGGGGAACACACGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHARWHRL*GNTRPH
Trigger: GTGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCT...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCTCGGCTTAATCGCTaGGCCTGGCCTGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPARLNR*AWPGSG
Trigger: CCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGCCACCACCTCCTCAGTaGAAAGTAGCTAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKPPPPQ*KVAKQP
Trigger: TGGCTGCTTAGCTACTTTTCACTGAGGAGGTGGTGG...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGGATCCCAACACTTGTaGCCAAAACCTGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEGSQHL*PKPGVR
Trigger: TCTCACCCCAGGTTTTGGTCACAAGTGTTGGGATCC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGAAGGGAGACCCCTaGGTAAGGGTGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQVKGDP*VRVQRS
Trigger: AGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCAC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGCTCCGCCTACTCTCTaGCGCCGCAGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSAPPTL*RRSRPP
Trigger: AGGCGGCCGGCTGCGGCGGCAGAGAGTAGGCGGAGC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
CDS-3UTR GCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCCAGAGGTGGCTGAGTTaGGGCCCCGAATCATGTTGG +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLQRWLS*GPESCW
Trigger: CCAACATGATTCGGGGCCGCAACTCAGCCACCTCTG...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTAMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPPACRA*TAACTS
Trigger: AGAAGTACATGCTGCTGTGCATGCACGGCACGCCGG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp ACTCCACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TPREAEGAGLGLPKFFLFTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...GAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPSPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAASPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp CACACAAGCGCACTGCGAGCAGGGAGCCCGGCTGTGCGAGGAAGGCACCCTCCCTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: HTSALRAGSPAVRGRHPPSPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...GGGAGGGTGCCTTCCTCGCACAGCCGGGCTCCCTGCTCGCAGTGCGCTTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVSPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGGTCAGGAAGCGCGTaGAATTCCAGGACAGCACAC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQWSGSA*NSRTAH
Trigger: GTGTGCTGTCCTGGAATTGCACGCGCTTCCTGACCA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGCTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGACCTCGTTGTATCTCTaGCCCACCAGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQTSLYL*PTSESW
Trigger: CCAGGACTCGCTGGTGGGCCAGAGATACAACGAGGT...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPLYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTGGAGGGGGTTGGGGTaGTCTTCTTCCTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPWRGLG*SSSSPD
Trigger: GTCTGGAGAGGAAGAAGACCACCCCAACCCCCTCCA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGTTCGTGGAGGGGGTTaGGGTGGTCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPVRGGG*GGLLPL
Trigger: GAGAGGAAGAAGACCACCCCAACCCCCTCCACGAAC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRCFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp ACTCCACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPREAEGAGLGLPKFFLFLCHSG*RPGRGW
Trigger: CCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAG...GAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPLSLPF*MEAWPR
Trigger: CCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp ACTCCACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCGCAACAGGGACACGCTaGGGGGCTGTGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TPREAEGAGLGLPKFFLFATGTR*GAVLSL
Trigger: CAAAGACAGCACAGCCCCCCAGCGTGTCCCTGTTGC...GAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCACAGTTACTCTCCGTaGGGGGCAGCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHHSYSP*GAAQRP
Trigger: AGGCCTCTGGGCTGCCCCCCACGGAGAGTAACTGTG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGTCTACCCGGGAGGGGTaGGAGAAGATGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQSTREG*EKMAQT
Trigger: AGTCTGTGCCATCTTCTCCCACCCCTCCCGGGTAGA...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGGGAAGTCACTGCTATaGAGAGAGCTGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGGKSLL*RELVPR
Trigger: TCTGGGCACCAGCTCTCTCCATAGCAGTGACTTCCC...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGGGAAGTCACTGCTATaGAGAGAGCTGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQGKSLL*RELVPR
Trigger: TCTGGGCACCAGCTCTCTCCATAGCAGTGACTTCCC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCCAGAAGCAGAAGCCGTaGAGGCCCGGGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAQKQKP*RPGTLA
Trigger: TGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTG...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCCCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KGSPITECPVALLWRPTAPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRSIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAASIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCATTGGTCAGATCAGCTaGAGGCCGGGGTTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPIGQIS*RPGFQG
Trigger: ACCCTGAAACCCCGGCCTTCAGCTGATCTGACCAAT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGTCTTCTGGCAAACCTaGAAGACAGATTTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAVFWQT*KTDFCV
Trigger: TACGCAGAAATCTGTCTTTCAGGTTTGCCAGAAGAC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361128.9
ENST00000679216.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGTCTTCTGGCAAACCTaGAAGACAGATTTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRVFWQT*KTDFCV
Trigger: TACGCAGAAATCTGTCTTTCAGGTTTGCCAGAAGAC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361128.9
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCCCACTGCCCACCACGTaGGGTCTGAGCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAPLPTT*GLSVST
Trigger: AGTGGAGACGCTCAGACCTCACGTGGTGGGCAGTGG...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGTCCTTCTGGCAAACCTaGAAGACAGATTTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKSFWQT*KTDFCV
Trigger: TACGCAGAAATCTGTCTTTCAGGTTTGCCAGAAGGA...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAACCTTCTGGCAAACCTaGAAGACAGATTTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGATFWQT*KTDFCV
Trigger: TACGCAGAAATCTGTCTTTCAGGTTTGCCAGAAGGT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGRPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GGQTLPALLPNSAFCQVARPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAARPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPSCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPSCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGCCCAGCATGGAAGGTaGTTCGGCTGGACACACCCC +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAAQHGR*FGWTHP
Trigger: GGGGTGTGTCCAGCCGAAGCACCTTCCATGCTGGGC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPPFLCR*RHCPPR
Trigger: ACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp ACTCCACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCCCGGCGTGCCGTGCATaGACAGCAGCATGTACTTCT +
Preference number: 4 (lower is better)
Translates to: TPREAEGAGLGLPKFFLFPACRA*TAACTS
Trigger: AGAAGTACATGCTGCTGTGCATGCACGGCACGCCGG...GAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGGTGAGGGAAGTCACTaGTATGGAGAGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPGEGSH*YGESWC
Trigger: GCACCAGCTCTCTCCATAGCAGTGACTTCCCTCACC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGGCAGCAGCCAGTCATaGAGTCAACAGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVGSSQS*SQQLGG
Trigger: CCCACCCAGCTGTTGACTGCATGACTGGCTGCTGCC...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGALSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGCTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCATGGGGCGCTGCTATTaGTCAGATCAGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPMGRCY*SDQLKA
Trigger: GGCCTTCAGCTGATCTGACCAATAGCAGCGCCCCAT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHACFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQCFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHAGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGGAAGGTGCTTCGGCTaGACACACCCCGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAGRCFG*THPGGS
Trigger: ACTTCCCCCGGGGTGTGTCCAGCCGAAGCACCTTCC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGTGAATGTGGGGTGCTaGAGAACAATCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPVNVGC*RTISHP
Trigger: GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCAC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AAGACACAACCAACACAGGGGTGCACACAAGCGCACTGCGAGCAGGGAGCCCGGTGTTTTGCTACGGCTTaGGGTAGAATGGCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: KTQPTQGCTQAHCEQGARCFATA*GRMAVA
Trigger: GGCAACGGCCATTCTACCCCAAGCCGTAGCAAAACA...CCGGGCTCCCTGCTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCCCTTGCCAATGGTCTTaGGGAGCCGGTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLPCQWS*GAGSFQ
Trigger: TTGGAAACTACCGGCTCCTCAAGACCATTGGCAAGG...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRSIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGASIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPALETNSPSGPLGTEKSIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR TCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCCATGTAAGAGAAAACTaGGAAGGGCCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLHVREN*EGPGRG
Trigger: TCCCCTCCCTGGCCCTTCTCAGTTTTCTCTTACATG...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAALFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPRSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GETHQSIAAVSPRWGGAARSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCAGGCACCTTGGCTGTaGTGCTGGCTTTCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPQAPWL*CWLSAL
Trigger: CAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGCCTG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPSCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCCLTQPSARWPSAVSPEKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGCGCACCTGTCGGAGCTaGCCAGCATGGAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQRTCRS*PAWKVL
Trigger: AAGCACCTTCCATGCTGGGCAGCTCCGACAGGTGCG...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCCACCTCTGGTGGTTTaGTTGGAGGGGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHPPLVV*LEGKEG
Trigger: TCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCAGACGCTCCCGGCCCTaGTGCCTAACTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNARRSRP*CLTQPS
Trigger: AGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCT...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTGCCGTGGTCAGGAAGCGCGTaGAATTCCAGGACAGCACAC +
Preference number: 4 (lower is better)
Translates to: RRERGLASRNSSFSLSLPWSGSA*NSRTAH
Trigger: GTGTGCTGTCCTGGAATTGCACGCGCTTCCTGACCA...CGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR GCA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGGCTGCCAGGAGGGGGTaGTGTGCTCCATTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: HVKRRERGLASRNSSFSLAARRG*CAPFVR
