RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166783

Ensembl transcript IDs: ENST00000396368.8, ENST00000540441.6, ENST00000546864.2, ENST00000547936.1, ENST00000548025.5, ENST00000548216.2, ENST00000549219.1, ENST00000549337.1, ENST00000551678.1, ENST00000551742.5, ENST00000551878.1, ENST00000552535.1, ENST00000552553.5, ENST00000552771.5, ENST00000621511.2, ENST00000631396.1, ENST00000631398.1, ENST00000631418.1, ENST00000631733.1, ENST00000632010.1, ENST00000632094.1, ENST00000632465.1, ENST00000632479.1, ENST00000632628.1, ENST00000633549.1, ENST00000633811.1, ENST00000633837.1, ENST00000634121.1

Found 2441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCCTGCTCTGTGTGACTGGGCCCTGGGCAAACAAGGAGGGCCGTaGCACCACAGGACCTCCACGCCCACCCCCAGCACACACCCTGGG +
Preference number: 1 (lower is better)
Translates to: APALCDWALGKQGGP*HHRTSTPTPSTHPG
Trigger: CCCAGGGTGTGTGCTGGGGGTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR GCA 90 bp CTGGGCCCACTGCCGTCAGCTCCAAGCTTGAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGGATGCGCTCGCCCTCCGAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: LGPLPSAPSLSSEAV*DSGTSRMRSPSEGW
Trigger: CCAGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGGCAGTGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 90 bp GTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTaGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCA +
Preference number: 1 (lower is better)
Translates to: VVGQAEKLLLCVTGP*ANKEGRDTTGPPRP
Trigger: TGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR GCA 90 bp TTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGACATACT +
Preference number: 1 (lower is better)
Translates to: LSRPPVELLPRAPPR*CGRRSWAAEFLRHT
Trigger: AGTATGTCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 90 bp GAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCC +
Preference number: 1 (lower is better)
Translates to: ENTLRTPRLPFSFGV*THRLAGQALLQRHA
Trigger: GGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CCA 90 bp CACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTaGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGAC +
Preference number: 1 (lower is better)
Translates to: HRLAGQALLQRHATH*VNTVGNTSKQRLRD
Trigger: GTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR TCA 90 bp AGCAACTGGGCAGTGAGAGATCGCAGAGACTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGG +
Preference number: 1 (lower is better)
Translates to: SNWAVRDRRDFRLIS*ICLPDSISATFTTW
Trigger: CCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 90 bp ACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGATaGCACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: TSKQRLRDSIMLHVG*HHRRGSMEAKPLPA
Trigger: AGCAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR GCA 90 bp GAGAGGAAGGCCATTCCACACCAGACGCCACAAGAAACCCAGAGATaGTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGACACGATT +
Preference number: 1 (lower is better)
Translates to: ERKAIPHQTPQETQR*FQQREVTRVKSDTI
Trigger: AATCGTGTCTGATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGCGTCTGGTGTGGAATGGCCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CCA 90 bp TGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGACATACTTaGTATAGGCCATGGAAAACTCATGAAGGAAAATCTGCTGGTAGT +
Preference number: 1 (lower is better)
Translates to: CCGRRSWAAEFLRHT*YRPWKTHEGKSAGS
Trigger: ACTACCAGCAGATTTTCCTTCATGAGTTTTCCATGGCCTATACCAAGTATGTCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 90 bp TCCAGTGAATGGTACTCAGACACACTCACGGGACAGCACAGAACTTaGTTCTTCTTTGTCTGTTGCCCAAAGAACCTGTTCTTTGAGTCT +
Preference number: 1 (lower is better)
Translates to: SSEWYSDTLTGQHRT*FFFVCCPKNLFFES
Trigger: AGACTCAAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCTGAGTACCATTCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR TCA 90 bp CAGCGAGAAGTAACGAGAGTAAAATCAGACACGATTAAAAGATGCTaGGCTGACATACACACACATAAAGCTTCCCAGCTACCGATACCA +
Preference number: 1 (lower is better)
Translates to: QREVTRVKSDTIKRC*ADIHTHKASQLPIP
Trigger: TGGTATCGGTAGCTGGGAAGCTTTATGTGTGTGTATGTCAGCTCAGCATCTTTTAATCGTGTCTGATTTTACTCTCGTTACTTCTCGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CCA 90 bp ATGGTGATAGGATGGGATGAAATGACTGATGGGTATGACACAAGATaGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGGAT +
Preference number: 1 (lower is better)
Translates to: MVIGWDEMTDGYDTR*LAFQQVNHFSTELD
Trigger: ATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATACCCATCAGTCATTTCATCCCATCCTATCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 90 bp GAATCTGCAATACATGAGGCACTGCTTCTAATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACACTCGGCACTGCTTTGCAAAATGAT +
Preference number: 1 (lower is better)
Translates to: ESAIHEALLLITQSA*SIRSLTLGTALQND
Trigger: ATCATTTTGCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCCAAGCTGATTGAGTTATTAGAAGCAGTGCCTCATGTATTGCAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 90 bp GAATCTCTGATACGATGTCAATCAACTCACAAACACCATATTCAGTaGCATCCCAGTCCTTTGAGAAACACCAGTGATAAGCCTGTGAGA +
Preference number: 1 (lower is better)
Translates to: ESLIRCQSTHKHHIQ*HPSPLRNTSDKPVR
Trigger: TCTCACAGGCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTCACTGAATATGGTGTTTGTGAGTTGATTGACATCGTATCAGAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 90 bp GCATATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAAC +
Preference number: 1 (lower is better)
Translates to: AYSVRRSVIIRQLSF*DRRSLTNWAARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR GCA 90 bp ATAGCAATTGGACTGGCCATTGTGGAGTACATTATGAACACAATGTaGTTCCGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAG +
Preference number: 1 (lower is better)
Translates to: IAIGLAIVEYIMNTM*FRSLLSHFQTAIVK
Trigger: CTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCGGAAGCACATTGTGTTCATAATGTACTCCACAATGGCCAGTCCAATTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR TCA 90 bp TACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCAGCCTTATaGAATCTTAGAATAAGGCAACTGATGTTCTCAACACCAATTATT +
Preference number: 1 (lower is better)
Translates to: YMLAELKSKRANSAL*NLRIRQLMFSTPII
Trigger: AATAATTGGTGTTGAGAACATCAGTTGCCTTATTCTAAGATTTCATAAGGCTGAGTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR GCA 90 bp TATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTaGCTCTCGACACACAATAATGTGTGTTGTAATCCAAATGCTGAC +
Preference number: 1 (lower is better)
Translates to: YALDAYFRKSGSFQC*LSTHNNVCCNPNAD
Trigger: GTCAGCATTTGGATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR TCA 90 bp CACACAATAATGTGTGTTGTAATCCAAATGCTGACTTTAAATCCATaGCATCGAGACCATCTCCTTTTCCTTAACCTAACCCATATCAAA +
Preference number: 1 (lower is better)
Translates to: HTIMCVVIQMLTLNP*HRDHLLFLNLTHIK
Trigger: TTTGATATGGGTTAGGTTAAGGAAAAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAGCATTTGGATTACAACACACATTATTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR GCA 90 bp ATTTATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATaGTGCCTCTCGACACACAATAATGTGTGTTGTAATCCAAATGCT +
Preference number: 1 (lower is better)
Translates to: IYALDAYFRKSGSFQ*CLSTHNNVCCNPNA
Trigger: AGCATTTGGATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGAGCTCCTGCTCTGTGTaGCTGGGCCCTGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRSSCSV*LGPGQT
Trigger: TGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCT...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR-3UTR TCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTAAACAAGGAGGGCCGTaGCACCACAGGACCTCCACG +
Preference number: 2 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSKQGGP*HHRTST
Trigger: CGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAGCTCCTGCTCTGTGTaGCTGGGCCCTGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSSCSV*LGPGQT
Trigger: TGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR-3UTR TCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCCTGCTCTGTGTGACTaGGCCCTGGGCAAACAAGGA +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTPALCD*ALGKQG
Trigger: TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR-3UTR TCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 2 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 2 (lower is better)
Translates to: DELESEVRVLLFPGIGISGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR TCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 2 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 2 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 2 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR TCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 2 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR GCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 2 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR GCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 2 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 2 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 2 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: THRLAGQALLQRHATHWVMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR GCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 2 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: THRLAGQALLQRHATHWVTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 2 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 2 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 2 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: THRLAGQALLQRHATHWVRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 2 (lower is better)
Translates to: THRLAGQALLQRHATHWVMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 2 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDARSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 2 (lower is better)
Translates to: RRSLTNWAARALNRSTSVGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCACCTGCTCTGTGTGACTaGGCCCTGGGCAAACAAGGA +
Preference number: 2 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPPALCD*ALGKQG
Trigger: TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGG...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 2 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 2 (lower is better)
Translates to: LLLWCVNTQASGTGFASKMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 2 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LLLWCVNTQASGTGFASKPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 2 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR GCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 2 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 2 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 2 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 2 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATTGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 2 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 2 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLVGTSR*LCLESL
Trigger: CAGAGATTCCAGACACAACCATCTGCTTGTCCCAAC...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: NQALSNAASRHTIMCVVIMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 2 (lower is better)
Translates to: DRRSLTNWAARALNRSTSRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 2 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCAGGCTCTTTCCAATaGTGCCTCTCGACACACAAT +
Preference number: 2 (lower is better)
Translates to: ATRNPEMLPTARSNESKISGSFQ*CLSTHN
Trigger: ATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: NQALSNAASRHTIMCVVITDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 2 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 2 (lower is better)
Translates to: DRRSLTNWAARALNRSTSECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: MHLMHILENQALSNAASRMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCTTCACATTCCAACCTaGAAATACACTCCGAACCCC +
Preference number: 2 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLHIPT*KYTPNP
Trigger: GGGGTTCGGAGTGTATTTTCAGGTTGGAATGTGAAG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGGCTCTTTCCAATGCTaGCTCTCGACACACAATAAT +
Preference number: 2 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKGSFQC*LSTHNN
Trigger: ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCAGGCTCTTTCCAATaGTGCCTCTCGACACACAAT +
Preference number: 2 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSGSFQ*CLSTHN
Trigger: ATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR GCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 2 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 2 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 2 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGA +
Preference number: 2 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNFSFGV*THRLAG
Trigger: TCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCTGACTTTAAATCCATaGCATCGAGACCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: ATRNPEMLPTARSNESKILTLNP*HRDHLL
Trigger: AAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 2 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 2 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCAAGAAACCCAGAGATaGTTCCAACAGCGAGAAGTA +
Preference number: 2 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLQETQR*FQQREV
Trigger: TACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR GCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACCACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 2 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 2 (lower is better)
Translates to: NQALSNAASRHTIMCVVIRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCACTTACAAGTCACATaGAAGCCAGGAACCTTCACA +
Preference number: 2 (lower is better)
Translates to: LKSTTLYMLAELKSKRANHLQVT*KPGTFT
Trigger: TGTGAAGGTTCCTGGCTTCCATGTGACTTGTAAGTG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 2 (lower is better)
Translates to: RNGTDIIVLETKCITKSFFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 2 (lower is better)
Translates to: RNGTDIIVLETKCITKSFVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCTCCCCACTCAGCTCTaGTTTGTAATTTATGCACTT +
Preference number: 2 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLPTQL*FVIYAL
Trigger: AAGTGCATAAATTACAAATCAGAGCTGAGTGGGGAG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGGAGGATTCGGAGAGTaGCATAATACTTACAGGGTT +
Preference number: 2 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVGGFGE*HNTYRV
Trigger: AACCCTGTAAGTATTATGGCACTCTCCGAATCCTCC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR GCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 2 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCCATGTGTTGAGAACTaGGAGTCACTGGCTTCATTT +
Preference number: 2 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVPCVEN*ESLASF
Trigger: AAATGAAGCCAGTGACTCCCAGTTCTCAACACATGG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CAA 90 bp ATGGTAAGAAGGGATAAATTTATTAAAGGGCATCCGGAAATGGGGTaGGTGACGCAGCAAATCAACGACATCCTTGGAGAACTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: MVRRDKFIKGHPEMG*VTQQINDILGELFC
Trigger: ACAAAACAGTTCTCCAAGGATGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTTATCCCTTCTTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCATGCTGGCCTGGGATTTaGGAAGTTTTAGTAAATCCT +
Preference number: 2 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWACWPGI*EVLVNP
Trigger: AGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCA...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 2 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 2 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR TCA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGTGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 2 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCAGAGTCCATTTTCTaGCTTTCTAGAAGTTACCAA +
Preference number: 2 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSESIF*LSRSYQ
Trigger: TTGGTAACTTCTAGAAAGCCAGAAAATGGACTCTGA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGAACTGGGAGTCACTaGCTTCATTTAAAAGATTTG +
Preference number: 2 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRTGSH*LHLKDL
Trigger: CAAATCTTTTAAATGAAGCCAGTGACTCCCAGTTCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR CAA 90 bp ACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGAACCTGTTCTTaGAGTCTGTTCCAGGTGACTTGTAATGATACCTCTTACGGTTTT +
Preference number: 2 (lower is better)
Translates to: TELDSSLSVAQRTCS*SLFQVTCNDTSYGF
Trigger: AAAACCGTAAGAGGTATCATTACAAGTCACCTGGAACAGACTCAAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 90 bp GGATACAAATCACCATTTCATTATCTTGTTGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATACGATGTCAATCAACTCACAAACAC +
Preference number: 2 (lower is better)
Translates to: GYKSPFHYLVGTSRW*CLESLIRCQSTHKH
Trigger: GTGTTTGTGAGTTGATTGACATCGTATCAGAGATTCCAGACACAACCATCTGCTTGTCCCAACAAGATAATGAAATGGTGATTTGTATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTCTTCTTTGTCTGTTaGCCAAAGAACCTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVFFFVC*PKNLFF
Trigger: AAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 2 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWASFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp TTTGGCCGGGCTTTCCACGGGGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGAGGGGCAGGGAGGCAC +
Preference number: 3 (lower is better)
Translates to: FGRAFHGVLAEQ*LGGFRGGAGRH
Trigger: GTGCCTCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAGCCCGGCCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR GCA 72 bp CTGCCGTCAGCTCCAAGCTTGAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGGATGCGCTCGCCCTCC +
Preference number: 3 (lower is better)
Translates to: LPSAPSLSSEAV*DSGTSRMRSPS
Trigger: GGAGGGCGAGCGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 72 bp CAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTaGGCAAACAAGGAGGGCCGTGACACCACAGGACCT +
Preference number: 3 (lower is better)
Translates to: QAEKLLLCVTGP*ANKEGRDTTGP
Trigger: AGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
3UTR-3UTR CAA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGATGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 3 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR GCA 72 bp GTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCTGGTTTTCATGATTGG +
Preference number: 3 (lower is better)
Translates to: VPRLCAIRAPPG*ARPPRAGFHDW
Trigger: CCAATCATGAAAACCAGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTRPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR GCA 72 bp CCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: PPVELLPRAPPR*CGRRSWAAEFL
Trigger: GAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 3 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR TCA 72 bp CTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGACAGGCTTTGCTTCAA +
Preference number: 3 (lower is better)
Translates to: LRTPRLPFSFGV*THRLAGQALLQ
Trigger: TTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR TCA 72 bp TCCAGGATGCGCTCGCCCTCCGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTGAGTGAACTCAAACGA +
Preference number: 3 (lower is better)
Translates to: SRMRSPSEGWFS*LAGERLSELKR
Trigger: TCGTTTGAGTTCACTCAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTCGGAGGGCGAGCGCATCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 72 bp CCAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGACATACTTGGTATAGG +
Preference number: 3 (lower is better)
Translates to: PRAPPRCCGRRS*AAEFLRHTWYR
Trigger: CCTATACCAAGTATGTCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CAA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 3 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDATLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 3 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 3 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp TCACACACACGTCCCAGACCTAAGCAGCAACTCCAGTaGATGGTACTCAGACACACTCACGGGACAGCACAG +
Preference number: 3 (lower is better)
Translates to: SHTRPRPKQQLQ*MVLRHTHGTAQ
Trigger: CTGTGCTGTCCCGTGAGTGTGTCTGAGTACCATTCACTGGAGTTGCTGCTTAGGTCTGGGACGTGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CCA 72 bp AAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCTAGCGGGACAGGCTTT +
Preference number: 3 (lower is better)
Translates to: KYTPNPSPTLLL*CVNTQASGTGF
Trigger: AAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 3 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 72 bp ACACACGTCCCAGACCTAAGCAGCAACTCCAGTGAATaGTACTCAGACACACTCACGGGACAGCACAGAACT +
Preference number: 3 (lower is better)
Translates to: THVPDLSSNSSE*YSDTLTGQHRT
Trigger: AGTTCTGTGCTGTCCCGTGAGTGTGTCTGAGTACCATTCACTGGAGTTGCTGCTTAGGTCTGGGACGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CAA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGAACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 3 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 72 bp GCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTaGGTTAATACTGTCGGAAACACCAGTAAGCAAAGG +
Preference number: 3 (lower is better)
Translates to: AGQALLQRHATH*VNTVGNTSKQR
Trigger: CCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 3 (lower is better)
Translates to: ATRNPEMLPTARSNESKILAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGACTGGGGCCATGTGTaGAGAACTGGGAGTCACTGG +
Preference number: 3 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVDWGHV*RTGSHW
Trigger: CCAGTGACTCCCAGTTCTCAACACATGGCCCCAGTC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp CAAAGGCTGAGAGACTCTATTATGCTACATGTAGGATaGCACCACCGACGTGGCTCAATGGAAGCAAAACCG +
Preference number: 3 (lower is better)
Translates to: QRLRDSIMLHVG*HHRRGSMEAKP
Trigger: CGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAGTCTCTCAGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR TCA 72 bp GCAGTGAGAGATCGCAGAGACTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCTATATCGGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: AVRDRRDFRLIS*ICLPDSISATF
Trigger: GAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGCGATCTCTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR GCA 72 bp GCCATTCCACACCAGACGCCACAAGAAACCCAGAGATaGTTCCAACAGCGAGAAGTAACGAGAGTAAAATCA +
Preference number: 3 (lower is better)
Translates to: AIPHQTPQETQR*FQQREVTRVKS
Trigger: TGATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGCGTCTGGTGTGGAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCCAGTGGAAATCGTATaGATCCCGCTGCTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLPVEIV*IPLLLK
Trigger: CTTCAGCAGCAGCGGGATCAATACGATTTCCACTGG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: RRSLTNWAARALNRSTSVNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 3 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGCCTACCCTTCTCCTTaGGTGTGTGAACACACAGGC +
Preference number: 3 (lower is better)
Translates to: MHLMHILENQALSNAASRAYPSP*VCEHTG
Trigger: GCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCATCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 3 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
3UTR-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 3 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 3 (lower is better)
Translates to: DRRSLTNWAARALNRSTSHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp TGGTACTCAGACACACTCACGGGACAGCACAGAACTTaGTTCTTCTTTGTCTGTTGCCCAAAGAACCTGTTC +
Preference number: 3 (lower is better)
Translates to: WYSDTLTGQHRT*FFFVCCPKNLF
Trigger: GAACAGGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCTGAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTAAGTGGATCAACCTaGGCCTTCCTATGTGTAGGT +
Preference number: 3 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLSGST*AFLCVG
