RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARCHF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000165406

Ensembl transcript IDs: ENST00000319836.7, ENST00000395769.6, ENST00000395771.7, ENST00000451376.1, ENST00000453424.7, ENST00000453980.3, ENST00000476962.1, ENST00000602712.2, ENST00000612386.1, ENST00000613420.1, ENST00000616143.4

Found 747 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTaGCAGTTTGCTCACACCTGGCCCTCGTCCCAGAGCCAGCCCACC +
Preference number: 1 (lower is better)
Translates to: QLGGHVAGEQWHSGP*QFAHTWPSSQSQPT
Trigger: GGTGGGCTGGCTCTGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp GTCTGGTTAAGGCGACAGCTGGGCGGGCATGTGGCCGGGGAGCAGTaGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCC +
Preference number: 1 (lower is better)
Translates to: VWLRRQLGGHVAGEQ*HSGPWQFAHTWPSS
Trigger: GGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTGTCGCCTTAACCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp CTGAGAGTGGGGCCAAGGGCCCTGAAGGATCCTGTCTGTTCAGTCTaGTTAAGGCGACAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGG +
Preference number: 1 (lower is better)
Translates to: LRVGPRALKDPVCSV*LRRQLGGHVAGEQW
Trigger: CCACTGCTCCCCGGCCACATGCCCGCCCAGCTGTCGCCTTAACCAGACTGAACAGACAGGATCCTTCAGGGCCCTTGGCCCCACTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp AGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTaGCCCAGCTGCCTGAGGCCTGCATGCCTGTGGCCAGGTAGGACA +
Preference number: 1 (lower is better)
Translates to: RGSPRSCRHHPRLPN*PSCLRPACLWPGRT
Trigger: TGTCCTACCTGGCCACAGGCATGCAGGCCTCAGGCAGCTGGGCCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp AGCCTCACAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTaGATGCAGTGCACACACCCCGGCCAGGGTGGCACATGGCTGCTC +
Preference number: 1 (lower is better)
Translates to: SLTVGQHPSCMQGRT*MQCTHPGQGGTWLL
Trigger: GAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp CTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCTTGCATaGAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: LPRAEASQWASTHLA*KGEPACSAHTPARV
Trigger: CACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp CCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCCCAGCTaGCTGAGGCCTGCATGCCTGTGGCCAGGTAGGACACATGTGCAG +
Preference number: 1 (lower is better)
Translates to: PRSCRHHPRLPNWPS*LRPACLWPGRTHVQ
Trigger: CTGCACATGTGTCCTACCTGGCCACAGGCATGCAGGCCTCAGGCAGCTGGGCCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp CACAGGCACGGGCTGGATGTGCCCTGGGAGACAGAAAGGAGAGGCTaGCCTATTCTCAGGAGCTGGCTATGGCTGGACAGTGCCTGCCCG +
Preference number: 1 (lower is better)
Translates to: HRHGLDVPWETERRG*PILRSWLWLDSACP
Trigger: CGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGGTCAGCCTCTCCTTTCTGTCTCCCAGGGCACATCCAGCCCGTGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp AGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTTCTCCAACCCTaGAGCCCACAGCAGGGGTGCAGAGGCAGCCCCAGATCGTGCAGA +
Preference number: 1 (lower is better)
Translates to: RLVDLTRLVPALLQP*SPQQGCRGSPRSCR
Trigger: TCTGCACGATCTGGGGCTGCCTCTGCACCCCTGCTGTGGGCTTCAGGGTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp ATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTaGGGACCACTGCAAGCTGGAGGCGGCTGGGTATCAGGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: IFSSWLDTPQCSAPG*GPLQAGGGWVSGPG
Trigger: CCCAGGCCCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR TCA 90 bp GATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCCCAGCTGCCTaGGGCCTGCATGCCTGTGGCCAGGTAGGACACATGTGCAGGTTT +
Preference number: 1 (lower is better)
Translates to: DRADITRGSQTGPAA*GLHACGQVGHMCRF
Trigger: AAACCTGCACATGTGTCCTACCTGGCCACAGGCATGCAGGCCTCAGGCAGCTGGGCCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp CGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGACCACTGCAAGCTGGAGGCGGCTGG +
Preference number: 1 (lower is better)
Translates to: RDAEGIFSSWLDTPQ*SAPGWGPLQAGGGW
Trigger: CCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR GCA 90 bp TCACAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATaGAGTGCACACACCCCGGCCAGGGTGGCACATGGCTGCTCTTTC +
Preference number: 1 (lower is better)
Translates to: SQWASTHLACKGEPA*SAHTPARVAHGCSF
Trigger: GAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp AGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCTTaGATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAG +
Preference number: 1 (lower is better)
Translates to: RTSPSRSLTVGQHPS*MQGRTCMQCTHPGQ
Trigger: CTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp GGCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTaGCATAGTGGGGTGCCAGCTACATTGGGTGGGATGCCCAGGGGC +
Preference number: 1 (lower is better)
Translates to: GWAWEGYRAQLSRHL*HSGVPATLGGMPRG
Trigger: GCCCCTGGGCATCCCACCCAATGTAGCTGGCACCCCACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp TGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTaGTCCAGGCTGGGGACCACTGCAAGCTGGAGGCGGCTGGGTATC +
Preference number: 1 (lower is better)
Translates to: CRGNLLVMARHSPML*SRLGTTASWRRLGI
Trigger: GATACCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR GCA 90 bp GTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTaGACACACCCCGGCCAGGGTGGCACATGGCTGCTCTTTCAATGT +
Preference number: 1 (lower is better)
Translates to: VGQHPSCMQGRTCMQ*THPGQGGTWLLFQC
Trigger: ACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp ACCCCCAGCATCTCCCATCTCCTCCGTGCAGGCTGGGTGAGAGAATaGCCTGGAAAGGAAGCATCTGCGCTACATTGTGCTTCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: TPSISHLLRAGWVRE*PGKEASALHCASGP
Trigger: GGGGCCTGAAGCACAATGTAGCGCAGATGCTTCCTTTCCAGGCCATTCTCTCACCCAGCCTGCACGGAGGAGATGGGAGATGCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp AGACAGAAAGGAGAGGCTGACCTATTCTCAGGAGCTGGCTATGGCTaGACAGTGCCTGCCCGGCCAGAGGAAGGCCACAGCAGAGCCACT +
Preference number: 1 (lower is better)
Translates to: RQKGEADLFSGAGYG*TVPARPEEGHSRAT
Trigger: AGTGGCTCTGCTGTGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGGTCAGCCTCTCCTTTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp CAAGACCATGGGCAGGAACTCTGCTGGCTCCCCATGATGTCATCATaGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGAC +
Preference number: 1 (lower is better)
Translates to: QDHGQELCWLPMMSS*GLPLSHRAARQRQD
Trigger: GTCCTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR CCA 90 bp TATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTaGTCCCAGCCCTTCTCCAACCCTGAAGCCCACAGCAGGGGTGCA +
Preference number: 1 (lower is better)
Translates to: YLPSATSRDLWISPG*SQPFSNPEAHSRGA
Trigger: TGCACCCCTGCTGTGGGCTTCAGGGTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp CTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGC +
Preference number: 1 (lower is better)
Translates to: LIQLKTMGRNSAGSP*CHHGVFHFPTELPG
Trigger: GCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR GCA 90 bp TGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATaGTTCACTGCTAGATGCAGGGGGCTAGAAGGGTCTGATGAATCA +
Preference number: 1 (lower is better)
Translates to: WWPHQMGVPHPHQAS*FTARCRGLEGSDES
Trigger: TGATTCATCAGACCCTTCTAGCCCCCTGCATCTAGCAGTGAAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp GGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGTGGCACATaGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTA +
Preference number: 1 (lower is better)
Translates to: GRTCMQCTHPGQGGT*LLFQCEANTNWRDL
Trigger: TAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp GAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGCAGAGCTGGTaGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGC +
Preference number: 1 (lower is better)
Translates to: ERASFPRLQEHWQSW*PHQMGVPHPHQASC
Trigger: GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp ACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGCAGAGCTaGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCA +
Preference number: 1 (lower is better)
Translates to: TERASFPRLQEHWQS*WPHQMGVPHPHQAS
Trigger: TGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp GCCTCTTCCCCTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTaGGACCTCATTCTGGGTTTCTATATGGGTCAACCAAATGCCATC +
Preference number: 1 (lower is better)
Translates to: ASSPSLAYKYQASWP*DLILGFYMGQPNAI
Trigger: GATGGCATTTGGTTGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAGGGGAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp TTCCAAGGCTACAGGAACATTGGCAGAGCTGGTGGCCACACCAGATaGGAGTACCACATCCCCACCAGGCTTCATGCTTCACTGCTAGAT +
Preference number: 1 (lower is better)
Translates to: FQGYRNIGRAGGHTR*EYHIPTRLHASLLD
Trigger: ATCTAGCAGTGAAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTCCTGTAGCCTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp AAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATaGACGAAACGCCTAAGGCCCAAAAAGACTGAGGGCAGGACCCCC +
Preference number: 1 (lower is better)
Translates to: KAKESPRVCFIPLAG*TKRLRPKKTEGRTP
Trigger: GGGGGTCCTGCCCTCAGTCTTTTTGGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp CACAAAGACCAAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTaGCTTATGGGGAGTAGAGGCCAAATCAGAGAGGGCTGGCTGGTG +
Preference number: 1 (lower is better)
Translates to: HKDQIAEARSLLMVL*LMGSRGQIREGWLV
Trigger: CACCAGCCAGCCCTCTCTGATTTGGCCTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp AGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACTTGTaGATCTCACCCGGTTGGTCCCAGCCCTTCTCCAACCCTGAAGCC +
Preference number: 1 (lower is better)
Translates to: STSIVYLPSATSRDL*ISPGWSQPFSNPEA
Trigger: GGCTTCAGGGTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp CCTTCAGCCTCCTGGCCTTCAAAACAAACTCCAGGGCTTCCACTCTaGAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCA +
Preference number: 1 (lower is better)
Translates to: PSASWPSKQTPGLPL*KAKESPRVCFIPLA
Trigger: TGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTTCAGAGTGGAAGCCCTGGAGTTTGTTTTGAAGGCCAGGAGGCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 90 bp AACTTGGGCACAAAGACCAAATTGCTGAGGCCAGAAGCCTGCTTATaGTACTGTGACTTATGGGGAGTAGAGGCCAAATCAGAGAGGGCT +
Preference number: 1 (lower is better)
Translates to: NLGTKTKLLRPEACL*YCDLWGVEAKSERA
Trigger: AGCCCTCTCTGATTTGGCCTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp GTGCACACACCCCGGCCAGGGTGGCACATGGCTGCTCTTTCAATGTaGAGCCAACACCAACTGGAGAGATTTAACTATAAAGGAATATTT +
Preference number: 1 (lower is better)
Translates to: VHTPRPGWHMAALSM*SQHQLERFNYKGIF
Trigger: AAATATTCCTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp ACAATAAACTTGGGCACAAAGACCAAATTGCTGAGGCCAGAAGCCTaGTTATGGTACTGTGACTTATGGGGAGTAGAGGCCAAATCAGAG +
Preference number: 1 (lower is better)
Translates to: TINLGTKTKLLRPEA*LWYCDLWGVEAKSE
Trigger: CTCTGATTTGGCCTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCCCAAGTTTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 90 bp GTGAAGTGGGGATTCACACTTAGAAAATCTATCCTGGTCTTCACCTaGAACACTCATCTACTGCTGGGTGGCAGGAACAAGTATACAAAA +
Preference number: 1 (lower is better)
Translates to: VKWGFTLRKSILVFT*NTHLLLGGRNKYTK
Trigger: TTTTGTATACTTGTTCCTGCCACCCAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGGATAGATTTTCTAAGTGTGAATCCCCACTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 90 bp AAAAGGGAAAGCACTTCAAAACAGAAAGTACTTCAATTGTGTATTTaGCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGT +
Preference number: 1 (lower is better)
Translates to: KRESTSKQKVLQLCI*LQPHPETCGSHPVG
Trigger: ACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAAGTGCTTTCCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGAAGCTGGGCGGGCATGTaGCCGGGGAGCAGTGGCACA +
Preference number: 2 (lower is better)
Translates to: PGALPGQFLRDIGRADLGSWAGM*PGSSGT
Trigger: TGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCT...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCAGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 2 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCCAGGCTGGGGACCACTaGAAGCTGGAGGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIQAGDH*KLEAAG
Trigger: CCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTG...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGATGGGGCCAAGGGCCCTaGAGGATCCTGTCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: PGALPGQFLRDIGRADLGWGQGP*RILSVQ
Trigger: CTGAACAGACAGGATCCTTCAGGGCCCTTGGCCCCA...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCTCCCATCTCCTCCGTaGAGGCTGGGTGAGAGAATG +
Preference number: 2 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWLPSPP*RLGERM
Trigger: CATTCTCTCACCCAGCCTGCACGGAGGAGATGGGAG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTCAAGCTGGAGGCGGCTaGGTATCAGGGCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLQAGGG*VSGPGH
Trigger: GTGCCCAGGCCCTGATACCCAGCCGCCTCCAGCTTG...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 2 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCGTGGCCGGGGAGCAGTaGCACAGCGGACCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSVAGEQ*HSGPWQ