Trigger: TCTCACAAATGGAGCACAGCACCCCCTCCTGGCAGC...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCGCTGCTTGGGATTaGCCGACACGCTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPAAAWD*PTRCAV
Trigger: TACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGTTCGTGGAGGGGGTTaGGGTGGTCTTCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHVRGGG*GGLLPL
Trigger: GAGAGGAAGAAGACCACCCCAACCCCCTCCACGAAC...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTTCGATTTGTGCTGGTaGAGAGGACGCTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: AVLSDKGSPITECPVALLFDLCW*RGRCSW
Trigger: CCACGAACAGCGTCCTCTCCACCAGCACAAATCGAA...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTGCTTCGATTTGTGCTaGTGGAGAGGACGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPCFDLC*WRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPGPLQK*GIPASI
Trigger: AATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCTCTGGTGGTTTGCTTaGAGGGGAAGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHLWWFA*RGRREE
Trigger: CTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGCAGAGGGTACAGTGTaGAGGGAGGCGGAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAAEGTV*REAEPC
Trigger: ACAAGGCTCCGCCTCCCTCCACACTGTACCCTCTGC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACTCTACCCGGGAGGGGTaGGAGAAGATGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHSTREG*EKMAQT
Trigger: AGTCTGTGCCATCTTCTCCCACCCCTCCCGGGTAGA...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPSIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGACCAGCCTGGTCGCTaGAGCGCCGCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSDQPGR*SAAAWD
Trigger: ATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR TCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCTCGGCAGTGTCTCCTaGGAGGAGGGGGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSLGSVS*EEGATV
Trigger: CACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCAGAGGAGAAGAGGCTTaGTTTATCCAGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRRGEEA*FIQMLL
Trigger: CAGCAGCATCTGGATAAATCAAGCCTCTTCTCCTCT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGALFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AGETHQSIAAVSPRWGGARSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPRPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCACCTTGGCTGTGCTaGTGGCTTTCCGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPAPWLC*WLSALT
Trigger: AGTCAGGGCGGAAAGCCAGCAGCACAGCCAAGGTGC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp TGCTCCATTTGTGAGACAAAAGCTCCTAAGGTCTGGGGGAGCCAGACTGAAACCTGGCCCGGCGTGCCGTaGATGCACAGCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: CSICETKAPKVWGSQTETWPGVP*MHSSMY
Trigger: GTACATGCTGCTGTGCATGCACGGCACGCCGGGCCA...GGTTTCAGTCTGGCTCCCCCAGACCTTAGGAGCTTTTGTCTCACAAATGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTACACCAATCCATCGCTaGAGTCTCGCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPTPIHR*SLAQVG
Trigger: CCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGGTGTCTCCAAAGTCCTaGGATCCCATAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQVSPKS*DPIGHG
Trigger: CCCGTGGCCTATGGGATCGCAGGACTTTGGAGACAC...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTCAGGGAGCCCGGCTGTaGGAGGAAGGCACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELQGARL*EEGTLP
Trigger: AGGGAGGGTGCCTTCCTCGCACAGCCGGGCTCCCTG...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGCAACCAACACAGGGGTaGACACAAGCGCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQQPTQG*TQAHCE
Trigger: CTCGCAGTGCGCTTGTGTGCACCCCTGTGTTGGTTG...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCAAGGTGTCCCAAGGTaGGCTGCTCCGTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPQGVPR*AAPCPS
Trigger: AGAGGGACACGGAGCAGCCCACCTTGGGACACCTTG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGATGTTGTGGGCGGATaGGGAGGCAACAGGGACACG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPDVVGG*GGNRDT
Trigger: CGTGTCCCTGTTGCCTCCCCATCCGCCCACAACATC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCCCGCATCATCTCGTTaGGCTCCATGGAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPPASSR*APWSSW
Trigger: CCACGAGCTCCATGGAGCCCAACGAGATGATGCGGG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCTCACAGAGTGCCCAGTaGCCCTGCTCTGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNASQSAQ*PCSGDQ
Trigger: TTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGA...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCCCCGGGACCCTGGCATaGTTAGGCTGTCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAPGTLA*LGCLCH
Trigger: ATGGCAAAGACAGCCTAACCATGCCAGGGTCCCGGG...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGCCTTGGTCTTCAGCTTaGTATTTGGTCCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: HVKRRERGLASRNSSFSLPWSSA*YLVPEA
Trigger: GGCCTCGGGGACCAAATACCAAGCTGAAGACCAAGG...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CAA 72 bp GACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTaGGTCTTCAGCTTGGTATTTGGTCCCCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DSLGEQALLTWP*VFSLVFGPRGL
Trigger: CAGGCCTCGGGGACCAAATACCAAGCTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGCCGGGGTTTCAGGGTaGTGGTGTCGCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSAGVSG*WCRLPA
Trigger: AGCTGGAAGGCGACACCATCACCCTGAAACCCCGGC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTCCTTCTGGCAAACCTaGAAGACAGATTTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSFWQT*KTDFCV
Trigger: TACGCAGAAATCTGTCTTTCAGGTTTGCCAGAAGGA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCGGGGCTGTGCTGTTCTaGGAGGGAGAACTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNAGAVLF*EGELEK
Trigger: CTTTTCCAGTTCTCCCTCTCAGAACAGCACAGCCCC...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR TCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTCAGTCTCCCCTTACTTaGGGACAGGCGTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCQSPLT*GQALTV
Trigger: CACAGTTAACGCCTGTCCTCAAGTAAGGGGAGACTG...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGCATAGCGCATGCACATaGCAAGGGAAAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HVKRRERGLASRNSSFSLHSACT*QGKGQE
Trigger: TTCCTGCCCTTTCCCTTGTCATGTGCATGCGCTATG...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSSLKRR*LGLADT
Trigger: CGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGA...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: KLRDAVATTSQAPQTAHASPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCTCCACTCGGTCTTTaGTTTCAGGTTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSPLGL*FQVHSG
Trigger: ACCTGAATGAACCTGAAAGCAAAGACCGAGTGGAGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCAGTGCCCAGTGGCCCTaGTCTGGAGACCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSSAQWP*SGDQQP
Trigger: GGGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCCTTGATTTATCCAGATaGTGCTGGTGGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVLDLSR*CWWQGC
Trigger: GCACCCCTGCCACCAGCAGCATCTGGATAAATCAAG...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCGCCGCCCCCGCTCCTaGCAGCCTGTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSRRPRS*QPVKAS
Trigger: TGAAGCTTTAACAGGCTGCCAGGAGCGGGGGCGGCG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGAAGGCCACCTCTGGTaGTTTGCTTGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPEGHLW*FAWRGR
Trigger: CCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCTGAGGGTAGCAAGCTaGGAGTCGCTTAGCCTATCT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHLRVAS*ESLSLS
Trigger: AGATAGGCTAAGCGACTCCCAGCTTGCTACCCTCAG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGCCAAGGTGGGCCGACTaGAGAAAGGGAAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: HVKRRERGLASRNSSFSLPRWAD*RKGKGL
Trigger: TAGTCCTTTTCCCTTTCTCCAGTCGGCCCACCTTGG...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTCTGAGAGGGAGAACTaGAAAAGAGGGGCATTAATG +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSEREN*KRGALM
Trigger: CATTAATGCCCCTCTTTTCCAGTTCTCCCTCTCAGA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTCCTGCCTGTTTGTACTaGGGGCACGGAGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELPACLY*GHGGQA
Trigger: GGCCTGCCCTCCGTGCCCCCAGTACAAACAGGCAGG...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTCTCCTGGCTGGAAGATaGGTGTCTGGAGCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCLLAGR*VSGARK
Trigger: TTTCCTAGCTCCAGACACCCATCTTCCAGCCAGGAG...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
3UTR CAA 72 bp TTAAAGGGAGGCTTCCCTGAGACAGTCTCCCCTTACTaGAGGACAGGCGTTAACTGTGGGCCCAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LKGGFPETVSPY*RTGVNCGPKEG
Trigger: GCCTTCCTTGGGCCCACAGTTAACGCCTGTCCTCAAGTAAGGGGAGACTGTCTCAGGGAAGCCTCCCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPLEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR TCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTAGATGGCACAGACTTTaGGGGAACACACGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPRWHRL*GNTRPH
Trigger: GTGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGGGCAGGCCTTGTGCTaGTGCCCAATCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSGQALC*CPIRGS
Trigger: ACTGCCTCTGATTGGGCATCAGCACAAGGCCTGCCC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTATGGGGATGGGGCGCTaGTATTGGTCAGATCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPMGMGR*YWSDQL
Trigger: CAGCTGATCTGACCAATAGCAGCGCCCCATCCCCAT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPRPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CTGAGCAGACAGCCTTGGGGAACAAGCACTCTTAACCTGGCCCTTGGTCTTCAGTCCTGCTTCGATTTGTaGTGGTGGAGAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: LSRQPWGTSTLNLALGLQSCFDL*WWRGRC
Trigger: ACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGA...CTGAAGACCAAGGGCCAGGTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTCAGGAGGGGGTGCTGTaGTCCATTTGTGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCQEGVL*SICETK
Trigger: TTTTGTCTCACAAATGGAGCACAGCACCCCCTCCTG...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AGGGGAGTTAGTGATGGAGGCAGGACACAGGACACAGACACACACACACACACATTGGTCCCCGAGGCCTaGAGAGAGGATGAGCATAAG +
Preference number: 4 (lower is better)
Translates to: RGVSDGGRTQDTDTHTHTLVPEA*REDEHK
Trigger: CTTATGCTCATCCTCTCTGCAGGCCTCGGGGACCAA...TGTGTGTGTGTGTGTGTCTGTGTCCTGTGTCCTGCCTCCATCACTAACTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCTATCTGGCGGAATTTaGCTCGAGCCTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPLSGGI*LEPLFL
Trigger: AAGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCTGTACCTTGTGGGATaGGGATGGGGCGCTGCTATT +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPLYLVG*GWGAAI
Trigger: AATAGCAGCGCCCCATCCCCATCCCACAAGGTACAG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CCA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCAAAGCTTCAGCTCGTTaGCTATTTTGGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: GLGEILCATAVPRGSPAPKASAR*LFWRQC
Trigger: ACATTGCCTCCAAAATAGCCAACGAGCTGAAGCTTT...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGGGGAAGGCCACCTCTaGTGGTTTGCTTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSGEGHL*WFAWRG