Trigger: ACCTACACATAGGAAGGCCAAGGTTGATCCACTTAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 3 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 3 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 72 bp ATACATGAGGCACTGCTTCTAATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACACTCGGCACTGCTTTG +
Preference number: 3 (lower is better)
Translates to: IHEALLLITQSA*SIRSLTLGTAL
Trigger: CAAAGCAGTGCCGAGTGTCAGACTACGGATACTCCAAGCTGATTGAGTTATTAGAAGCAGTGCCTCATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 3 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 3 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 3 (lower is better)
Translates to: CQILYRQPSRHGRVSELKGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp ATCCCGCTGCTGCTGAAGCACCTCCCCACTCAGCTCTaGTTTGTAATTTATGCACTTGATGCATATTTTAGA +
Preference number: 3 (lower is better)
Translates to: IPLLLKHLPTQL*FVIYALDAYFR
Trigger: TCTAAAATATGCATCAAGTGCATAAATTACAAATCAGAGCTGAGTGGGGAGGTGCTTCAGCAGCAGCGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR GCA 72 bp GGACTGGCCATTGTGGAGTACATTATGAACACAATGTaGTTCCGAAGTCTTCTCTCTCATTTTCAGACAGCA +
Preference number: 3 (lower is better)
Translates to: GLAIVEYIMNTM*FRSLLSHFQTA
Trigger: TGCTGTCTGAAAATGAGAGAGAAGACTTCGGAAGCACATTGTGTTCATAATGTACTCCACAATGGCCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CCA 72 bp GGATGGGATGAAATGACTGATGGGTATGACACAAGATaGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACT +
Preference number: 3 (lower is better)
Translates to: GWDEMTDGYDTR*LAFQQVNHFST
Trigger: AGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATACCCATCAGTCATTTCATCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 3 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 3 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp ATAAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACATCCTTGGAGAACTGT +
Preference number: 3 (lower is better)
Translates to: INLLKGIRKWGW*RSKSTTSLENC
Trigger: ACAGTTCTCCAAGGATGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CCA 72 bp GTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACAAACTGGGCAGCTAGA +
Preference number: 3 (lower is better)
Translates to: VRRSVIIRQLSF*DRRSLTNWAAR
Trigger: TCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 3 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCATTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 3 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWALLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 3 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp TTGTTGGGACAAGCAGATGGTTGTGTCTGGAATCTCTaGTACGATGTCAATCAACTCACAAACACCATATTC +
Preference number: 3 (lower is better)
Translates to: LLGQADGCVWNL*YDVNQLTNTIF
Trigger: GAATATGGTGTTTGTGAGTTGATTGACATCGTATCAGAGATTCCAGACACAACCATCTGCTTGTCCCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 3 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR-3UTR CAA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: RNGTDIIVLETKCITKSFDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR TCA 72 bp GTAACGAGAGTAAAATCAGACACGATTAAAAGATGCTaGGCTGACATACACACACATAAAGCTTCCCAGCTA +
Preference number: 3 (lower is better)
Translates to: VTRVKSDTIKRC*ADIHTHKASQL
Trigger: TAGCTGGGAAGCTTTATGTGTGTGTATGTCAGCTCAGCATCTTTTAATCGTGTCTGATTTTACTCTCGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGATGAAGCCACTTTaGTCAACTACAGACATAGTT +
Preference number: 3 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNVMKPL*STTDIV
Trigger: AACTATGTCTGTAGTTGACAAAAGTGGCTTCATCAC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR TCA 72 bp ATGTGTGTTGTAATCCAAATGCTGACTTTAAATCCATaGCATCGAGACCATCTCCTTTTCCTTAACCTAACC +
Preference number: 3 (lower is better)
Translates to: MCVVIQMLTLNP*HRDHLLFLNLT
Trigger: GGTTAGGTTAAGGAAAAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAGCATTTGGATTACAACACACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CCA 72 bp AAATCACCATTTCATTATCTTGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTGATACGATGTCAATCA +
Preference number: 3 (lower is better)
Translates to: KSPFHYLVGTSR*LCLESLIRCQS
Trigger: TGATTGACATCGTATCAGAGATTCCAGACACAACCATCTGCTTGTCCCAACAAGATAATGAAATGGTGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR GCA 72 bp CTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATaGTGCCTCTCGACACACAATAATGTGTGTTGTAAT +
Preference number: 3 (lower is better)
Translates to: LDAYFRKSGSFQ*CLSTHNNVCCN
Trigger: ATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGEGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVREPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp CCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACCCCCAGCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PGQTRRAVTPQDLHAHPQHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...CTGGGGGTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR GCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGTTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCATGTGTGACTGGGCCCTaGGCAAACAAGGAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: TGPWANKEGRDTTGPPRPCVTGP*ANKEGR
Trigger: ACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACA...TGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCATTCTTCCACCCTCTaGCGCCGGCTCCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHSSTL*RRLHLR
Trigger: GCGGAGGTGGAGCCGGCGGCAGAGGGTGGAAGAATG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGTCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRSPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTCCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TGTGTGACTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCAAAACAAGGAGGGCCGTaGCACCACAGGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: CVTGPWANKEGRDTTGPPKQGGP*HHRTST
Trigger: CGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTT...TGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp CGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTGGGCAAACAAGGAAAACAAGGAGGGCCGTaGCACCACAGGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: RSGGEAPALCDWALGKQGKQGGP*HHRTST
Trigger: CGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTT...TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp CGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTGGGCAAACAAGGAAGCTCCTGCTCTGTGTaGCTGGGCCCTGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: RSGGEAPALCDWALGKQGSSCSV*LGPGQT
Trigger: TGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCT...TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp TGTGTGACTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCAAGCTCCTGCTCTGTGTaGCTGGGCCCTGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: CVTGPWANKEGRDTTGPPSSCSV*LGPGQT
Trigger: TGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCT...TGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp CCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACCCCCAGCCCTGGGCTCACACCTaGAGTTTTCCTTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGQTRRAVTPQDLHAHPQPWAHT*SFPSKP
Trigger: TGGCTTAGAAGGAAAACTTCAGGTGTGAGCCCAGGG...CTGGGGGTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR GCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLLSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGEPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGATTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACCTGCTCTGTGTGACTaGGCCCTGGGCAAACAAGGA +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGPALCD*ALGKQG
Trigger: TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAACAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGEQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDARAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGTGGCTTTGGCACTaGAAGATTGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQAWLWH*KIVHLH
Trigger: ATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGC...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTTCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSSPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGCCAAGGGTCAGTGTTaGGAGGCGGGGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGAKGQC*EAGACC
Trigger: ACAACAAGCCCCCGCCTCCCAACACTGACCCTTGGC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
3UTR CAA 72 bp TTGGGTTGCTTTTTGGCCGGGCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGCFLAGLSTGS*LSSDSEVSEEG
Trigger: CCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGEAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCATTCTTCCACCCTCTaGCGCCGGCTCCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVHSSTL*RRLHLR
Trigger: GCGGAGGTGGAGCCGGCGGCAGAGGGTGGAAGAATG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGTTCGCTGCTCGAATTTaGAATGTTGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRFAARI*NVESKR
Trigger: CCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAA...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDALANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGCGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDARLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGEKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGEVGTSR*LCLESL
Trigger: CAGAGATTCCAGACACAACCATCTGCTTGTCCCAAC...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACCCCCAGATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGQTRRAVTPQDLHAHPQMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...CTGGGGGTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLLLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCTTCGCTGCTCGAATTTaGAATGTTGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLFAARI*NVESKR
Trigger: CCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAA...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGCGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRRAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGTTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDALGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCATGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTGGAAAGCAAACCCTaGCCCTACCTGACACGTGAT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLESKP*PYLTRD
Trigger: ATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTCCAGTGATAAGCCTGTaGGAATTCTCTCACAATGAC +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSPVISL*EFSHND
Trigger: GTCATTGTGAGAGAATTCTCACAGGCTTATCACTGG...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAATGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGECVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCATGGTGTTCTGTCTTaGCTGGGGCCATGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHGVLS*LGPCVE
Trigger: CTCAACACATGGCCCCAGTCAAGACAGAACACCATG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAATGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGECRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGICKWV*AVGFAA
Trigger: AGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPSTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGCCAAGGGTCAGTGTTaGGAGGCGGGGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVAKGQC*EAGACC
Trigger: ACAACAAGCCCCCGCCTCCCAACACTGACCCTTGGC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGAACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCAATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVARKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCATTCTTCCACCCTCTaGCGCCGGCTCCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAHSSTL*RRLHLR
Trigger: GCGGAGGTGGAGCCGGCGGCAGAGGGTGGAAGAATG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGNLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTLLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCATTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCCGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSRAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGACAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGAGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp TGTGTGACTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCAATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: CVTGPWANKEGRDTTGPPMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...TGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCTCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSSNLQC*KQAGML
Trigger: GAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGA...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTTCACATTCCAACCTaGAAATACACTCCGAACCCC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLHIPT*KYTPNP
Trigger: GGGGTTCGGAGTGTATTTTCAGGTTGGAATGTGAAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAAGCAGCAACTCCAGTaGATGGTACTCAGACACACT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGKQQLQ*MVLRHT
Trigger: AGTGTGTCTGAGTACCATTCACTGGAGTTGCTGCTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVARDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCAATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVANLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDASRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGERPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDATTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNEPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGVGTSR*LCLESL
Trigger: CAGAGATTCCAGACACAACCATCTGCTTGTCCCAAC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGAACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCATGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPCHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCATGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGAGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGCGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACTGGGGCCATGTGTTaGGAACTGGGAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTGAMC*ELGVTG
Trigger: GCCAGTGACTCCCAGTTCTCAACACATGGCCCCAGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTCGCTGCTCGAATTTaGAATGTTGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFAARI*NVESKR
Trigger: CCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVRAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACGGGCACCTCCAGGATaGGCTCGCCCTCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRAPPG*ARPPRA
Trigger: AGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLSSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGTGTGACTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: CVTGPWANKEGRDTTGPPQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...TGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVICKWV*AVGFAA
Trigger: AGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTACWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGCHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCTGTGTGACTGGGCCCTaGGCAAACAAGGAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLCVTGP*ANKEGR
Trigger: ACGGCCCTCCTTGTTTGCCCAGGGCCCAGTCACACA...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGCCTGCTCTGTGTGACTaGGCCCTGGGCAAACAAGGA +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWPALCD*ALGKQG
Trigger: TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGG...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGACTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGLEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCACACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGCSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGGCTCTGGCGGGCCTaGCTGCTGGGTAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVGLWRA*LLGRRH
Trigger: GTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGAGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGACCCTGGGCTCACACCTaGAGTTTTCCTTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGPWAHT*SFPSKP
Trigger: TGGCTTAGAAGGAAAACTTCAGGTGTGAGCCCAGGG...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVNLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGACTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGLFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCATCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGCTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIEPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKEPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTACAGCCATGCAAAGTaGTTCAACATCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGYSHAK*FNILSS
Trigger: AGATGAAAGGATGTTGAATCACTTTGCATGGCTGTA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTANSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTATLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTGGAAAGCAAACCCTaGCCCTACCTGACACGTGAT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLESKP*PYLTRD
Trigger: ATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTCTGGAAAGCAAACCCTaGCCCTACCTGACACGTGAT +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSLESKP*PYLTRD
Trigger: ATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAG...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGAGGAGCCGTCGTGTaGCTGGGAAGACCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVGGAVV*LGRPQG
Trigger: CCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTCGTAATGTCTCTTaGGCTCCTCAACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFRNVS*APQQKD
Trigger: ATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFSFGV*THRLAG
Trigger: TCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCATTCTTCCACCCTCTaGCGCCGGCTCCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVHSSTL*RRLHLR
Trigger: GCGGAGGTGGAGCCGGCGGCAGAGGGTGGAAGAATG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCCATCATACAGCCATaGAAAGTGATTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSIIQP*KVIQHP
Trigger: AGGATGTTGAATCACTTTGCATGGCTGTATGATGGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGACTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGAGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGDISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVARSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSLSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSEPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGCCAAGGGTCAGTGTTaGGAGGCGGGGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKAKGQC*EAGACC
Trigger: ACAACAAGCCCCCGCCTCCCAACACTGACCCTTGGC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCAGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGTATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCCTGCTCTGTGTGACTaGGCCCACTGCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSPALCD*AHCRQL
Trigger: GAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGCAACTCCAGTGAATaGTACTCAGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSNSSE*YSDTLT
Trigger: CGTGAGTGTGTCTGAGTACCATTCACTGGAGTTGCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: YPDHLWNCSQELLHAAVACILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGGAAAGCAAACCCTaGCCCTACCTGACACGTGAT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALESKP*PYLTRD
Trigger: ATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLHNSSC*PARGNG
Trigger: TCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTTCTATGACCAGTTTTTaGCTCCATGCGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSSMTSF*LHAAQL
Trigger: GAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGA...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATCAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGGGTCTGGTCTCAGCTaGGGGGACGGCAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNGSGLS*GDGRHE
Trigger: CTCGTGCCTGCCGTCCCCTCAGCTGAGACCAGACCC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACGGGGACAGCTGCTaGGATGCAGGACGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHGDSC*DAGRAG
Trigger: TCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFSFGV*THRLAG
Trigger: TCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCACTGGGGCCATGTGTTaGGAACTGGGAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKITGAMC*ELGVTG
Trigger: GCCAGTGACTCCCAGTTCTCAACACATGGCCCCAGT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAACTGGGGCCATGTGTTaGGAACTGGGAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKTGAMC*ELGVTG
Trigger: GCCAGTGACTCCCAGTTCTCAACACATGGCCCCAGT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACATTCTTCCACCCTCTaGCGCCGGCTCCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRHSSTL*RRLHLR
Trigger: GCGGAGGTGGAGCCGGCGGCAGAGGGTGGAAGAATG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKDISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSGGPD*WVGDTP
Trigger: TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCCAACAGGTTCTTTCTaGTCTATGAATGAATCCGCC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVPTGSF*SMNESA
Trigger: GGCGGATTCATTCATAGAGCAGAAAGAACCTGTTGG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDAEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGAGCCGTCGTGTGACTaGGAAGACCCCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMEPSCD*EDPKGL
Trigger: GAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTTATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGCACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTANLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACGTCAGCTCCAAGCTTaGGTTCCGAGGCTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRQLQA*VPRLCA
Trigger: CGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTGACTTTAAATCCATaGCATCGAGACCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLTLNP*HRDHLL
Trigger: AAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAAGCAGCAACTCCAGTaGATGGTACTCAGACACACT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVKQQLQ*MVLRHT
Trigger: AGTGTGTCTGAGTACCATTCACTGGAGTTGCTGCTT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTANLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTADISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCAGGCTCTTTCCAATaGTGCCTCTCGACACACAAT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSGSFQ*CLSTHN
Trigger: ATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVTTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGCTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVCRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGCGTGGCTTTGGCACTaGAAGATTGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKAWLWH*KIVHLH
Trigger: ATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCWQPR*QVRPGS
Trigger: AGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNGGPDC*VGDTPA
Trigger: GGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCCAAGGGTCAGTGTTaGGAGGCGGGGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMAKGQC*EAGACC
Trigger: ACAACAAGCCCCCGCCTCCCAACACTGACCCTTGGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCCAAGGGTCAGTGTTaGGAGGCGGGGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVAKGQC*EAGACC
Trigger: ACAACAAGCCCCCGCCTCCCAACACTGACCCTTGGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKVGTSR*LCLESL
Trigger: CAGAGATTCCAGACACAACCATCTGCTTGTCCCAAC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGAGGATAACGGGGTCTaGTCTCAGCTGAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMEDNGV*SQLRGR
Trigger: CCGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAICKWV*AVGFAR
Trigger: TCTAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540441.6
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDNSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCCACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCTTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCACTTGAGTTACCGTaGGTGGGTACGACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMALELP*VGTTSL
Trigger: GAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGTCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRSNLQC*KQAGML