Trigger: CTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCAC...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp CAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCTaGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCA +
Preference number: 2 (lower is better)
Translates to: QNFPEQKPHSGPAPI*HARENLHAVHTPRP
Trigger: TGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCATGGGCAGGAACTCTaGTGGCTCCCCATGATGTCA +
Preference number: 2 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWHGQEL*WLPMMS
Trigger: TGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGCACCATGGCTCCACCTaGTCAAGAGCATGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: PILHARENLHAVHTPRPGHHGST*SRAWRR
Trigger: CCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTG...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCAGAACCTGCATGCAGTaGACACACCCCGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIRTCMQ*THPGQG
Trigger: ACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCT...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCATTGGCAGAGCTGGTaGCCACACCAGATGGGAGTA +
Preference number: 2 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWHWQSW*PHQMGV
Trigger: TACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGCATGGGCAGGAACTCTaGTGGCTCCCCATGATGTCA +
Preference number: 2 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGHGQEL*WLPMMS
Trigger: TGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATG...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGCAGGCTGGGGACCACTaGAAGCTGGAGGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQQAGDH*KLEAAG
Trigger: CCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTG...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCTGGCTGGACAGTGCCTaGCCGGCCAGAGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSWLDSA*PARGRP
Trigger: TGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCA...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTCTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 2 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTGGCAGGGCTGACCTaGGATTCAGCTCCCCTGAGT +
Preference number: 2 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCLAGLT*DSAPLS
Trigger: ACTCAGGGGAGCTGAATCCCAGGTCAGCCCTGCCAA...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTGGCCAGCACCCATCTTaGATGCAAGGGAGAACCTGC +
Preference number: 2 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPGQHPS*MQGRTC
Trigger: GCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCC...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGCAAGCTGGAGGCGGCTaGGTATCAGGGCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQQAGGG*VSGPGH
Trigger: GTGCCCAGGCCCTGATACCCAGCCGCCTCCAGCTTG...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGC +
Preference number: 2 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWGIFSS*LDTPQC
Trigger: GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCC...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTGGTGGCCACACCAGATaGGAGTACCACATCCCCACC +
Preference number: 2 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVGGHTR*EYHIPT
Trigger: GGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACC...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTAGGCCTGCATGCCTGTaGCCAGGTAGGACACATGTG +
Preference number: 2 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPRPACL*PGRTHV
Trigger: CACATGTGTCCTACCTGGCCACAGGCATGCAGGCCT...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVSWGSP*CRGNLL
Trigger: GAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGA...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPLDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCTACATTGGGTGGGATaGCCAGGGGCTGTCCCTACC +
Preference number: 2 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSLHWVG*PGAVPT
Trigger: GGTAGGGACAGCCCCTGGGCATCCCACCCAATGTAG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCAGTCTGTGGTTGCCTaGGGTCCCCAGGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSQSVVA*GPQAEK
Trigger: CTTCTCAGCCTGGGGACCCCAGGCAACCACAGACTG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGCAGTCTGTGGTTGCCTaGGGTCCCCAGGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVQSVVA*GPQAEK
Trigger: CTTCTCAGCCTGGGGACCCCAGGCAACCACAGACTG...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp CATCTACTGCTGGGTGGCAGGAACAAGTATACAAAACCAGGGGCCTaGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGA +
Preference number: 2 (lower is better)
Translates to: HLLLGGRNKYTKPGA*PGQFLRDIGRADLG
Trigger: TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGGTTTTGTATACTTGTTCCTGCCACCCAGCAGTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTTTTGCCATAGTGGGGTaGCAGCTACATTGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLFAIVG*QLHWVG
Trigger: TCCCACCCAATGTAGCTGGCACCCCACTATGGCAAA...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGGGGCAGGAACTCTGCTaGCTCCCCATGATGTCATCA +
Preference number: 2 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPGQELC*LPMMSS
Trigger: TGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCC...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTTTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 2 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGTGGCACAGCGGACCCTaGCAGTTTGCTCACACCTGG +
Preference number: 2 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQWHSGP*QFAHTW
Trigger: CCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCA...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGTGGCCGGGGAGCAGTaGCACAGCGGACCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEVAGEQ*HSGPWQ
Trigger: CTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCAC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGAGCTGGGCGGGCATGTaGCCGGGGAGCAGTGGCACA +
Preference number: 2 (lower is better)
Translates to: HSTQKNRESKFSKATGTLSWAGM*PGSSGT
Trigger: TGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCT...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTCTTCCCATGAGAATCTaGCTGGGCATGGGAGGGATA +
Preference number: 2 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLLPMRI*LGMGGI
Trigger: TATCCCTCCCATGCCCAGCCAGATTCTCATGGGAAG...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp GCTCAGTTATCAAGGCACCTTTGCCATAGTGGGGTGCCAGCTACATaGGGTGGGATGCCCAGGGGCTGTCCCTACCTAAGCACTTTCTTG +
Preference number: 2 (lower is better)
Translates to: AQLSRHLCHSGVPAT*GGMPRGCPYLSTFL
Trigger: CAAGAAAGTGCTTAGGTAGGGACAGCCCCTGGGCATCCCACCCAATGTAGCTGGCACCCCACTATGGCAAAGGTGCCTTGATAACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGATCCCCTTAGCAGGATaGACGAAACGCCTAAGGCCC +
Preference number: 2 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVIPLAG*TKRLRP
Trigger: GGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGAT...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCATGGGCAGGAACTCTaGTGGCTCCCCATGATGTCA +
Preference number: 2 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCHGQEL*WLPMMS
Trigger: TGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCCCTGATGACAGAATaGACTGAGAGTGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVSLMTE*TESGAK
Trigger: CTTGGCCCCACTCTCAGTGCATTCTGTCATCAGGGA...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTAGGGGTATGGGTAATTaGACTTCGGGGCACAGTGAA +
Preference number: 2 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPRGMGN*TSGHSE
Trigger: TTCACTGTGCCCCGAAGTGCAATTACCCATACCCCT...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCATGCTCTGCTCCAGGCTaGGGACCACTGCAAGCTGGA +
Preference number: 2 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSCSAPG*GPLQAG
Trigger: TCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCA...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCACTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSLDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSLDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTGAATCACCTCGTGTTTaGTTCATCCCCTTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLESPRV*FIPLAG
Trigger: TCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTC...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTCTGAGGCCAGAAGCCTaGTTATGGTACTGTGACTTA +
Preference number: 2 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPLRPEA*LWYCDL
Trigger: TAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAG...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGC +
Preference number: 2 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPGIFSS*LDTPQC
Trigger: GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCC...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTGCAGGAGTCTGTGTTTaGGGGTCTGTTTCAATACCA +
Preference number: 2 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPAGVCV*GSVSIP
Trigger: TGGTATTGAAACAGACCCCCAAACACAGACTCCTGC...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCAAGGAATCAGACACTaGCTTGGAGGAGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSQGIRH*LGGDRR
Trigger: CCTCCTGTCTCCTCCAAGCCAGTGTCTGATTCCTTG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGTTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTCTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 2 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGGGCCAGGGTGGCACATaGCTGCTCTTTCAATGTGAA +
Preference number: 2 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQGQGGT*LLFQCE
Trigger: TTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCC...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGGGTGGCCACACCAGATaGGAGTACCACATCCCCACC +
Preference number: 2 (lower is better)
Translates to: KLLRPEACLWYCDLWGVEGGHTR*EYHIPT
Trigger: GGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACC...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGTCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: TAPKRTERASFPRLQEHWSWGSP*CRGNLL
Trigger: GAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGA...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAATGGGGCCAAGGGCCCTaGAGGATCCTGTCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEWGQGP*RILSVQ
Trigger: CTGAACAGACAGGATCCTTCAGGGCCCTTGGCCCCA...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAAGAACCTGCATGCAGTaGACACACCCCGGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: KGKGITSCLLHPLSRMNERTCMQ*THPGQG
Trigger: ACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCT...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGCCCATGATGTCATCATaGGGTCTTCCACTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQPMMSS*GLPLSH
Trigger: GTGGGAAAGTGGAAGACCCCATGATGACATCATGGG...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGGATCCTTCAGCCTCCTaGCCTTCAAAACAAACTCCA +
Preference number: 2 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVDPSAS*PSKQTP
Trigger: TGGAGTTTGTTTTGAAGGCCAGGAGGCTGAAGGATC...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp AACTCCAGGGCTTCCACTCTGAAAGGCAAAGGAATCACCTCGTGTTaGCTTCATCCCCTTAGCAGGATGAACGAAACGCCTAAGGCCCAA +
Preference number: 2 (lower is better)
Translates to: NSRASTLKGKGITSC*LHPLSRMNETPKAQ
Trigger: TTGGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTTCAGAGTGGAAGCCCTGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCATTGCTCAGTGAATCATaGGCCACCACAGAGCACCAT +
Preference number: 2 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSLLSES*ATTEHH
Trigger: ATGGTGCTCTGTGGTGGCGCATGATTCACTGAGCAA...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: IGILFSHSAQDHGQELCWGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGCCTATTCTCAGGAGCTaGCTATGGCTGGACAGTGCC +
Preference number: 2 (lower is better)
Translates to: TAPKRTERASFPRLQEHWPILRS*LWLDSA
Trigger: GGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGG...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp GAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACTaGTGGATCTCACCCGGTTGGTCCCAGCCCTTCTCCAACCCTGAA +
Preference number: 2 (lower is better)
Translates to: ESTSIVYLPSATSRD*WISPGWSQPFSNPE
Trigger: TTCAGGGTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGCTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 2 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGCTGCTCTTTCAATGTaGAGCCAACACCAACTGGAG +
Preference number: 2 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEAALSM*SQHQLE
Trigger: CTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGATCCTGGTCTTCACCTaGAACACTCATCTACTGCTG +
Preference number: 2 (lower is better)
Translates to: KLLRPEACLWYCDLWGVEILVFT*NTHLLL
Trigger: CAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGGAT...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAAAAAAGCCTCTGGCCTaGTTGTCCTGTCTTAAAAGT +
Preference number: 2 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSKKPLA*LSCLKS
Trigger: ACTTTTAAGACAGGACAAGCAGGCCAGAGGCTTTTT...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGGAGTGTCAATCCCGCTaGACACACATATTACAAAAT +
Preference number: 2 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQECQSR*THILQN
Trigger: ATTTTGTAATATGTGTGTCCAGCGGGATTGACACTC...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGAATCAGACACTGGCTTaGAGGAGACAGGAGGACAAA +