Trigger: TCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCCC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGGGTGATGAAGAGGGGTaGAGTCATCATAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: LTQPSARWPSAVSPERRGGDEEG*SHHKSK
Trigger: TTTTGATTTATGATGACTCCACCCCTCTTCATCACC...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGGGTGATGAAGAGGGGTaGAGTCATCATAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRGDEEG*SHHKSK
Trigger: TTTTGATTTATGATGACTCCACCCCTCTTCATCACC...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTGCCAGACTGAAACCTTaGGGCCCCAGGGTCCCCGTA +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELARLKP*GPRVPV
Trigger: TACGGGGACCCTGGGGCCCCAAGGTTTCAGTCTGGC...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTTTCATTCAGGTTCCTTaGTTGGGTGGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCFIQVP*LGGWGR
Trigger: TCTTCCCCACCCACCCAACCAAGGAACCTGAATGAA...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCATCAGCAGAGGTGGCTaGGTTGCGGCCCCGAATCAT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSISRGG*VAAPNH
Trigger: ATGATTCGGGGCCGCAACTCAGCCACCTCTGCTGAT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR TCA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPSIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRRSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR GCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCKVGNS*FDLCWW
Trigger: CCACCAGCACAAATCGAAGCAGGAATTCCCCACTTT...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCACCTCTGGTGGTTTaGTTGGAGGGGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSPPLVV*LEGKEG
Trigger: TCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR GCA 90 bp ATCTCCTGTTGTTTTGCTACGGCTTGGGGTAGAATGGCCGTTGCCCTAGAATGTCCACCTCTGGTGGTTTaGTTGGAGGGGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ISCCFATAWGRMAVALECPPLVV*LEGKEG
Trigger: TCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGG...ACATTCTAGGGCAACGGCCATTCTACCCCAAGCCGTAGCAAAACAACAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTACAGCAGACACTATCTaGCGGAATTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPTADTI*RNLARA
Trigger: GGCTCGAGCCAAATTCCGCCAGATAGTGTCTGCTGT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGGTGATGAAGAGGGGTaGAGTCATCATAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRGDEEG*SHHKSK
Trigger: TTTTGATTTATGATGACTCCACCCCTCTTCATCACC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCAGCAGGACCCCCAAGTaGGAAGAAGAAATTGTTGGG +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNASRTPK*EEEIVG
Trigger: CCCAACAATTTCTTCTTCCCACTTGGGGGTCCTGCT...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR GCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTTGGCACCAATGTGCCTaGCAGGCATCCCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELWHQCA*QASQSQ
Trigger: TTGGGACTGGGATGCCTGGCAGGCACATTGGTGCCA...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTACTTGGTTAAGCAGATaGAGGAGAGTAAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCTWLSR*RRVRAR
Trigger: TCTGGCTCTTACTCTCCTCCATCTGCTTAACCAAGT...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTCTGAGTGGGCCAATGTaGCCTCTTAGCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELLSGPM*PLSPAC
Trigger: ACAGGCAGGGCTAAGAGGCCACATTGGCCCACTCAG...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCTGAGCAGACAGCCTTaGGGAACAAGCACTCTTAAC +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPLSRQP*GTSTLN
Trigger: GTTAAGAGTGCTTGTTCCCCAAGGCTGTCTGCTCAG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR TCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCCTGGAGGAGTTCAGTTaGGTCTTGTCAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNALEEFS*VLSMIF
Trigger: GAAGATCATTGACAAGACTCAACTGAACTCCTCCAG...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTTGGAGGCAATGTTTTTaGAGGCCATGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELWRQCF*RPWRCP
Trigger: CGGGCACCTCCATGGCCTTCAAAAACATTGCCTCCA...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCTTTCCAATGTGGGGCTaGTCATCAGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSFPMWG*SSAEVA
Trigger: AGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAA...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CCA 90 bp CCAGGAGACAACAAACAAGATACCATCCCAGATGCACTTGTAACCCTGGAGCTTTTCCTCCATCAGCTGTaGCACCAATGTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGDNKQDTIPDALVTLELFLHQL*HQCACQ
Trigger: CTGGCAGGCACATTGGTGCCACAGCTGATGGAGGAA...AAGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCTTGTTTGTTGTCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACCTTTTTCTTTCATCCTaGCATGAGCCACTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHLFLSS*HEPLGN
Trigger: ATTACCTAGTGGCTCATGGCAGGATGAAAGAAAAAG...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR GCA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCCGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVRSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR GCA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: AQTLREHTSPQQLVEGNARPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR TCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTTCCATCGATCTTTCATaGTTTGCTCTAAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPSIDLS*FALKCL
Trigger: GAGGCACTTTAGAGCAAATCATGAAAGATCGATGGA...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTAGGCCGCTTATTTTCTaGGTTGTTACTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: FLGLGEILCATAVPRGSPRPLIF*VVTLSL
Trigger: AAGACTCAGAGTAACAACGCAGAAAATAAGCGGCCT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCAGATACCATCCCAGATaGACTTGTAACCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSRYHPR*TCNPGA
Trigger: AGCTCCAGGGTTACAAGTGCATCTGGGATGGTATCT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCATAGTTTCTGGAGGCTaGAGGAGTTCAGTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSIVSGG*RSSVES
Trigger: AGACTCAACTGAACTCCTCCAGCCTCCAGAAACTAT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCATTTTTAAAGCCATTTaGCCTGAGTGGGCCAATGTG +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSIFKAI*PEWANV
Trigger: CACATTGGCCCACTCAGGGCAAATGGCTTTAAAAAT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR GCA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCGATCTTTCATGATTTaGTCTAAAGTGCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KFLGLGEILCATAVPRGSRSFMI*SKVPLL
Trigger: CAAGAGAGGCACTTTAGAGCAAATCATGAAAGATCG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS GCA 90 bp GGCTGTGCCGCCTTTCGGCCGGGCCGCGCCGCTCCGCCTACTCTCTaGCGCCGCAGCCGGCCGCCTGCCTCGCTCCTCCCCTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GCAAFRPGRAAPPTL*RRSRPPASLLPCPQ
Trigger: CTGAGGGCAGGGGAGGAGCGAGGCAGGCGGCCGGCTGCGGCGGCAGAGAGTAGGCGGAGCGGCGCGGCCCGGCCGAAAGGCGGCACAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000508192.5
CDS-3UTR CAA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCGAGGGAGGCGGAGCCTaGTGCCGGCCCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAEGGGA*CRPSSL
Trigger: GAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCCCTC...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGAGGGAGGCGGAGCCTaGTGCCGGCCCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQREGGGA*CRPSSL
Trigger: GAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCCCTC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAARRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRRRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGRRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAGCCCAGAGGCCTTGTaGGGGTGCACGGAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGSPEAL*GCTEAD
Trigger: GTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGCT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGAGCCCAGAGGCCTTGTaGGGGTGCACGGAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPSPEAL*GCTEAD
Trigger: GTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGCT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CAA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGAGCCCAGAGGCCTTGTaGGGGTGCACGGAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVSPEAL*GCTEAD
Trigger: GTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGCT...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGCAGGAGGGCTGAGGTaGGCAAGGCCCCTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRAGGLR*ARPLPR
Trigger: CCTAGGAAGGGGCCTTGCCAACCTCAGCCCTCCTGC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAALKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAARRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACGCCGCTGCCCCAGCACACTaGCCTGGGCCGCGGCACCTC +
Preference number: 5 (lower is better)
Translates to: KLRDAVATTSQAPQTAHAAAPAH*PGPRHL
Trigger: GAGGTGCCGCGGCCCAGGCAAGTGTGCTGGGGCAGC...GGCGTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGAGGGAACCGAGAAGCTaGGAGGAAGGGAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAREPRS*EEGREG
Trigger: CCCTTCCCTCCCTTCCTCCAAGCTTCTCGGTTCCCT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKRRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGGGGCTGTGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPGAVLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCACAGCCCC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGGGGCTGTGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRGAVLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCACAGCCCC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAASRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SGPALETNSPSGPLGTEKESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCCACCTCTGGTGGTTaGCTTGGAGGGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAATSGG*LGGEGG
Trigger: CCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCGAGGGAGGCGGAGCCTaGTGCCGGCCCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: AVLSDKGSPITECPVALLEGGGA*CRPSSL
Trigger: GAGGCTGGAGGGCCGGCACAAGGCTCCGCCTCCCTC...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCGTCCCCACAGCAGCTaGTGGAAGGAAATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GGQTLPALLPNSAFCQVARPHSS*WKEMPS
Trigger: GCTGGGCATTTCCTTCCACAAGCTGCTGTGGGGACG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAGGGAACCGAGAAGCTaGGAGGAAGGGAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAREPRS*EEGREG
Trigger: CCCTTCCCTCCCTTCCTCCAAGCTTCTCGGTTCCCT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAARPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGDGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRDGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRRRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: PCCLTQPSARWPSAVSPELKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: GKATSGGLLGGEGGRRGELKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAACSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGGGGCTGTGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRGAVLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCACAGCCCC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACGTCCCCACAGCAGCTaGTGGAAGGAAATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGARPHSS*WKEMPS