Trigger: GAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGA...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCCAGTGATAAGCCTGTaGGAATTCTCTCACAATGAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKPVISL*EFSHND
Trigger: GTCATTGTGAGAGAATTCTCACAGGCTTATCACTGG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTADIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGATGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGTCCTTGCTGAGCAGTaGCTCGGAGGTTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVVLAEQ*LGGFRG
Trigger: TCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGAC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACGATTAAAAGATGCTaGGCTGACATACACACACAT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVTIKRC*ADIHTH
Trigger: ATGTGTGTGTATGTCAGCTCAGCATCTTTTAATCGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACATGGTGTTCTGTCTTaGCTGGGGCCATGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKHGVLS*LGPCVE
Trigger: CTCAACACATGGCCCCAGTCAAGACAGAACACCATG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACATGGTGTTCTGTCTTaGCTGGGGCCATGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHGVLS*LGPCVE
Trigger: CTCAACACATGGCCCCAGTCAAGACAGAACACCATG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTGTGGAGTACATTATaGACACAATGTGCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVLWSTL*TQCASE
Trigger: TTCGGAAGCACATTGTGTTCATAATGTACTCCACAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTANRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLNLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTCGCTGCTCGAATTTaGAATGTTGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFAARI*NVESKR
Trigger: CCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTGGCAAATGCTTCCTaGAGGAGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLANAS*RSCCSS
Trigger: GGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCCTCCTTGGTTTTCTTaGACTACTTCTAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKPPWFS*TTSRSP
Trigger: TGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAGTTCCGAGGCTGTGTaGGATTCGGGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRSSEAV*DSGTSR
Trigger: CCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGAGGATTCGGAGAGTaGCATAATACTTACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGGFGE*HNTYRV
Trigger: AACCCTGTAAGTATTATGGCACTCTCCGAATCCTCC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCCGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHTTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGCTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTATSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCATTCACCTGGGCCCTGTaGGTAAGGGTCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAFTWAL*VRVSRR
Trigger: ACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAA...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLVGTSR*LCLESL
Trigger: CAGAGATTCCAGACACAACCATCTGCTTGTCCCAAC...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTANLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKITDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCACTTACAAGTCACATaGAAGCCAGGAACCTTCACA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVHLQVT*KPGTFT
Trigger: TGTGAAGGTTCCTGGCTTCCATGTGACTTGTAAGTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGCAACTCCAGTGAATaGTACTCAGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASNSSE*YSDTLT
Trigger: CGTGAGTGTGTCTGAGTACCATTCACTGGAGTTGCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 72 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTCAGAGTAAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARA*NRSTSVRVRIF
Trigger: AAAGATCCTTACTCTGACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVINSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSNPDPT*HVIVLV
Trigger: CACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTT...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTCTGGAAAGCAAACCCTaGCCCTACCTGACACGTGAT +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLLESKP*PYLTRD
Trigger: ATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAG...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCATGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTACHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTGCACTGCAGCCTGTaGTACTCAGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLHCSL*YSALSH
Trigger: GTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR TCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATCTATGACCAGTTTTTaGCTCCATGCGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSMTSF*LHAAQL
Trigger: GAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCTATGACCAGTTTTTaGCTCCATGCGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSMTSF*LHAAQL
Trigger: GAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCTATGACCAGTTTTTaGCTCCATGCGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISMTSF*LHAAQL
Trigger: GAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATGCGAGCAGAGGACTaGCTTGCCTGGATGCAACTA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSMRAED*LAWMQL
Trigger: TAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGCAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGTGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTCTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGAGTATCCGTAGTCTaGCACTCGGCACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGVSVV*HSALLC
Trigger: GCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGTGCTGGCCTGGGATTTaGGAAGTTTTAGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWCWPGI*EVLVNP
Trigger: AGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCA...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCAGTGATAAGCCTGTaGGAATTCTCTCACAATGAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPVISL*EFSHND
Trigger: GTCATTGTGAGAGAATTCTCACAGGCTTATCACTGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCCAGCAACTGGGCAGTaGGAGATCGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMPATGQ*EIAETF
Trigger: GAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVEGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFSFGV*THRLAG
Trigger: TCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTGACTTTAAATCCATaGCATCGAGACCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLTLNP*HRDHLL
Trigger: AAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTCCCCACTCAGCTCTaGTTTGTAATTTATGCACTT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLPTQL*FVIYAL
Trigger: AAGTGCATAAATTACAAATCAGAGCTGAGTGGGGAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAACTGGGGCCATGTGTTaGGAACTGGGAGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRTGAMC*ELGVTG
Trigger: GCCAGTGACTCCCAGTTCTCAACACATGGCCCCAGT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMCSSK*PGAPLV
Trigger: CACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKNLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGCAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTCGCTGCTCGAATTTaGAATGTTGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFAARI*NVESKR
Trigger: CCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKDISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCTCCTTGGTTTTCTTaGACTACTTCTAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPPWFS*TTSRSP
Trigger: TGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGTCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGAGCTCCTCCACGCTaGTGTGGCCGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNRAPPR*CGRRSW
Trigger: CCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGCTCTTTCCAATGCTaGCTCTCGACACACAATAAT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGSFQC*LSTHNN
Trigger: ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCAAGAAACCCAGAGATaGTTCCAACAGCGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAQETQR*FQQREV
Trigger: TACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTCTTCTTTGTCTGTTaGCCAAAGAACCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVFFFVC*PKNLFF
Trigger: AAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRRLGTM*QRLLRT
Trigger: CGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTCTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVRSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSICKWV*AVGFAA
Trigger: AGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLICKWV*AVGFAA
Trigger: AGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: CQILYRQPSRHGRVSELKSTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTCACCTTGCCATGCCTaGCAAATGCTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSPCHA*QMLPAG
Trigger: TCCTGCAGGAAGCATTTGCCAGGCATGGCAAGGTGA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTACHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCTGAACTGGATCAGCTaGGGGTTACCTACAGGACTC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLNWIS*GLPTGL
Trigger: GAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGTGGCCGTAGGTCTTaGGCTGCAGAGTTTCTCCGA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCGRRS*AAEFLR
Trigger: TCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACCGACGTGGCTCAATaGAAGCAAAACCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTDVAQ*KQNRFL
Trigger: CAGGAAGCGGTTTTGCTTCCATTGAGCCACGTCGGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGAACTGGGAGTCACTaGCTTCATTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVRTGSH*LHLKDL
Trigger: CAAATCTTTTAAATGAAGCCAGTGACTCCCAGTTCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCATGTGTTGAGAACTaGGAGTCACTGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPCVEN*ESLASF
Trigger: AAATGAAGCCAGTGACTCCCAGTTCTCAACACATGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKICKWV*AVGFAR
Trigger: TCTAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540441.6
ENST00000631398.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTACAGCCATGCAAAGTaGTTCAACATCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVYSHAK*FNILSS
Trigger: AGATGAAAGGATGTTGAATCACTTTGCATGGCTGTA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTACAGCCATGCAAAGTaGTTCAACATCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKYSHAK*FNILSS
Trigger: AGATGAAAGGATGTTGAATCACTTTGCATGGCTGTA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCTGGAAAGCAAACCCTaGCCCTACCTGACACGTGAT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLESKP*PYLTRD
Trigger: ATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTTGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRELVHK*GVSSDC
Trigger: ACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCATGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPCHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: CQILYRQPSRHGRVSELKFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANFSIRF*ARSALS
Trigger: AGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR TCA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTACSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHCSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACGACACTGCAGCACTTaGGTTACCGTGAGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRRHCST*VTVSGY
Trigger: GTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAGCCCCGGTGGCAAGTaGGACCAGGATCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRSPGGK*DQDLFA
Trigger: AGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGCCAGTGATAAGCCTGTaGGAATTCTCTCACAATGAC +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLPVISL*EFSHND
Trigger: GTCATTGTGAGAGAATTCTCACAGGCTTATCACTGG...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCGGAAATGGGGTTGGTaGCGCAGCAAATCAACGACA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRKWGW*RSKSTT
Trigger: TGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTCGTAATGTCTCTTaGGCTCCTCAACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFRNVS*APQQKD
Trigger: ATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASREGWFS*LAGERL
Trigger: CAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTAGCTCCTGCTCTGTGTaGCTGGGCCCACTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFSSCSV*LGPLPS
Trigger: TGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGGCGCTCCTCAAACTaGATGAGATCAGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVGRSSN*MRSADW
Trigger: CCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGCTACATGTAGGATaGCACCACCGACGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMLHVG*HHRRGS
Trigger: TGAGCCACGTCGGTGGTGTCATCCTACATGTAGCAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVFSFGV*THRLAG
Trigger: TCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTCTCCTTTGGTGTGTaGACACACAGGCTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFSFGV*THRLAG
Trigger: TCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCTTCACATTCCAACCTaGAAATACACTCCGAACCCC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKILHIPT*KYTPNP
Trigger: GGGGTTCGGAGTGTATTTTCAGGTTGGAATGTGAAG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTTCACATTCCAACCTaGAAATACACTCCGAACCCC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLHIPT*KYTPNP
Trigger: GGGGTTCGGAGTGTATTTTCAGGTTGGAATGTGAAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGACTTTAAATCCATaGCATCGAGACCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALTLNP*HRDHLL
Trigger: AAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACGATTAAAAGATGCTaGGCTGACATACACACACAT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTIKRC*ADIHTH
Trigger: ATGTGTGTGTATGTCAGCTCAGCATCTTTTAATCGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCATGGTGTTCTGTCTTaGCTGGGGCCATGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIHGVLS*LGPCVE
Trigger: CTCAACACATGGCCCCAGTCAAGACAGAACACCATG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATTGTCCTGGTGCTTTaGGAGTCTAACAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVIVLVL*ESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAATAGCCAGCGGAGGTaGAGCCCTGCAGACTCGGAA +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNNSQRR*SPADSE
Trigger: TTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: CQILYRQPSRHGRVSELKDISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVILFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCACTCTTCACCTTGCCATaGCTGGCAAATGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWALFTLP*LANASC
Trigger: GCAGGAAGCATTTGCCAGGCATGGCAAGGTGAAGAG...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAGTAAAGAGAGTGATTTaGTGGCAGCCCCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAVKRVI*WQPRWQ
Trigger: TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTAC...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCTCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTATNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGCACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKITTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTACRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISRSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGCGTGGCTTTGGCACTaGAAGATTGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKAWLWH*KIVHLH
Trigger: ATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVILSYRE*VRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVICKWV*AVGFAA
Trigger: AGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCACCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTCCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTGGGCTGCAATTCGTaGAGGAGCCGTCGTGTGACT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRLGCNS*RSRRVT
Trigger: AGTCACACGACGGCTCCTCCACGAATTGCAGCCCAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: DRRSLTNWAARALNRSTSITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTAAAGCGCTTCACCTaGGCCCTGTGGGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNVKRFT*ALWVRV
Trigger: GACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTAC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKINLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: THRLAGQALLQRHATHWVSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGCAACTCCAGTGAATaGTACTCAGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSNSSE*YSDTLT
Trigger: CGTGAGTGTGTCTGAGTACCATTCACTGGAGTTGCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGCAACTCCAGTGAATaGTACTCAGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSNSSE*YSDTLT
Trigger: CGTGAGTGTGTCTGAGTACCATTCACTGGAGTTGCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNTLPDT*LSWCFA
Trigger: CGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGCTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRLEPRL*NQNRGN
Trigger: ATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAG...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKICHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR TCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCATCTATGACCAGTTTTTaGCTCCATGCGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWASMTSF*LHAAQL
Trigger: GAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGA...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCTATGACCAGTTTTTaGCTCCATGCGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSMTSF*LHAAQL
Trigger: GAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACTAGAAGACCAAGACTaGGATGCGAGCAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRLEDQD*DASRGL
Trigger: CAGTCCTCTGCTCGCATCTCAGTCTTGGTCTTCTAG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSNLQC*KQAGML
Trigger: GAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAATCTGTATGGGGGCTaGGCTCAACACTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNLYGG*AQHSSP
Trigger: AGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGCAGGCAGGGGCATCCTaGAGAACAGACATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELQAGAS*RTDIVS
Trigger: AGAAACAATGTCTGTTCTTCAGGATGCCCCTGCCTG...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGCGGGGGCTTGTTGTaGATCCATTTAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGGGLL*IHLTTL
Trigger: CAAAGTGGTTAAATGGATTCACAACAAGCCCCCGCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMQSLLY*TGSAGG
Trigger: ACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGAATTCTCTCACAATaGCCTGTTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRILSQ*PVCWPG
Trigger: CCCAGGCCAGCAAACAGGTCATTGTGAGAGAATTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCAGTGATAAGCCTGTaGGAATTCTCTCACAATGAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPVISL*EFSHND
Trigger: GTCATTGTGAGAGAATTCTCACAGGCTTATCACTGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACCAGTGATAAGCCTGTaGGAATTCTCTCACAATGAC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKPVISL*EFSHND
Trigger: GTCATTGTGAGAGAATTCTCACAGGCTTATCACTGG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCTTTCGTAATGTCTCTTaGGCTCCTCAACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: DELESEVRVLLFPGIGISFRNVS*APQQKD
Trigger: ATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAA...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTATNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGGCAGGGGAGAGACTaGGTGAACTCAAACGACTTT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVWQGRD*VNSNDF
Trigger: AAAGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGAACACAGGTAAGATaGAGTCAATGGCTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRTQVR*SQWLRG
Trigger: CCCCCGAAGCCATTGACTTCATCTTACCTGTGTTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAAGCAGCAACTCCAGTaGATGGTACTCAGACACACT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLKQQLQ*MVLRHT
Trigger: AGTGTGTCTGAGTACCATTCACTGGAGTTGCTGCTT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCCATCATACAGCCATaGAAAGTGATTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASIIQP*KVIQHP
Trigger: AGGATGTTGAATCACTTTGCATGGCTGTATGATGGA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGGTGCAAAGAGTTGGTaGACAAGTGAGGCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIGAKSW*TSEALA
Trigger: AGCTAACGCCTCACTTGTGCACCAACTCTTTGCACC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIRDSKR*RLSIWR
Trigger: CCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNLRRL*RSLSSA
Trigger: CGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKILLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCAGTTTTTGACTCCATaGGGCACAGCTCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSQFLTP*GTAPVN
Trigger: GTTTACAGGAGCTGTGCCGCATGGAGTCAAAAACTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGTTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMDISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGACATCAGCACCATTTaGAAATGGGTCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVDISTI*KWVWAV
Trigger: GACTGCCCAGACCCATTTGCAAATGGTGCTGATGTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: CQILYRQPSRHGRVSELKQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCTCCTTGGTTTTCTTaGACTACTTCTAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPPWFS*TTSRSP
Trigger: TGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGACCACCTGTGGAATTaGTCCCAAGAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNDHLWN*SQELLH
Trigger: GTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTCAGGCTCTTTCCAATaGTGCCTCTCGACACACAAT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSGSFQ*CLSTHN
Trigger: ATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCAGGCTCTTTCCAATaGTGCCTCTCGACACACAAT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSGSFQ*CLSTHN
Trigger: ATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCAAGAAACCCAGAGATaGTTCCAACAGCGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIQETQR*FQQREV
Trigger: TACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGGAGGATTCGGAGAGTaGCATAATACTTACAGGGTT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIGGFGE*HNTYRV
Trigger: AACCCTGTAAGTATTATGGCACTCTCCGAATCCTCC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGATTATGAACACAATGTaGTTCCGAAGTCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVIMNTM*FRSLLS
Trigger: AGAGAGAAGACTTCGGAAGCACATTGTGTTCATAAT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATTATGAACACAATGTaGTTCCGAAGTCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKIMNTM*FRSLLS
Trigger: AGAGAGAAGACTTCGGAAGCACATTGTGTTCATAAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKEFPKP*LSIIIL
Trigger: CAAGATAATGATGCTAAGCCATGGCTTTGGAAATTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTAGCTGAGGCATTCTaGAGTGAAGATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLAEAF*SEDADW
Trigger: CCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCAGTAGCATTGATGTaGGCAACGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMAVALM*ATVTWQ
Trigger: TTGCCAGGTAACCGTTGCCCACATCAATGCTACTGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAAGAACCACTGTGGCTaGAGCAGTGTGTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSKNHCG*SSVCIC
Trigger: GCAAATACACACACTGCTCCAGCCACAGTGGTTCTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTCCAGGCGTGGCTTTaGCACTGGAAGATTGTTCAC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFQAWL*HWKIVH
Trigger: GTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACCCTTTTCCAGGCGTaGCTTTGGCACTGGAAGATT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTLFQA*LWHWKI
Trigger: AATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGATTTGCAAATGGGTCTaGGCAGTCGGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRICKWV*AVGFAA
Trigger: AGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAAT...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAGCACCATTTGCAAATaGGTCTGGGCAGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRSTICK*VWAVGF
Trigger: GAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAAGAGAGTGATTTGCTaGCAGCCCCGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNKRVIC*QPRWQV