Preference number: 2 (lower is better)
Translates to: HSTQKNRESKFSKATGTLNQTLA*RRQEDK
Trigger: TTTGTCCTCCTGTCTCCTCCAAGCCAGTGTCTGATT...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGCAGAAGCCTCACAGTaGGCCAGCACCCATCTTGCA +
Preference number: 2 (lower is better)
Translates to: FKTESTSIVYLPSATSRDAEASQ*ASTHLA
Trigger: TGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGAAGCCAACACCAACTaGAGAGATTTAACTATAAAG +
Preference number: 2 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSEANTN*RDLTIK
Trigger: CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACCCTCTTCCCCTTCCCTaGCCTACAAATACCAGGCCT +
Preference number: 2 (lower is better)
Translates to: FKTESTSIVYLPSATSRDPLPLP*PTNTRP
Trigger: AGGCCTGGTATTTGTAGGCCAGGGAAGGGGAAGAGG...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp CAAAAGGGAAAGCACTTCAAAACAGAAAGTACTTCAATTGTGTATTaGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGG +
Preference number: 2 (lower is better)
Translates to: QKGKHFKTESTSIVY*PSATSRDLWISPGW
Trigger: CCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAAGTGCTTTCCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR TCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGTGCTGTTTGCTCAGTaGATCATGCGCCACCACAGA +
Preference number: 2 (lower is better)
Translates to: FKTESTSIVYLPSATSRDVLFAQ*IMRHHR
Trigger: TCTGTGGTGGCGCATGATTCACTGAGCAAACAGCAC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGGGGCAGGAACTCTGCTaGCTCCCCATGATGTCATCA +
Preference number: 2 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQGQELC*LPMMSS
Trigger: TGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCC...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGTTAGAAAATCTATCCTaGTCTTCACCTGAAACACTC +
Preference number: 2 (lower is better)
Translates to: TAPKRTERASFPRLQEHWLENLS*SSPETL
Trigger: GAGTGTTTCAGGTGAAGACCAGGATAGATTTTCTAA...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 90 bp ACCAGATTCAAAAGGGAAAGCACTTCAAAACAGAAAGTACTTCAATaGTGTATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCAC +
Preference number: 2 (lower is better)
Translates to: TRFKRESTSKQKVLQ*CICLQPHPETCGSH
Trigger: GTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAAGTGCTTTCCCTTTTGAATCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACTTCTGGGTTTCTATATaGGTCAACCAAATGCCATCC +
Preference number: 2 (lower is better)
Translates to: FKTESTSIVYLPSATSRDFWVSI*VNQMPS
Trigger: GGATGGCATTTGGTTGACCCATATAGAAACCCAGAA...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp GGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTaGTCACACCTGGCCCTCGTCCCAGAGCCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: GRGAVAQRTLAV*SHLALVPEPAH
Trigger: GTGGGCTGGCTCTGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp GGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTaGCAGTTTGCTCACACCTGGCCCTCGTCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: GHVAGEQWHSGP*QFAHTWPSSQS
Trigger: GCTCTGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp AGGCGACAGCTGGGCGGGCATGTGGCCGGGGAGCAGTaGCACAGCGGACCCTGGCAGTTTGCTCACACCTGG +
Preference number: 3 (lower is better)
Translates to: RRQLGGHVAGEQ*HSGPWQFAHTW
Trigger: CCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTGTCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp AGCCCACAGCAGGGGTGCAGAGGCAGCCCCAGATCGTaGAGACATCACCCGAGGCTCCCAAACTGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: SPQQGCRGSPRS*RHHPRLPNWPS
Trigger: GCTGGGCCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCCCTGCTGTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp GGGCCAAGGGCCCTGAAGGATCCTGTCTGTTCAGTCTaGTTAAGGCGACAGCTGGGCGGGCATGTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: GPRALKDPVCSV*LRRQLGGHVAG
Trigger: CCCGGCCACATGCCCGCCCAGCTGTCGCCTTAACCAGACTGAACAGACAGGATCCTTCAGGGCCCTTGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp CCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTaGCCCAGCTGCCTGAGGCCTGCATGCCTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: PRSCRHHPRLPN*PSCLRPACLWP
Trigger: TGGCCACAGGCATGCAGGCCTCAGGCAGCTGGGCCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp GCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATaGAGTGCACACACCCCGGCCAGGGTGGCACATGGC +
Preference number: 3 (lower is better)
Translates to: ASTHLACKGEPA*SAHTPARVAHG
Trigger: GCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp GTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTaGATGCAGTGCACACACCCCGGCCAGGGTGGCACA +
Preference number: 3 (lower is better)
Translates to: VGQHPSCMQGRT*MQCTHPGQGGT
Trigger: TGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp CCTATTCTCAGGAGCTGGCTATGGCTGGACAGTGCCTaGCCGGCCAGAGGAAGGCCACAGCAGAGCCACTCC +
Preference number: 3 (lower is better)
Translates to: PILRSWLWLDSA*PARGRPQQSHS
Trigger: GGAGTGGCTCTGCTGTGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp GGAGAGGCTGACCTATTCTCAGGAGCTGGCTATGGCTaGACAGTGCCTGCCCGGCCAGAGGAAGGCCACAGC +
Preference number: 3 (lower is better)
Translates to: GEADLFSGAGYG*TVPARPEEGHS
Trigger: GCTGTGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGGTCAGCCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCGCGGACCCTGGCAGTTaGCTCACACCTGGCCCTCGT +
Preference number: 3 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCADPGS*LTPGPR
Trigger: ACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGC...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp CACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTaGACACACCCCGGCCAGGGTGGCACATGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: HPSCMQGRTCMQ*THPGQGGTWLL
Trigger: GAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGGGCACAAAGACCAAATaGCTGAGGCCAGAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWGTKTK*LRPEAC
Trigger: GCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCC...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp GCAGAAGCCTCACAGTGGGCCAGCACCCATCTTGCATaGAAGGGAGAACCTGCATGCAGTGCACACACCCCG +
Preference number: 3 (lower is better)
Translates to: AEASQWASTHLA*KGEPACSAHTP
Trigger: CGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp TCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTaGGGACCACTGCAAGCTGGAGGCGGCTGGGTATCA +
Preference number: 3 (lower is better)
Translates to: SWLDTPQCSAPG*GPLQAGGGWVS
Trigger: TGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR GCA 72 bp CCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCTTaGATGCAAGGGAGAACCTGCATGCAGTGCACACAC +
Preference number: 3 (lower is better)
Translates to: PSRSLTVGQHPS*MQGRTCMQCTH
Trigger: GTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp GGGCTCAGTTATCAAGGCACCTTTGCCATAGTGGGGTaGCAGCTACATTGGGTGGGATGCCCAGGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: GLSYQGTFAIVG*QLHWVGCPGAV
Trigger: GACAGCCCCTGGGCATCCCACCCAATGTAGCTGGCACCCCACTATGGCAAAGGTGCCTTGATAACTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp GGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: GVRRDAEGIFSS*LDTPQCSAPGW
Trigger: CCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR CCA 72 bp TCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTaGTCCCAGCCCTTCTCCAACCCTGAAGCCCACAGC +
Preference number: 3 (lower is better)
Translates to: SATSRDLWISPG*SQPFSNPEAHS
Trigger: GCTGTGGGCTTCAGGGTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTCCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 3 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 72 bp GGGCTGGATGTGCCCTGGGAGACAGAAAGGAGAGGCTaGCCTATTCTCAGGAGCTGGCTATGGCTGGACAGT +
Preference number: 3 (lower is better)
Translates to: GLDVPWETERRG*PILRSWLWLDS
Trigger: ACTGTCCAGCCATAGCCAGCTCCTGAGAATAGGTCAGCCTCTCCTTTCTGTCTCCCAGGGCACATCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp GAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGACCACTGCAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: EGIFSSWLDTPQ*SAPGWGPLQAG
Trigger: TCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR GCA 72 bp TGCAGTGCACACACCCCGGCCAGGGTGGCACATGGCTaGTCTTTCAATGTGAAGCCAACACCAACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: CSAHTPARVAHG*SFNVKPTPTGE
Trigger: CTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp TGCATGCAGTGCACACACCCCGGCCAGGGTGGCACATaGCTGCTCTTTCAATGTGAAGCCAACACCAACTGG +
Preference number: 3 (lower is better)
Translates to: CMQCTHPGQGGT*LLFQCEANTNW
Trigger: CCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGTGTGCACTGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp CACCAGATGGGAGTACCACATCCCCACCAGGCTTCATaGTTCACTGCTAGATGCAGGGGGCTAGAAGGGTCT +
Preference number: 3 (lower is better)
Translates to: HQMGVPHPHQAS*FTARCRGLEGS
Trigger: AGACCCTTCTAGCCCCCTGCATCTAGCAGTGAAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp TACAGGAACATTGGCAGAGCTGGTGGCCACACCAGATaGGAGTACCACATCCCCACCAGGCTTCATGCTTCA +
Preference number: 3 (lower is better)
Translates to: YRNIGRAGGHTR*EYHIPTRLHAS
Trigger: TGAAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp GCAAGTTTTCCAAGGCTACAGGAACATTGGCAGAGCTaGTGGCCACACCAGATGGGAGTACCACATCCCCAC +
Preference number: 3 (lower is better)
Translates to: ASFPRLQEHWQS*WPHQMGVPHPH
Trigger: GTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTCCTGTAGCCTTGGAAAACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp CTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATaGGGAGTAGAGGCCAAATCAGAGAGGGCTGGCTGG +
Preference number: 3 (lower is better)
Translates to: LRPEACLWYCDL*GVEAKSERAGW
Trigger: CCAGCCAGCCCTCTCTGATTTGGCCTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTAAGCCTCTGGCCTGCTaGTCCTGTCTTAAAAGTCAT +
Preference number: 3 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPKPLAC*SCLKSH
Trigger: ATGACTTTTAAGACAGGACAAGCAGGCCAGAGGCTT...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 72 bp GGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTCGTCATGGCTAGACAC +
Preference number: 3 (lower is better)
Translates to: GVCFNTISWGSP*CRGNLLVMARH
Trigger: GTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR TCA 72 bp CCTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTaGGACCTCATTCTGGGTTTCTATATGGGTCAACCA +
Preference number: 3 (lower is better)
Translates to: PSLAYKYQASWP*DLILGFYMGQP
Trigger: TGGTTGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGATTCTCACAATAAACTaGGGCACAAAGACCAAATTG +
Preference number: 3 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWILTIN*GTKTKL
Trigger: CAATTTGGTCTTTGTGCCCAAGTTTATTGTGAGAAT...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp TCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTaGCTCCCCATGATGTCATCATGGGGTCTTCCACTT +
Preference number: 3 (lower is better)
Translates to: SHSAQDHGQELC*LPMMSSWGLPL
Trigger: AAGTGGAAGACCCCATGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR CCA 72 bp CCTGGTCTTCACCTGAAACACTCATCTACTGCTGGGTaGCAGGAACAAGTATACAAAACCAGGGGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: PGLHLKHSSTAG*QEQVYKTRGLA
Trigger: GGCAAGGCCCCTGGTTTTGTATACTTGTTCCTGCCACCCAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCCGGAGGTAACTATTaGCCTGGAAAACTAGGAAAC +
Preference number: 3 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSPGGNY*PGKLGN
Trigger: GTTTCCTAGTTTTCCAGGCAAATAGTTACCTCCGGG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACCCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 3 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR TCA 72 bp GAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATaGACGAAACGCCTAAGGCCCAAAAAGACTGAGGGC +
Preference number: 3 (lower is better)
Translates to: ESPRVCFIPLAG*TKRLRPKKTEG
Trigger: GCCCTCAGTCTTTTTGGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp TTGGGCACAAAGACCAAATTGCTGAGGCCAGAAGCCTaGTTATGGTACTGTGACTTATGGGGAGTAGAGGCC +
Preference number: 3 (lower is better)
Translates to: LGTKTKLLRPEA*LWYCDLWGVEA
Trigger: GGCCTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 3 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGGCAGGAGTCTGTGTTaGGGGGTCTGTTTCAATACC +
Preference number: 3 (lower is better)
Translates to: HSTQKNRESKFSKATGTLGRSLC*GVCFNT
Trigger: GGTATTGAAACAGACCCCCAAACACAGACTCCTGCC...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGGAGGGACAAGGCCATTaGATGGTAGTGATTTTGGTT +
Preference number: 3 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQEGQGH*MVVILV
Trigger: AACCAAAATCACTACCATCAAATGGCCTTGTCCCTC...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 72 bp CCCCGGCCAGGGTGGCACATGGCTGCTCTTTCAATGTaGAGCCAACACCAACTGGAGAGATTTAACTATAAA +
Preference number: 3 (lower is better)
Translates to: PRPGWHMAALSM*SQHQLERFNYK
Trigger: TTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 72 bp TCCTGGCCTTCAAAACAAACTCCAGGGCTTCCACTCTaGAAGGCAAAGGAATCACCTCGTGTTTGCTTCATC +
Preference number: 3 (lower is better)
Translates to: SWPSKQTPGLPL*KAKESPRVCFI