Trigger: GCTGGGCATTTCCTTCCACAAGCTGCTGTGGGGACG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCGTCCCCACAGCAGCTaGTGGAAGGAAATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRRPHSS*WKEMPS
Trigger: GCTGGGCATTTCCTTCCACAAGCTGCTGTGGGGACG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGAGCCCAGAGGCCTTGTaGGGGTGCACGGAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSPEAL*GCTEAD
Trigger: GTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGCT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCCCTTGGTCTTCAGCTaGGTATTTGGTCCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGPLVFS*VFGPRG
Trigger: GCCTCGGGGACCAAATACCAAGCTGAAGACCAAGGG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS CCA 90 bp AGGCAGGCAGGGCCCGGGTCTCTCACCTGTCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTGGGGAATTCC +
Preference number: 5 (lower is better)
Translates to: RQAGPGSLTCLCHSG*RPGRGWPAPKVGNS
Trigger: GGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTGAGAGACCCGGGCCCTGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS CCA 90 bp CTAGCTCATGCACGGCCTTCCCTGTGGCTGGGAAGTTGGGGAAGCTaGAGGAGGGCTGGCTGTGGGGACGTGCTACCCGGGATGGCATCA +
Preference number: 5 (lower is better)
Translates to: LAHARPSLWLGSWGS*RRAGCGDVLPGMAS
Trigger: TGATGCCATCCCGGGTAGCACGTCCCCACAGCCAGCCCTCCTCCAGCTTCCCCAACTTCCCAGCCACAGGGAAGGCCGTGCATGAGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS-3UTR CAA 90 bp CTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGCGACAGTGTCAGGCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LPGGPRQCLLRGGGDSVRRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...CCTGACACTGTCGCCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGADGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAADGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: GLGEILCATAVPRGSPAPLKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAASFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRLNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGCCACCTCTGGTGGTTaGCTTGGAGGGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEATSGG*LGGEGG
Trigger: CCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCAGGAGGGCTGAGGTaGGCAAGGCCCCTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPAGGLR*ARPLPR
Trigger: CCTAGGAAGGGGCCTTGCCAACCTCAGCCCTCCTGC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGGCAGAGAGACTGGGTTaGGCAAGGAGAGCAACAGGG +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAAERLG*ARRATG
Trigger: CCCTGTTGCTCTCCTTGCCAAACCCAGTCTCTCTGC...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS GCA 90 bp TGGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGGAGAGGACGCTGTTCGTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: WRPGRGWPAPKVGNS*FDLCWWRGRCSWRG
Trigger: CCCCCTCCACGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000408948.7
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000535116.1
ENST00000676602.1
ENST00000677688.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS GCA 90 bp CAGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGGAGAGGACGCTGTTCGTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QRPGRGWPAPKVGNS*FDLCWWRGRCSWRG
Trigger: CCCCCTCCACGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377810.8
CDS CCA 90 bp GGGCAGGAGGAAGGCAATGCAGGCCACTCCTCACGTGGGCAGCCATaGGAGAGATGGGATCTGAAGGCCCAGAGACCCTGTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GQEEGNAGHSSRGQP*ERWDLKAQRPCELC
Trigger: GCACAGCTCACAGGGTCTCTGGGCCTTCAGATCCCATCTCTCCCATGGCTGCCCACGTGAGGAGTGGCCTGCATTGCCTTCCTCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS-3UTR CAA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GKATSGGLLGGEGGRRGEVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGNSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAANSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: AVLSDKGSPITECPVALLRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAGGAGGGGGTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LTQPSARWPSAVSPERRGSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...CCCCCTCCTCTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGALNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRLNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGCAGGAGGGCTGAGGTaGGCAAGGCCCCTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPAGGLR*ARPLPR
Trigger: CCTAGGAAGGGGCCTTGCCAACCTCAGCCCTCCTGC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGATGGTTAGGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRMVRLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCCTAACCAT...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGTGCAGAGATCTCCTGTaGTTTTGCTACGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPCRDLL*FCYGLG
Trigger: CCCCAAGCCGTAGCAAAACAACAGGAGATCTCTGCA...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATCTTCAGCTTGGTATTaGGTCCCCGAGGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGASSAWY*VPEACR
Trigger: TCTGCAGGCCTCGGGGACCAAATACCAAGCTGAAGA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS TCA 90 bp GGGAGCAGGGAGCAATGCGCTGGCAGGGACAGGAGACGGTGCTGCTaGCAGACATCACCCTGTGAGACATGGCTCCTAGGGAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GSREQCAGRDRRRCC*QTSPCETWLLGSEA
Trigger: TGCCTCACTCCCTAGGAGCCATGTCTCACAGGGTGATGTCTGTCAGCAGCACCGTCTCCTGTCCCTGCCAGCGCATTGCTCCCTGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS CCA 90 bp AGGGCCCGGGTCTCTCACCTGTCTTTGCCATTCTGGATGGAGGCCTaGCCGAGGCTGGCCCGCTCCAAAAGTGGGGAATTCCTGCTTCGA +
Preference number: 5 (lower is better)
Translates to: RARVSHLSLPFWMEA*PRLARSKSGEFLLR
Trigger: TCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTGAGAGACCCGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAGGGAACCGAGAAGCTaGGAGGAAGGGAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPREPRS*EEGREG
Trigger: CCCTTCCCTCCCTTCCTCCAAGCTTCTCGGTTCCCT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
CDS-3UTR CAA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCAGGGAACCGAGAAGCTaGGAGGAAGGGAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GLGEILCATAVPRGSPAPREPRS*EEGREG
Trigger: CCCTTCCCTCCCTTCCTCCAAGCTTCTCGGTTCCCT...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGGAACCGAGAAGCTaGGAGGAAGGGAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPREPRS*EEGREG
Trigger: CCCTTCCCTCCCTTCCTCCAAGCTTCTCGGTTCCCT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: KGSPITECPVALLWRPTAAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGANSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGGGGCTGTGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPGAVLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCACAGCCCC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAANLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: GGQTLPALLPNSAFCQVANSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGATGGTTAGGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAAMVRLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCCTAACCAT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS-3UTR CAA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGGCAGAGAGACTGGGTTaGGCAAGGAGAGCAACAGGG +
Preference number: 5 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKAERLG*ARRATG
Trigger: CCCTGTTGCTCTCCTTGCCAAACCCAGTCTCTCTGC...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CAA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGAGTGGGAAGAAGAAATaGTTGGGGCAAGGGGGTAGG +
Preference number: 5 (lower is better)
Translates to: SGPALETNSPSGPLGTEKSGKKK*LGQGGR
Trigger: CCTACCCCCTTGCCCCAACAATTTCTTCTTCCCACT...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS CCA 90 bp GAGCAACAGGGACAAAGCCCCGCTGGCTTCTCAAGGGCCAGAGCCTaGTGGTCAGGAAGCGCGTGCAATTCCAGGACAGCACACCAGAAG +
Preference number: 5 (lower is better)
Translates to: EQQGQSPAGFSRARA*WSGSACNSRTAHQK
Trigger: CTTCTGGTGTGCTGTCCTGGAATTGCACGCGCTTCCTGACCACCAGGCTCTGGCCCTTGAGAAGCCAGCGGGGCTTTGTCCCTGTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVTIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGTIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAATIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GGQTLPALLPNSAFCQVATIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GDTPIHRCSLAQVGRRSGQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...GCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGCAGACGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GGQTLPALLPNSAFCQVAQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...GGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCGTCTGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GLGEILCATAVPRGSPAPDGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp AAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGCCGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: KGSPITECPVALLWRPTADGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...GGCTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQDGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCGATGGGGCGCTGCTATaGGTCAGATCAGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPDGALL*VRSAEG
Trigger: GCCTTCAGCTGATCTGACCAATAGCAGCGCCCCATC...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGGGGCTGTGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPGAVLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCACAGCCCC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000508192.5
ENST00000677303.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAANLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAANSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGTGGCCCTGCTCTGGAGACCAACAGCCCAAGCGGCCCCCTGGGGACCGAGAAGAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: SGPALETNSPSGPLGTEKNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...CTTCTCGGTCCCCAGGGGGCCGCTTGGGCTGTTGGTCTCCAGAGCAGGGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: PCCLTQPSARWPSAVSPELNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGTTCCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GRHTNPSLQSRPGGAAQRFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGGAA...CCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGTTCCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGGAA...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
CDS-3UTR CAA 90 bp AGTCGCTTAGCCTATCTGTCCCCCACCCTGTGGAGGGCAGACGCTCCCGGCCCTAAGATGGCACAGACTTaGAGGGAACACACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SRLAYLSPTLWRADAPGPKMAQT*REHTSP
Trigger: TGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCTT...AGGGCCGGGAGCGTCTGCCCTCCACAGGGTGGGGGACAGATAGGCTAAGCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS TCA 90 bp CCCTTACTCAGCCAGAGCAGGCGACACCTTCCACCACCTCCTCAGTaGAAAGTAGCTAAGCAGCCAGGCCGAGCGGTTCCTGCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: PLLSQSRRHLPPPPQ*KVAKQPGRAVPAWE
Trigger: TTCCCAGGCAGGAACCGCTCGGCCTGGCTGCTTAGCTACTTTTCACTGAGGAGGTGGTGGAAGGTGTCGCCTGCTCTGGCTGAGTAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509502.6
ENST00000512060.1
ENST00000677688.1
CDS CCA 90 bp GGGCTGTGCTGTCTTTGCCATTCTGGATGGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGGAATTCCTGCTTCGATTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GLCCLCHSGWRPGRG*PAPKVGNSCFDLCW