Trigger: CACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKICHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWARCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGATGACACCACCGACGTaGCTCAATGGAAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMMTPPT*LNGSKT
Trigger: GGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCAT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCCTACCCTTCTCCTTTaGTGTGTGAACACACAGGCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMPTLLL*CVNTQA
Trigger: AGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCACTTACAAGTCACATaGAAGCCAGGAACCTTCACA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIHLQVT*KPGTFT
Trigger: TGTGAAGGTTCCTGGCTTCCATGTGACTTGTAAGTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCAGAGTCCATTTTCTaGCTTTCTAGAAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSESIF*LSRSYQ
Trigger: TTGGTAACTTCTAGAAAGCCAGAAAATGGACTCTGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCATGTGTTGAGAACTaGGAGTCACTGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPCVEN*ESLASF
Trigger: AAATGAAGCCAGTGACTCCCAGTTCTCAACACATGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCATGTGTTGAGAACTaGGAGTCACTGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPCVEN*ESLASF
Trigger: AAATGAAGCCAGTGACTCCCAGTTCTCAACACATGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTATTGACAACTGTTTaGTCCCAACACACAAAACAG +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLLTTV*SQHTKQ
Trigger: CTGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 72 bp ATGGTACTCAGACACACTCACGGGACAGCACAGAACTaGATTCTTCTTTGTCTGTTGCCCAAAGAACCTGTT +
Preference number: 4 (lower is better)
Translates to: MVLRHTHGTAQN*ILLCLLPKEPV
Trigger: AACAGGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCTGAGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNSLEPA*RGDGTS
Trigger: GGATGTACCATCACCCCTTCATGCTGGCTCTAAGCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGSLGQ*AQQLTL
Trigger: CAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLCHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRISSLA*CSSASE
Trigger: CTCAGAAGCACTGCTGCATCATGCTAACGAGCTGAT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVSNLQC*KQAGML
Trigger: GAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSNLQC*KQAGML
Trigger: GAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSNLQC*KQAGML
Trigger: GAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGCTGGCCTGGGATTTaGGAAGTTTTAGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCWPGI*EVLVNP
Trigger: AGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATGCTGGCCTGGGATTTaGGAAGTTTTAGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKCWPGI*EVLVNP
Trigger: AGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCTCCCCACTCAGCTCTaGTTTGTAATTTATGCACTT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKILPTQL*FVIYAL
Trigger: AAGTGCATAAATTACAAATCAGAGCTGAGTGGGGAG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAAGCAGCAACTCCAGTaGATGGTACTCAGACACACT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVKQQLQ*MVLRHT
Trigger: AGTGTGTCTGAGTACCATTCACTGGAGTTGCTGCTT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMISGIL*SSIDVG
Trigger: GCCCACATCAATGCTACTGCAAAGAATGCCGCTGAT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCAGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGCAGAGGACTGACTTaGCTGGATGCAACTAACTTG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSRGLT*LDATNL
Trigger: CAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTCGCTGCTCGAATTTaGAATGTTGAAAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFAARI*NVESKR
Trigger: CCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCCTCCTTGGTTTTCTTaGACTACTTCTAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSPPWFS*TTSRSP
Trigger: TGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKILFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGCTCTTTCCAATGCTaGCTCTCGACACACAATAAT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGSFQC*LSTHNN
Trigger: ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGGCTCTTTCCAATGCTaGCTCTCGACACACAATAAT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLGSFQC*LSTHNN
Trigger: ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGAGGATTCGGAGAGTaGCATAATACTTACAGGGTT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGGFGE*HNTYRV
Trigger: AACCCTGTAAGTATTATGGCACTCTCCGAATCCTCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHEFPKP*LSIIIL
Trigger: CAAGATAATGATGCTAAGCCATGGCTTTGGAAATTC...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVTTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTTKTH*RSGGFI
Trigger: AATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVISEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGTGAAGATGCAGACTaGAAAGCAAACCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSEDAD*KANPDP
Trigger: AGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSLDTC*ESHLQC
Trigger: GCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCTCTTCCAAATGCCCTaGAGCCCCGCTTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLFQMP*SPACEI
Trigger: GATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVWRWYI*PDFSRI
Trigger: GATGCGGCTAAAGTCTGGCCAAATATACCACCTCCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCGTGGCTTTGGCACTaGAAGATTGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVAWLWH*KIVHLH
Trigger: ATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCGCGTGGCTTTGGCACTaGAAGATTGTTCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSAWLWH*KIVHLH
Trigger: ATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGC...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RRSLTNWAARALNRSTSVNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGGGTCAGCAGACGTTTaGAGCCCATTCCAAGAATCT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRGSADV*SPFQES
Trigger: AGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGTTGGGACAAGCAGATaGTTGTGTCTGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMVGTSR*LCLESL
Trigger: CAGAGATTCCAGACACAACCATCTGCTTGTCCCAAC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAACAATACCAGCAACTaGGCAGTGAGAGATCGCAGA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVINNTSN*AVRDRR
Trigger: TCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVSSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTCCTCAACAGAAAGATaGGTGGTTCCTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVISSTER*VVPSQD
Trigger: GTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCAACCTCAACCAAGTATaGCAGGCTCTTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSNLNQV*QALQQF
Trigger: GAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTT...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATATCCAGACCACCTGTaGAATTGCTCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRYPDHL*NCSQEL
Trigger: GAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGACATGCCACGCACTaGGTTAATACTGTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRHATH*VNTVGN
Trigger: GTTTCCGACAGTATTAACCCAGTGCGTGGCATGTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGTGTTCTGTCTTGACTaGGGCCATGTGTTGAGAACT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIVFCLD*GHVLRT
Trigger: AGTTCTCAACACATGGCCCCAGTCAAGACAGAACAC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 72 bp AGGGATAAATTTATTAAAGGGCATCCGGAAATGGGGTaGGTGACGCAGCAAATCAACGACATCCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RDKFIKGHPEMG*VTQQINDILGE
Trigger: TTCTCCAAGGATGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTTATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATACAGCCATGCAAAGTaGTTCAACATCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKYSHAK*FNILSS
Trigger: AGATGAAAGGATGTTGAATCACTTTGCATGGCTGTA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFNSAPG*IKLLVP
Trigger: AGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGCACATTACCATGACATaGCTGGAAGTGGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELHITMT*LEVEFS
Trigger: GGAAAACTCCACTTCCAGTCATGTCATGGTAATGTG...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTGTGCACATTACCATaGCATGACTGGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLCTLP*HDWKWS
Trigger: ACTCCACTTCCAGTCATGTCATGGTAATGTGCACAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATGCAGACTCGGAAACTaGTGCAGCTTGTGCACATTA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRCRLGN*CSLCTL
Trigger: TAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMCHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCACTATCTTGGTTTATaGAGCGGAGAATTGCACTGC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMHYLGL*SGELHC
Trigger: GCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: CQILYRQPSRHGRVSELKCSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVICSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTGTAGTCTATGTTGCTaGCTTGGACATCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMCSLCC*LGHQHH
Trigger: ATGGTGCTGATGTCCAAGTCAGCAACATAGACTACA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLQTGS*YSNSSN
Trigger: ATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGCTGGCCTGGGATTTaGGAAGTTTTAGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCWPGI*EVLVNP
Trigger: AGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAAGCCGAAATGGAACTaGCATCATAGTCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVKPKWN*HHSLGD
Trigger: GTCTCCAAGACTATGATGTCAGTTCCATTTCGGCTT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGCAGAGACTTTCGGTTaGTCAGCTGAATCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNAETFG*SAESVC
Trigger: GCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGGGGAGAGACTGAGTaGACTCAAACGACTTTTCAT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRGETE*TQTTFH
Trigger: ATGAAAAGTCGTTTGAGTTCACTCAGTCTCTCCCCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGCTCCTCAAACTGAATaGGATCAGCAGATTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRAPQTE*DQQIGG
Trigger: TCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTGTGGAGTACATTATaGACACAATGTGCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLWSTL*TQCASE
Trigger: TTCGGAAGCACATTGTGTTCATAATGTACTCCACAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTGTGGAGTACATTATaGACACAATGTGCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLWSTL*TQCASE
Trigger: TTCGGAAGCACATTGTGTTCATAATGTACTCCACAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCCATCATACAGCCATaGAAAGTGATTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISIIQP*KVIQHP
Trigger: AGGATGTTGAATCACTTTGCATGGCTGTATGATGGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATCCATCATACAGCCATaGAAAGTGATTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSIIQP*KVIQHP
Trigger: AGGATGTTGAATCACTTTGCATGGCTGTATGATGGA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRIHVFY*RSSQFR
Trigger: ACGGAACTGAGAACTCCTGCAGTAGAACACGTGGAT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLCGSV*SGREKQ
Trigger: TTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAACAGGGCAGGTGTTTaGAGGAAGACAGGTTACTCT +
Preference number: 4 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRNRAGV*RKTGYS
Trigger: AGAGTAACCTGTCTTCCTGCAAACACCTGCCCTGTT...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGTCCGACTGTGAAATGTaGTCTTCCAAATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRSDCEM*SSKCPG
Trigger: TCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGA...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGTACCACATTAAGGTaGAAAGAGTTGGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGTTLR*KELVHK
Trigger: CTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTTCTCACGGATTCTTTaGACAACAGCAGTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIFSRIL*TTAVAD
Trigger: GTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRVYLQI*GDSAAV
Trigger: AACTGCGGCAGAGTCTCCGCAGATTTGCAAATACAC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCATATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLLSAL*TILVYE
Trigger: TTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTTTGTAAACGGGTTCTaGCACCCCCGAGTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNFVNGF*HPRVFR
Trigger: CCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACAACACTCTTCACCTTaGCATGCCTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRQHSSP*HAWQML
Trigger: AAGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATCCTTATTGGAACAATaGTGTCTGCAGACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRSLLEQ*CLQTGS
Trigger: CGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCCTCCTTGGTTTTCTTaGACTACTTCTAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVPPWFS*TTSRSP
Trigger: TGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCCTCCTTGGTTTTCTTaGACTACTTCTAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIPPWFS*TTSRSP
Trigger: TGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGAGTTTAACAAACTGGGCACACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: VIIRQLSFWDRRSLTNWAHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...TGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCAAGAAACCCAGAGATaGTTCCAACAGCGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMQETQR*FQQREV
Trigger: TACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCCAACAGGTTCTTTCTaGTCTATGAATGAATCCGCC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIPTGSF*SMNESA
Trigger: GGCGGATTCATTCATAGAGCAGAAAGAACCTGTTGG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGAGGATTCGGAGAGTaGCATAATACTTACAGGGTT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGGFGE*HNTYRV
Trigger: AACCCTGTAAGTATTATGGCACTCTCCGAATCCTCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGGAAGTGGGACTGCTaGAAAAAGCTTAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNRKWDC*KKLRAS
Trigger: GCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLCRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNQLCLD*SPITTW
Trigger: CCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLRSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVICHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGCCATTCTGAGCAGTaGCAATGTTTACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCHSEQ*QCLHLE
Trigger: TTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRTSLLN*ISWGLP
Trigger: AGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCAACAGAAAGATGGGTaGTTCCTTCCCAAGACATCA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVQQKDG*FLPKTS
Trigger: TGATGTCTTGGGAAGGAACCACCCATCTTTCTGTTG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAATGAGATCAGCAGATTaGAGGATAACGGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRMRSAD*RITGSG
Trigger: ACCAGACCCCGTTATCCTCCAATCTGCTGATCTCAT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGATGCAGGACGAGCTaGAGTCAGAGGTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNRCRTS*SQRSEF
Trigger: AAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCACTTACAAGTCACATaGAAGCCAGGAACCTTCACA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMHLQVT*KPGTFT
Trigger: TGTGAAGGTTCCTGGCTTCCATGTGACTTGTAAGTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACTTACAAGTCACATaGAAGCCAGGAACCTTCACA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHLQVT*KPGTFT
Trigger: TGTGAAGGTTCCTGGCTTCCATGTGACTTGTAAGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGTGTTCTGTCTTGACTaGGGCCATGTGTTGAGAACT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRVFCLD*GHVLRT
Trigger: AGTTCTCAACACATGGCCCCAGTCAAGACAGAACAC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 72 bp GACGCAGCAAATCAACGACATCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCTGAGTGCGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DAANQRHPWRTV*SFLFHPECVLF
Trigger: AAAGAGAACGCACTCAGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTTGCTGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTACAGCCATGCAAAGTaGTTCAACATCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSYSHAK*FNILSS
Trigger: AGATGAAAGGATGTTGAATCACTTTGCATGGCTGTA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVASLSC*SHPRVL
Trigger: TAGAACACGTGGATGGCTTCAACAAGATAATGATGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRCHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVICSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTGCTCACTGTTTCTATaGCCAGTTTTTGACTCCATG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMCSLFL*PVFDSM
Trigger: CATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACTTTGATGCCATTCTaGGCAGTGGCAATGTTTACA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTLMPF*AVAMFT
Trigger: TGTAAACATTGCCACTGCTCAGAATGGCATCAAAGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVISFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGTTTTAGTAAATCCTaGGTAAAGCGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSFSKS*VKRFTW
Trigger: CCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGACATCCCAGTCCTTTaGGAAACACCAGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNDIPVL*ETPVIS
Trigger: GCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACATGGCAGAGTTTCTaGGTTAAAGCCGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTWQSF*VKAEME
Trigger: TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTCGTAATGTCTCTTaGGCTCCTCAACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFRNVS*APQQKD
Trigger: ATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTTCGGTCAAGGTCATaGATCCATATTCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNVRSRS*IHIHRG
Trigger: ACCCCTGTGAATATGGATTCATGACCTTGACCGAAC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCTGACTTTAAATCCATaGCATCGAGACCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLTLNP*HRDHLL
Trigger: AAGGAGATGGTCTCGATGTCATGGATTTAAAGTCAG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACTCGGCACTGCTTTaGAAAATGATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRHSALL*KMMVIG
Trigger: TCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACCAACAGGTTCTTTCTaGTCTATGAATGAATCCGCC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRPTGSF*SMNESA
Trigger: GGCGGATTCATTCATAGAGCAGAAAGAACCTGTTGG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCATTATGAACACAATGTaGTTCCGAAGTCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIIMNTM*FRSLLS
Trigger: AGAGAGAAGACTTCGGAAGCACATTGTGTTCATAAT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKEFPKP*LSIIIL
Trigger: CAAGATAATGATGCTAAGCCATGGCTTTGGAAATTC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIEFPKP*LSIIIL
Trigger: CAAGATAATGATGCTAAGCCATGGCTTTGGAAATTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACGAATATCAGGAAGTaGGACTGCTGGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTNIRK*DCWKKL
Trigger: AAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACAGCAGCTTACTTTaGGGACAGAAGAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRHSSLL*GQKKAV
Trigger: TACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVICRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVCRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMCRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCTGCAGGTTGAGTATTTaGAGGTGGTATATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSCRLSI*RWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCA...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNSPITT*SPSLFL
Trigger: AAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTGGACCAAAATAATGTaGAAACCATGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIWTKIM*KPCLCL
Trigger: GAGACACAGGCATGGTTTCCACATTATTTTGGTCCA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCGCTCTGCACTATCTTaGTTTATGAAGCGGAGAATT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRSALS*FMKRRI
Trigger: AATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACCAATTTTGTATCTGTaGAGGCTATTCACTGCACCG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRPILYL*RLFTAP
Trigger: CGGTGCAGTGAATAGCCTCCACAGATACAAAATTGG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGACACAAGATGGCTaGCTTTTCAGCAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMTQDG*LFSKSI
Trigger: GATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGGAGTTTAACAAACTaGGCAGCTAGAGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRSLTN*AARALN
Trigger: GTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: CQILYRQPSRHGRVSELKRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGAACTGGGAGTCACTaGCTTCATTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRTGSH*LHLKDL
Trigger: CAAATCTTTTAAATGAAGCCAGTGACTCCCAGTTCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGAACTGGGAGTCACTaGCTTCATTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRTGSH*LHLKDL
Trigger: CAAATCTTTTAAATGAAGCCAGTGACTCCCAGTTCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACCATGTGTTGAGAACTaGGAGTCACTGGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRPCVEN*ESLASF
Trigger: AAATGAAGCCAGTGACTCCCAGTTCTCAACACATGG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTATTGACAACTGTTTaGTCCCAACACACAAAACAG +
Preference number: 4 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLLTTV*SQHTKQ
Trigger: CTGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 72 bp GATTCTTCTTTGTCTGTTGCCCAAAGAACCTGTTCTTaGAGTCTGTTCCAGGTGACTTGTAATGATACCTCT +
Preference number: 4 (lower is better)
Translates to: DSSLSVAQRTCS*SLFQVTCNDTS
Trigger: AGAGGTATCATTACAAGTCACCTGGAACAGACTCAAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTGTCACATACACAGATaGATTCTGCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNCHIHR*ILLLCG
Trigger: GCCACAGAGAAGCAGAATTCATCTGTGTATGTGACA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTTGCACAACAGCCTTaGGTTGATAATCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRFAQQP*VDNLYG
Trigger: CCCATACAGATTATCAACTCAAGGCTGTTGTGCAAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAGAATCTGCAATACATaGGGCACTGCTTCTAATAAC +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIRICNT*GTASNN
Trigger: GTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATGTGTCTGGAATCTCTaGTACGATGTCAATCAACTC +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRCVWNL*YDVNQL
Trigger: GAGTTGATTGACATCGTATCAGAGATTCCAGACACA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCTTTCTATTTCATCCTaGGTGCGTTCTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLSISS*VRSLLG
Trigger: CCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNFRLIS*ICLPDS
Trigger: AGAATCTGGCAGACAGATTCAGCTGATCAACCGAAA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTTCGTAATGTCTCTTaGGCTCCTCAACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVFRNVS*APQQKD
Trigger: ATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGTTTCGTAATGTCTCTTaGGCTCCTCAACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELFRNVS*APQQKD
Trigger: ATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAA...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCCGCTTCCTGCTAGTTaGGTTTTTAGTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNPLPAS*VFSAFF
Trigger: GAAGAAAGCACTAAAAACTCAACTAGCAGGAAGCGG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACTCCCCACTCAGCTCTaGTTTGTAATTTATGCACTT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRLPTQL*FVIYAL
Trigger: AAGTGCATAAATTACAAATCAGAGCTGAGTGGGGAG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACGATTAAAAGATGCTaGGCTGACATACACACACAT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTIKRC*ADIHTH
Trigger: ATGTGTGTGTATGTCAGCTCAGCATCTTTTAATCGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTGTGGAGTACATTATaGACACAATGTGCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLWSTL*TQCASE
Trigger: TTCGGAAGCACATTGTGTTCATAATGTACTCCACAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCCATCATACAGCCATaGAAAGTGATTCAACATCCT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSIIQP*KVIQHP