Trigger: GATGAAGCAAACACGAGGTGATTCCTTTGCCTTTCAGAGTGGAAGCCCTGGAGTTTGTTTTGAAGGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp ACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTaGGTTTCTATATGGGTCAACCAAATGCCATCCTTT +
Preference number: 3 (lower is better)
Translates to: TNTRPPGPETSF*VSIWVNQMPSF
Trigger: AAAGGATGGCATTTGGTTGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAAAGCCTCTGGCCTGCTaGTCCTGTCTTAAAAGTCAT +
Preference number: 3 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEKPLAC*SCLKSH
Trigger: ATGACTTTTAAGACAGGACAAGCAGGCCAGAGGCTT...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGGAGGGACAAGGCCATTaGATGGTAGTGATTTTGGTT +
Preference number: 3 (lower is better)
Translates to: TAPKRTERASFPRLQEHWEGQGH*MVVILV
Trigger: AACCAAAATCACTACCATCAAATGGCCTTGTCCCTC...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp AATCTATCCTGGTCTTCACCTGAAACACTCATCTACTaGTGGGTGGCAGGAACAAGTATACAAAACCAGGGG +
Preference number: 3 (lower is better)
Translates to: NLSWSSPETLIY*WVAGTSIQNQG
Trigger: CCCCTGGTTTTGTATACTTGTTCCTGCCACCCAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGGATAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CCA 72 bp ACAAAGACCAAATTGCTGAGGCCAGAAGCCTGCTTATaGTACTGTGACTTATGGGGAGTAGAGGCCAAATCA +
Preference number: 3 (lower is better)
Translates to: TKTKLLRPEACL*YCDLWGVEAKS
Trigger: TGATTTGGCCTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGTACCTAAGCACTTTCTaGTCTACAGGAAGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: TAPKRTERASFPRLQEHWYLSTF*STGSLG
Trigger: ACCAAGACTTCCTGTAGACAAGAAAGTGCTTAGGTA...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR TCA 72 bp GGATTCACACTTAGAAAATCTATCCTGGTCTTCACCTaGAACACTCATCTACTGCTGGGTGGCAGGAACAAG +
Preference number: 3 (lower is better)
Translates to: GFTLRKSILVFT*NTHLLLGGRNK
Trigger: CTTGTTCCTGCCACCCAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGGATAGATTTTCTAAGTGTGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR GCA 72 bp AGACCTCATTCTGGGTTTCTATATGGGTCAACCAAATaGCATCCTTTCACTAAACCCAGGTGCAAAATGGGG +
Preference number: 3 (lower is better)
Translates to: RPHSGFLYGSTK*HPFTKPRCKMG
Trigger: CCCCATTTTGCACCTGGGTTTAGTGAAAGGATGGCATTTGGTTGACCCATATAGAAACCCAGAATGAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR-3UTR CAA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGGGCAGGAGTCTGTGTTaGGGGGTCTGTTTCAATACC +
Preference number: 3 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQGRSLC*GVCFNT
Trigger: GGTATTGAAACAGACCCCCAAACACAGACTCCTGCC...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCAGGGATGGGTCCTTaGCGGCCGCCCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFAGMGP*RPPPPS
Trigger: GCTGGGTGGGGGCGGCCGCCAAGGACCCATCCCTGC...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTCAGGCTGGGGACCACTaGAAGCTGGAGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFQAGDH*KLEAAG
Trigger: CCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTG...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTGAGAGACCCACTGCCTaGAGTCGCGCTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFERPTA*SRAASP
Trigger: CGGAGAGGCAGCGCGACTCCAGGCAGTGGGTCTCTC...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTGGAGCTGGCTATGGCTaGACAGTGCCTGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFGAGYG*TVPARP
Trigger: TGGCCGGGCAGGCACTGTCCAGCCATAGCCAGCTCC...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTAAGGGAGAACCTGCATaGAGTGCACACACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFKGEPA*SAHTPA
Trigger: GGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTT...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTGGGATTCAGCTCCCCTaGGTGGACAGTCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFGIQLP*VDSLWL
Trigger: CAACCACAGACTGTCCACTCAGGGGAGCTGAATCCC...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGAGCCCTTCTCCAACCCTaGAGCCCACAGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGALLQP*SPQQGC
Trigger: GCACCCCTGCTGTGGGCTTCAGGGTTGGAGAAGGGC...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGCAGGCTGGGGACCACTaGAAGCTGGAGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGQAGDH*KLEAAG
Trigger: CCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTG...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTGGCCAGCACCCATCTTaGATGCAAGGGAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFGQHPS*MQGRTC
Trigger: GCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCC...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCAAGCTGGAGGCGGCTaGGTATCAGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWQAGGG*VSGPGH
Trigger: GTGCCCAGGCCCTGATACCCAGCCGCCTCCAGCTTG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGAGCTGGGCGGGCATGTaGCCGGGGAGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGSWAGM*PGSSGT
Trigger: TGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCT...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTACCAGGGGCCTTGCCTaGGCAGTTCCTAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFTRGLA*AVPKGH
Trigger: ATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGGT...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTTGGATCTCACCCGGTTaGTCCCAGCCCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFWISPG*SQPFSN
Trigger: GTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCA...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGAAGGCTTCCTGTGCAGTaGCAGGGGGTGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGRLPVQ*QGVIRG
Trigger: CCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCT...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGGGGTGCCAGCTACATTaGGTGGGATGCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWGCQLH*VGCPGA
Trigger: AGCCCCTGGGCATCCCACCCAATGTAGCTGGCACCC...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGCGCTGTCCTTTTCCGTaGAGCAGAGGGGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGRCPFP*SRGAPA
Trigger: TGCGGGCGCCCCTCTGCTCCACGGAAAAGGACAGCG...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGACAGGCCTCCTGGCCCTaGGACCTCATTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGQASWP*DLILGF
Trigger: GAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTG...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCGCCCTTCTCCAACCCTaGAGCCCACAGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIALLQP*SPQQGC
Trigger: GCACCCCTGCTGTGGGCTTCAGGGTTGGAGAAGGGC...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGGCCCGCCTCGAGCATaGCCGAGACGTGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDGPPRA*PRRGRS
Trigger: GCTGCGTCCACGTCTCGGGCATGCTCGAGGCGGGCC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGGGCAGCCCCAGATCGTaGAGACATCACCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGGSPRS*RHHPRL
Trigger: GAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCC...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGGAGGACTTGGCAGTGTaGAGGCGAGCAGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGEDLAV*RRAAQL
Trigger: GAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTC...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACAGGTGGGCTCTGAGCTaGCGGCGCTACCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDRWALS*RRYRPG
Trigger: GCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCT...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCAGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCAGCAGAAGCCTCACAGTaGGCCAGCACCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPAEASQ*ASTHLA
Trigger: TGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGC...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGATGGCACAGCGGACCCTaGCAGTTTGCTCACACCTGG +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGWHSGP*QFAHTW
Trigger: CCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCA...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGACCTCAGGTGGGCTCTaGGCTGGCGGCGCTACCGCC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQTSGGL*AGGATA
Trigger: GGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR TCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTCAGCAGTACGGTCAATaGGCACATACAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFQQYGQ*AHTRTR
Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTG...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGACCTGCAGACATCCCCTaGCGTGGACACGGGAGATAT +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGPADIP*RGHGRY
Trigger: ATATCTCCCGTGTCCACGTCAGGGGATGTCTGCAGG...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGCAGGCTGGGGACCACTaGAAGCTGGAGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPQAGDH*KLEAAG
Trigger: CCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTG...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCACCATGGCTCCACCTaGTCAAGAGCATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWHHGST*SRAWRR
Trigger: CCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTTGGCTGGACAGTGCCTaGCCGGCCAGAGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPWLDSA*PARGRP
Trigger: TGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCA...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCGGCTGCGCGCGGCGTaGGGGACTCCGATCCTAGAG +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSRLRAA*GTPILE
Trigger: CTCTAGGATCGGAGTCCCCCACGCCGCGCGCAGCCG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTATCCTGCAGATGTCCTaGCTGGATGGCGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFILQMS*LDGVIE
Trigger: TTCTATCACGCCATCCAGCCAGGACATCTGCAGGAT...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGGCCTGGTGCACGAAGTaGAGGCTTCCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGAWCTK*RLPVQW
Trigger: CCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGC...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGCAGTCTGTGGTTGCCTaGGGTCCCCAGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRQSVVA*GPQAEK
Trigger: CTTCTCAGCCTGGGGACCCCAGGCAACCACAGACTG...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCAGAACATTGGCAGAGCTaGTGGCCACACCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPEHWQS*WPHQMG
Trigger: TCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTC...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGAAGGCCTGCATGCCTGTaGCCAGGTAGGACACATGTG +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGRPACL*PGRTHV
Trigger: CACATGTGTCCTACCTGGCCACAGGCATGCAGGCCT...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGAAAGAAGTCCTCCGGTaGAGCCGATGGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWKEVLR*SRWPQP
Trigger: TGGTTGTGGCCATCGGCTTCACCGGAGGACTTCTTT...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTCACTTCGGGGCACAGTaGACACAGGCACGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLHFGAQ*TQARAG
Trigger: TCCAGCCCGTGCCTGTGTTCACTGTGCCCCGAAGTG...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGGAGAGGGCTGGCTGGTaGTACCCCAGACCACTTGCC +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGERAGW*YPRPLA
Trigger: GGCAAGTGGTCTGGGGTATCACCAGCCAGCCCTCTC...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCAAGGGAGAACCTGCATaGAGTGCACACACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIKGEPA*SAHTPA
Trigger: GGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTT...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTCAGAGCCAGCCCACCTaGCTCTTGGCCCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPQSQPT*LLALVV
Trigger: CACTACCAGGGCCAAGAGGCAGGTGGGCTGGCTCTG...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTCTGAGGCCAGAAGCCTaGTTATGGTACTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFLRPEA*LWYCDL
Trigger: TAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAG...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCATTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGCAAGCTGGAGGCGGCTaGGTATCAGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPQAGGG*VSGPGH
Trigger: GTGCCCAGGCCCTGATACCCAGCCGCCTCCAGCTTG...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGCCGGCTTCGGGACGTaGCCTCACCATCCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDAGFGT*PHHPPS
Trigger: AGAAGGCGGATGGTGAGGCCACGTCCCGAAGCCGGC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGTGCAGTGGCAGGGGGTaGTCAGGGGGCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGCSGRG*SGGSHH
Trigger: ATGATGAGAGCCCCCTGATCACCCCCTGCCACTGCA...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGCGTGTCGGAGCTCTTaGTCCACTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDACRSS*STAAGR
Trigger: CCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGAAAGAAGTCCTCCGGTaGAGCCGATGGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRKEVLR*SRWPQP
Trigger: TGGTTGTGGCCATCGGCTTCACCGGAGGACTTCTTT...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTGCCTGGAGTCGCGCTaGCTCTCCGCGGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSCLESR*LSAGST
Trigger: CGTGGAGCCCGCGGAGAGGCAGCGCGACTCCAGGCA...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGGCGCTGACCGTTTCTaGGATTCCTGGTTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTGADRF*DSWFRS