Trigger: CCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000408948.7
ENST00000508192.5
ENST00000676602.1
ENST00000677303.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS CCA 90 bp CAACAGGGACAAAGCCCCGCTGGCTTCTCAAGGGCCAGAGCCTGGTaGTCAGGAAGCGCGTGCAATTCCAGGACAGCACACCAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: QQGQSPAGFSRARAW*SGSACNSRTAHQKQ
Trigger: TTGCTTCTGGTGTGCTGTCCTGGAATTGCACGCGCTTCCTGACCACCAGGCTCTGGCCCTTGAGAAGCCAGCGGGGCTTTGTCCCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS CCA 90 bp TGCCAAGAGGTGAAATGGCAGAGGGCCCCTGCTCAAGGGCTAGAATaGAACCCGAGGTCCAGCCACAAGGCCTCTATCAGAGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: CQEVKWQRAPAQGLE*NPRSSHKASIRGSP
Trigger: AGGGCTGCCTCTGATAGAGGCCTTGTGGCTGGACCTCGGGTTCCATTCTAGCCCTTGAGCAGGGGCCCTCTGCCATTTCACCTCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCCGGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: RHTNPSLQSRPGGAAQRPAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...CGGCCGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CGCTCCCGGCCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: RSRPCCLTQPSARWPSAVAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...CACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGGCCGGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCGGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: GETHQSIAAVSPRWGGAAAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...CGCTGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRTIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: QQGRHTNPSLQSRPGGAATIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...CGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCCAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCACAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTCGCCGCTGCTTGGGATaGGCCGACACGCTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: FLGLGEILCATAVPRGSPRRCLG*ADTLRC
Trigger: ACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCG...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp GCTGTGCTTTCAGACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: AVLSDKGSPITECPVALLCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...GAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGTCTGAAAGCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTGTTCGTGGAGGGGGTaGGGGTGGTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPCSWRG*GWSSSS
Trigger: AGAGGAAGAAGACCACCCCAACCCCCTCCACGAACA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAAGGCCACCTCTGGTGGTTTGCTTGGAGGGGAAGGAGGGAGGAGAGGGGAGAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: GKATSGGLLGGEGGRRGENSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...CTCCCCTCTCCTCCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPSFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTGAGAGCCGCGGCAGTTaGCACACCTCCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCESRGS*HTSISH
Trigger: GTGGGAGATGGAGGTGTGCAAACTGCCGCGGCTCTC...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPLNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPLNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRLNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGAAGATGGCACAGACTTaGAGGGAACACACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PCCLTQPSARWPSAVSPEKMAQT*REHTSP
Trigger: TGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCTT...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGATGGTTAGGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRMVRLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCCTAACCAT...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp CTGAGCCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGAGGGCCACACAGACTaGGTTAAGCAGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSHPPGKPHRSSLDCPNGEGHTD*VKQMEE
Trigger: CTCCTCCATCTGCTTAACCAAGTCTGTGTGGCCCTC...CCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTTCATTCAGGTTCCTaGGTTGGGTGGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQVHSGS*VGWVGK
Trigger: CTTCCCCACCCACCCAACCAAGGAACCTGAATGAAC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS TCA 90 bp ATGCAGGCCACTCCTCACGTGGGCAGCCATGGGAGAGATGGGATCTaGAGGCCCAGAGACCCTGTGAGCTGTGCAAAGCTTCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: MQATPHVGSHGRDGI*RPRDPVSCAKLQHQ
Trigger: CTGATGCTGAAGCTTTGCACAGCTCACAGGGTCTCTGGGCCTTCAGATCCCATCTCTCCCATGGCTGCCCACGTGAGGAGTGGCCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS GCA 90 bp GGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGTGAGGTCTGCGTACAAACTTGGAGG +
Preference number: 5 (lower is better)
Translates to: GSGAWPPEILPFLCR*RHCPPREVCVQTWR
Trigger: CCTCCAAGTTTGTACGCAGACCTCACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350490.11
ENST00000425897.3
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCAGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: SRGDTPIHRCSLAQVGRRAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...GCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRNSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: GLGEILCATAVPRGSPAPNSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPNSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp ACGCAAGGGCTCGGCTTAATCGCTGAGCCTGGCCTGGGAGCGGGGGTGATGAAGAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TQGLGLIAEPGLGAGVMKNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...CTTCATCACCCCCGCTCCCAGGCCAGGCTCAGCGATTAAGCCGAGCCCTTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp GCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGTGGGGCGGCGCATTTCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: AGETHQSIAAVSPRWGGAFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGAAA...TGCGCCGCCCCACCTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPLNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCAAGATGGCACAGACTTaGAGGGAACACACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRKMAQT*REHTSP
Trigger: TGGGGACGTGTGTTCCCTCAAAGTCTGTGCCATCTT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp ACAAAGGCTCCCCCATCACAGAGTGCCCAGTGGCCCTGCTCTGGAGACCAACAGGGGAAGAAGAAATTGTaGGGGCAAGGGGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: TKAPPSQSAQWPCSGDQQGKKKL*GQGGRV
Trigger: CACCCTACCCCCTTGCCCCAACAATTTCTTCTTCCC...CTGTTGGTCTCCAGAGCAGGGCCACTGGGCACTCTGTGATGGGGGAGCCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS-3UTR CAA 90 bp TGCTCCATTTGTGAGACAAAAGCTCCTAAGGTCTGGGGGAGCCAGACTGAAACCCCCTGCTGGGGCCCCTaGAGGCAGCAGCCAGTCATG +
Preference number: 5 (lower is better)
Translates to: CSICETKAPKVWGSQTETPCWGP*RQQPVM
Trigger: CATGACTGGCTGCTGCCTCAAGGGGCCCCAGCAGGG...GGTTTCAGTCTGGCTCCCCCAGACCTTAGGAGCTTTTGTCTCACAAATGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS CCA 90 bp TGGTTAGGCTGTCTTTGCCATTCTGGATGGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGGAATTCCTGCTTCGATTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: WLGCLCHSGWRPGRG*PAPKVGNSCFDLCW
Trigger: CCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402010.8
ENST00000425897.3
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS CCA 90 bp TCTCTCACCTGTCTTTGCCATTCTGGATGGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGGAATTCCTGCTTCGATTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLTCLCHSGWRPGRG*PAPKVGNSCFDLCW
Trigger: CCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS CCA 90 bp CCTGTAAGAGACCAGGCAGGGATCTCAGTCAGAGCTGGCTGGAGGTaGAAGAAGTGGGGGCACAACAGGAAGAGGCAGTTCCACACCTAC +
Preference number: 5 (lower is better)
Translates to: PVRDQAGISVRAGWR*KKWGHNRKRQFHTY
Trigger: GTAGGTGTGGAACTGCCTCTTCCTGTTGTGCCCCCACTTCTTCCACCTCCAGCCAGCTCTGACTGAGATCCCTGCCTGGTCTCTTACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678482.1
ENST00000679321.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp TGCTCCATTTGTGAGACAAAAGCTCCTAAGGTCTGGGGGAGCCAGACTGAAACCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: CSICETKAPKVWGSQTETRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GGTTTCAGTCTGGCTCCCCCAGACCTTAGGAGCTTTTGTCTCACAAATGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CAA 90 bp CCCTGCTGCCTAACTCAGCCTTCTGCCAGGTGGCCCTCGGCAGTGTCTCCTGAGTTCCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PCCLTQPSARWPSAVSPEFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGGAA...CTCAGGAGACACTGCCGAGGGCCACCTGGCAGAAGGCTGAGTTAGGCAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377810.8
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCAGCCCAGAGGCCTTGTaGGGGTGCACGGAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSSPEAL*GCTEAD
Trigger: GTCGGCCTCCGTGCACCCCAACAAGGCCTCTGGGCT...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTCCAGCTCCCCGCACTTaGGAAGAGACAGGCCATATC +
Preference number: 5 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCPAPRT*EETGHI
Trigger: GATATGGCCTGTCTCTTCCAAAGTGCGGGGAGCTGG...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS TCA 90 bp AGTCAAGGTGTCCCAAGGTGGGCATCATCAGGCGCTGAGCTGGTGTaGAATCAGTTCTTCCCGTGCCATGCTCCTGGGCTTTTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SQGVPRWASSGAELV*NQFFPCHAPGLFSH
Trigger: GTGGGAGAAAAGCCCAGGAGCATGGCACGGGAAGAACTGATTTCACACCAGCTCAGCGCCTGATGATGCCCACCTTGGGACACCTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543674.1
CDS TCA 90 bp AAACAGCAGGCAGGTTTTGGCTGGGTGCCTCTACTGGAGGGAGTGTaGGCCCGTGTGCGTGAATATTCAGAATCCGAGCTGCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: KQQAGFGWVPLLEGV*ARVREYSESELLPW
Trigger: CCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACGGGCTCACACTCCCTCCAGTAGAGGCACCCAGCCAAAACCTGCCTGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPTIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQTIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAACTATCTGGCGGAATTaGGCTCGAGCCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPTIWRN*ARASFS
Trigger: AGAAAAAGAGGCTCGAGCCAAATTCCGCCAGATAGT...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCCAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: RGEVPAGETHQSIAAVSPQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...GGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGTGGCCATCACCTCGTaGTATCTCTGGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: FLGLGEILCATAVPRGSPVAITS*YLWPTS
Trigger: GCTGGTGGGCCAGAGATACAACGAGGTGATGGCCAC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTG +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSLKRRC*GLADTL
Trigger: CAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCAACTTGGAGGTGAACTaGCTGAAGATGCTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPNLEVN*LKMLPE
Trigger: CTCTGGGAGCATCTTCAGCAAGTTCACCTCCAAGTT...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CCACCCTCCCGGGAAACCCCACAGATCCAGTCTCGACTGTCCCAATGGGGCAGGTTTCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PPSRETPQIQSRLSQWGRFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGAAA...CCTGCCCCATTGGGACAGTCGAGACTGGATCTGTGGGGTTTCCCGGGAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCTCCTTTTCTTTGTCGTaGCCGCCACTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: AQTLREHTSPQQLVEGNASFSLS*PPLPTT