Trigger: AGGATGTTGAATCACTTTGCATGGCTGTATGATGGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNSSVCI*KSAETL
Trigger: CAGAGTCTCCGCAGATTTGCAAATACACACACTGCT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNYEAEN*TAACDT
Trigger: AGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTCATAGTACGCAAGTTTaGACTGCCGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFHSTQV*TAGQSG
Trigger: ACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATG...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATCAGCTGAATCTGTCTaGCAGATTCTATATCGGCAA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRSAESV*QILYRQ
Trigger: TTGCCGATATAGAATCTGGCAGACAGATTCAGCTGA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGGCTCTTTCCAATGCTaGCTCTCGACACACAATAAT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNGSFQC*LSTHNN
Trigger: ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATTATGAACACAATGTaGTTCCGAAGTCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSIMNTM*FRSLLS
Trigger: AGAGAGAAGACTTCGGAAGCACATTGTGTTCATAAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGTGCTTCTGAGGCCTaGTTTTTATGGACCAAAATA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSASEA*FLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAACCTGTTTGCTGGCCTaGGATTTGAGAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRTCLLA*DLRSFS
Trigger: ACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: ATRNPEMLPTARSNESKISFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTATTGACAACTGTTTaGTCCCAACACACAAAACAG +
Preference number: 4 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLLTTV*SQHTKQ
Trigger: CTGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRCILGC*RERISG
Trigger: TCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTGCTGGCCTGGGATTTaGGAAGTTTTAGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNCWPGI*EVLVNP
Trigger: AGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR TCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAACAAATACAGACTTGTaGGCTTCACACATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRTNTDL*ASHILP
Trigger: TGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGGAAGATTGTTCACTTaGATCTTTGATGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRGRLFT*IFDEAQ
Trigger: TTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAGACCAGGATCTTTTTaGTGCCAATTTTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVRPGSF*CQFCIC
Trigger: ACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR GCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCAGAGGTCAGAGTTTTaGTCTTTCCTGGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNQRSEF*SFLVLE
Trigger: TTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTCTTCTTTGTCTGTTaGCCAAAGAACCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFFFVC*PKNLFF
Trigger: AAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTATGTACTCTTTCGTTTaGGGACTATGTGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFMYSFV*GLCGSV
Trigger: GACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: NQALSNAASRHTIMCVVIEAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAATAACTCAATCAGCTTaGAGTATCCGTAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRITQSA*SIRSLT
Trigger: TGTCAGACTACGGATACTCCAAGCTGATTGAGTTAT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTAGTTTTGCTCTTTCCTaGTATTGGAATCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLSFALS*YWNLHF
Trigger: AAAATGGAGATTCCAATACCAGGAAAGAGCAAAACT...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTCAGAGTCCATTTTCTaGCTTTCTAGAAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVSESIF*LSRSYQ
Trigger: TTGGTAACTTCTAGAAAGCCAGAAAATGGACTCTGA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCAGAGTCCATTTTCTaGCTTTCTAGAAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSESIF*LSRSYQ
Trigger: TTGGTAACTTCTAGAAAGCCAGAAAATGGACTCTGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGAACTGGGAGTCACTaGCTTCATTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRTGSH*LHLKDL
Trigger: CAAATCTTTTAAATGAAGCCAGTGACTCCCAGTTCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTATTGACAACTGTTTaGTCCCAACACACAAAACAG +
Preference number: 4 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLLTTV*SQHTKQ
Trigger: CTGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
3UTR CAA 72 bp TCACCATTTCATTATCTTGTTGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATACGATGTCAATCAACT +
Preference number: 4 (lower is better)
Translates to: SPFHYLVGTSRW*CLESLIRCQST
Trigger: AGTTGATTGACATCGTATCAGAGATTCCAGACACAACCATCTGCTTGTCCCAACAAGATAATGAAATGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CAA 72 bp TTCTCTTTTGGGGATACAAATCACCATTTCATTATCTaGTTGGGACAAGCAGATGGTTGTGTCTGGAATCTC +
Preference number: 4 (lower is better)
Translates to: FSFGDTNHHFII*LGQADGCVWNL
Trigger: GAGATTCCAGACACAACCATCTGCTTGTCCCAACAAGATAATGAAATGGTGATTTGTATCCCCAAAAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGATCAGCAATTGCATTTaGACTCTTTGTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRISNCI*TLCFTE
Trigger: CTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGAT...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR TCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATACGATTAAAAGATGCTaGGCTGACATACACACACAT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNTIKRC*ADIHTH
Trigger: ATGTGTGTGTATGTCAGCTCAGCATCTTTTAATCGT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTCTTCTTTGTCTGTTaGCCAAAGAACCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRFFFVC*PKNLFF
Trigger: AAAGAACAGGTTCTTTGGGCAACAGACAAAGAAGAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGAGGCCTGGTTTTTATaGACCAAAATAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASREAWFL*TKIMWK
Trigger: TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGAGTGCGTTCTCTTTTaGGGATACAAATCACCATTT +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNECVLF*GYKSPF
Trigger: AAATGGTGATTTGTATCCCCAAAAGAGAACGCACTC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTATTTTGAAGCAGCTTTaGCTAGACTGGTCGCCAATA +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFILKQL*LDWSPI
Trigger: TATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAAT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR GCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTCTATTTCATCCTGAGTaGGTTCTCTTTTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFLFHPE*VLFWGY
Trigger: GTATCCCCAAAAGAGAACGCACTCAGGATGAAATAG...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CCA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTG +
Preference number: 4 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNEFPKP*LSIIIL
Trigger: CAAGATAATGATGCTAAGCCATGGCTTTGGAAATTC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAATCTTGTAAGAGTCTaGATCAAATTCATGTTCGCT +
Preference number: 4 (lower is better)
Translates to: MHLMHILENQALSNAASRNLVRV*IKFMFA
Trigger: AGCGAACATGAATTTGATCCAGACTCTTACAAGATT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTAGGCAGTTATCTTTTTaGGACCGAAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFRQLSF*DRRSLT
Trigger: TGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTTACACAGATGAATTCTaGTTCTCTGTGGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFYTDEF*FSVAFK
Trigger: TTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTA...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR GCA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTAGACCGCACATTCTTTaGAAACAAATACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RNGTDIIVLETKCITKSFRPHIL*KQIQTC
Trigger: ACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
3UTR CAA 72 bp TTTAAAATTACAATAACAAGGTTAAGTGGATCAACCTaGGCCTTCCTATGTGTAGGTAGAATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: FKITITRLSGST*AFLCVGRIPVS
Trigger: AGAGACAGGAATTCTACCTACACATAGGAAGGCCAAGGTTGATCCACTTAACCTTGTTATTGTAATTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CTTGAAGGTTTTGCAACAGGCTCCCCAGGCTTGGGAAGTGGGCCCTaGCACGGCCCTCCTCAGCGCGCCCACTGCCCTGACCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: LEGFATGSPGLGSGP*HGPPQRAHCPDRPD
Trigger: GTCAGGGCGGTCAGGGCAGTGGGCGCGCTGAGGAGGGCCGTGTCAGGGCCCACTTCCCAAGCCTGGGGAGCCTGTTGCAAAACCTTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS CCA 90 bp CCCTCAGGCACATCCTTGAAGGTTTTGCAACAGGCTCCCCAGGCTTaGGAAGTGGGCCCTGACACGGCCCTCCTCAGCGCGCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: PSGTSLKVLQQAPQA*EVGPDTALLSAPTA
Trigger: GGCAGTGGGCGCGCTGAGGAGGGCCGTGTCAGGGCCCACTTCCCAAGCCTGGGGAGCCTGTTGCAAAACCTTCAAGGATGTGCCTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS-3UTR CAA 90 bp CCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACCCCCAGCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: PGQTRRAVTPQDLHAHPQLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...CTGGGGGTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS GCA 90 bp CGTCGTGTGACTGGGAAGACCCCAAGGGGCTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCAGCCGTCCGTTTCCTTGTTCACGGA +
Preference number: 5 (lower is better)
Translates to: RRVTGKTPRGSGGPD*WVGDTPAVRFLVHG
Trigger: TCCGTGAACAAGGAAACGGACGGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCCCTTGGGGTCTTCCCAGTCACACGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACCCCCAGTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: PGQTRRAVTPQDLHAHPQFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...CTGGGGGTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS CCA 90 bp CGTGTGACTGGGAAGACCCCAAGGGGCTCTGGCGGGCCTGACTGCTaGGTAGGAGACACACCAGCCGTCCGTTTCCTTGTTCACGGATTG +
Preference number: 5 (lower is better)
Translates to: RVTGKTPRGSGGPDC*VGDTPAVRFLVHGL
Trigger: CAATCCGTGAACAAGGAAACGGACGGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCCCTTGGGGTCTTCCCAGTCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS GCA 90 bp CAGACCTCTGCAGTGGCCAGGATCCTAGCCCAGTTCCCTTCTCCATaGCTGCTTCTCTCGGCTCTACCATGGACAGCACCACTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: QTSAVARILAQFPSP*LLLSALPWTAPLGC
Trigger: GCACCCCAGTGGTGCTGTCCATGGTAGAGCCGAGAGAAGCAGGCATGGAGAAGGGAACTGGGCTAGGATCCTGGCCACTGCAGAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQEQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: RHEGTGAHRRSTGESSVREQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTCATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGENEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS TCA 90 bp GGGTTCTGCCACCCCCGAGTTTTTCGGCGTCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTACGACCAGCCTCAGGTGACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GFCHPRVFRRRHCST*VTVSGYDQPQVTLL
Trigger: CAGCAAGGTCACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGGGGGTGGCAGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCAAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: TGPWANKEGRDTTGPPRPNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...TGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp AGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: RHEGTGAHRRSTGESSVRSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...CCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTGGGCAAACAAGGATTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: RSGGEAPALCDWALGKQGFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp CTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LGPGQTRRAVTPQDLHAHDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...GTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGEDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGACTGGGGCCATGTGTaGAGAACTGGGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGDWGHV*RTGSHW
Trigger: CCAGTGACTCCCAGTTCTCAACACATGGCCCCAGTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CACGTGATTGTCCTGGTGCTTTGCGAGTCTAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCTCCGCTACCGCCACCACCACCACCA +
Preference number: 5 (lower is better)
Translates to: HVIVLVLCESNSAPG*IKLLVPPLPPPPPP
Trigger: TGGTGGTGGTGGTGGCGGTAGCGGAGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTTAGACTCGCAAAGCACCAGGACAATCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 90 bp TCGGGCACCTCCAGGATGCGCTCGCCCTCCGAGGGCTGGTTTTCATaGTTGGCAGGGGAGAGACTGAGTGAACTCAAACGACCTACAGGA +
Preference number: 5 (lower is better)
Translates to: SGTSRMRSPSEGWFS*LAGERLSELKRPTG
Trigger: TCCTGTAGGTCGTTTGAGTTCACTCAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS-3UTR CAA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGATCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CAGGCACGAGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: QARGDRRTQEVDGGVVGQNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...CTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGCCTACCCTTCTCCTTaGGTGTGTGAACACACAGGC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGAYPSP*VCEHTG
Trigger: GCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS TCA 90 bp ACCCAGCAAAGCCCTAGGTCATGGCGTGGGGTCTTCCTATCCACCTaGGTCCACCCCTTTCATCATCCTGGGCAACTGAACACCCAGGGA +
Preference number: 5 (lower is better)
Translates to: TQQSPRSWRGVFLST*VHPFHHPGQLNTQG
Trigger: TCCCTGGGTGTTCAGTTGCCCAGGATGATGAAAGGGGTGGACTCAGGTGGATAGGAAGACCCCACGCCATGACCTAGGGCTTTGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTGGGCAAACAAGGAAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: RSGGEAPALCDWALGKQGNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGENLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CTGGGCCCTGGGCAAACAAGGAGGGCCGTGACACCACAGGACCTCCACGCCCACAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: LGPGQTRRAVTPQDLHAHKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...GTGGGCGTGGAGGTCCTGTGGTGTCACGGCCCTCCTTGTTTGCCCAGGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS TCA 90 bp CCGACTGTGAAATGTGCTCTTCCAAATGCCCTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAATAGCCAGCGGAGGTGCAGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: PTVKCALPNALEPRL*NQNRGNSQRRCSPA
Trigger: TGCAGGGCTGCACCTCCGCTGGCTATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACATTTCACAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp GCTACTGGTACCTCCGCTACCGCCACCACCACCACCAAAACGCATTaGCGAAGTGGAGGGTTCATTAGGGCAATGAGCACAGCAGCTTAC +
Preference number: 5 (lower is better)
Translates to: ATGTSATATTTTKTH*RSGGFIRAMSTAAY
Trigger: GTAAGCTGCTGTGCTCATTGCCCTAATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTGGTGGTGGCGGTAGCGGAGGTACCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS CCA 90 bp CCGAGTTTTTCGGCGTCGACACTGCAGCACTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGTGACCTTGCTGGTGCTCACTGTTTC +
Preference number: 5 (lower is better)
Translates to: PSFSASTLQHLSYRE*VRPASGDLAGAHCF
Trigger: GAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCCACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: YPDHLWNCSQELLHAAVAHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AGGGGACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAACGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: RGQAHTGGRRGSRRSGGERLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...TTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDASFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTTCGCTGAAATCCTTATaGGAACAATGCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: EVDGGVVGQAEKLLLCVTSLKSL*EQCCLQ
Trigger: CTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA...AGTCACACAGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDALTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDANFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS GCA 90 bp CCATGCCTGCTTCTCTCGGCTCTACCATGGACAGCACCACTGGGGTaGTTTTCAAATGCAAACCTGGGCTCCAGCTCTCTCCAACACAGT +
Preference number: 5 (lower is better)
Translates to: PCLLLSALPWTAPLG*FSNANLGSSSLQHS
Trigger: ACTGTGTTGGAGAGAGCTGGAGCCCAGGTTTGCATTTGAAAAGCACCCCAGTGGTGCTGTCCATGGTAGAGCCGAGAGAAGCAGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CCA 90 bp CTTCTCCATGCCTGCTTCTCTCGGCTCTACCATGGACAGCACCACTaGGGTGCTTTTCAAATGCAAACCTGGGCTCCAGCTCTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: LLHACFSRLYHGQHH*GAFQMQTWAPALSN
Trigger: GTTGGAGAGAGCTGGAGCCCAGGTTTGCATTTGAAAAGCACCCCAGTGGTGCTGTCCATGGTAGAGCCGAGAGAAGCAGGCATGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGCWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGTGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDACWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGEQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GACAGGCGCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCTCTTGCCATCCTTATTaGCTGGTAGGTTATAAACAT +
Preference number: 5 (lower is better)
Translates to: DRRTQEVDGGVVGQAEKLSCHPY*LVGYKH
Trigger: ATGTTTATAACCTACCAGCAAATAAGGATGGCAAGA...GAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCATTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AGCTCCAAGCTTGAGTTCCGAGGCTGTGTGCGATTCGGGCACCTCCAGGATGCGCTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: SSKLEFRGCVRFGHLQDALEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...CGCATCCTGGAGGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCACACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGACAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCACACAGGAGGTCGACGGGGGAGTCGTCGGTCAGGCGGAGAAGCTCCTGCTCTACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: AHRRSTGESSVRRRSSCSTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...AGAGCAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGGTCAGGCGGAGAAGCTCCTGCTCTGTGTGACTGGGCCCTGGGCAAACAAGGATCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: RSGGEAPALCDWALGKQGSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...TCCTTGTTTGCCCAGGGCCCAGTCACACAGAGCAGGAGCTTCTCCGCCTGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551878.1
ENST00000633549.1
CDS-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS TCA 90 bp GTGAAGATGCAGACTGGAAAGCAAACCCTGACCCTACCTGACACGTaGTTGTCCTGGTGCTTTGCGAGTCTAACAGTGCGCCCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: VKMQTGKQTLTLPDT*LSWCFASLTVRPGE
Trigger: TTCACCCGGGCGCACTGTTAGACTCGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS GCA 90 bp TTTTACTCTGGCTCAATCCCTCCATCTAACACTGACCCAGACCTCTaGAGTGGCCAGGATCCTAGCCCAGTTCCCTTCTCCATGCCTGCT +
Preference number: 5 (lower is better)
Translates to: FYSGSIPPSNTDPDL*SGQDPSPVPFSMPA
Trigger: AGCAGGCATGGAGAAGGGAACTGGGCTAGGATCCTGGCCACTGCAGAGGTCTGGGTCAGTGTTAGATGGAGGGATTGAGCCAGAGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGATTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TCCACGGGGTCCTTGCTGAGCAGTGACTCGGAGGTTTCCGAGGAGGGGCAGGGATTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTC +
Preference number: 5 (lower is better)
Translates to: STGSLLSSDSEVSEEGQGFLLPI*YLWRLF
Trigger: GAATAGCCTCCACAGATACAAAATTGGCAGCAAAAA...TCCCTGCCCCTCCTCGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCCAGTGGAAATCGTATaGATCCCGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVPVEIV*IPLLLK
Trigger: CTTCAGCAGCAGCGGGATCAATACGATTTCCACTGG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGACTGGGGCCATGTGTaGAGAACTGGGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVDWGHV*RTGSHW
Trigger: CCAGTGACTCCCAGTTCTCAACACATGGCCCCAGTC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp TTCTGGAGTGAAGATGCAGACTGGAAAGCAAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTGCTTTGCGAGTCTAACAGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: FWSEDADWKANPDPT*HVIVLVLCESNSAP
Trigger: GGGCGCACTGTTAGACTCGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 90 bp GGAGCTGCTGCAGCTCCTTCCGGGATAATCTGTAGTCTATGTTGCTaGCTTGGACATCAGCACCATTTGCAAATGGGTCTGGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: GAAAAPSGIICSLCC*LGHQHHLQMGLGSR
Trigger: CCGACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCCAAGTCAGCAACATAGACTACAGATTATCCCGGAAGGAGCTGCAGCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551678.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632094.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 90 bp CCAGGGACCTGTCCCACACCACAGCCGTATAGCCTTTCAATGCCTTaGCTCTGTCATCTCCGACGACATCCTCCTGTGTTCAATTTCACT +
Preference number: 5 (lower is better)
Translates to: PGTCPTPQPYSLSMP*LCHLRRHPPVFNFT
Trigger: AGTGAAATTGAACACAGGAGGATGTCGTCGGAGATGACAGAGGCAAGGCATTGAAAGGCTATACGGCTGTGGTGTGGGACAGGTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCATCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTGTTGCTGACGCTCTaGCCATCCTTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLLLTL*PSLFAG
Trigger: ACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCCAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: YPDHLWNCSQELLHAAVARRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...GGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CAAGAGCTCCTCCACGCTGCTGTGGCCGTAGGTCTTGGGCTGCAGAGTTTCTCCCCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: QELLHAAVAVGLGLQSFSPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...GGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWRPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDRPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCAAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGCTTCACCTGGGCCCTGTGGGTAAGGGTCAGCAGACGTTTGGAGCCCATTCCAAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: RFTWALWVRVSRRLEPIPKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...TGGAATGGGCTCCAAACGTCTGCTGACCCTTACCCACAGGGCCCAGGTGAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGCCTACCCTTCTCCTTaGGTGTGTGAACACACAGGC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVAYPSP*VCEHTG
Trigger: GCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGCCTACCCTTCTCCTTaGGTGTGTGAACACACAGGC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKAYPSP*VCEHTG
Trigger: GCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS GCA 90 bp ATATCGACAAAGGCTTTGAGATGGTTCACCTCAATAAAGGCACGGTaGCCTCGTGGGTCTGGAGAAGACTGTGAACCTGGGGCGCAAATG +
Preference number: 5 (lower is better)
Translates to: ISTKALRWFTSIKAR*PRGSGEDCEPGAQM
Trigger: CATTTGCGCCCCAGGTTCACAGTCTTCTCCAGACCCACGAGGGCACCGTGCCTTTATTGAGGTGAACCATCTCAAAGCCTTTGTCGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546864.2
ENST00000631733.1
CDS CCA 90 bp CTAGACTGGTCGCCAATAACAACGTGGTCTCCTTCCCTGTTCCTTTaGTTCCACAGCCATTACACAGAGGGACAGCAAGAGGTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: LDWSPITTWSPSLFL*FHSHYTEGQQEVQV
Trigger: AACCTGCACCTCTTGCTGTCCCTCTGTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAGTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGACATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: DELESEVRVLLFPGIGISQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGFLLPI*YLWRLF
Trigger: GAATAGCCTCCACAGATACAAAATTGGCAGCAAAAA...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: DELESEVRVLLFPGIGISSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...GGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCCTACCCTTCTCCTTaGGTGTGTGAACACACAGGC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAAYPSP*VCEHTG
Trigger: GCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCTCGCCTACCCTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCATGGGAAAGGGGGTTTaGGTGATAACTTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: PSPTLLLWCVNTQASGTGMGKGV*VITFVI
Trigger: AATGACAAAAGTTATCACCAAAACCCCCTTTCCCAT...GCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGCGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp AGCAACTGGGCAGTGAGAGATCGCAGAGACTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCTATATCGGCAACCCAGCAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: SNWAVRDRRDFRLIS*ICLPDSISATQQSP
Trigger: AGGGCTTTGCTGGGTTGCCGATATAGAATCTGGCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS GCA 90 bp TTGCCTCTGTCATCTCCGACGACATCCTCCTGTGTTCAATTTCACTaGAGACACCCATCTCCAGGGTCACAGTGCAAACCTGTCATTACC +