Trigger: CGAGCGGAACCAGGAATCGCAGAAACGGTCAGCGCC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTGAGCTCTTGATCCACTaGTGCAGGCAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLELLIH*CRQAWC
Trigger: GCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTC...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGAGCTCTTGATCCACTaGTGCAGGCAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTELLIH*CRQAWC
Trigger: GCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTCACTCCCCAATGCTCTaGTCCAGGCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTHSPML*SRLGTT
Trigger: AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTG...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPILDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCGGCCAGCACCCATCTTaGATGCAAGGGAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCGQHPS*MQGRTC
Trigger: GCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCC...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTCGGACCCTGGCAGTTTaGTCACACCTGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVRTLAV*SHLALV
Trigger: GACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCG...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACCTACATTGGGTGGGATaGCCAGGGGCTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: QWASTHLACKGEPACSAHLHWVG*PGAVPT
Trigger: GGTAGGGACAGCCCCTGGGCATCCCACCCAATGTAG...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCGTTTCTGCGATTCCTaGTTCCGCTCGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCRFCDS*FRSARP
Trigger: GGGCCGGGCCGAGCGGAACCAGGAATCGCAGAAACG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGGCAGAGATGGCATCCTaGGATGGAATGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWAEMAS*DGMAEI
Trigger: GATCTCTGCCATTCCATCCCAGGATGCCATCTCTGC...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTGCCTGGTGCACGAAGTaGAGGCTTCCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLAWCTK*RLPVQW
Trigger: CCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGC...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGGGGCAGGAACTCTGCTaGCTCCCCATGATGTCATCA +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGGQELC*LPMMSS
Trigger: TGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCC...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGCAAGCTGGAGGCGGCTaGGTATCAGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQQAGGG*VSGPGH
Trigger: GTGCCCAGGCCCTGATACCCAGCCGCCTCCAGCTTG...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTTGCTCTGCTCCAGGCTaGGGACCACTGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTCSAPG*GPLQAG
Trigger: TCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCA...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGAGCTGGGCGGGCATGTaGCCGGGGAGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQSWAGM*PGSSGT
Trigger: TGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCT...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGGGAGCTGGCTATGGCTaGACAGTGCCTGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVGAGYG*TVPARP
Trigger: TGGCCGGGCAGGCACTGTCCAGCCATAGCCAGCTCC...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCACCAGGGGCCTTGCCTaGGCAGTTCCTAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPITRGLA*AVPKGH
Trigger: ATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGGT...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGCCTCTTCCCCTTCCCTaGCCTACAAATACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGPLPLP*PTNTRP
Trigger: AGGCCTGGTATTTGTAGGCCAGGGAAGGGGAAGAGG...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCAGGCCTGCATGCCTGTaGCCAGGTAGGACACATGTG +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCRPACL*PGRTHV
Trigger: CACATGTGTCCTACCTGGCCACAGGCATGCAGGCCT...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGACCTGTGCAGGCTGCTaGCGCTCAAGCCGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPTCAGC*RSSRAR
Trigger: TCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGT...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453424.7
3UTR CAA 72 bp CCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCTaGCATGCAAGGGAGAACCTGCATGCAGTGCACACA +
Preference number: 4 (lower is better)
Translates to: PEQKPHSGPAPI*HARENLHAVHT
Trigger: TGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGACGTGGAATGTCACTaGGCACATGATCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRDVECH*AHDLPA
Trigger: CGCAGGAAGATCATGTGCTCAGTGACATTCCACGTC...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGGGATGTCCAGGAAAATaGCAACCCGCACACAATCAG +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWGCPGK*QPAHNQ
Trigger: CTGATTGTGTGCGGGTTGTCATTTTCCTGGACATCC...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGTCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGSWGSP*CRGNLL
Trigger: GAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGA...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGGGGCCAAGGGCCCTaGAGGATCCTGTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPWGQGP*RILSVQ
Trigger: CTGAACAGACAGGATCCTTCAGGGCCCTTGGCCCCA...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCACTTCGGGGCACAGTaGACACAGGCACGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSHFGAQ*TQARAG
Trigger: TCCAGCCCGTGCCTGTGTTCACTGTGCCCCGAAGTG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCTGCTTATGGTACTGTaGCTTATGGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWLLMVL*LMGSRG
Trigger: GCCTCTACTCCCCATAAGTCACAGTACCATAAGCAG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAACTGGCCCAGCTGCCTaGGGCCTGCATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSTGPAA*GLHACG
Trigger: GCCACAGGCATGCAGGCCTCAGGCAGCTGGGCCAGT...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGGGCAGAGAGACCCACTaGCTGGAGTCGCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQGRETH*LESRCL
Trigger: GAGGCAGCGCGACTCCAGGCAGTGGGTCTCTCTGCC...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGGAGCTCTTGATCCACTaGTGCAGGCAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPELLIH*CRQAWC
Trigger: GCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTC...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QWASTHLACKGEPACSAHLDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTLDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGCACCATGGCTCCACCTaGTCAAGAGCATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGHHGST*SRAWRR
Trigger: CCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTG...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGAGGGGTATGGGTAATTaGACTTCGGGGCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWRGMGN*TSGHSE
Trigger: TTCACTGTGCCCCGAAGTGCAATTACCCATACCCCT...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGTTTCAAGTGCGGAGCTaGCTTATACTCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWFQVRS*LILPGR
Trigger: TCTCCCAGGGAGTATAAGGCAGCTCCGCACTTGAAA...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGCCGGCCTAGAGCCCTaGGCGCTGACCGTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSAGLEP*ALTVSA
Trigger: CGCAGAAACGGTCAGCGCCCAGGGCTCTAGGCCGGC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGGATGTCCTGGCTGGATaGCGTGATAGAAGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGDVLAG*RDRSAR
Trigger: TCTCGCACTTCTATCACGCCATCCAGCCAGGACATC...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCAGGCTTCCTGTGCAGTaGCAGGGGGTGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCRLPVQ*QGVIRG
Trigger: CCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCT...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCCTGGTGCACGAAGTaGAGGCTTCCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQAWCTK*RLPVQW
Trigger: CCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGC...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTCTTCCTGCGCTCGCTaGACGTCATCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGSSCAR*TSSATS
Trigger: AGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGA...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGTGCTCTGCTCCAGGCTaGGGACCACTGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQCSAPG*GPLQAG
Trigger: TCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCA...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACACCCCGGCCAGGGTaGCACATGGCTGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDTPRPG*HMAALS
Trigger: TGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGT...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCTCAGGAGCTGGCTATaGCTGGACAGTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSLRSWL*LDSACP
Trigger: CGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGGGCTGGATGTGCCCTaGGAGACAGAAAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDGLDVP*ETERRG
Trigger: GCCTCTCCTTTCTGTCTCCCAGGGCACATCCAGCCC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGCCAGCTACATTGGGTaGGATGCCCAGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQASYIG*DAQGLS
Trigger: GGACAGCCCCTGGGCATCCCACCCAATGTAGCTGGC...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCGCCAGCTACATTGGGTaGGATGCCCAGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSASYIG*DAQGLS
Trigger: GGACAGCCCCTGGGCATCCCACCCAATGTAGCTGGC...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCGGGTGCCAGCTACATTaGGTGGGATGCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSGCQLH*VGCPGA
Trigger: AGCCCCTGGGCATCCCACCCAATGTAGCTGGCACCC...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGACATCCAGAGACTTGTaGATCTCACCCGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGTSRDL*ISPGWS
Trigger: GGACCAACCGGGTGAGATCCACAAGTCTCTGGATGT...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTATGTCACTGAGCACATaGTCTTCCTGCGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTMSLST*SSCARW
Trigger: CCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACAT...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGCAGCAGTACGGTCAATaGGCACATACAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGQQYGQ*AHTRTR
Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTG...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGTCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQSWGSP*CRGNLL
Trigger: GAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGA...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGGCTGCTCTTTCAATGTaGAGCCAACACCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGAALSM*SQHQLE
Trigger: CTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGC...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGCAGGCCTCCTGGCCCTaGGACCTCATTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVQASWP*DLILGF
Trigger: GAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTG...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGACAAAGACCAAATTGCTaGGGCCAGAAGCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGQRPNC*GQKPAY
Trigger: ATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTG...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGATCTGATGCAGTGGCATaGTCATCCCAACCTCTTATC +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGSDAVA*SSQPLI
Trigger: GATAAGAGGTTGGGATGAGCATGCCACTGCATCAGA...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGCACCATGGCTCCACCTaGTCAAGAGCATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPHHGST*SRAWRR
Trigger: CCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTG...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTATGCAAGGGAGAACCTaGATGCAGTGCACACACCCC +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLMQGRT*MQCTHP
Trigger: GGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCAT...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACCTCCCATCTCCTCCGTaGAGGCTGGGTGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDLPSPP*RLGERM
Trigger: CATTCTCTCACCCAGCCTGCACGGAGGAGATGGGAG...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGTCATCTCCTTCACAGTaGCAGATCCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGSSPSQ*QILQMS
Trigger: GGACATCTGCAGGATCTGCCACTGTGAAGGAGATGA...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCAAGCTGGAGGCGGCTaGGTATCAGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSQAGGG*VSGPGH
Trigger: GTGCCCAGGCCCTGATACCCAGCCGCCTCCAGCTTG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTGCTCTGCTCCAGGCTaGGGACCACTGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCCSAPG*GPLQAG
Trigger: TCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCA...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGAGCAGGAGTCTGTGTTTaGGGGTCTGTTTCAATACCA +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGAGVCV*GSVSIP
Trigger: TGGTATTGAAACAGACCCCCAAACACAGACTCCTGC...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCAGTTTGCTCACACCTaGCCCTCGTCCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCQFAHT*PSSQSQ
Trigger: CTGGCTCTGGGACGAGGGCCAGGTGTGAGCAAACTG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCAGTTTGCTCACACCTaGCCCTCGTCCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSQFAHT*PSSQSQ
Trigger: CTGGCTCTGGGACGAGGGCCAGGTGTGAGCAAACTG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGGGCTGGATGTGCCCTaGGAGACAGAAAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQGLDVP*ETERRG