Trigger: CGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGA...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCGGAGGGAGCGGGGCTaGGCCTCCCGAAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSRRERG*ASRNSS
Trigger: GGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTTCCCGCATCATCTCGTaGGGCTCCATGGAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: FLGLGEILCATAVPRGSPSRIIS*GSMELV
Trigger: CACGAGCTCCATGGAGCCCAACGAGATGATGCGGGA...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCATTCCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GEKCQQGRHTNPSLQSRPFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGGAA...TGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTTCCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGGAA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377810.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
CDS GCA 90 bp TGGAGGGAGTGTGAGCCCGTGTGCGTGAATATTCAGAATCCGAGCTaGTGCCTTGGTTCAGTGACAGTACACACCCCAGCTTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WRECEPVCVNIQNPS*CLGSVTVHTPAWSV
Trigger: CACAGACCAAGCTGGGGTGTGTACTGTCACTGAACCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACGGGCTCACACTCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS GCA 90 bp CAGGTTTTGGCTGGGTGCCTCTACTGGAGGGAGTGTGAGCCCGTGTaGGTGAATATTCAGAATCCGAGCTGCTGCCTTGGTTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: QVLAGCLYWRECEPV*VNIQNPSCCLGSVT
Trigger: TGTCACTGAACCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACGGGCTCACACTCCCTCCAGTAGAGGCACCCAGCCAAAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS-3UTR CAA 90 bp GGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCCCAGGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: GRSASRGDTPIHRCSLAQAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...CTGGGCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCCAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp CGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCAATTCCTGCTTCGATTaGTGCTGGTGGAGAGGACGC +
Preference number: 5 (lower is better)
Translates to: REAEGAGLGLPKFFLFFVNSCFD*CWWRGR
Trigger: GCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATT...GACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGCCCCCTTTCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GLGEILCATAVPRGSPAPFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGAAA...GGGGGCAGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp GGAGGGGAGAAGTGCCAGCAGGGGAGACACACCAATCCATCGCTGCAGTCTCGCTTTCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GGEKCQQGRHTNPSLQSRFLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGAAA...GCGAGACTGCAGCGATGGATTGGTGTGTCTCCCCTGCTGGCACTTCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp GCACAGACTTTGAGGGAACACACGTCCCCACAGCAGCTTGTGGAAGGAAATGCCTTAAATCGAACCCCGTaGAGAGAGAGCCGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: AQTLREHTSPQQLVEGNALNRTP*RESRGS
Trigger: ACTGCCGCGGCTCTCTCTCAACGGGGTTCGATTTAA...GGCATTTCCTTCCACAAGCTGCTGTGGGGACGTGTGTTCCCTCAAAGTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGCCACCTCTGGTGGTTaGCTTGGAGGGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSATSGG*LGGEGG
Trigger: CCCTCCTTCCCCTCCAAGCAAACCACCAGAGGTGGC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377810.8
ENST00000402010.8
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp AATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCGCCCCAAACCGCCCACATGGTTAGGCTGTCTTaGCCATTCTGGATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: NKLRDAVATTSQAPQTAHMVRLS*PFWMEA
Trigger: GGCCTCCATCCAGAATGGCAAAGACAGCCTAACCAT...GTGGGCGGTTTGGGGCGCTTGGCTGGTGGTGGCCACTGCATCCCTTAATTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402010.8
ENST00000677688.1
CDS-3UTR CAA 90 bp ATCTCCTGTTGTTTTGCTACGGCTTGGGGTAGAATGGCCGTTGCCCTAGAATGTCTTAGCCCTGCCTGTTaGTACTGGGGGCACGGAGGG +
Preference number: 5 (lower is better)
Translates to: ISCCFATAWGRMAVALECLSPAC*YWGHGG
Trigger: CCCTCCGTGCCCCCAGTACAAACAGGCAGGGCTAAG...ACATTCTAGGGCAACGGCCATTCTACCCCAAGCCGTAGCAAAACAACAGGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS GCA 90 bp AAGATGGCTTGGTGGACTGGCGATTATTACGATGGCAGGCTAGACTaGTCCCAAGGCCAAATGGCCTACCCCACGCTGACTTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: KMAWWTGDYYDGRLD*SQGQMAYPTLTSSV
Trigger: CACAGAAGAAGTCAGCGTGGGGTAGGCCATTTGGCCTTGGGAGCAGTCTAGCCTGCCATCGTAATAATCGCCAGTCCACCAAGCCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGCAGAGGTGGCTGAGTaGCGGCCCCGAATCATGTTG +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSAEVAE*RPRIML
Trigger: CAACATGATTCGGGGCCGCAACTCAGCCACCTCTGC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp GGGAATCTCTGGGCAGGGGTGAATGTGGGGTGCTGGAGAACAATCTCCCACCCCGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: GNLWAGVNVGCWRTISHPAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...GGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCTGCCCAGAGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000508192.5
ENST00000513765.7
ENST00000677688.1
ENST00000679216.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCGGCCCCGAATCATGTaGGACTTACTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSRPRIM*DLLLGL
Trigger: CAAGCCCAGCAGTAAGTCCAACATGATTCGGGGCCG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp CAGGAAGGGGACTGTGAAGGGAGACCCCTGAGTAAGGGTGCAGAGATCTCCTGTAGATCTCCTGTTGTTTaGCTACGGCTTGGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: QEGDCEGRPLSKGAEISCRSPVV*LRLGVE
Trigger: TTCTACCCCAAGCCGTAGCAAAACAACAGGAGATCT...ACAGGAGATCTCTGCACCCTTACTCAGGGGTCTCCCTTCACAGTCCCCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CAA 90 bp CACGTGAAGCGGAGGGAGCGGGGCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGCTCTTAACCTGGCCCTaGGTCTTCAGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: HVKRRERGLASRNSSFSLLLTWP*VFSLVF
Trigger: AAATACCAAGCTGAAGACCAAGGGCCAGGTTAAGAG...CAAAGAAAAGGAAGAATTTCGGGAGGCCAAGCCCCGCTCCCTCCGCTTCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS TCA 90 bp AAGATGCAGGAAGTAGGTCAGACAGGTAGGCCAAGTGGCTGGGAATaGACAGAAAGACTTCACAAGAGCCAGTGCCTATGGCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KMQEVGQTGRPSGWE*TERLHKSQCLWPGS
Trigger: GCTTCCTGGCCATAGGCACTGGCTCTTGTGAAGTCTTTCTGTTCATTCCCAGCCACTTGGCCTACCTGTCTGACCTACTTCCTGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 90 bp TTGAAGACTGCAGACTCCAGAAGGCAGTGCACCTCGGGGAGAAGATaGCATGCTGGAAAGCAGTGCCTTGCTGTTGGGGAAGAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LKTADSRRQCTSGRR*HAGKQCLAVGEEER
Trigger: TCTTTCTTCTTCCCCAACAGCAAGGCACTGCTTTCCAGCATGTCATCTTCTCCCCGAGGTGCACTGCCTTCTGGAGTCTGCAGTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS GCA 90 bp ACCAGGTTGCCTGAAAGACTGAGAAAGCCTGGAGTGTGCCTGCCTTaGTTGGCAGCACTAAAAGGTGATGTGCCAAGAGGTGAAATGGCA +
Preference number: 5 (lower is better)
Translates to: TRLPERLRKPGVCLP*LAALKGDVPRGEMA
Trigger: TGCCATTTCACCTCTTGGCACATCACCTTTTAGTGCTGCCAAGCAAGGCAGGCACACTCCAGGCTTTCTCAGTCTTTCAGGCAACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS-3UTR CAA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: FLGLGEILCATAVPRGSPNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677303.1
ENST00000677688.1
CDS-3UTR CAA 90 bp AGGGGAGTTAGTGATGGAGGCAGGACACAGGACACAGACACACACACACACACAAATTCTTCCTTTTCTTaGTCGTTGCCGCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RGVSDGGRTQDTDTHTHTNSSFS*SLPPLP
Trigger: GGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATT...TGTGTGTGTGTGTGTGTCTGTGTCCTGTGTCCTGCCTCCATCACTAACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS-3UTR CAA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTGGTCTGCGTACAAACTaGGAGGTGAACTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FLGLGEILCATAVPRGSPGLRTN*EVNLLK
Trigger: CTTCAGCAAGTTCACCTCCAAGTTTGTACGCAGACC...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350490.11
CDS-3UTR CAA 90 bp TTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCCTACAGTCTCCCCTTACTaGAGGACAGGCGTTAACTGT +
Preference number: 5 (lower is better)
Translates to: FLGLGEILCATAVPRGSPTVSPY*RTGVNC
Trigger: ACAGTTAACGCCTGTCCTCAAGTAAGGGGAGACTGT...AGGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677303.1
CDS GCA 90 bp GTGTCCTCAAACTTGAGTATCTTGGTGATGGAGATGGTATGTGTGTaGCTGCCTGCAAAGCAGCTGGGATACAGCTGTGGAACTTTCAGC +
Preference number: 5 (lower is better)
Translates to: VSSNLSILVMEMVCV*LPAKQLGYSCGTFS
Trigger: GCTGAAAGTTCCACAGCTGTATCCCAGCTGCTTTGCAGGCAGGCACACACATACCATCTCCATCACCAAGATACTCAAGTTTGAGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCCAGAAGGTGTCCAGCTaGTTCCCAAAGGTGAATTCA +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSQKVSS*FPKVNS
Trigger: TGAATTCACCTTTGGGAACAAGCTGGACACCTTCTG...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS-3UTR CAA 90 bp AAATTTCTTGGTTTAGGCGAAATACTCTGTGCAACCGCAGTACCGAGGGGGAGCGCTGGAGGAGTTCAGTaGAGTCTTGTCAATGATCTT +
Preference number: 5 (lower is better)
Translates to: KFLGLGEILCATAVPRGSAGGVQ*SLVNDL
Trigger: AAGATCATTGACAAGACTCAACTGAACTCCTCCAGC...GCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAGAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000502399.7
ENST00000677688.1
CDS TCA 90 bp TCTGTTCTAGGGGATAGGCCTTTCCTTCCTGGGCCTCTAGGGTGGTaGCAGAAGAAGCCACTCCTATATATAGCTGATGCCAATTTTAAT +
Preference number: 5 (lower is better)
Translates to: SVLGDRPFLPGPLGW*QKKPLLYIADANFN
Trigger: ATTAAAATTGGCATCAGCTATATATAGGAGTGGCTTCTTCTGTCACCACCCTAGAGGCCCAGGAAGGAAAGGCCTATCCCCTAGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 90 bp ATGGTTATTGATGGTTTTATCATGGAGAACCAAGAGGCAACAACCTaGCTCCCACTCAAAGGCACAAGGAGAAGTGCATGCCTTACCTTT +
Preference number: 5 (lower is better)
Translates to: MVIDGFIMENQEATT*LPLKGTRRSACLTF
Trigger: AAAGGTAAGGCATGCACTTCTCCTTGTGCCTTTGAGTGGGAGCCAGGTTGTTGCCTCTTGGTTCTCCATGATAAAACCATCAATAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679213.1
ENST00000679321.1
CDS TCA 90 bp GCCAGAATCAGACTGGCTTTAGTAACAAAGAGTCTCAAAAGGTTTTaGAAATGGCTCTATTTGTCTGGTGTTGGTGCCTTCCAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: ARIRLALVTKSLKRF*KWLYLSGVGAFQRV
Trigger: GACTCTCTGGAAGGCACCAACACCAGACAAATAGAGCCATTTTCAAAACCTTTTGAGACTCTTTGTTACTAAAGCCAGTCTGATTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 90 bp TCCTCCCTGTGGTTTCCTCTCCGAGTTCTTAACACAATCCAGCAATaGTGTAAATTTTCTCCCTCATCTTCTCATCCTGAAAAAGCACTT +
Preference number: 5 (lower is better)
Translates to: SSLWFPLRVLNTIQQ*CKFSPSSSHPEKAL
Trigger: AAGTGCTTTTTCAGGATGAGAAGATGAGGGAGAAAATTTACACCATTGCTGGATTGTGTTAAGAACTCGGAGAGGAAACCACAGGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543674.1
CDS TCA 90 bp TCAAGCAGAGACACCCTGATGATGACAACAATGTTTCTACTGAACTaGAGAACCCTTGAAGGGATCCCAGGGGTAACAATAAATAGGAAA +
Preference number: 5 (lower is better)
Translates to: SSRDTLMMTTMFLLN*RTLEGIPGVTINRK
Trigger: TTTCCTATTTATTGTTACCCCTGGGATCCCTTCAAGGGTTCTTCAGTTCAGTAGAAACATTGTTGTCATCATCAGGGTGTCTCTGCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS GCA 90 bp CTGTTAGCACGAATCATGCCTTCTCCTAACTCAACTGCCACAATATaGTTATGGAGAAAATATCTGATTTGCCACAAGATGAACAGAACT +
Preference number: 5 (lower is better)
Translates to: LLARIMPSPNSTATI*LWRKYLICHKMNRT