Preference number: 5 (lower is better)
Translates to: LPLSSPTTSSCVQFH*RHPSPGSQCKPVIT
Trigger: GGTAATGACAGGTTTGCACTGTGACCCTGGAGATGGGTGTCTGCAGTGAAATTGAACACAGGAGGATGTCGTCGGAGATGACAGAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCCAGGCCCTTTGTTTaGATTCCCGACTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPRPFV*IPDSAA
Trigger: AGCTGCGGAGTCGGGAATCAAAACAAAGGGCCTGGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGTTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTGTTGCTGACGCTCTaGCCATCCTTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLLLTL*PSLFAG
Trigger: ACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVRRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTTTATCCAGACCACCTGTGGAATTGCTCCCAAGAGCTCCTCCACGCTGCTGTGGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: FYPDHLWNCSQELLHAAVDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...CACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCTGGATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTAAGTGGATCAACCTaGGCCTTCCTATGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLSGST*AFLCVG
Trigger: ACCTACACATAGGAAGGCCAAGGTTGATCCACTTAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGACTGGGGCCATGTGTaGAGAACTGGGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIDWGHV*RTGSHW
Trigger: CCAGTGACTCCCAGTTCTCAACACATGGCCCCAGTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CTGCAGACTCGGAAACTGATGCAGCTTGTGCACATTACCATGACATaGCTGGAAGTGGAGTTTTCCACAACAGGGCAGGTGTTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: LQTRKLMQLVHITMT*LEVEFSTTGQVFAG
Trigger: TCCTGCAAACACCTGCCCTGTTGTGGAAAACTCCACTTCCAGTCATGTCATGGTAATGTGCACAAGCTGCATCAGTTTCCGAGTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 90 bp CAAACCGGAGGTACCACATTAAGGTGCAAAGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGTGAAATGTGCTCTTCCAAATGCCCT +
Preference number: 5 (lower is better)
Translates to: QTGGTTLRCKELVHK*GVSSDCEMCSSKCP
Trigger: AGGGCATTTGGAAGAGCACATTTCACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTCTTTGCACCTTAATGTGGTACCTCCGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 90 bp TTGGTTCCACAGCCATTACACAGAGGGACAGCAAGAGGTGCAGGTTaGGTATTTGGAGGTGGTATATTTGGCCAGACTTTAGCCGCATCG +
Preference number: 5 (lower is better)
Translates to: LVPQPLHRGTARGAG*VFGGGIFGQTLAAS
Trigger: CGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCTCTGTGTAATGGCTGTGGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 90 bp CACCTCAATAAAGGCACGGTGCCCTCGTGGGTCTGGAGAAGACTGTaGACCTGGGGCGCAAATGTCTTCAAAGAAAGAATCACAAAAGGA +
Preference number: 5 (lower is better)
Translates to: HLNKGTVPSWVWRRL*TWGANVFKERITKG
Trigger: TCCTTTTGTGATTCTTTCTTTGAAGACATTTGCGCCCCAGGTTCACAGTCTTCTCCAGACCCACGAGGGCACCGTGCCTTTATTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546864.2
ENST00000631733.1
CDS TCA 90 bp GGTCTCAATAAAGGCACGGTGCCCTCGTGGGTCTGGAGAAGACTGTaGACCTGGGGCGCAAATGTCTTCAAAGAAAGAATCACAAAAGGA +
Preference number: 5 (lower is better)
Translates to: GLNKGTVPSWVWRRL*TWGANVFKERITKG
Trigger: TCCTTTTGTGATTCTTTCTTTGAAGACATTTGCGCCCCAGGTTCACAGTCTTCTCCAGACCCACGAGGGCACCGTGCCTTTATTGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS GCA 90 bp ACACAAGAACCACTGTGGCTGGAGCAGTGTGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTTTATCATCAGCGGCATTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: TQEPLWLEQCVYLQI*GDSAAVYHQRHSLQ
Trigger: CTGCAAAGAATGCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCCAGCCACAGTGGTTCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp TGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGGATCAGCTaGGGGTTACCTACAGGACTCTTCGAACGCAGAAGCCAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: WLFSKSITSLLNWIS*GLPTGLFERRSQGS
Trigger: TGACCCTTGGCTTCTGCGTTCGAAGAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS CCA 90 bp CAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCTACAGGACTCTTCGAACGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: QDGWLFSKSITSLLN*ISWGLPTGLFERRS
Trigger: GCTTCTGCGTTCGAAGAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp TGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGGATCAGCTaGGGGTTACCTACAGGACTCTTCGAACGCAGAAGCCAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: WLFSKSITSLLNWIS*GLPTGLFERRSQGS
Trigger: AGACCCTTGGCTTCTGCGTTCGAAGAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCCCAGGCCCTTTGTTTaGATTCCCGACTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANPRPFV*IPDSAA
Trigger: AGCTGCGGAGTCGGGAATCAAAACAAAGGGCCTGGG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AAGGGTCAGCAGACGTTTGGAGCCCATTCCAAGAATCTGCAATACATGAGGCACGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: KGQQTFGAHSKNLQYMRHAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...GTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKCWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCTGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: RRSLTNWAARALNRSTSVCWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCTGTTGCTGACGCTCTaGCCATCCTTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLLLLTL*PSLFAG
Trigger: ACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAG...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGTTGCTGACGCTCTaGCCATCCTTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALLLTL*PSLFAG
Trigger: ACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRRLSL*LTLLPS
Trigger: GGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKISKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: CQILYRQPSRHGRVSELKQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTANFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CAAATGGGTCTGGGCAGTCGGCTTCGCTGCTCGAATTTGCAATGTTaGAAGCAAGCGGGGATGCTCTGTTTAAAAGGTTTGGAGACATAC +
Preference number: 5 (lower is better)
Translates to: QMGLGSRLRCSNLQC*KQAGMLCLKGLETY
Trigger: GTATGTCTCCAAACCTTTTAAACAGAGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAGCAGCGAAGCCGACTGCCCAGACCCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 90 bp AAGCTCAATAAAGGCACGGTGCCCTCGTGGGTCTGGAGAAGACTGTaGACCTGGGGCGCAAATGTCTTCAAAGAAAGAATCACAAAAGGA +
Preference number: 5 (lower is better)
Translates to: KLNKGTVPSWVWRRL*TWGANVFKERITKG
Trigger: TCCTTTTGTGATTCTTTCTTTGAAGACATTTGCGCCCCAGGTTCACAGTCTTCTCCAGACCCACGAGGGCACCGTGCCTTTATTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552535.1
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000634121.1
CDS GCA 90 bp ACTGTGGCTGGAGCAGTGTGTGTATTTGCAAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCGGCATTCTTTGCAGTAGCATTGATG +
Preference number: 5 (lower is better)
Translates to: TVAGAVCVFANLRRL*RSLSSAAFFAVALM
Trigger: CATCAATGCTACTGCAAAGAATGCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCCAGCCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 90 bp CTTCTGAGCGCGCTCTGCACTATCTTGGTTTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACTCAGCACTTTCCCACCACAATTATC +
Preference number: 5 (lower is better)
Translates to: LLSALCTILVYEAEN*TAACDTQHFPTTII
Trigger: GATAATTGTGGTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp CTGCAACTTCTGGTGACCCAAATTTTGAAGCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGGTCTCCTTCCCTGTTCCTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: LQLLVTQILKQLCLD*SPITTWSPSLFLWF
Trigger: GAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAGAAGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CTGAATGAGATCAGCAGATTGGAGGATAACGGGGTCTGGTCTCAGCTGAGGGGATCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: LNEISRLEDNGVWSQLRGSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...TCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCACCACCAAAACGCATaGGCGAAGTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIHHQNA*AKWRVH
Trigger: ATGAACCCTCCACTTCGCCAATGCGTTTTGGTGGTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTACWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAAT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVNFEAA*PRLVAN
Trigger: ATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAAT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKNFEAA*PRLVAN
Trigger: ATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAAT +
Preference number: 5 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWNFEAA*PRLVAN
Trigger: ATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATT...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATTTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAEQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVFLLPI*YLWRLF
Trigger: GAATAGCCTCCACAGATACAAAATTGGCAGCAAAAA...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCAGCCGTCCGTTTCCTaGTTCACGGATTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIQPSVS*FTDCDR
Trigger: ACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCGCTGAAATCCTTATaGGAACAATGCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSLKSL*EQCCLQ
Trigger: CTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCGCTGAAATCCTTATaGGAACAATGCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSLKSL*EQCCLQ
Trigger: CTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATGGGCAGCTAGAGCTTaGAACCGCTCCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVWAARA*NRSTSV
Trigger: GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGACATGCCACGCACTGGGTTAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: THRLAGQALLQRHATHWVKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...AACCCAGTGCGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: CQILYRQPSRHGRVSELKFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTADSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGACTGGGGCCATGTGTaGAGAACTGGGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVDWGHV*RTGSHW
Trigger: CCAGTGACTCCCAGTTCTCAACACATGGCCCCAGTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCAAAGAACCTGTTCTTaGAGTCTGTTCCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVQRTCS*SLFQVT
Trigger: AGTCACCTGGAACAGACTCAAAGAACAGGTTCTTTG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS GCA 90 bp TGTTCCTTTGGTTCCACAGCCATTACACAGAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGGTGGTATATTTGGCCAGACTTTAGC +
Preference number: 5 (lower is better)
Translates to: CSFGSTAITQRDSKR*RLSIWRWYIWPDFS
Trigger: GCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCTCTGTGTAATGGCTGTGGAACCAAAGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 90 bp AAATCTGCGGAGACTCTGCCGCAGTTTATCATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGCAACGGTTACCTGGCAATTATTCAG +
Preference number: 5 (lower is better)
Translates to: KSAETLPQFIISGIL*SSIDVGNGYLAIIQ
Trigger: CTGAATAATTGCCAGGTAACCGTTGCCCACATCAATGCTACTGCAAAGAATGCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp CAAATTTTGAAGCAGCTTTGCCTAGACTGGTCGCCAATAACAACGTaGTCTCCTTCCCTGTTCCTTTGGTTCCACAGCCATTACACAGAG +
Preference number: 5 (lower is better)
Translates to: QILKQLCLDWSPITT*SPSLFLWFHSHYTE
Trigger: CTCTGTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp GTCCAGCTACTGCAACTTCAAATTTTGAAGCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGGTCTCCTTCCCTGTTCCTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: VQLLQLQILKQLCLD*SPITTWSPSLFLWF
Trigger: GAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATTTGAAGTTGCAGTAGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548025.5
ENST00000632465.1
CDS CCA 90 bp AGGGACAGCAAGAGGTGCAGGTTGAGTATTTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATCGATTATGCTATTTCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RDSKRCRLSIWRWYI*PDFSRIDYAISCWL
Trigger: CAGCCAGCAAGAAATAGCATAATCGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCTTAGCATCATTATCTaGTTGAAGCCATCCACGTGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLSIII*LKPSTC
Trigger: ACACGTGGATGGCTTCAACAAGATAATGATGCTAAG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKISFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCAGCCTCAGGTGACCTaGCTGGTGCTCACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMQPQVT*LVLTVS
Trigger: AGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSTLQH*SYREWV
Trigger: TACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTARRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: RRSLTNWAARALNRSTSVETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGATGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: PIVRKFALPAKVVMVRRDETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...ATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGTCGCTGAAATCCTTATaGGAACAATGCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRSLKSL*EQCCLQ
Trigger: CTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: DRRSLTNWAARALNRSTSHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGACCACCTGTGGAATaGCTCCCAAGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRPPVE*LPRAPP
Trigger: TGGAGGAGCTCTTGGGAGCAATTCCACAGGTGGTCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTASEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCTTTCCACGGGGTCCTaGCTGAGCAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLSTGS*LSSDSE
Trigger: CTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GATGCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: DAGRAGVRGQSFALSWYWKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...CCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCCTACCCTTCTCCTTaGGTGTGTGAACACACAGGC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMAYPSP*VCEHTG
Trigger: GCCTGTGTGTTCACACACCAAAGGAGAAGGGTAGGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCCAGTGGAAATCGTATaGATCCCGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSPVEIV*IPLLLK
Trigger: CTTCAGCAGCAGCGGGATCAATACGATTTCCACTGG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CGAATATCAGGAAGTGGGACTGCTGGAAAAAGCTTAGAGCCAGCATaGAGGGGTGATGGTACATCCTTTAGTTCCACAGCAACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RISGSGTAGKSLEPA*RGDGTSFSSTATFL
Trigger: CAAGAAAGTTGCTGTGGAACTAAAGGATGTACCATCACCCCTTCATGCTGGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS GCA 90 bp TTGTTCTCCATGTACTCTTTCGTTTGGGGACTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAATTAGAGAATTTCCAAAGCCATGGC +
Preference number: 5 (lower is better)
Translates to: LFSMYSFVWGLCGSV*SGREKQLENFQSHG
Trigger: GCCATGGCTTTGGAAATTCTCTAATTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACGAAAGAGTACATGGAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS GCA 90 bp ATTACCAAAGACATCTTCGTTTTCCATTCGCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAAGCGGAGAATTGCACTGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: ITKDIFVFHSLLSAL*TILVYEAENCTAAC
Trigger: ACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAACGAAGATGTCTTTGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp AGGGACAGCAAGAGGTGCAGGTTGAGTATTTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATCGATTATGCTATTTCTTGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: RDSKRCRLSIWRWYI*PDFSRIDYAISCWL
Trigger: AAGCCAGCAAGAAATAGCATAATCGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCTGAGTTAAAGGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: CQILYRQPSRHGRVSELKAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...CTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKCWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGAAAGATGGGTGGTTCCTTCCCAAGACATCAACAATACCAGCAACTGGGCAGTAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAAT +
Preference number: 5 (lower is better)
Translates to: RKMGGSFPRHQQYQQLGSNFEAA*PRLVAN
Trigger: ATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATT...ACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGGAAGGAACCACCCATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTTGCACAACAGCAGTaGCTGACCGGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRFAQQQ*LTGQRE
Trigger: TTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCTTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKEQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGTTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLSTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTCACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRSKESD*LAAPVA
Trigger: TGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTALLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GACCGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: DRRSLTNWAARALNRSTSKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...AGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACATCCGGAAATGGGGTaGGTGACGCAGCAAATCAAC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHPEMG*VTQQIN
Trigger: GTTGATTTGCTGCGTCACCAACCCCATTTCCGGATG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAGGAGTTTAACAAACTGGGCAGCTAGAGCTTTGAACCGCTCCACCTCTGTCAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: RRSLTNWAARALNRSTSVKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...GACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTCCAACCTGAAAATACACTCCGAACCCCTCGCCTACCCTTCTCCTTTGGTGTGAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: FQPENTLRTPRLPFSFGVKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...CACACCAAAGGAGAAGGGTAGGCGAGGGGTTCGGAGTGTATTTTCAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTTTTGGGTTGCTTTTaGGCCGGGCTTTCCACGGGG +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRFLGCF*AGLSTG
Trigger: CCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTGAACTTGATTCTTCTTaGTCTGTTGCCCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAELDSS*SVAQRT
Trigger: GGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTC...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATTTTCAGACAGCAATaGTTAAGAGTCACACACACG +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKIFRQQ*LRVTHT
Trigger: CGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGATGGGAAAGGGGGTTTaGGTGATAACTTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKMGKGV*VITFVI
Trigger: AATGACAAAAGTTATCACCAAAACCCCCTTTCCCAT...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCACAGCAGCTTACTTaGGGGACAGAAGAAAGCTGT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMAQQLT*GTEESC
Trigger: ACAGCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTGCTGGGAAAGTCACTaGCAATGCCTGCCAAATTGT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSCWESH*QCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACAC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSFPVP*VPQPLH
Trigger: GTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTCTTGCCATCCTTATTaGCTGGTAGGTTATAAACAT +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKSCHPY*LVGYKH
Trigger: ATGTTTATAACCTACCAGCAAATAAGGATGGCAAGA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTGTTGCTGACGCTCTaGCCATCCTTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLLLTL*PSLFAG
Trigger: ACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCCTGTTGCTGACGCTCTaGCCATCCTTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSLLLTL*PSLFAG
Trigger: ACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAG...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTTTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFPGVA*ALEDCS
Trigger: TGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIRRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSRRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANLEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGGACATCAGCACCATTaGCAAATGGGTCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRGHQHH*QMGLGS
Trigger: ACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGTCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELSTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AAATTTATTAAAGGGCATCCGGAAATGGGGTTGGTGACGCAGCAAATCAACGACACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: KFIKGHPEMGLVTQQINDTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...GTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTCACAATGACCTGTTaGCTGGCCTGGGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLTMTC*LAWDLR
Trigger: TCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AAACCCATAGTACGCAAGTTTGCACTGCCGGCCAAAGTGGTGATGGTAAGAAGGCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: KPIVRKFALPAKVVMVRRHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...CCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCAGGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: AGRAGVRGQSFALSWYWNPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...ATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTATDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GGACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: GRAGVRGQSFALSWYWNLTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...GAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTCCGTCAGCTCCAAGCTaGAGTTCCGAGGCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: RNGTDIIVLETKCITKSFPSAPS*SSEAVC
Trigger: GCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGG...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAATGAGATCAGCAGATaGGAGGATAACGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNEISR*EDNGVW
Trigger: CCAGACCCCGTTATCCTCCAATCTGCTGATCTCATT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAATCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCAAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000551878.1
ENST00000552553.5
ENST00000633549.1
ENST00000633811.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCTAGCGGGACAGGCTTaGCTTCAAAGACATGCCACG +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLAGQA*LQRHAT
Trigger: CGTGGCATGTCTTTGAAGCAAAGCCTGTCCCGCTAG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACCAGTGGAAATCGTATaGATCCCGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRPVEIV*IPLLLK
Trigger: CTTCAGCAGCAGCGGGATCAATACGATTTCCACTGG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTAAGTGGATCAACCTaGGCCTTCCTATGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLSGST*AFLCVG
Trigger: ACCTACACATAGGAAGGCCAAGGTTGATCCACTTAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACAAAGAACCTGTTCTTaGAGTCTGTTCCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKQRTCS*SLFQVT
Trigger: AGTCACCTGGAACAGACTCAAAGAACAGGTTCTTTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCAAAGAACCTGTTCTTaGAGTCTGTTCCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIQRTCS*SLFQVT
Trigger: AGTCACCTGGAACAGACTCAAAGAACAGGTTCTTTG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACCGCTATTTTCAGACAGCAATaGTTAAGAGTCACACACACG +
Preference number: 5 (lower is better)
Translates to: YATCRMTPPTWLNGSKTAIFRQQ*LRVTHT
Trigger: CGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAAT...AGCGGTTTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTTCTCCTTTGGTGTGTGAACACACAGGCTAGCGGGACAGGCTTTGCTTCAAAGTTTATTGACAACTGTTaGGTCCCAACACACAAAACA +
Preference number: 5 (lower is better)
Translates to: LLLWCVNTQASGTGFASKFIDNC*VPTHKT
Trigger: TGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAAA...CTTTGAAGCAAAGCCTGTCCCGCTAGCCTGTGTGTTCACACACCAAAGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CTCTTCAAATCTGATCAGCTCGTTAGCATGATGCAGCAGTGCTTCTaGGGCCTGGTTTTTATGGACCAAAATAATGTGGAAACCATGCCT +
Preference number: 5 (lower is better)
Translates to: LFKSDQLVSMMQQCF*GLVFMDQNNVETMP
Trigger: AGGCATGGTTTCCACATTATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCATGCTAACGAGCTGATCAGATTTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 90 bp GGCAAGTCGGAAATGAACTCTTCAAATCTGATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAGGCCTGGTTTTTATGGACCAAAATA +
Preference number: 5 (lower is better)
Translates to: GKSEMNSSNLISSLA*CSSASEAWFLWTKI