Trigger: GCCTCTCCTTTCTGTCTCCCAGGGCACATCCAGCCC...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTTGGCAGGGCTGACCTaGGATTCAGCTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPLAGLT*DSAPLS
Trigger: ACTCAGGGGAGCTGAATCCCAGGTCAGCCCTGCCAA...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCACTGGTAGAGTCATTTTaGGCCATGGATTTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPLVESF*AMDFKC
Trigger: GCACTTGAAATCCATGGCCCAAAATGACTCTACCAG...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGCGTGTCGGAGCTCTTaGTCCACTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSACRSS*STAAGR
Trigger: CCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGGCGTGTCGGAGCTCTTaGTCCACTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSACRSS*STAAGR
Trigger: CCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGC...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGACGTGGAATGTCACTaGGCACATGATCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTDVECH*AHDLPA
Trigger: CGCAGGAAGATCATGTGCTCAGTGACATTCCACGTC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCSWGSP*CRGNLL
Trigger: GAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGA...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGGTGCTGTTTGCTCAGTaGATCATGCGCCACCACAGA +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGVLFAQ*IMRHHR
Trigger: TCTGTGGTGGCGCATGATTCACTGAGCAAACAGCAC...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGCCAGGGCTTCCACTCTaGAAGGCAAAGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGPGLPL*KAKESP
Trigger: AGGTGATTCCTTTGCCTTTCAGAGTGGAAGCCCTGG...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGAGCAGTGGCACAGCGGACCCTGGCAGTTTGCTCACACCTGGCCCTCGTCCCACATCTAACTGTGCACTaGTCAACTGCACAACTTCAA +
Preference number: 4 (lower is better)
Translates to: GAVAQRTLAVCSHLALVPHLTVH*STAQLQ
Trigger: TTGAAGTTGTGCAGTTGATCAGTGCACAGTTAGATG...TGGGACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGCTGTGCCACTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGTCTCACCCACATCATTaGGGGACCTTGAGAACTTTA +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWSHPHH*GTLRTL
Trigger: TAAAGTTCTCAAGGTCCCTCAATGATGTGGGTGAGA...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCAAGCCGTGCGAGAGTaGGAACAGGTACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSQAVRE*EQVLEQ
Trigger: CTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTAGGATTCCTGTTGCCTaGCCCTGCTTGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPRIPVA*PCLISS
Trigger: TGAGGAGATCAAGCAGGGGCAGGCAACAGGAATCCT...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACCATGGGCAGGAACTCTaGTGGCTCCCCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDHGQEL*WLPMMS
Trigger: TGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATG...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCAGAGCCAGCCCACCTaGCTCTTGGCCCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSQSQPT*LLALVV
Trigger: CACTACCAGGGCCAAGAGGCAGGTGGGCTGGCTCTG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGTGGAAAGGAAGCATCTaGGCTACATTGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRWKGSI*ATLCFR
Trigger: CCTGAAGCACAATGTAGCGCAGATGCTTCCTTTCCA...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCTCCCATCTCCTCCGTaGAGGCTGGGTGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCLPSPP*RLGERM
Trigger: CATTCTCTCACCCAGCCTGCACGGAGGAGATGGGAG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTTTTGCCATAGTGGGGTaGCAGCTACATTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTFAIVG*QLHWVG
Trigger: TCCCACCCAATGTAGCTGGCACCCCACTATGGCAAA...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAAGGTACTGGAGCAGTTaGCGGCTTCGGGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSRYWSS*RLRDVA
Trigger: GGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCT...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACGATGTCCTGGCTGGATaGCGTGATAGAAGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: QWASTHLACKGEPACSAHDVLAG*RDRSAR
Trigger: TCTCGCACTTCTATCACGCCATCCAGCCAGGACATC...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGGGCAGGAACTCTGCTaGCTCCCCATGATGTCATCA +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDGQELC*LPMMSS
Trigger: TGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGAATCAGACACTGGCTTaGAGGAGACAGGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRNQTLA*RRQEDK
Trigger: TTTGTCCTCCTGTCTCCTCCAAGCCAGTGTCTGATT...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTCTTCCCATGAGAATCTaGCTGGGCATGGGAGGGATA +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTLPMRI*LGMGGI
Trigger: TATCCCTCCCATGCCCAGCCAGATTCTCATGGGAAG...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCCAGAAAACACTGCACTaGAACTGCAGATGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCQKTLH*NCRCPG
Trigger: GCCAGGACATCTGCAGTTCCAGTGCAGTGTTTTCTG...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
3UTR CAA 72 bp CTGGGTGGCAGGAACAAGTATACAAAACCAGGGGCCTaGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGRNKYTKPGA*PGQFLRDIGRA
Trigger: AGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGGTTTTGTATACTTGTTCCTGCCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGCGTGTCGGAGCTCTTaGTCCACTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSACRSS*STAAGR
Trigger: CCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTGACGTGGAATGTCACTaGGCACATGATCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVDVECH*AHDLPA
Trigger: CGCAGGAAGATCATGTGCTCAGTGACATTCCACGTC...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCAAAGAAGTCCTCCGGTaGAGCCGATGGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCKEVLR*SRWPQP
Trigger: TGGTTGTGGCCATCGGCTTCACCGGAGGACTTCTTT...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGACACATGTGCAGGTTTaGAAACTAGGCCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGTHVQV*KLGLQD
Trigger: GTCTTGTAGGCCTAGTTTTCAAACCTGCACATGTGT...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGACTGGCCCAGCTGCCTaGGGCCTGCATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWTGPAA*GLHACG
Trigger: GCCACAGGCATGCAGGCCTCAGGCAGCTGGGCCAGT...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GGGTGCAGAGGCAGCCCCAGATCGTGCAGACATCACCCGAGGCTCCCAAACTGGCTGAGACACGTATCTTaGGGGAGTATTAATTTCCCT +
Preference number: 4 (lower is better)
Translates to: GCRGSPRSCRHHPRLPNWLRHVS*GSINFP
Trigger: AGGGAAATTAATACTCCCTCAAGATACGTGTCTCAG...CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGCATGGGCAGGAACTCTaGTGGCTCCCCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQHGQEL*WLPMMS
Trigger: TGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATG...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCAGGCTGGGGACCACTaGAAGCTGGAGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWQAGDH*KLEAAG
Trigger: CCCAGCCGCCTCCAGCTTGCAGTGGTCCCCAGCCTG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCACACTCCCCAATGCTCTaGTCCAGGCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSHSPML*SRLGTT
Trigger: AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTG...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTTTGCTCAGTGAATCATaGGCCACCACAGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLLLSES*ATTEHH
Trigger: ATGGTGCTCTGTGGTGGCGCATGATTCACTGAGCAA...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAAGAACCTGCATGCAGTaGACACACCCCGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSRTCMQ*THPGQG
Trigger: ACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCT...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACTCCCTGATGACAGAATaGACTGAGAGTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDSLMTE*TESGAK
Trigger: CTTGGCCCCACTCTCAGTGCATTCTGTCATCAGGGA...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTAGGGGTATGGGTAATTaGACTTCGGGGCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTRGMGN*TSGHSE
Trigger: TTCACTGTGCCCCGAAGTGCAATTACCCATACCCCT...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCTACATTGGGTGGGATaGCCAGGGGCTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSLHWVG*PGAVPT
Trigger: GGTAGGGACAGCCCCTGGGCATCCCACCCAATGTAG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGCCATGGATTTCAAGTaGGGAGCTGCCTTATACTCC +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTAMDFK*GAALYS
Trigger: GGAGTATAAGGCAGCTCCGCACTTGAAATCCATGGC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGGAGTTACCTCAGGTaGGCTCTGAGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSRSYLR*ALSWRR
Trigger: GCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCT...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGGCTATGCTTTCCTTCTaGCACCCCGAATGTACGCAG +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPAMLSF*HPECTQ
Trigger: CTGCGTACATTCGGGGTGCCAGAAGGAAAGCATAGC...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTAGAGATCTGATGCAGTaGCATGCTCATCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLRDLMQ*HAHPNL
Trigger: GAGGTTGGGATGAGCATGCCACTGCATCAGATCTCT...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACGATGGCATCCTGGGATaGAATGGCAGAGATCTGATG +
Preference number: 4 (lower is better)
Translates to: QWASTHLACKGEPACSAHDGILG*NGRDLM
Trigger: CATCAGATCTCTGCCATTCCATCCCAGGATGCCATC...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTGCAGAGATGGCATCCTaGGATGGAATGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVAEMAS*DGMAEI
Trigger: GATCTCTGCCATTCCATCCCAGGATGCCATCTCTGC...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGGCTTCCTGTGCAGTaGCAGGGGGTGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSRLPVQ*QGVIRG
Trigger: CCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCT...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGCTGGGCGGGCATGTGGCCGGGGAGCAGTGGCACAGCGGACCCTGGCAGTTTGTTTATTTTCAAAGTTaGGCTCTGTTAGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: QLGGHVAGEQWHSGPWQFVYFQS*ALLVEI
Trigger: AATCTCCACTAACAGAGCCCAACTTTGAAAATAAAC...AAACTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGTTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGGCCAGGGTGGCACATaGCTGCTCTTTCAATGTGAA +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQGQGGT*LLFQCE
Trigger: TTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCC...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTGTCTGTTCAGTCTaGTTAAGGCGACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSPVCSV*LRRQLG
Trigger: GCCCAGCTGTCGCCTTAACCAGACTGAACAGACAGG...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGCCTGTCTGTTCAGTCTaGTTAAGGCGACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVPVCSV*LRRQLG
Trigger: GCCCAGCTGTCGCCTTAACCAGACTGAACAGACAGG...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCTCCTCCGTGCAGGCTaGGTGAGAGAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSLLRAG*VREWPG
Trigger: TCCAGGCCATTCTCTCACCCAGCCTGCACGGAGGAG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGCATTGGCAGAGCTGGTaGCCACACCAGATGGGAGTA +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVHWQSW*PHQMGV
Trigger: TACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATG...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGTGGTACTGTGACTTATaGGGAGTAGAGGCCAAATCA +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGWYCDL*GVEAKS
Trigger: TGATTTGGCCTCTACTCCCCATAAGTCACAGTACCA...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCAGGGGCCTTGCCTGGGCAGTTCCTAAGGGACATTGGCAGGGCTGACCTGGGATACAAGACTGAAGAGTaGACTGAAGCAAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGALPGQFLRDIGRADLGYKTEE*TEAKRG
Trigger: TCCCCTTTTTGCTTCAGTCCACTCTTCAGTCTTGTA...TCCCAGGTCAGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGCCGAGGCTCCCAAACTaGCCCAGCTGCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLLRPEACLWYCDLWGVEPRLPN*PSCLRP
Trigger: AGGCCTCAGGCAGCTGGGCCAGTTTGGGAGCCTCGG...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGACATCCAGAGACTTGTaGATCTCACCCGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPTSRDL*ISPGWS
Trigger: GGACCAACCGGGTGAGATCCACAAGTCTCTGGATGT...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGCTGGTAGAGTCATTTTaGGCCATGGATTTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRLVESF*AMDFKC
Trigger: GCACTTGAAATCCATGGCCCAAAATGACTCTACCAG...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
3UTR CAA 72 bp GCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTaGCCAAGGAATCAGACACTGGCTTGGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ATAEPLHRLRPV*PRNQTLAWRRQ
Trigger: CTGTCTCCTCCAAGCCAGTGTCTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCGGAATGGCAGAGATCTaGTGCAGTGGCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSGMAEI*CSGMLI
Trigger: GATGAGCATGCCACTGCATCAGATCTCTGCCATTCC...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGGATGTCCAGGAAAATaGCAACCCGCACACAATCAG +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDGCPGK*QPAHNQ
Trigger: CTGATTGTGTGCGGGTTGTCATTTTCCTGGACATCC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCATGGGGCCAAGGGCCCTaGAGGATCCTGTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSWGQGP*RILSVQ