Trigger: AGTTCTGTTCATCTTGTGGCAAATCAGATATTTTCTCCATAAGCATATTGTGGCAGTTGAGTTAGGAGAAGGCATGATTCGTGCTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp GGCAGCAGGTGCACCAGCTGCCCCAGCACACTTGCCTaGGCCGCGGCACCTCACAGTTACTCTCCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GSRCTSCPSTLA*AAAPHSYSPWG
Trigger: CCCCCACGGAGAGTAACTGTGAGGTGCCGCGGCCCAGGCAAGTGTGCTGGGGCAGCTGGTGCACCTGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677688.1
CDS CAA 72 bp ATGGCGCCGGTATCTCGGGGGAGGGAACCGAGAAGCTaGGAGGAAGGGAGGGAAGGGAAGGCGCGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: MAPVSRGREPRS*EEGREGKARSP
Trigger: CGGGCTCCGCGCCTTCCCTTCCCTCCCTTCCTCCAAGCTTCTCGGTTCCCTCCCCCGAGATACCGGCGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
CDS CCA 72 bp GGCAGGGCCCGGGTCTCTCACCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGGCTGGCCCGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: GRARVSHLSLPF*MEAWPRLARSK
Trigger: TTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTGAGAGACCCGGGCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS CAA 72 bp GCAGGACCAGCTGCCTGGTCGCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTGCGCTGTACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: AGPAAWSLKRRC*GLADTLRCTLW
Trigger: CCACAAGGTACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGACCAGGCAGCTGGTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS GCA 72 bp ATGGCAGGACCAGCTGCCTGGTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACGCTGCGCTGTACCTTG +
Preference number: 6 (lower is better)
Translates to: MAGPAAWSLKRR*LGLADTLRCTL
Trigger: CAAGGTACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGACCAGGCAGCTGGTCCTGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361128.9
ENST00000402010.8
ENST00000513765.7
CDS GCA 72 bp GGAATGGCAGGACCAGCCTGGTCGCTGAAGCGCCGCTaGTTGGGATTGGCCGACACGCTGCGCTGTACCTTG +
Preference number: 6 (lower is better)
Translates to: GMAGPAWSLKRR*LGLADTLRCTL
Trigger: CAAGGTACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCATTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000408948.7
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000676602.1
ENST00000677688.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS CCA 72 bp GGGCCCGGGTCTCTCACCTGTCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: GPGSLTCLCHSG*RPGRGWPAPKV
Trigger: CACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTGAGAGACCCGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS CAA 72 bp ATGGCAGGACCAGCCTGGTCGCTGAAGCGCCGCTGCTaGGGATTGGCCGACACGCTGCGCTGTACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: MAGPAWSLKRRC*GLADTLRCTLW
Trigger: CCACAAGGTACAGCGCAGCGTGTCGGCCAATCCCAAGCAGCGGCGCTTCAGCGACCAGGCTGGTCCTGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000350490.11
ENST00000377810.8
ENST00000408948.7
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000676602.1
ENST00000677688.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS CCA 72 bp CGGGACCCTGGCATGGTTAGGCTGTCTTTGCCATTCTaGATGGAGGCCTGGCCGAGGCTGGCCCGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: RDPGMVRLSLPF*MEAWPRLARSK
Trigger: TTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCATGCCAGGGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402010.8
ENST00000425897.3
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS CCA 72 bp CCCAGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATTTGTGCTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: PRGLAEAGPLQK*GIPASICAGGE
Trigger: CTCTCCACCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377810.8
CDS CCA 72 bp CAAAGCCCCGCTGGCTTCTCAAGGGCCAGAGCCTGGTaGTCAGGAAGCGCGTGCAATTCCAGGACAGCACAC +
Preference number: 6 (lower is better)
Translates to: QSPAGFSRARAW*SGSACNSRTAH
Trigger: GTGTGCTGTCCTGGAATTGCACGCGCTTCCTGACCACCAGGCTCTGGCCCTTGAGAAGCCAGCGGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509502.6
ENST00000677688.1
CDS TCA 72 bp GAGCAATGCGCTGGCAGGGACAGGAGACGGTGCTGCTaGCAGACATCACCCTGTGAGACATGGCTCCTAGGG +
Preference number: 6 (lower is better)
Translates to: EQCAGRDRRRCC*QTSPCETWLLG
Trigger: CCCTAGGAGCCATGTCTCACAGGGTGATGTCTGTCAGCAGCACCGTCTCCTGTCCCTGCCAGCGCATTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535116.1
CDS TCA 72 bp GTGCCTGAGGGTGGGCCACAGGGGCTGACAGAGCAGTaGCCCTGTGACTTAGTGCTAACCTGCCACACGGAT +
Preference number: 6 (lower is better)
Translates to: VPEGGPQGLTEQ*PCDLVLTCHTD
Trigger: ATCCGTGTGGCAGGTTAGCACTAAGTCACAGGGTCACTGCTCTGTCAGCCCCTGTGGCCCACCCTCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679213.1
ENST00000679321.1
CDS GCA 72 bp GGCCGAGGCTGGCCCGCTCCAAAAGTGGGGAATTCCTaGTTCGATTTGTGCTGGTGGAGAGGACGCTGTTCG +
Preference number: 6 (lower is better)
Translates to: GRGWPAPKVGNS*FDLCWWRGRCS
Trigger: CGAACAGCGTCCTCTCCACCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000377810.8
ENST00000402010.8
ENST00000408948.7
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000535116.1
ENST00000676602.1
ENST00000677688.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS CCA 72 bp GATGGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTaGGGAATTCCTGCTTCGATTTGTGCTGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: DGGLAEAGPLQK*GIPASICAGGE
Trigger: CTCTCCACCAGCACAAATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000408948.7
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000535116.1
ENST00000676602.1
ENST00000677303.1
ENST00000677688.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS CCA 72 bp ACCCTGGCATGGTTAGGCTGTCTTTGCCATTCTGGATaGAGGCCTGGCCGAGGCTGGCCCGCTCCAAAAGTG +
Preference number: 6 (lower is better)
Translates to: TLAWLGCLCHSG*RPGRGWPAPKV
Trigger: CACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGCCTAACCATGCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402010.8
ENST00000425897.3
ENST00000502399.7
ENST00000509502.6
ENST00000513765.7
ENST00000677688.1
CDS CCA 72 bp AAAGTAGCTAAGCAGCCAGGCCGAGCGGTTCCTGCCTaGGAACCTGGACGGTGTCGCAACCGAAACCACCAC +
Preference number: 6 (lower is better)
Translates to: KVAKQPGRAVPA*EPGRCRNRNHH
Trigger: GTGGTGGTTTCGGTTGCGACACCGTCCAGGTTCCCAGGCAGGAACCGCTCGGCCTGGCTGCTTAGCTACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509502.6
ENST00000512060.1
ENST00000677688.1
CDS CCA 72 bp GAAGGCAATGCAGGCCACTCCTCACGTGGGCAGCCATaGGAGAGATGGGATCTGAAGGCCCAGAGACCCTGT +
Preference number: 6 (lower is better)
Translates to: EGNAGHSSRGQP*ERWDLKAQRPC
Trigger: ACAGGGTCTCTGGGCCTTCAGATCCCATCTCTCCCATGGCTGCCCACGTGAGGAGTGGCCTGCATTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS CAA 90 bp CTCTGCTGCGTCTACCAAATCCAGCCCCAAAACAGCAGGCAGGTTTaGGCTGGGTGCCTCTACTGGAGGGAGTGTGAGCCCGTGTGCGTG +
Preference number: 6 (lower is better)
Translates to: LCCVYQIQPQNSRQV*AGCLYWRECEPVCV
Trigger: CACGCACACGGGCTCACACTCCCTCCAGTAGAGGCACCCAGCCAAAACCTGCCTGCTGTTTTGGGGCTGGATTTGGTAGACGCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 72 bp AGCCAGAGCAGGCGACACCTTCCACCACCTCCTCAGTaGAAAGTAGCTAAGCAGCCAGGCCGAGCGGTTCCT +
Preference number: 6 (lower is better)
Translates to: SQSRRHLPPPPQ*KVAKQPGRAVP
Trigger: AGGAACCGCTCGGCCTGGCTGCTTAGCTACTTTTCACTGAGGAGGTGGTGGAAGGTGTCGCCTGCTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509502.6
ENST00000512060.1
ENST00000677688.1
CDS GCA 72 bp CGTGCTACCCGGGATGGCATCAGGATGAGCCAGCCATaGCCTCTGCTGCGTCTACCAAATCCAGCCCCAAAA +
Preference number: 6 (lower is better)
Translates to: RATRDGIRMSQP*PLLRLPNPAPK
Trigger: TTTTGGGGCTGGATTTGGTAGACGCAGCAGAGGGCATGGCTGGCTCATCCTGATGCCATCCCGGGTAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 72 bp GTCCCAAGGTGGGCATCATCAGGCGCTGAGCTGGTGTaGAATCAGTTCTTCCCGTGCCATGCTCCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: VPRWASSGAELV*NQFFPCHAPGL
Trigger: AAGCCCAGGAGCATGGCACGGGAAGAACTGATTTCACACCAGCTCAGCGCCTGATGATGCCCACCTTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543674.1
CDS TCA 72 bp ACTCCTCACGTGGGCAGCCATGGGAGAGATGGGATCTaGAGGCCCAGAGACCCTGTGAGCTGTGCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: TPHVGSHGRDGI*RPRDPVSCAKL
Trigger: AAGCTTTGCACAGCTCACAGGGTCTCTGGGCCTTCAGATCCCATCTCTCCCATGGCTGCCCACGTGAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS GCA 72 bp GCTGGGTGCCTCTACTGGAGGGAGTGTGAGCCCGTGTaGGTGAATATTCAGAATCCGAGCTGCTGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: AGCLYWRECEPV*VNIQNPSCCLG
Trigger: ACCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACGGGCTCACACTCCCTCCAGTAGAGGCACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp TGTCTTTGCCATTCTGGATGGAGGCCTGGCCGAGGCTaGCCCGCTCCAAAAGTGGGGAATTCCTGCTTCGAT +
Preference number: 6 (lower is better)
Translates to: CLCHSGWRPGRG*PAPKVGNSCFD
Trigger: ATCGAAGCAGGAATTCCCCACTTTTGGAGCGGGCCAGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000350490.11
ENST00000361128.9
ENST00000402010.8
ENST00000408948.7
ENST00000425897.3
ENST00000502399.7
ENST00000508192.5
ENST00000509502.6
ENST00000513765.7
ENST00000535116.1
ENST00000676602.1
ENST00000677303.1
ENST00000677688.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS CAA 72 bp GTCTACCAAATCCAGCCCCAAAACAGCAGGCAGGTTTaGGCTGGGTGCCTCTACTGGAGGGAGTGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: VYQIQPQNSRQV*AGCLYWRECEP
Trigger: GGGCTCACACTCCCTCCAGTAGAGGCACCCAGCCAAAACCTGCCTGCTGTTTTGGGGCTGGATTTGGTAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 72 bp GAGTCAAGGTGTCCCAAGGTGGGCATCATCAGGCGCTaGGCTGGTGTGAAATCAGTTCTTCCCGTGCCATGC +
Preference number: 6 (lower is better)
Translates to: ESRCPKVGIIRR*AGVKSVLPVPC
Trigger: GCATGGCACGGGAAGAACTGATTTCACACCAGCTCAGCGCCTGATGATGCCCACCTTGGGACACCTTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543674.1
CDS TCA 72 bp GGTGCCTCTACTGGAGGGAGTGTGAGCCCGTGTGCGTaGATATTCAGAATCCGAGCTGCTGCCTTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: GASTGGSVSPCA*IFRIRAAALVQ
Trigger: CTGAACCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACGGGCTCACACTCCCTCCAGTAGAGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 72 bp GCAGACTCCAGAAGGCAGTGCACCTCGGGGAGAAGATaGCATGCTGGAAAGCAGTGCCTTGCTGTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: ADSRRQCTSGRR*HAGKQCLAVGE
Trigger: TTCCCCAACAGCAAGGCACTGCTTTCCAGCATGTCATCTTCTCCCCGAGGTGCACTGCCTTCTGGAGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS GCA 72 bp TGGTGGACTGGCGATTATTACGATGGCAGGCTAGACTaGTCCCAAGGCCAAATGGCCTACCCCACGCTGACT +
Preference number: 6 (lower is better)
Translates to: WWTGDYYDGRLD*SQGQMAYPTLT
Trigger: AGTCAGCGTGGGGTAGGCCATTTGGCCTTGGGAGCAGTCTAGCCTGCCATCGTAATAATCGCCAGTCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp AAGGTGTCCCAAGGTGGGCATCATCAGGCGCTGAGCTaGTGTGAAATCAGTTCTTCCCGTGCCATGCTCCTG +
Preference number: 6 (lower is better)
Translates to: KVSQGGHHQALS*CEISSSRAMLL
Trigger: CAGGAGCATGGCACGGGAAGAACTGATTTCACACCAGCTCAGCGCCTGATGATGCCCACCTTGGGACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543674.1
CDS TCA 72 bp ATGGGAGAGATGGGATCTGAAGGCCCAGAGACCCTGTaGGCTGTGCAAAGCTTCAGCATCAGGCCCAGGTTA +
Preference number: 6 (lower is better)
Translates to: MGEMGSEGPETL*AVQSFSIRPRL
Trigger: TAACCTGGGCCTGATGCTGAAGCTTTGCACAGCTCACAGGGTCTCTGGGCCTTCAGATCCCATCTCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS TCA 72 bp TTCTCCACCAATTTCAGGGCAGGGCTTCAATCAGCGTaGATAGGCTGGGCAGGAGGAAGGCAATGCAGGCCA +