Trigger: TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCATGCTAACGAGCTGATCAGATTTGAAGAGTTCATTTCCGACTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp ATTACACAGAGGGACAGCAAGAGGTGCAGGTTGAGTATTTGGAGGTaGTATATTTGGCCAGACTTTAGCCGCATCGATTATGCTATTTCT +
Preference number: 5 (lower is better)
Translates to: ITQRDSKRCRLSIWR*YIWPDFSRIDYAIS
Trigger: AGAAATAGCATAATCGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCTCTGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACTTAGCATCATTATCTaGTTGAAGCCATCCACGTGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKLSIII*LKPSTC
Trigger: ACACGTGGATGGCTTCAACAAGATAATGATGCTAAG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGCATGTACTCTTTCGTTaGGGGACTATGTGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRHVLFR*GTMWQR
Trigger: ACGCTGCCACATAGTCCCCAAACGAAAGAGTACATG...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTC +
Preference number: 5 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRAMPAK*FLAEAF
Trigger: GAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGC...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TCTCTCACAATGACCTGTTTGCTGGCCTGGGATTTGAGAAGTTTTAGTAAATCCTTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: SLTMTCLLAWDLRSFSKSFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAACAGGTCATTGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVEQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGAGCAGTGTGTGTATTaGCAAATCTGCGGAGACTCT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVEQCVY*QICGDS
Trigger: AGAGTCTCCGCAGATTTGCAAATACACACACTGCTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMALCTI*VYEAEN
Trigger: ATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGCAGTTCGGTCAAGGTCATGAATCCATATTCACAGGGGTTAAGGGGAGTGTTGTTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SSSVKVMNPYSQGLRGVLFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...CAACACTCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGCTCGAATTTGCAATGTaGAAAGCAAGCGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELLEFAM*KASGDA
Trigger: AGCATCCCCGCTTGCTTTCAACATTGCAAATTCGAG...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCACAACAGCCTTGAGTaGATAATCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIHNSLE*IICMGA
Trigger: AGCCCCCATACAGATTATCAACTCAAGGCTGTTGTG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCGCTGAAATCCTTATaGGAACAATGCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSLKSL*EQCCLQ
Trigger: CTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVITLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACACTCGGCACTGCTTaGCAAAATGATGGTGATAGG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTLGTA*QNDGDR
Trigger: CCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGGACAAGCAGATGGTaGTGTCTGGAATCTCTGATA +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGTSRW*CLESLI
Trigger: TATCAGAGATTCCAGACACAACCATCTGCTTGTCCC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAATTTCAGAAGGCTCTaGAGGGCGCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRNFRRL*RALLKL
Trigger: CAGTTTGAGGAGCGCCCTCAAGAGCCTTCTGAAATT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGACTCTATTTTTGGGTaGCTTTTTGGCCGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVDSIFG*LFGRAF
Trigger: GAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCCAGTGGAAATCGTATaGATCCCGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNPVEIV*IPLLLK
Trigger: CTTCAGCAGCAGCGGGATCAATACGATTTCCACTGG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp ACAATGATCCTATTACCAAAGACATCTTCGTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCTTGGTTTATGAAGCGGAGAATTGCA +
Preference number: 5 (lower is better)
Translates to: TMILLPKTSSFSIRF*ARSALSWFMKRRIA
Trigger: TGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAACGAAGATGTCTTTGGTAATAGGATCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 90 bp CGTCTGCTCAGGACGAGAAAAGCAATTAGAGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTGTTGAAGCCATCCACGTGTTCTACT +
Preference number: 5 (lower is better)
Translates to: RLLRTRKAIREFPKP*LSIIILLKPSTCST
Trigger: AGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTCTCTAATTGCTTTTCTCGTCCTGAGCAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCTTAGCATCATTATCTaGTTGAAGCCATCCACGTGT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLLSIII*LKPSTC
Trigger: ACACGTGGATGGCTTCAACAAGATAATGATGCTAAG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACTCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAACGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAAT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNFEAA*PRLVAN
Trigger: ATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAAT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNFEAA*PRLVAN
Trigger: ATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACGAGCTGGAGTCAGAGGTCAGAGTTTTGCTCTTTCCTGGTATTGGAATCTCCATCTTGCCATCCTTATTaGCTGGTAGGTTATAAACAT +
Preference number: 5 (lower is better)
Translates to: TSWSQRSEFCSFLVLESPSCHPY*LVGYKH
Trigger: ATGTTTATAACCTACCAGCAAATAAGGATGGCAAGA...TGGAGATTCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGACTCCAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAATTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTCTATGACCAGTTTTaGACTCCATGCGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRFYDQF*TPCGTA
Trigger: AGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAGACGGGTAACTCACTaGGAATACAGTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRRVTH*EYSLLF
Trigger: AAAGAGGAGACTGTATTCCAAGTGAGTTACCCGTCT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTCAACACTCTTCACCTaGCCATGCCTGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNSTLFT*PCLANA
Trigger: AGCATTTGCCAGGCATGGCAAGGTGAAGAGTGTTGA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATCGCTGAAATCCTTATaGGAACAATGCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVSLKSL*EQCCLQ
Trigger: CTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAACATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AAGTTGGCTGCCAATTTGACTCTATTTTTGGGTTGCTTTTTGGCCGGGCTTTCCCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: KLAANLTLFLGCFLAGLSPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...GGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCCACAAGAAACCCAGAGATGCTTCCAACAGCGAGAAGTAACGAGAGTAAAATCAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ATRNPEMLPTARSNESKIKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...GATTTTACTCTCGTTACTTCTCGCTGTTGGAAGCATCTCTGGGTTTCTTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CTCTATTATGCTACATGTAGGATGACACCACCGACGTGGCTCAATGGAAGCAAAAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: LYYATCRMTPPTWLNGSKKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...TTTGCTTCCATTGAGCCACGTCGGTGGTGTCATCCTACATGTAGCATAATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CTGAATCTGTCTGCCAGATTCTATATCGGCAACCTTCACGACATGGCAGAGTTTAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: LNLSARFYIGNLHDMAEFKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...AAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAGTGATGAAGCCACTTTaGTCAACTACAGACATAGTT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKVMKPL*STTDIV
Trigger: AACTATGTCTGTAGTTGACAAAAGTGGCTTCATCAC...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTTAAGTGGATCAACCTaGGCCTTCCTATGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVILSGST*AFLCVG
Trigger: ACCTACACATAGGAAGGCCAAGGTTGATCCACTTAA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTAAGTGGATCAACCTaGGCCTTCCTATGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMLSGST*AFLCVG
Trigger: ACCTACACATAGGAAGGCCAAGGTTGATCCACTTAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACAAAGAACCTGTTCTTaGAGTCTGTTCCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVQRTCS*SLFQVT
Trigger: AGTCACCTGGAACAGACTCAAAGAACAGGTTCTTTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGAACTTGATTCTTCTTaGTCTGTTGCCCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSELDSS*SVAQRT
Trigger: GGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACGAACTTGATTCTTCTTaGTCTGTTGCCCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANELDSS*SVAQRT
Trigger: GGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTC...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AGACACACTCACGGGACAGCACAGAACTTGATTCTTCTTTGTCTGTTGCCCAAAATGGGAAAGGGGGTTTaGGTGATAACTTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: RHTHGTAQNLILLCLLPKMGKGV*VITFVI
Trigger: AATGACAAAAGTTATCACCAAAACCCCCTTTCCCAT...TTTGGGCAACAGACAAAGAAGAATCAAGTTCTGTGCTGTCCCGTGAGTGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp CAATTAGAGAATTTCCAAAGCCATGGCTTAGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTACTGCAGGAGTTCTCAGTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: QLENFQSHGLASLSC*SHPRVLLQEFSVPF
Trigger: AAACGGAACTGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTCTCTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 90 bp TCGCTGAAATCCTTATTGGAACAATGCTGTCTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAATATAATTGGGCTGCAATTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SLKSLLEQCCLQTGS*YSNSSNIIGLQFVE
Trigger: CTCCACGAATTGCAGCCCAATTATATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGATTTCAGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMSTATF*FSMYSF
Trigger: GAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGCTATTTCTTGCTGGCTaGTTTAGACAGTCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRLFLAG*FRQSSQ
Trigger: CTGCGAAGACTGTCTAAACAAGCCAGCAAGAAATAG...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TTAAAGTCCACCACTCTTTACATGCTAGCAGAACTGAAGTCCAAGCGTGCAAACCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: LKSTTLYMLAELKSKRANRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...GTTTGCACGCTTGGACTTCAGTTCTGCTAGCATGTAAAGAGTGGTGGACTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGCAGGTTGAGTATTaGGAGGTGGTATATTTGGCC +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNVQVEY*EVVYLA
Trigger: GGCCAAATATACCACCTCCAAATACTCAACCTGCAC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACC +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNFFAVA*MWATVT
Trigger: GGTAACCGTTGCCCACATCAATGCTACTGCAAAGAA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGTTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTCTATGTTGCTGACTaGGACATCAGCACCATTTGC +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNVYVAD*DISTIC
Trigger: GCAAATGGTGCTGATGTCCAAGTCAGCAACATAGAC...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTC +
Preference number: 5 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLFLLPI*YLWRLF
Trigger: GAATAGCCTCCACAGATACAAAATTGGCAGCAAAAA...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAGAGACCAGGATCTTTTaGCTGCCAATTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVETRIF*LPILYL
Trigger: CAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTC...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTAGGGTCAGCAGACGTTaGGAGCCCATTCCAAGAATC +
Preference number: 5 (lower is better)
Translates to: RNGTDIIVLETKCITKSFRVSRR*EPIPRI
Trigger: GATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCACCATTTCATTATCTaGTTGGGACAAGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMHHFII*LGQADG
Trigger: ACCATCTGCTTGTCCCAACAAGATAATGAAATGGTG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TCCATATTCACAGGGGTTAAGGGGAGTGTTGTGGGTACTTTCGTAATGTCTCTTAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: SIFTGVKGSVVGTFVMSLKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...AAGAGACATTACGAAAGTACCCACAACACTCCCCTTAACCCCTGTGAATATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAAGGCAGTTATCTTTTaGGGACCGAAGGAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVKAVIF*GPKEFN
Trigger: GTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGTCAGAGGTCAGAGTTTaGCTCTTTCCTGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRSEVRV*LFPGIG
Trigger: TCCAATACCAGGAAAGAGCAAAACTCTGACCTCTGA...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAGGTGCTAAGGAAAAGTaGGCTGCCAATTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRGAKEK*AANLTL
Trigger: TAGAGTCAAATTGGCAGCCAACTTTTCCTTAGCACC...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTGTGATGAAGCCACTTTaGTCAACTACAGACATAGTT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSVMKPL*STTDIV
Trigger: AACTATGTCTGTAGTTGACAAAAGTGGCTTCATCAC...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGATGAATCCGCCTTTTTaGCCGGACAAATACAATCCA +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMMNPPF*PDKYNP
Trigger: TGGATTGTATTTGTCCGGCAAAAAAGGCGGATTCAT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCGAACTTGATTCTTCTTaGTCTGTTGCCCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVELDSS*SVAQRT
Trigger: GGTTCTTTGGGCAACAGACAAAGAAGAATCAAGTTC...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTATTTTCAGACAGCAATaGTTAAGAGTCACACACACG +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSIFRQQ*LRVTHT
Trigger: CGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAAT...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CCCAAAAGAAACCATCTAACTAGTGGAAGACCTTACGCCAACAGGTTCTTTCTGATTTTCAGACAGCAATaGTTAAGAGTCACACACACG +
Preference number: 5 (lower is better)
Translates to: PKRNHLTSGRPYANRFFLIFRQQ*LRVTHT
Trigger: CGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAAT...CAGAAAGAACCTGTTGGCGTAAGGTCTTCCACTAGTTAGATGGTTTCTTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp ATCAAGAAAGATATTCACGTGGTCAGATCTTTACATTCTGGGGCATaGGTCTGCTGCAACGAAGACCTCACACATATTTTACATAAAGGG +
Preference number: 5 (lower is better)
Translates to: IKKDIHVVRSLHSGA*VCCNEDLTHILHKG
Trigger: CCCTTTATGTAAAATATGTGTGAGGTCTTCGTTGCAGCAGACTCATGCCCCAGAATGTAAAGATCTGACCACGTGAATATCTTTCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTCTTGCCATCCTTATTaGCTGGTAGGTTATAAACAT +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSSCHPY*LVGYKH
Trigger: ATGTTTATAACCTACCAGCAAATAAGGATGGCAAGA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TATGACACAAGATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTGTTTGGCACTGGAAGATaGTTCACTTGCATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: YDTRWLAFQQVNHFSTELFGTGR*FTCIFD
Trigger: ATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAA...CAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTC +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVFLLPI*YLWRLF
Trigger: GAATAGCCTCCACAGATACAAAATTGGCAGCAAAAA...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMFLLPI*YLWRLF
Trigger: GAATAGCCTCCACAGATACAAAATTGGCAGCAAAAA...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACCTGAAGAACAGACATaGTTTCTGCACTCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRPEEQT*FLHSVK
Trigger: CTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGATTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CGAAGTCTTCTCTCTCATTTTCAGACAGCAATTGTTAAGAGTCACACACACGTCCATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: RSLLSHFQTAIVKSHTHVHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...GACGTGTGTGTGACTCTTAACAATTGCTGTCTGAAAATGAGAGAGAAGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACATTTCATTATCTTGTaGGGACAAGCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVHFIIL*GQADGC
Trigger: ACAACCATCTGCTTGTCCCAACAAGATAATGAAATG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCCCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTACCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTAACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp TGGGTTAATACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: WVNTVGNTSKQRLRDSIMKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...CATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGTATTAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAAGTTGGCTGCCAATTaGACTCTATTTTTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRKLAAN*TLFLGC
Trigger: GCAACCCAAAAATAGAGTCAAATTGGCAGCCAACTT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCGTGATGAAGCCACTTTaGTCAACTACAGACATAGTT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIVMKPL*STTDIV
Trigger: AACTATGTCTGTAGTTGACAAAAGTGGCTTCATCAC...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCATGGGAAAGGGGGTTTaGGTGATAACTTTTGTCATT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVIMGKGV*VITFVI
Trigger: AATGACAAAAGTTATCACCAAAACCCCCTTTCCCAT...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GTGGCTCAATGGAAGCAAAACCGCTTCCTGCTAGTTGAGTTTTTAGTGCTTTCTTTTATTGACAACTGTTaGGTCCCAACACACAAAACA +
Preference number: 5 (lower is better)
Translates to: VAQWKQNRFLLVEFLVLSFIDNC*VPTHKT
Trigger: TGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAAA...AGAAAGCACTAAAAACTCAACTAGCAGGAAGCGGTTTTGCTTCCATTGAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS TCA 90 bp TCTTATAGAAAAGAATTACTTCTAAAGGAAAACGAACGGCACACCTaGAATCCTTATTGGAACAATGCTGTCTGCAGACAGGCTCGTGAT +
Preference number: 5 (lower is better)
Translates to: SYRKELLLKENERHT*NPYWNNAVCRQARD
Trigger: ATCACGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGATTTCAGGTGTGCCGTTCGTTTTCCTTTAGAAGTAATTCTTTTCTATAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552535.1
ENST00000634121.1
CDS TCA 90 bp TTTTACATAAAGGGTAGCAAAGTCTCACTTGAACACCAATGTGACTaGGGCCAAGCTTCAGGTTTCCCACATTATTGCAAAAAGACAACA +
Preference number: 5 (lower is better)
Translates to: FYIKGSKVSLEHQCD*GQASGFPHYCKKTT
Trigger: TGTTGTCTTTTTGCAATAATGTGGGAAACCTGAAGCTTGGCCTCAGTCACATTGGTGTTCAAGTGAGACTTTGCTACCCTTTATGTAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS-3UTR CAA 90 bp TATTCTGTAAGGAGATCTGTCATCATAAGGCAGTTATCTTTTTGGGACCGAAGGCGATTATGCTATTTCTaGCTGGCTTGTTTAGACAGT +
Preference number: 5 (lower is better)
Translates to: YSVRRSVIIRQLSFWDRRRLCYF*LACLDS
Trigger: ACTGTCTAAACAAGCCAGCAAGAAATAGCATAATCG...CCTTCGGTCCCAAAAAGATAACTGCCTTATGATGACAGATCTCCTTACAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTCTGGTGACCCAAATTTaGAAGCAGCTTTGCCTAGAC +
Preference number: 5 (lower is better)
Translates to: RNGTDIIVLETKCITKSFLVTQI*KQLCLD
Trigger: GTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp AATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATGTGTGTTGTAATCTCTTGCCATCCTTATTaGCTGGTAGGTTATAAACAT +
Preference number: 5 (lower is better)
Translates to: NQALSNAASRHTIMCVVISCHPY*LVGYKH
Trigger: ATGTTTATAACCTACCAGCAAATAAGGATGGCAAGA...GATTACAACACACATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396368.8
ENST00000621511.2
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATTTGCTGGCCTGGGATTaGAGAAGTTTTAGTAAATCC +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNLLAWD*RSFSKS
Trigger: GGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAA...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACCTTGGAGAACTGTTTaGTCCTTTCTATTTCATCCT +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRPWRTV*SFLFHP
Trigger: AGGATGAAATAGAAAGGACAAAACAGTTCTCCAAGG...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAACTGACATCATAGTCTaGGAGACGAAATGTATAACC +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRTDIIV*ETKCIT
Trigger: GGTTATACATTTCGTCTCCAAGACTATGATGTCAGT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ATGCACTTGATGCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGAAAGACCGCACATTCTTaGCAAACAAATACAGACTTG +
Preference number: 5 (lower is better)
Translates to: MHLMHILENQALSNAASRKTAHS*QTNTDL
Trigger: CAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT...TCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGCATCAAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAATTTGACTCTATTTTaGGGTTGCTTTTTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNNLTLF*GCFLAG
Trigger: CCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp ACTGTCGGAAACACCAGTAAGCAAAGGCTGAGAGACTCTATTATGCTACATGTATTTATTGACAACTGTTaGGTCCCAACACACAAAACA +
Preference number: 5 (lower is better)
Translates to: TVGNTSKQRLRDSIMLHVFIDNC*VPTHKT
Trigger: TGTTTTGTGTGTTGGGACCAAACAGTTGTCAATAAA...TACATGTAGCATAATAGAGTCTCTCAGCCTTTGCTTACTGGTGTTTCCGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS-3UTR CAA 90 bp CGAAATGGAACTGACATCATAGTCTTGGAGACGAAATGTATAACCAAAAGTTTTTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: RNGTDIIVLETKCITKSFFLVHG*RPCLLI
Trigger: AATTAACAGACACGGTCGCAATCCGTGAACAAGGAA...AAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAGTTCCATTTCG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000552553.5
ENST00000633811.1
CDS-3UTR CAA 90 bp GCATATTTTAGAAAATCAGGCTCTTTCCAATGCTGCCTCTCGACACACAATAATAAATCAACGACATCCTaGGAGAACTGTTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: AYFRKSGSFQCCLSTHNNKSTTS*ENCFVL
Trigger: AAGGACAAAACAGTTCTCCAAGGATGTCGTTGATTT...ATTATTGTGTGTCGAGAGGCAGCATTGGAAAGAGCCTGATTTTCTAAAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000621511.2
ENST00000631398.1
CDS GCA 72 bp ACTGGGAAGACCCCAAGGGGCTCTGGCGGGCCTGACTaGTGGGTAGGAGACACACCAGCCGTCCGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: TGKTPRGSGGPD*WVGDTPAVRFL
Trigger: AAGGAAACGGACGGCTGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCCCTTGGGGTCTTCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp CAGGCCCCCTACATGTGCACACCGTCGCCAGGTCACTaGTCTCAGCTCCCAGGCAAGCTTTGCCTGGGTCCT +
Preference number: 6 (lower is better)
Translates to: QAPYMCTPSPGH*SQLPGKLCLGP
Trigger: AGGACCCAGGCAAAGCTTGCCTGGGAGCTGAGATCAGTGACCTGGCGACGGTGTGCACATGTAGGGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CCA 72 bp ACATCCTTGAAGGTTTTGCAACAGGCTCCCCAGGCTTaGGAAGTGGGCCCTGACACGGCCCTCCTCAGCGCG +
Preference number: 6 (lower is better)
Translates to: TSLKVLQQAPQA*EVGPDTALLSA
Trigger: CGCGCTGAGGAGGGCCGTGTCAGGGCCCACTTCCCAAGCCTGGGGAGCCTGTTGCAAAACCTTCAAGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CAA 90 bp TCCCCTCCTTGTCACGTGCTTCCCTCAGGCACATCCTTGAAGGTTTaGCAACAGGCTCCCCAGGCTTGGGAAGTGGGCCCTGACACGGCC +
Preference number: 6 (lower is better)
Translates to: SPPCHVLPSGTSLKV*QQAPQAWEVGPDTA
Trigger: GGCCGTGTCAGGGCCCACTTCCCAAGCCTGGGGAGCCTGTTGCAAAACCTTCAAGGATGTGCCTGAGGGAAGCACGTGACAAGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CAA 90 bp CGGGTTCTGCCACCCCCGAGTTTTTCGGCGTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTACGACCAGCCTCAGGTGACCTTGCT +
Preference number: 6 (lower is better)
Translates to: RVLPPPSFSASTLQH*SYREWVRPASGDLA
Trigger: AGCAAGGTCACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGGGGGTGGCAGAACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp GTCCTGGTGCTTTGCGAGTCTAACAGTGCGCCCGGGTaGATCAAGCTACTGGTACCTCCGCTACCGCCACCA +
Preference number: 6 (lower is better)
Translates to: VLVLCESNSAPG*IKLLVPPLPPP
Trigger: TGGTGGCGGTAGCGGAGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTTAGACTCGCAAAGCACCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 72 bp CACCCCCGAGTTTTTCGGCGTCGACACTGCAGCACTTaGGTTACCGTGAGTGGGTACGACCAGCCTCAGGTG +
Preference number: 6 (lower is better)
Translates to: HPRVFRRRHCST*VTVSGYDQPQV
Trigger: CACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp TCGGCGTCGACACTGCAGCACTTGAGTTACCGTGAGTaGGTACGACCAGCCTCAGGTGACCTTGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SASTLQHLSYRE*VRPASGDLAGA
Trigger: AGCACCAGCAAGGTCACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp CCACCCCCGAGTTTTTCGGCGTCGACACTGCAGCACTaGAGTTACCGTGAGTGGGTACGACCAGCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: PPPSFSASTLQH*SYREWVRPASG
Trigger: ACCTGAGGCTGGTCGTACCCACTCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp TGTCACGTGCTTCCCTCAGGCACATCCTTGAAGGTTTaGCAACAGGCTCCCCAGGCTTGGGAAGTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: CHVLPSGTSLKV*QQAPQAWEVGP
Trigger: AGGGCCCACTTCCCAAGCCTGGGGAGCCTGTTGCAAAACCTTCAAGGATGTGCCTGAGGGAAGCACGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS TCA 72 bp AGCCCTAGGTCATGGCGTGGGGTCTTCCTATCCACCTaGGTCCACCCCTTTCATCATCCTGGGCAACTGAAC +