Trigger: CTGAACAGACAGGATCCTTCAGGGCCCTTGGCCCCA...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGGGATTCAGCTCCCCTaGGTGGACAGTCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSGIQLP*VDSLWL
Trigger: CAACCACAGACTGTCCACTCAGGGGAGCTGAATCCC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTCTGCTTATGGTACTGTaGCTTATGGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVLLMVL*LMGSRG
Trigger: GCCTCTACTCCCCATAAGTCACAGTACCATAAGCAG...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGTCCTCTATTACAGATaGCAAACTCCATGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDVLYYR*QTPWGL
Trigger: GAGGCCCCATGGAGTTTGTCATCTGTAATAGAGGAC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTTGCACGGAACTGTGGTaGCAACACTCAGAAAACACT +
Preference number: 4 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPCTELW*QHSENT
Trigger: AGTGTTTTCTGAGTGTTGTCACCACAGTTCCGTGCA...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCATGCAGGCAGGCCTGGTaGACGAAGTGGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSCRQAW*TKWRLP
Trigger: AGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCA...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCACCATGGCTCCACCTaGTCAAGAGCATGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSHHGST*SRAWRR
Trigger: CCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGTGGCTGGACAGTGCCTaGCCGGCCAGAGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWWLDSA*PARGRP
Trigger: TGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCA...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTTATCAAGGCACCTTTaGCATAGTGGGGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPLSRHL*HSGVPA
Trigger: AGCTGGCACCCCACTATGGCAAAGGTGCCTTGATAA...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGTATGGGTCAACCAAATaGCATCCTTTCACTAAACCC +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRYGSTK*HPFTKP
Trigger: GGGTTTAGTGAAAGGATGGCATTTGGTTGACCCATA...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGAGCATGCCCGAGACGTaGACGCAGCAAGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWSMPET*TQQGRT
Trigger: GGTGCGGCCTTGCTGCGTCCACGTCTCGGGCATGCT...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGCCTGGTGCACGAAGTaGAGGCTTCCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSAWCTK*RLPVQW
Trigger: CCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCATGCTGCAGGCAGGCCTaGTGCACGAAGTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSCCRQA*CTKWRL
Trigger: AAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCA...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGCCCATGATGTCATCATaGGGTCTTCCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPPMMSS*GLPLSH
Trigger: GTGGGAAAGTGGAAGACCCCATGATGACATCATGGG...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVGIFSS*LDTPQC
Trigger: GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCC...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDGIFSS*LDTPQC
Trigger: GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGCAGGAGTCTGTGTTTaGGGGTCTGTTTCAATACCA +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTAGVCV*GSVSIP
Trigger: TGGTATTGAAACAGACCCCCAAACACAGACTCCTGC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGCAGAAGCCTCACAGTaGGCCAGCACCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSAEASQ*ASTHLA
Trigger: TGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTGATCCTTCAGCCTCCTaGCCTTCAAAACAAACTCCA +
Preference number: 4 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPDPSAS*PSKQTP
Trigger: TGGAGTTTGTTTTGAAGGCCAGGAGGCTGAAGGATC...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCAAGGAATCAGACACTaGCTTGGAGGAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCQGIRH*LGGDRR
Trigger: CCTCCTGTCTCCTCCAAGCCAGTGTCTGATTCCTTG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGTTCTGGGTTTCTATATaGGTCAACCAAATGCCATCC +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGFWVSI*VNQMPS
Trigger: GGATGGCATTTGGTTGACCCATATAGAAACCCAGAA...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCCCTGAGACCTCATTCTaGGTTTCTATATGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCPETSF*VSIWVN
Trigger: GTTGACCCATATAGAAACCCAGAATGAGGTCTCAGG...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGCCTCTTCCCCTTCCCTaGCCTACAAATACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQPLPLP*PTNTRP
Trigger: AGGCCTGGTATTTGTAGGCCAGGGAAGGGGAAGAGG...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGCCGAGGCTCCCAAACTaGCCCAGCTGCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLPRLPN*PSCLRP
Trigger: AGGCCTCAGGCAGCTGGGCCAGTTTGGGAGCCTCGG...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGTGCAGTGGCAGGGGGTaGTCAGGGGGCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TAPKRTERASFPRLQEHWCSGRG*SGGSHH
Trigger: ATGATGAGAGCCCCCTGATCACCCCCTGCCACTGCA...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCACAATCAGACGTGAATaGTTTCTGCTCCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCTIRRE*FLLQCL
Trigger: AAGACACTGGAGCAGAAATCATTCACGTCTGATTGT...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGGATGTCCAGGAAAATaGCAACCCGCACACAATCAG +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQGCPGK*QPAHNQ
Trigger: CTGATTGTGTGCGGGTTGTCATTTTCCTGGACATCC...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGGTGCTGTTTGCTCAGTaGATCATGCGCCACCACAGA +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQVLFAQ*IMRHHR
Trigger: TCTGTGGTGGCGCATGATTCACTGAGCAAACAGCAC...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACATCCTGGTCTTCACCTaGAACACTCATCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDILVFT*NTHLLL
Trigger: CAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGGAT...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCAGAGAGGGCTGGCTGGTaGTACCCCAGACCACTTGCC +
Preference number: 4 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPERAGW*YPRPLA
Trigger: GGCAAGTGGTCTGGGGTATCACCAGCCAGCCCTCTC...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGTCTGATGCAGTGGCATaGTCATCCCAACCTCTTATC +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQSDAVA*SSQPLI
Trigger: GATAAGAGGTTGGGATGAGCATGCCACTGCATCAGA...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR GCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGTGCAGGCAGGCCTGGTaGACGAAGTGGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TAPKRTERASFPRLQEHWCRQAW*TKWRLP
Trigger: AGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCA...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCCTGTTGCCTGCCCCTaGTTGATCTCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSPVACP*LISSAV
Trigger: TACTGCTGAGGAGATCAAGCAGGGGCAGGCAACAGG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGATTCCTGTTGCCTaGCCCTGCTTGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQRIPVA*PCLISS
Trigger: TGAGGAGATCAAGCAGGGGCAGGCAACAGGAATCCT...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGAGGGTGGCACATGGCTaGTCTTTCAATGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQRVAHG*SFNVKP
Trigger: TGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGAGCACCCATCTTGCATaGAAGGGAGAACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQSTHLA*KGEPAC
Trigger: GCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCT...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACGGACCCTGGCAGTTTaGTCACACCTGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRRTLAV*SHLALV
Trigger: GACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCG...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGAGGCAGCCCCAGATCGTaGAGACATCACCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRGSPRS*RHHPRL
Trigger: GAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCC...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGCCATGGATTTCAAGTaGGGAGCTGCCTTATACTCC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQAMDFK*GAALYS
Trigger: GGAGTATAAGGCAGCTCCGCACTTGAAATCCATGGC...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGAGAGATCTGATGCAGTaGCATGCTCATCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQRDLMQ*HAHPNL
Trigger: GAGGTTGGGATGAGCATGCCACTGCATCAGATCTCT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCAGAGATCTGATGCAGTaGCATGCTCATCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSRDLMQ*HAHPNL
Trigger: GAGGTTGGGATGAGCATGCCACTGCATCAGATCTCT...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGATCCTGCAGATGTCCTaGCTGGATGGCGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQILQMS*LDGVIE
Trigger: TTCTATCACGCCATCCAGCCAGGACATCTGCAGGAT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGTCATCTCCTTCACAGTaGCAGATCCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQSSPSQ*QILQMS
Trigger: GGACATCTGCAGGATCTGCCACTGTGAAGGAGATGA...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
CDS-3UTR CCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGTCTTCCTGCGCTCGCTaGACGTCATCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQSSCAR*TSSATS
Trigger: AGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGA...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGCCCATGATGTCATCATaGGGTCTTCCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQPMMSS*GLPLSH
Trigger: GTGGGAAAGTGGAAGACCCCATGATGACATCATGGG...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGCCCATGATGTCATCATaGGGTCTTCCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVPMMSS*GLPLSH
Trigger: GTGGGAAAGTGGAAGACCCCATGATGACATCATGGG...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGTGGCCGGGGAGCAGTaGCACAGCGGACCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDVAGEQ*HSGPWQ
Trigger: CTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCAC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGGGCTGGGTGAGAGAATaGCCTGGAAAGGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQGWVRE*PGKEAS
Trigger: AGATGCTTCCTTTCCAGGCCATTCTCTCACCCAGCC...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGCTCCTCCGTGCAGGCTaGGTGAGAGAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TAPKRTERASFPRLQEHWLLRAG*VREWPG
Trigger: TCCAGGCCATTCTCTCACCCAGCCTGCACGGAGGAG...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGAATCAGACACTGGCTTaGAGGAGACAGGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQNQTLA*RRQEDK
Trigger: TTTGTCCTCCTGTCTCCTCCAAGCCAGTGTCTGATT...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCTACAAGACTGAAGAGTaGACTGAAGCAAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIYKTEE*TEAKRG
Trigger: TCCCCTTTTTGCTTCAGTCCACTCTTCAGTCTTGTA...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 72 bp TGCCCCGCCAGGAGAGGAAAGAAGAATGTGTGTGGATaGTCCACAGTGAGGCCAGAAACGATGAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: CPARRGKKNVCG*STVRPETMRWC
Trigger: ACACCATCTCATCGTTTCTGGCCTCACTGTGGACAATCCACACACATTCTTCTTTCCTCTCCTGGCGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 72 bp TCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACTaGTGGATCTCACCCGGTTGGTCCCAGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SIVYLPSATSRD*WISPGWSQPFS
Trigger: GGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGGAAATGTTGCTTGAATaGCTCATGAAATGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGEMLLE*LMKCPK
Trigger: TTTGGGACATTTCATGAGTCATTCAAGCAACATTTC...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGCTTAGAAATGTTGCTTaGATGACTCATGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGLRNVA*MTHEMS
Trigger: GGACATTTCATGAGTCATTCAAGCAACATTTCTAAG...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAATGTCACTGAGCACATaGTCTTCCTGCGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSMSLST*SSCARW
Trigger: CCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACAT...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGGGATGTCCAGGAAAATaGCAACCCGCACACAATCAG +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQGCPGK*QPAHNQ
Trigger: CTGATTGTGTGCGGGTTGTCATTTTCCTGGACATCC...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGATCCTGGTCTTCACCTaGAACACTCATCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVILVFT*NTHLLL
Trigger: CAGCAGTAGATGAGTGTTTCAGGTGAAGACCAGGAT...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAATGCAGGCAGGCCTGGTaGACGAAGTGGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGKGITSCLLHPLSRMNECRQAW*TKWRLP
Trigger: AGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCA...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGTGCAGGCAGGCCTGGTaGACGAAGTGGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWCRQAW*TKWRLP
Trigger: AGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCA...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACAAAAAGCCTCTGGCCTaGTTGTCCTGTCTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: QWASTHLACKGEPACSAHKKPLA*LSCLKS
Trigger: ACTTTTAAGACAGGACAAGCAGGCCAGAGGCTTTTT...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCATCCCTGATGACAGAATaGACTGAGAGTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSSLMTE*TESGAK
Trigger: CTTGGCCCCACTCTCAGTGCATTCTGTCATCAGGGA...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTTTGCCATAGTGGGGTaGCAGCTACATTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSFAIVG*QLHWVG