Preference number: 6 (lower is better)
Translates to: FSTNFRAGLQSA*IGWAGGRQCRP
Trigger: TGGCCTGCATTGCCTTCCTCCTGCCCAGCCTATTCACGCTGATTGAAGCCCTGCCCTGAAATTGGTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS GCA 72 bp GCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGTGAGGTCTTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: AWPPEILPFLCR*RHCPPREVFWQ
Trigger: TTGCCAGAAGACCTCACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361128.9
ENST00000676602.1
ENST00000678482.1
ENST00000678662.1
ENST00000679216.1
ENST00000679321.1
CDS GCA 72 bp GCTTGGCCTCCCGAAATTCTTCCTTTTCTTTGTCGTTaGCGCCACTGCCCACCACGTGAGGTCTGCGTACAA +
Preference number: 6 (lower is better)
Translates to: AWPPEILPFLCR*RHCPPREVCVQ
Trigger: TTGTACGCAGACCTCACGTGGTGGGCAGTGGCGGCAACGACAAAGAAAAGGAAGAATTTCGGGAGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350490.11
ENST00000425897.3
CDS GCA 72 bp CTCCAGAAGGCAGTGCACCTCGGGGAGAAGATGACATaGTGGAAAGCAGTGCCTTGCTGTTGGGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: LQKAVHLGEKMT*WKAVPCCWGRR
Trigger: TCTTCTTCCCCAACAGCAAGGCACTGCTTTCCAGCATGTCATCTTCTCCCCGAGGTGCACTGCCTTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp CAAAACAGCAGGCAGGTTTTGGCTGGGTGCCTCTACTaGAGGGAGTGTGAGCCCGTGTGCGTGAATATTCAG +
Preference number: 6 (lower is better)
Translates to: QNSRQVLAGCLY*RECEPVCVNIQ
Trigger: CTGAATATTCACGCACACGGGCTCACACTCCCTCCAGTAGAGGCACCCAGCCAAAACCTGCCTGCTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CAA 90 bp TCACCAGAGAGGCAAGTGAAGTCAAATACCCTCGTACCCTCTAACTaGACCAGTCCGAGGCCTGCAATCCGGAGTGCCTTGGGGGATGAA +
Preference number: 6 (lower is better)
Translates to: SPERQVKSNTLVPSN*TSPRPAIRSALGDE
Trigger: TTCATCCCCCAAGGCACTCCGGATTGCAGGCCTCGGACTGGTCAAGTTAGAGGGTACGAGGGTATTTGACTTCACTTGCCTCTCTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CAA 90 bp ACAGCTGTGGAACTTTCAGCACTCTTCCCTGGGTCAGCTACCAGGTaGCCTGAAAGACTGAGAAAGCCTGGAGTGTGCCTGCCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: TAVELSALFPGSATR*PERLRKPGVCLPCL
Trigger: CAAGCAAGGCAGGCACACTCCAGGCTTTCTCAGTCTTTCAGGCAACCTGGTAGCTGACCCAGGGAAGAGTGCTGAAAGTTCCACAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS GCA 72 bp TGTGAGCCCGTGTGCGTGAATATTCAGAATCCGAGCTaGTGCCTTGGTTCAGTGACAGTACACACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: CEPVCVNIQNPS*CLGSVTVHTPA
Trigger: AGCTGGGGTGTGTACTGTCACTGAACCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACGGGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CAA 72 bp AGGCAAGTGAAGTCAAATACCCTCGTACCCTCTAACTaGACCAGTCCGAGGCCTGCAATCCGGAGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: RQVKSNTLVPSN*TSPRPAIRSAL
Trigger: CAAGGCACTCCGGATTGCAGGCCTCGGACTGGTCAAGTTAGAGGGTACGAGGGTATTTGACTTCACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS TCA 72 bp CAGTCCGAGGCCTGCAATCCGGAGTGCCTTGGGGGATaGACACACACACAGTTTATCCCATCTTTCGAGAAA +
Preference number: 6 (lower is better)
Translates to: QSEACNPECLGG*THTQFIPSFEK
Trigger: TTTCTCGAAAGATGGGATAAACTGTGTGTGTGTTCATCCCCCAAGGCACTCCGGATTGCAGGCCTCGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS GCA 72 bp ACCAGGTTGCCTGAAAGACTGAGAAAGCCTGGAGTGTaGCTGCCTTGCTTGGCAGCACTAAAAGGTGATGTG +
Preference number: 6 (lower is better)
Translates to: TRLPERLRKPGV*LPCLAALKGDV
Trigger: CACATCACCTTTTAGTGCTGCCAAGCAAGGCAGGCACACTCCAGGCTTTCTCAGTCTTTCAGGCAACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS CCA 72 bp CGTGTGCGTGAATATTCAGAATCCGAGCTGCTGCCTTaGTTCAGTGACAGTACACACCCCAGCTTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: RVREYSESELLP*FSDSTHPSLVC
Trigger: ACAGACCAAGCTGGGGTGTGTACTGTCACTGAACCAAGGCAGCAGCTCGGATTCTGAATATTCACGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp ACTGCTGCTACCTCAGCAAGCCCTTCTCTGAAGCTTTaGCTTGGGACAAATGTAGACAGGTGGCAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: TAATSASPSLKL*LGTNVDRWQRQ
Trigger: CTGCCTTTGCCACCTGTCTACATTTGTCCCAAGCCAAAGCTTCAGAGAAGGGCTTGCTGAGGTAGCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CCA 72 bp TGGAGATGGTATGTGTGTGCCTGCCTGCAAAGCAGCTaGGATACAGCTGTGGAACTTTCAGCACTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: WRWYVCACLQSS*DTAVELSALFP
Trigger: AGGGAAGAGTGCTGAAAGTTCCACAGCTGTATCCCAGCTGCTTTGCAGGCAGGCACACACATACCATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS CAA 72 bp GACTGCTGCTACCTCAGCAAGCCCTTCTCTGAAGCTTaGGCTTGGGACAAATGTAGACAGGTGGCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: DCCYLSKPFSEA*AWDKCRQVAKA
Trigger: TGCCTTTGCCACCTGTCTACATTTGTCCCAAGCCAAAGCTTCAGAGAAGGGCTTGCTGAGGTAGCAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CAA 72 bp AACTTGACCAGTCCGAGGCCTGCAATCCGGAGTGCCTaGGGGGATGAACACACACACAGTTTATCCCATCTT +
Preference number: 6 (lower is better)
Translates to: NLTSPRPAIRSA*GDEHTHSLSHL
Trigger: AAGATGGGATAAACTGTGTGTGTGTTCATCCCCCAAGGCACTCCGGATTGCAGGCCTCGGACTGGTCAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CAA 90 bp GTACCCTCTAACTTGACCAGTCCGAGGCCTGCAATCCGGAGTGCCTaGGGGGATGAACACACACACAGTTTATCCCATCTTTCGAGAAAG +
Preference number: 6 (lower is better)
Translates to: VPSNLTSPRPAIRSA*GDEHTHSLSHLSRK
Trigger: CTTTCTCGAAAGATGGGATAAACTGTGTGTGTGTTCATCCCCCAAGGCACTCCGGATTGCAGGCCTCGGACTGGTCAAGTTAGAGGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CAA 90 bp AGGTTGCCTGAAAGACTGAGAAAGCCTGGAGTGTGCCTGCCTTGCTaGGCAGCACTAAAAGGTGATGTGCCAAGAGGTGAAATGGCAGAG +
Preference number: 6 (lower is better)
Translates to: RLPERLRKPGVCLPC*AALKGDVPRGEMAE
Trigger: CTCTGCCATTTCACCTCTTGGCACATCACCTTTTAGTGCTGCCAAGCAAGGCAGGCACACTCCAGGCTTTCTCAGTCTTTCAGGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS CAA 90 bp ACTCAGCAGCCAAGAGACCCACAGGTGTCCTCAAACTTGAGTATCTaGGTGATGGAGATGGTATGTGTGTGCCTGCCTGCAAAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: TQQPRDPQVSSNLSI*VMEMVCVCLPAKQL
Trigger: CAGCTGCTTTGCAGGCAGGCACACACATACCATCTCCATCACCAAGATACTCAAGTTTGAGGACACCTGTGGGTCTCTTGGCTGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS TCA 72 bp GAAGTAGGTCAGACAGGTAGGCCAAGTGGCTGGGAATaGACAGAAAGACTTCACAAGAGCCAGTGCCTATGG +
Preference number: 6 (lower is better)
Translates to: EVGQTGRPSGWE*TERLHKSQCLW
Trigger: CCATAGGCACTGGCTCTTGTGAAGTCTTTCTGTTCATTCCCAGCCACTTGGCCTACCTGTCTGACCTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CAA 72 bp GAACTGAGGTTATTCATTCCCAGGTGCAGAAGGCCTTaGACTGCTGCTACCTCAGCAAGCCCTTCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: ELRLFIPRCRRP*TAATSASPSLK
Trigger: CTTCAGAGAAGGGCTTGCTGAGGTAGCAGCAGTCAAAGGCCTTCTGCACCTGGGAATGAATAACCTCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CAA 72 bp CCAAGAGACCCACAGGTGTCCTCAAACTTGAGTATCTaGGTGATGGAGATGGTATGTGTGTGCCTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PRDPQVSSNLSI*VMEMVCVCLPA
Trigger: TGCAGGCAGGCACACACATACCATCTCCATCACCAAGATACTCAAGTTTGAGGACACCTGTGGGTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS TCA 72 bp GCATGTCCGGAGAACAACTCATCCACTCTAATTCCATaGGCATCGCCCTCAACAACAATCCTCAGCCCTTAC +
Preference number: 6 (lower is better)
Translates to: ACPENNSSTLIP*ASPSTTILSPY
Trigger: GTAAGGGCTGAGGATTGTTGTTGAGGGCGATGCTCATGGAATTAGAGTGGATGAGTTGTTCTCCGGACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS GCA 72 bp TATCTTGGTGATGGAGATGGTATGTGTGTGCCTGCCTaGAAAGCAGCTGGGATACAGCTGTGGAACTTTCAG +
Preference number: 6 (lower is better)
Translates to: YLGDGDGMCVPA*KAAGIQLWNFQ
Trigger: CTGAAAGTTCCACAGCTGTATCCCAGCTGCTTTGCAGGCAGGCACACACATACCATCTCCATCACCAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS GCA 72 bp AACTTGAGTATCTTGGTGATGGAGATGGTATGTGTGTaGCTGCCTGCAAAGCAGCTGGGATACAGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: NLSILVMEMVCV*LPAKQLGYSCG
Trigger: TCCACAGCTGTATCCCAGCTGCTTTGCAGGCAGGCACACACATACCATCTCCATCACCAAGATACTCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679321.1
CDS CCA 72 bp GATGGTTTTATCATGGAGAACCAAGAGGCAACAACCTaGCTCCCACTCAAAGGCACAAGGAGAAGTGCATGC +
Preference number: 6 (lower is better)
Translates to: DGFIMENQEATT*LPLKGTRRSAC
Trigger: GCATGCACTTCTCCTTGTGCCTTTGAGTGGGAGCCAGGTTGTTGCCTCTTGGTTCTCCATGATAAAACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679213.1
ENST00000679321.1
CDS CAA 72 bp CCCGCAGCTCCTGCAGGAGGATCCAGGGTTAGAAAATaGAAATCACCCCAAGGCCAAAGGAAGAAACCTAAT +
Preference number: 6 (lower is better)
Translates to: PAAPAGGSRVRK*KSPQGQRKKPN
Trigger: ATTAGGTTTCTTCCTTTGGCCTTGGGGTGATTTCAATTTTCTAACCCTGGATCCTCCTGCAGGAGCTGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS TCA 72 bp CCGCAGCTCCTGCAGGAGGATCCAGGGTTAGAAAATTaGAATCACCCCAAGGCCAAAGGAAGAAACCTAATA +
Preference number: 6 (lower is better)
Translates to: PQLLQEDPGLEN*NHPKAKGRNLI
Trigger: TATTAGGTTTCTTCCTTTGGCCTTGGGGTGATTTCAATTTTCTAACCCTGGATCCTCCTGCAGGAGCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676602.1
CDS CCA 72 bp AGGGAGAAAAACAAGGTCAGGAATAAGATGGCTTGGTaGACTGGCGATTATTACGATGGCAGGCTAGACTGC +
Preference number: 6 (lower is better)
Translates to: REKNKVRNKMAW*TGDYYDGRLDC
Trigger: GCAGTCTAGCCTGCCATCGTAATAATCGCCAGTCCACCAAGCCATCTTATTCCTGACCTTGTTTTTCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CAA 90 bp GAAGTAGCTGCACGTGTTTCTAGTAGTGGCTACAAACATGTGTTTTaGCATAGGGCTGGCCACAAGCCAGAAGATAACAAGATGCAGGAA +
Preference number: 6 (lower is better)
Translates to: EVAARVSSSGYKHVF*HRAGHKPEDNKMQE
Trigger: TTCCTGCATCTTGTTATCTTCTGGCTTGTGGCCAGCCCTATGCAAAAACACATGTTTGTAGCCACTACTAGAAACACGTGCAGCTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp ATTAGGGAGAAAAACAAGGTCAGGAATAAGATGGCTTaGTGGACTGGCGATTATTACGATGGCAGGCTAGAC +
Preference number: 6 (lower is better)
Translates to: IREKNKVRNKMA*WTGDYYDGRLD
Trigger: GTCTAGCCTGCCATCGTAATAATCGCCAGTCCACCAAGCCATCTTATTCCTGACCTTGTTTTTCTCCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 72 bp GACACCCTGATGATGACAACAATGTTTCTACTGAACTaGAGAACCCTTGAAGGGATCCCAGGGGTAACAATA +
Preference number: 6 (lower is better)
Translates to: DTLMMTTMFLLN*RTLEGIPGVTI
Trigger: TATTGTTACCCCTGGGATCCCTTCAAGGGTTCTTCAGTTCAGTAGAAACATTGTTGTCATCATCAGGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS GCA 72 bp CACGTGTTTCTAGTAGTGGCTACAAACATGTGTTTTTaGATAGGGCTGGCCACAAGCCAGAAGATAACAAGA +
Preference number: 6 (lower is better)
Translates to: HVFLVVATNMCF*IGLATSQKITR
Trigger: TCTTGTTATCTTCTGGCTTGTGGCCAGCCCTATGCAAAAACACATGTTTGTAGCCACTACTAGAAACACGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS TCA 72 bp AAGAAAAAGGCTTTCCAATCCTCAGGAACCCAATGCTaGCCTTACCCTTTATTAGGGCCTAGGTTTTTCTTA +
Preference number: 6 (lower is better)
Translates to: KKKAFQSSGTQC*PYPLLGPRFFL
Trigger: TAAGAAAAACCTAGGCCCTAATAAAGGGTAAGGTCAGCATTGGGTTCCTGAGGATTGGAAAGCCTTTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1
CDS CCA 72 bp TGGTTTCCTCTCCGAGTTCTTAACACAATCCAGCAATaGTGTAAATTTTCTCCCTCATCTTCTCATCCTGAA +
Preference number: 6 (lower is better)
Translates to: WFPLRVLNTIQQ*CKFSPSSSHPE
Trigger: TTCAGGATGAGAAGATGAGGGAGAAAATTTACACCATTGCTGGATTGTGTTAAGAACTCGGAGAGGAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543674.1
CDS TCA 72 bp AGACTGGCTTTAGTAACAAAGAGTCTCAAAAGGTTTTaGAAATGGCTCTATTTGTCTGGTGTTGGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: RLALVTKSLKRF*KWLYLSGVGAF
Trigger: GAAGGCACCAACACCAGACAAATAGAGCCATTTTCAAAACCTTTTGAGACTCTTTGTTACTAAAGCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676602.1
ENST00000678482.1