Preference number: 6 (lower is better)
Translates to: SPRSWRGVFLST*VHPFHHPGQLN
Trigger: GTTCAGTTGCCCAGGATGATGAAAGGGGTGGACTCAGGTGGATAGGAAGACCCCACGCCATGACCTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS GCA 72 bp GGACCTGTCCCACACCACAGCCGTATAGCCTTTCAATaGCTTGCCTCTGTCATCTCCGACGACATCCTCCTG +
Preference number: 6 (lower is better)
Translates to: GPVPHHSRIAFQ*LASVISDDILL
Trigger: CAGGAGGATGTCGTCGGAGATGACAGAGGCAAGGCATTGAAAGGCTATACGGCTGTGGTGTGGGACAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS CCA 72 bp GCCTGCTTCTCTCGGCTCTACCATGGACAGCACCACTaGGGTGCTTTTCAAATGCAAACCTGGGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ACFSRLYHGQHH*GAFQMQTWAPA
Trigger: AGCTGGAGCCCAGGTTTGCATTTGAAAAGCACCCCAGTGGTGCTGTCCATGGTAGAGCCGAGAGAAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS GCA 72 bp GGCGTTAGCTCCGACTGTGAAATGTGCTCTTCCAAATaGCCTGGAGCCCCGCTTGTGAAATCAGAACAGGGG +
Preference number: 6 (lower is better)
Translates to: GVSSDCEMCSSK*PGAPLVKSEQG
Trigger: CCCCTGTTCTGATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACATTTCACAGTCGGAGCTAACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 72 bp TGCATCTGCTCATGTCATCATCCCCTTTGCCCAGAATaGTCTCTCCCCTCCTTGTCACGTGCTTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: CICSCHHPLCPE*SLPSLSRASLR
Trigger: CCTGAGGGAAGCACGTGACAAGGAGGGGAGAGAGCATTCTGGGCAAAGGGGATGATGACATGAGCAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS GCA 72 bp CTTCTCTCGGCTCTACCATGGACAGCACCACTGGGGTaGTTTTCAAATGCAAACCTGGGCTCCAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LLSALPWTAPLG*FSNANLGSSSL
Trigger: GAGAGAGCTGGAGCCCAGGTTTGCATTTGAAAAGCACCCCAGTGGTGCTGTCCATGGTAGAGCCGAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CAA 90 bp ATGCCACTTGTCACAACCCTGCATCTGCTCATGTCATCATCCCCTTaGCCCAGAATGCTCTCTCCCCTCCTTGTCACGTGCTTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: MPLVTTLHLLMSSSP*PRMLSPLLVTCFPQ
Trigger: CTGAGGGAAGCACGTGACAAGGAGGGGAGAGAGCATTCTGGGCAAAGGGGATGATGACATGAGCAGATGCAGGGTTGTGACAAGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS TCA 72 bp AAATGTGCTCTTCCAAATGCCCTGGAGCCCCGCTTGTaGAATCAGAACAGGGGAAATAGCCAGCGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: KCALPNALEPRL*NQNRGNSQRRC
Trigger: GCACCTCCGCTGGCTATTTCCCCTGTTCTGATTTCACAAGCGGGGCTCCAGGGCATTTGGAAGAGCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 72 bp TGTCCCACACCACAGCCGTATAGCCTTTCAATGCCTTaGCTCTGTCATCTCCGACGACATCCTCCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: CPTPQPYSLSMP*LCHLRRHPPVF
Trigger: GAACACAGGAGGATGTCGTCGGAGATGACAGAGGCAAGGCATTGAAAGGCTATACGGCTGTGGTGTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS GCA 72 bp TCACAACCCTGCATCTGCTCATGTCATCATCCCCTTTaGCCAGAATGCTCTCTCCCCTCCTTGTCACGTGCT +
Preference number: 6 (lower is better)
Translates to: SQPCICSCHHPL*PECSLPSLSRA
Trigger: AGCACGTGACAAGGAGGGGAGAGAGCATTCTGGGCAAAGGGGATGATGACATGAGCAGATGCAGGGTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CAA 90 bp CCTAGACTGGTCGCCAATAACAACGTGGTCTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACACAGAGGGACAGCAAGAGGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: PRLVANNNVVSFPVP*VPQPLHRGTARGAG
Trigger: ACCTGCACCTCTTGCTGTCCCTCTGTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAGTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 72 bp CCACTGTGGCTGGAGCAGTGTGTGTATTTGCAAATCTaGGGAGACTCTGCCGCAGTTTATCATCAGCGGCAT +
Preference number: 6 (lower is better)
Translates to: PLWLEQCVYLQI*GDSAAVYHQRH
Trigger: ATGCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCCAGCCACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp TTCCCACCACAATTATCGGACAGGCGTCTGAGCCTGTaGCTGACGCTCTTGCCATCCTTATTTGCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: FPPQLSDRRLSL*LTLLPSLFAGR
Trigger: CCTACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCTGTCCGATAATTGTGGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp GTCGCCAGGTCACTGATCTCAGCTCCCAGGCAAGCTTaGCCTGGGTCCTTCCTACTTCCTCTATTCTACTAT +
Preference number: 6 (lower is better)
Translates to: VARSLISAPRQA*PGSFLLPLFYY
Trigger: ATAGTAGAATAGAGGAAGTAGGAAGGACCCAGGCAAAGCTTGCCTGGGAGCTGAGATCAGTGACCTGGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS CAA 90 bp GCAGCCCCGGTGGCAAGTGAGACCAGGATCTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTCACTGCACCGATCGCATCTTGTAAG +
Preference number: 6 (lower is better)
Translates to: AAPVASETRIFLLPI*YLWRLFTAPIASCK
Trigger: CTTACAAGATGCGATCGGTGCAGTGAATAGCCTCCACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551678.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632094.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 90 bp GCCTCAGGTGACCTTGCTGGTGCTCACTGTTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCTCTGGCATTTTTAGTGGTAACCTGG +
Preference number: 6 (lower is better)
Translates to: ASGDLAGAHCFYDQF*TPCGTALAFLVVTW
Trigger: CCAGGTTACCACTAAAAATGCCAGAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCACCAGCAAGGTCACCTGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540441.6
ENST00000631398.1
CDS TCA 72 bp GAAGATGCAGACTGGAAAGCAAACCCTGACCCTACCTaGCACGTGATTGTCCTGGTGCTTTGCGAGTCTAAC +
Preference number: 6 (lower is better)
Translates to: EDADWKANPDPT*HVIVLVLCESN
Trigger: GTTAGACTCGCAAAGCACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS GCA 72 bp GAGACTCTGCCGCAGTTTATCATCAGCGGCATTCTTTaGAGTAGCATTGATGTGGGCAACGGTTACCTGGCA +
Preference number: 6 (lower is better)
Translates to: ETLPQFIISGIL*SSIDVGNGYLA
Trigger: TGCCAGGTAACCGTTGCCCACATCAATGCTACTGCAAAGAATGCCGCTGATGATAAACTGCGGCAGAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 72 bp GCGCTCTGCACTATCTTGGTTTATGAAGCGGAGAATTaGACTGCAGCCTGTGATACTCAGCACTTTCCCACC +
Preference number: 6 (lower is better)
Translates to: ALCTILVYEAEN*TAACDTQHFPT
Trigger: GGTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp GTCGCCAATAACAACGTGGTCTCCTTCCCTGTTCCTTaGGTTCCACAGCCATTACACAGAGGGACAGCAAGA +
Preference number: 6 (lower is better)
Translates to: VANNNVVSFPVP*VPQPLHRGTAR
Trigger: TCTTGCTGTCCCTCTGTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp AAACGCATTGGCGAAGTGGAGGGTTCATTAGGGCAATaGGCACAGCAGCTTACTTTGGGGACAGAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: KRIGEVEGSLGQ*AQQLTLGTEES
Trigger: GCTTTCTTCTGTCCCCAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACCCTCCACTTCGCCAATGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 72 bp CGGAAACTGATGCAGCTTGTGCACATTACCATGACATaGCTGGAAGTGGAGTTTTCCACAACAGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RKLMQLVHITMT*LEVEFSTTGQV
Trigger: CACCTGCCCTGTTGTGGAAAACTCCACTTCCAGTCATGTCATGGTAATGTGCACAAGCTGCATCAGTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp GGTACCACATTAAGGTGCAAAGAGTTGGTGCACAAGTaGGGCGTTAGCTCCGACTGTGAAATGTGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: GTTLRCKELVHK*GVSSDCEMCSS
Trigger: GGAAGAGCACATTTCACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTCTTTGCACCTTAATGTGGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp GCAGTGAGAGATCGCAGAGACTTTCGGTTGATCAGCTaGATCTGTCTGCCAGATTCTATATCGGCAACCCAG +
Preference number: 6 (lower is better)
Translates to: AVRDRRDFRLIS*ICLPDSISATQ
Trigger: CTGGGTTGCCGATATAGAATCTGGCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGCGATCTCTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547936.1
ENST00000631418.1
CDS GCA 72 bp GGTTCCACAGCCATTACACAGAGGGACAGCAAGAGGTaGAGGTTGAGTATTTGGAGGTGGTATATTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GSTAITQRDSKR*RLSIWRWYIWP
Trigger: TGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTGCTGTCCCTCTGTGTAATGGCTGTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 72 bp CACAAGAACCACTGTGGCTGGAGCAGTGTGTGTATTTaGAAATCTGCGGAGACTCTGCCGCAGTTTATCATC +
Preference number: 6 (lower is better)
Translates to: HKNHCGWSSVCI*KSAETLPQFII
Trigger: GATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCCAGCCACAGTGGTTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp CTGGTGACCCAAATTTTGAAGCAGCTTTGCCTAGACTaGTCGCCAATAACAACGTGGTCTCCTTCCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LVTQILKQLCLD*SPITTWSPSLF
Trigger: GAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp CACTCAGTAAAGAGAGTGATTTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCTTTTTGCTGCCAATTT +
Preference number: 6 (lower is better)
Translates to: HSVKRVICWQPR*QVRPGSFCCQF
Trigger: AAATTGGCAGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp AGCAAGTCAATCACTTCTCTACTGAACTGGATCAGCTaGGGGTTACCTACAGGACTCTTCGAACGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: SKSITSLLNWIS*GLPTGLFERRS
Trigger: GCTTCTGCGTTCGAAGAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp ACCTCAGTAAAGAGAGTGATTTGCTGGCAGCCCCGGTaGCAAGTGAGACCAGGATCTTTTTGCTGCCAATTT +
Preference number: 6 (lower is better)
Translates to: TSVKRVICWQPR*QVRPGSFCCQF
Trigger: AAATTGGCAGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACTGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551678.1
ENST00000632094.1
CDS CAA 72 bp GTTTTCCATTCGCTTCTGAGCGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAATTGCACTGCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: VFHSLLSALCTI*VYEAENCTAAC
Trigger: ACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 90 bp GACATCTTCGTTTTCCATTCGCTTCTGAGCGCGCTCTGCACTATCTaGGTTTATGAAGCGGAGAATTGCACTGCAGCCTGTGATACTCAG +
Preference number: 6 (lower is better)
Translates to: DIFVFHSLLSALCTI*VYEAENCTAACDTQ
Trigger: CTGAGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAACGAAGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp AAACTTCTCACGGATTCTTTGCACAACAGCAGTTGCTaGCCGGCCAGAGGGAACGGAGCAGTTTTCAATATC +
Preference number: 6 (lower is better)
Translates to: KLLTDSLHNSSC*PARGNGAVFNI
Trigger: GATATTGAAAACTGCTCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAAGAATCCGTGAGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp ATGGCTGGCTTTTCAGCAAGTCAATCACTTCTCTACTaGACTGGATCAGCTGGGGGTTACCTACAGGACTCT +
Preference number: 6 (lower is better)
Translates to: MAGFSASQSLLY*TGSAGGYLQDS
Trigger: AGAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp ACTAAGTTCATTATCAGCATCTTAAAGTCCTCTCCCTaGTGGTGCCGCTCTCCATCTCAGCCAAGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: TKFIISILKSSP*WCRSPSQPSRV
Trigger: CACTCTGCTTGGCTGAGATGGAGAGCGGCACCATCAGGGAGAGGACTTTAAGATGCTGATAATGAACTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552771.5
ENST00000632479.1
CDS GCA 72 bp GGAGCAGTGTGTGTATTTGCAAATCTGCGGAGACTCTaGCGCAGTTTATCATCAGCGGCATTCTTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: GAVCVFANLRRL*RSLSSAAFFAV
Trigger: TACTGCAAAGAATGCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp CACATGCTGGGAAAGTCACTTGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTCTGGAGTGAAGATGCA +
Preference number: 6 (lower is better)
Translates to: HMLGKSLAMPAK*FLAEAFWSEDA
Trigger: TGCATCTTCACTCCAGAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp CCAGAATTTGCCTGTGACCCTTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCACTTGCATCTTTGATG +
Preference number: 6 (lower is better)
Translates to: PEFACDPFPGVA*ALEDCSLASLM
Trigger: CATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGTCACAGGCAAATTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp GTGGCAAGTGAGACCAGGATCTTTTTGCTGCCAATTTaGTATCTGTGGAGGCTATTCACTGCACCGATCGCA +
Preference number: 6 (lower is better)
Translates to: VASETRIFLLPI*YLWRLFTAPIA
Trigger: TGCGATCGGTGCAGTGAATAGCCTCCACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTCACTTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551678.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632094.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp GACCTTGCTGGTGCTCACTGTTTCTATGACCAGTTTTaGACTCCATGCGGCACAGCTCTGGCATTTTTAGTG +
Preference number: 6 (lower is better)
Translates to: DLAGAHCFYDQF*TPCGTALAFLV
Trigger: CACTAAAAATGCCAGAGCTGTGCCGCATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCACCAGCAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540441.6
ENST00000631398.1
CDS CAA 90 bp CTCTCTAGACACATGCTGGGAAAGTCACTTGCAATGCCTGCCAAATaGTTCCTAGCTGAGGCATTCTGGAGTGAAGATGCAGACTGGAAA +
Preference number: 6 (lower is better)
Translates to: LSRHMLGKSLAMPAK*FLAEAFWSEDADWK
Trigger: TTTCCAGTCTGCATCTTCACTCCAGAATGCCTCAGCTAGGAACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 90 bp GTAGCAGATCCAGAATTTGCCTGTGACCCTTTTCCAGGCGTGGCTTaGGCACTGGAAGATTGTTCACTTGCATCTTTGATGAGGCACAAT +
Preference number: 6 (lower is better)
Translates to: VADPEFACDPFPGVA*ALEDCSLASLMRHN
Trigger: ATTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGGTCACAGGCAAATTCTGGATCTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 90 bp TGCTGGGTAGGAGACACACCAGCCGTCCGTTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATTTATATAGATCTGACACATTCAACT +
Preference number: 6 (lower is better)
Translates to: CWVGDTPAVRFLVHG*RPCLLIYIDLTHST
Trigger: AGTTGAATGTGTCAGATCTATATAAATTAACAGACACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTGGTGTGTCTCCTACCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 90 bp GAAATAAACAGCTTGCTTGTTTCTTACCTCAGTAAAGAGAGTGATTaGCTGGCAGCCCCGGTGGCAAGTGAGACCAGGATCTTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: EINSLLVSYLSKESD*LAAPVASETRIFLL
Trigger: CAGCAAAAAGATCCTGGTCTCACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACTGAGGTAAGAAACAAGCAAGCTGTTTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551678.1
ENST00000632094.1
CDS TCA 72 bp ACCTACGGAGCCTGCCTTAGGCTAGAATTTAGGAGCTaGGTTACTGCCAAGAAGCATGTTTCTCTACTCTCT +
Preference number: 6 (lower is better)
Translates to: TYGACLRLEFRS*VTAKKHVSLLS
Trigger: AGAGAGTAGAGAAACATGCTTCTTGGCAGTAACTCAGCTCCTAAATTCTAGCCTAAGGCAGGCTCCGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549337.1
ENST00000552771.5
ENST00000631396.1
ENST00000632479.1
CDS GCA 72 bp GGTGTTTGCAGGAAGACAGGTTACTCTCTAGACACATaGTGGGAAAGTCACTTGCAATGCCTGCCAAATTGT +
Preference number: 6 (lower is better)
Translates to: GVCRKTGYSLDT*WESHLQCLPNC
Trigger: ACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGAGTAACCTGTCTTCCTGCAAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS GCA 72 bp GACATCTTCGTTTTCCATTCGCTTCTGAGCGCGCTCTaGACTATCTTGGTTTATGAAGCGGAGAATTGCACT +
Preference number: 6 (lower is better)
Translates to: DIFVFHSLLSAL*TILVYEAENCT
Trigger: AGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAACGAAGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp CTTGTTCTCCATGTACTCTTTCGTTTGGGGACTATGTaGCAGCGTCTGCTCAGGACGAGAAAAGCAATTAGA +
Preference number: 6 (lower is better)
Translates to: LVLHVLFRLGTM*QRLLRTRKAIR
Trigger: TCTAATTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACGAAAGAGTACATGGAGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS CCA 72 bp GTTTGCAGGAAGACAGGTTACTCTCTAGACACATGCTaGGAAAGTCACTTGCAATGCCTGCCAAATTGTTCC +
Preference number: 6 (lower is better)
Translates to: VCRKTGYSLDTC*ESHLQCLPNCS
Trigger: GGAACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGAGTAACCTGTCTTCCTGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp TGGCTTTTCAGCAAGTCAATCACTTCTCTACTGAACTaGATCAGCTGGGGGTTACCTACAGGACTCTTCGAA +
Preference number: 6 (lower is better)
Translates to: WLFSKSITSLLN*ISWGLPTGLFE
Trigger: TTCGAAGAGTCCTGTAGGTAACCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp CGCAGTTTATCATCAGCGGCATTCTTTGCAGTAGCATaGATGTGGGCAACGGTTACCTGGCAATTATTCAGC +
Preference number: 6 (lower is better)
Translates to: RSLSSAAFFAVA*MWATVTWQLFS
Trigger: GCTGAATAATTGCCAGGTAACCGTTGCCCACATCAATGCTACTGCAAAGAATGCCGCTGATGATAAACTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp GGAGACACACCAGCCGTCCGTTTCCTTGTTCACGGATaGCGACCGTGTCTGTTAATTTATATAGATCTGACA +
Preference number: 6 (lower is better)
Translates to: GDTPAVRFLVHG*RPCLLIYIDLT
Trigger: TGTCAGATCTATATAAATTAACAGACACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTGGTGTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CAA 72 bp TGTCCAGCTACTGCAACTTCAAATTTTGAAGCAGCTTaGCCTAGACTGGTCGCCAATAACAACGTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: CPATATSNFEAA*PRLVANNNVVS
Trigger: GGAGACCACGTTGTTATTGGCGACCAGTCTAGGCAAAGCTGCTTCAAAATTTGAAGTTGCAGTAGCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548025.5
ENST00000632465.1
CDS TCA 72 bp ACTTTGGGGACAGAAGAAAGCTGTATTTTAGGCTGCTaGAGAGAACGAATATCAGGAAGTGGGACTGCTGGA +
Preference number: 6 (lower is better)
Translates to: TLGTEESCILGC*RERISGSGTAG
Trigger: TCCAGCAGTCCCACTTCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACAGCTTTCTTCTGTCCCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 72 bp CTATTACCAAAGACATCTTCGTTTTCCATTCGCTTCTaGGCGCGCTCTGCACTATCTTGGTTTATGAAGCGG +
Preference number: 6 (lower is better)
Translates to: LLPKTSSFSIRF*ARSALSWFMKR
Trigger: CCGCTTCATAAACCAAGATAGTGCAGAGCGCGCTCAGAAGCGAATGGAAAACGAAGATGTCTTTGGTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396368.8
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp CAAGAAAGATATTCACGTGGTCAGATCTTTACATTCTaGGGCATGAGTCTGCTGCAACGAAGACCTCACACA +
Preference number: 6 (lower is better)
Translates to: QERYSRGQIFTF*GMSLLQRRPHT
Trigger: TGTGTGAGGTCTTCGTTGCAGCAGACTCATGCCCCAGAATGTAAAGATCTGACCACGTGAATATCTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS TCA 72 bp TCTGATCAGCTCGTTAGCATGATGCAGCAGTGCTTCTaGGGCCTGGTTTTTATGGACCAAAATAATGTGGAA +
Preference number: 6 (lower is better)
Translates to: SDQLVSMMQQCF*GLVFMDQNNVE
Trigger: TTCCACATTATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCATGCTAACGAGCTGATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp GAAATGAACTCTTCAAATCTGATCAGCTCGTTAGCATaGTGCAGCAGTGCTTCTGAGGCCTGGTTTTTATGG +
Preference number: 6 (lower is better)
Translates to: EMNSSNLISSLA*CSSASEAWFLW
Trigger: CCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCATGCTAACGAGCTGATCAGATTTGAAGAGTTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp AAGGGTAGCAAAGTCTCACTTGAACACCAATGTGACTaGGGCCAAGCTTCAGGTTTCCCACATTATTGCAAA +
Preference number: 6 (lower is better)
Translates to: KGSKVSLEHQCD*GQASGFPHYCK
Trigger: TTTGCAATAATGTGGGAAACCTGAAGCTTGGCCTCAGTCACATTGGTGTTCAAGTGAGACTTTGCTACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS GCA 72 bp CATCATTATCTTGTTGAAGCCATCCACGTGTTCTACTaGAGGAGTTCTCAGTTCCGTTTCCTTCCATCATAC +
Preference number: 6 (lower is better)
Translates to: HHYLVEAIHVFY*RSSQFRFLPSY
Trigger: GTATGATGGAAGGAAACGGAACTGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633837.1
CDS GCA 72 bp ATGTACTCTTTCGTTTGGGGACTATGTGGCAGCGTCTaGTCAGGACGAGAAAAGCAATTAGAGAATTTCCAA +
Preference number: 6 (lower is better)
Translates to: MYSFVWGLCGSV*SGREKQLENFQ
Trigger: TTGGAAATTCTCTAATTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAGTCCCCAAACGAAAGAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS CAA 72 bp GAATTTCCAAAGCCATGGCTTAGCATCATTATCTTGTaGAAGCCATCCACGTGTTCTACTGCAGGAGTTCTC +
Preference number: 6 (lower is better)
Translates to: EFPKPWLSIIIL*KPSTCSTAGVL
Trigger: GAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS CAA 90 bp GCAATTAGAGAATTTCCAAAGCCATGGCTTAGCATCATTATCTTGTaGAAGCCATCCACGTGTTCTACTGCAGGAGTTCTCAGTTCCGTT +
Preference number: 6 (lower is better)
Translates to: AIREFPKPWLSIIIL*KPSTCSTAGVLSSV
Trigger: AACGGAACTGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTCTCTAATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 72 bp AATTTCCAAAGCCATGGCTTAGCATCATTATCTTGTTaGAGCCATCCACGTGTTCTACTGCAGGAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: NFQSHGLASLSC*SHPRVLLQEFS
Trigger: TGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 72 bp GATATTCACGTGGTCAGATCTTTACATTCTGGGGCATaGGTCTGCTGCAACGAAGACCTCACACATATTTTA +
Preference number: 6 (lower is better)
Translates to: DIHVVRSLHSGA*VCCNEDLTHIL
Trigger: TAAAATATGTGTGAGGTCTTCGTTGCAGCAGACTCATGCCCCAGAATGTAAAGATCTGACCACGTGAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS CCA 72 bp AAGAGGTGCAGGTTGAGTATTTGGAGGTGGTATATTTaGCCAGACTTTAGCCGCATCGATTATGCTATTTCT +
Preference number: 6 (lower is better)
Translates to: KRCRLSIWRWYI*PDFSRIDYAIS
Trigger: AGAAATAGCATAATCGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS CCA 72 bp ACACAGGTAATGAAGTGTTCTAAGGGAACACCTCCTTaGTTTTCTTGCACTACTTCTAGATCGCCAAACTCT +
Preference number: 6 (lower is better)
Translates to: TQVMKCSKGTPP*FSCTTSRSPNS
Trigger: AGAGTTTGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGGTGTTCCCTTAGAACACTTCATTACCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000551742.5
ENST00000552535.1
ENST00000621511.2
ENST00000631398.1
ENST00000632465.1
ENST00000632628.1
ENST00000634121.1
CDS CAA 72 bp AGAGAATTTCCAAAGCCATGGCTTAGCATCATTATCTaGTTGAAGCCATCCACGTGTTCTACTGCAGGAGTT +
Preference number: 6 (lower is better)
Translates to: REFPKPWLSIII*LKPSTCSTAGV
Trigger: AACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS CAA 72 bp GGTGATGGTACATCCTTTAGTTCCACAGCAACTTTCTaGTTCTCCATGTACTCTTTCGTTTGGGGACTATGT +
Preference number: 6 (lower is better)
Translates to: GDGTSFSSTATF*FSMYSFVWGLC
Trigger: ACATAGTCCCCAAACGAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGAACTAAAGGATGTACCATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS CAA 90 bp AAAGCAATTAGAGAATTTCCAAAGCCATGGCTTAGCATCATTATCTaGTTGAAGCCATCCACGTGTTCTACTGCAGGAGTTCTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: KAIREFPKPWLSIII*LKPSTCSTAGVLSS
Trigger: GGAACTGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTCTCTAATTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS GCA 72 bp GCTTCAGGTTTCCCACATTATTGCAAAAAGACAACATaGAGTTATCTACCTTACATGAATGGGCCCATGTGT +
Preference number: 6 (lower is better)
Translates to: ASGFPHYCKKTT*SYLPYMNGPMC
Trigger: ACACATGGGCCCATTCATGTAAGGTAGATAACTGCATGTTGTCTTTTTGCAATAATGTGGGAAACCTGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1
CDS CCA 72 bp AGGACGAGAAAAGCAATTAGAGAATTTCCAAAGCCATaGCTTAGCATCATTATCTTGTTGAAGCCATCCACG +
Preference number: 6 (lower is better)
Translates to: RTRKAIREFPKP*LSIIILLKPST
Trigger: CGTGGATGGCTTCAACAAGATAATGATGCTAAGCCATGGCTTTGGAAATTCTCTAATTGCTTTTCTCGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000548025.5
ENST00000548216.2
ENST00000549219.1
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000632010.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
ENST00000633837.1
CDS TCA 72 bp TCCTTATTGGAACAATGCTGTCTGCAGACAGGCTCGTaGTATTCTAACTCTTCAAATATAATTGGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: SLLEQCCLQTGS*YSNSSNIIGLQ
Trigger: TTGCAGCCCAATTATATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAGACAGCATTGTTCCAATAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396368.8
ENST00000540441.6
ENST00000546864.2
ENST00000548025.5
ENST00000551742.5
ENST00000552553.5
ENST00000621511.2
ENST00000631398.1
ENST00000631733.1
ENST00000632465.1
ENST00000632628.1
ENST00000633811.1
CDS TCA 72 bp AAAGAATTACTTCTAAAGGAAAACGAACGGCACACCTaGAATCCTTATTGGAACAATGCTGTCTGCAGACAG +
Preference number: 6 (lower is better)
Translates to: KELLLKENERHT*NPYWNNAVCRQ
Trigger: CTGTCTGCAGACAGCATTGTTCCAATAAGGATTTCAGGTGTGCCGTTCGTTTTCCTTTAGAAGTAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552535.1
ENST00000634121.1
CDS CAA 72 bp CCCAAGTGCCTGTCAAGTTTAAGCTGTATTCCAGCTTaGATTAATGACTTAGACAAGAGTCAAATGGCTTGT +
Preference number: 6 (lower is better)
Translates to: PKCLSSLSCIPA*INDLDKSQMAC
Trigger: ACAAGCCATTTGACTCTTGTCTAAGTCATTAATCAAAGCTGGAATACAGCTTAAACTTGACAGGCACTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551678.1
ENST00000632094.1
CDS TCA 72 bp TCAGTTCATAAATTCATTTCCAGAAGTGACTTGACATaGTCAAGAAAGATATTCACGTGGTCAGATCTTTAC +
Preference number: 6 (lower is better)
Translates to: SVHKFISRSDLT*SRKIFTWSDLY
Trigger: GTAAAGATCTGACCACGTGAATATCTTTCTTGATCATGTCAAGTCACTTCTGGAAATGAATTTATGAACTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548216.2
ENST00000632010.1