Trigger: TCCCACCCAATGTAGCTGGCACCCCACTATGGCAAA...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTGTGCACTGATCAACTaGACAACTTCAACAATTACT +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGCALIN*TTSTIT
Trigger: AGTAATTGTTGAAGTTGTGCAGTTGATCAGTGCACA...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGTTTCAAGTGCGGAGCTaGCTTATACTCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQFQVRS*LILPGR
Trigger: TCTCCCAGGGAGTATAAGGCAGCTCCGCACTTGAAA...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR GCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGCCTACTCTTCAGTTTTaGAGATGTGCTGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGPTLQF*RCAVLK
Trigger: TTTGAGGACAGCACATCTGCAAAACTGAAGAGTAGG...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCCCAACCTCTTATCTaGTCGTCTTCTTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVSQPLI*SSSSQK
Trigger: CTTCTGTGAAGAAGACGACCAGATAAGAGGTTGGGA...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATGCTGCAGGCAGGCCTaGTGCACGAAGTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRCCRQA*CTKWRL
Trigger: AAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGGCTCCCCATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGCTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 4 (lower is better)
Translates to: LAPHDVIMGSSTFPQSCQLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...CTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGGCCAGGGTGGCACATaGCTGCTCTTTCAATGTGAA +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSGQGGT*LLFQCE
Trigger: TTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAACACCCCGGCCAGGGTaGCACATGGCTGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KGKGITSCLLHPLSRMNETPRPG*HMAALS
Trigger: TGAAAGAGCAGCCATGTGCCACCCTGGCCGGGGTGT...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGTGGCCGGGGAGCAGTaGCACAGCGGACCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDVAGEQ*HSGPWQ
Trigger: CTGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCAC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTTAGAAAATCTATCCTaGTCTTCACCTGAAACACTC +
Preference number: 4 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGLENLS*SSPETL
Trigger: GAGTGTTTCAGGTGAAGACCAGGATAGATTTTCTAA...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGTTAGAAAATCTATCCTaGTCTTCACCTGAAACACTC +
Preference number: 4 (lower is better)
Translates to: PILHARENLHAVHTPRPGLENLS*SSPETL
Trigger: GAGTGTTTCAGGTGAAGACCAGGATAGATTTTCTAA...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTGTCTACAGGAAGTCTTaGTGCTTTTCAAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLVYRKS*CFSSSA
Trigger: TGCTGAACTTGAAAAGCACCAAGACTTCCTGTAGAC...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGGTGGCCACACCAGATaGGAGTACCACATCCCCACC +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWGGHTR*EYHIPT
Trigger: GGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTTTCTGGGTTTCTATATaGGTCAACCAAATGCCATCC +
Preference number: 4 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPFWVSI*VNQMPS
Trigger: GGATGGCATTTGGTTGACCCATATAGAAACCCAGAA...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACCCTGAGACCTCATTCTaGGTTTCTATATGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDPETSF*VSIWVN
Trigger: GTTGACCCATATAGAAACCCAGAATGAGGTCTCAGG...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGTGGATCTCACCCGGTTaGTCCCAGCCCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HSTQKNRESKFSKATGTLWISPG*SQPFSN
Trigger: GTTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCA...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGGAATGGCAGAGATCTaGTGCAGTGGCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSGMAEI*CSGMLI
Trigger: GATGAGCATGCCACTGCATCAGATCTCTGCCATTCC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATTGCAGTGGCAGGGGGTaGTCAGGGGGCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHCSGRG*SGGSHH
Trigger: ATGATGAGAGCCCCCTGATCACCCCCTGCCACTGCA...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATCCTGGGGTTCGCCGTaGTGCAGAGGGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRSWGSP*CRGNLL
Trigger: GAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCACACATGTGCAGGTTTaGAAACTAGGCCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCTHVQV*KLGLQD
Trigger: GTCTTGTAGGCCTAGTTTTCAAACCTGCACATGTGT...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGATGGATTTCAAGCTATaGTTTCCTTCTGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQMDFKL*FPSGTP
Trigger: CGGGGTGCCAGAAGGAAAGCATAGCTTGAAATCCAT...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATCACTCCCCAATGCTCTaGTCCAGGCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHHSPML*SRLGTT
Trigger: AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTG...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACCTTCAATTGTGTATTTaGCTTCAGCCACATCCAGAG +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDLQLCI*LQPHPE
Trigger: CTCTGGATGTGGCTGAAGGCAAATACACAATTGAAG...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGCTTTCTGAAGTATCCTaGGCCTTCTCACCCACATCA +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQLSEVS*AFSPTS
Trigger: TGATGTGGGTGAGAAGGCGCAGGATACTTCAGAAAG...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGCTGGCGCTCAAGCCGTaGGAGAGTGAGAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLLALKP*ESENRY
Trigger: GTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAG...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGGAACCTGTGCAGGCTaGTGGCGCTCAAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDGTCAG*WRSSRA
Trigger: CGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTTTATTTTCAAAGTTaGGCTCTGTTAGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRVYFQS*ALLVEI
Trigger: AATCTCCACTAACAGAGCCCAACTTTGAAAATAAAC...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCCTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGGAGTGTCAATCCCGCTaGACACACATATTACAAAAT +
Preference number: 4 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGECQSR*THILQN
Trigger: ATTTTGTAATATGTGTGTCCAGCGGGATTGACACTC...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCGAAGCCAACACCAACTaGAGAGATTTAACTATAAAG +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCEANTN*RDLTIK
Trigger: CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTC...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGTTGGCAGGGCTGACCTaGGATTCAGCTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLLAGLT*DSAPLS
Trigger: ACTCAGGGGAGCTGAATCCCAGGTCAGCCCTGCCAA...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCGTTCCATATGTGAAGTaGGGATTCACACTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCVPYVK*GFTLRK
Trigger: TTTTCTAAGTGTGAATCCCCACTTCACATATGGAAC...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCACTTCCCATGAGAATCTaGCTGGGCATGGGAGGGATA +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSLPMRI*LGMGGI
Trigger: TATCCCTCCCATGCCCAGCCAGATTCTCATGGGAAG...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGTGGTACTGTGACTTATaGGGAGTAGAGGCCAAATCA +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVWYCDL*GVEAKS
Trigger: TGATTTGGCCTCTACTCCCCATAAGTCACAGTACCA...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGTCATTTTGGGCCATaGATTTCAAGTGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQSHFGP*ISSAEL
Trigger: CAGCTCCGCACTTGAAATCCATGGCCCAAAATGACT...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGAGTCATTTTGGGCCATaGATTTCAAGTGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQSHFGP*ISSAEL
Trigger: CAGCTCCGCACTTGAAATCCATGGCCCAAAATGACT...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCAGCTCTCCAGCTCATaGAACCTGTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWQLSSS*NLCRLL
Trigger: CAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGATGTCACTGAGCACATaGTCTTCCTGCGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWMSLST*SSCARW
Trigger: CCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACAT...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GCTGGGCATGGGAGGGATACAGGGCTCAGTTATCAAGGCACCTTTGCCATAGTGGAGTTTGTGTCGGAATaGCAGATTCCATATCCATGT +
Preference number: 4 (lower is better)
Translates to: AGHGRDTGLSYQGTFAIVEFVSE*QIPYPC
Trigger: ACATGGATATGGAATCTGTCATTCCGACACAAACTC...CACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGACAATCAGACGTGAATaGTTTCTGCTCCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQTIRRE*FLLQCL
Trigger: AAGACACTGGAGCAGAAATCATTCACGTCTGATTGT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGTCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATCTGCTGGCTCCCCATaGTGTCATCATGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRSAGSP*CHHGVF
Trigger: GAAGACCCCATGATGACATCATGGGGAGCCAGCAGA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCAATCCCCTTAGCAGGATaGACGAAACGCCTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPIPLAG*TKRLRP
Trigger: GGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGAT...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGCCAGGGCTTCCACTCTaGAAGGCAAAGGAATCACCT +
Preference number: 4 (lower is better)
Translates to: KLLRPEACLWYCDLWGVEPGLPL*KAKESP
Trigger: AGGTGATTCCTTTGCCTTTCAGAGTGGAAGCCCTGG...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCAATACTTGGTCAAACTaGCGATATCCACAGCCCTAT +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCNTWSN*RYPQPY
Trigger: ATAGGGCTGTGGATATCGTCAGTTTGACCAAGTATT...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR GCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCGCTGGACGTCATCTaGAACTTCTCCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSSLDVI*NFSHFL
Trigger: GAGAAAATGGGAGAAGTTGCAGATGACGTCCAGCGA...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGCCTGTTGCCTGCCCCTaGTTGATCTCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLPVACP*LISSAV
Trigger: TACTGCTGAGGAGATCAAGCAGGGGCAGGCAACAGG...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGAGCACCCATCTTGCATaGAAGGGAGAACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: HSTQKNRESKFSKATGTLSTHLA*KGEPAC
Trigger: GCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCT...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCCCCACCAGGCTTCATaGTTCACTGCTAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWPHQAS*FTARCR
Trigger: CCTGCATCTAGCAGTGAAGCATGAAGCCTGGTGGGG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGCTAGAGACAGAAGCTaGATGTTTCAAACCAGATTC +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQARDRS*MFQTRF
Trigger: GAATCTGGTTTGAAACATGCAGCTTCTGTCTCTAGC...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAGGCTTCCTGTGCAGTaGCAGGGGGTGATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGRLPVQ*QGVIRG
Trigger: CCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCT...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGTCTTCCTGCGCTCGCTaGACGTCATCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: HSTQKNRESKFSKATGTLSSCAR*TSSATS
Trigger: AGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGA...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGACCCAGGCATGCCTaGCCCACAGGAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHGPRHA*PTGRFS
Trigger: AGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCC...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGGGACCACTGCAAGCTaGAGGCGGCTGGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDGTTAS*RRLGIR
Trigger: CCTGATACCCAGCCGCCTCCAGCTTGCAGTGGTCCC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTGAAGCCAACACCAACTaGAGAGATTTAACTATAAAG +
Preference number: 4 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTEANTN*RDLTIK
Trigger: CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTC...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGCAAGGAATCAGACACTaGCTTGGAGGAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TAPKRTERASFPRLQEHWQGIRH*LGGDRR
Trigger: CCTCCTGTCTCCTCCAAGCCAGTGTCTGATTCCTTG...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACCTCAGGAGCTGGCTATaGCTGGACAGTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDLRSWL*LDSACP
Trigger: CGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAG...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGCCTATTCTCAGGAGCTaGCTATGGCTGGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLPILRS*LWLDSA
Trigger: GGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGG...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAACCTATTCTCAGGAGCTaGCTATGGCTGGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEPILRS*LWLDSA
Trigger: GGCACTGTCCAGCCATAGCCAGCTCCTGAGAATAGG...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGTCATCTACTGCTGGGTaGCAGGAACAAGTATACAAA +
Preference number: 4 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQSSTAG*QEQVYK
Trigger: TTTGTATACTTGTTCCTGCCACCCAGCAGTAGATGA...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCATTGGCAGAGCTGGTaGCCACACCAGATGGGAGTA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWHWQSW*PHQMGV
Trigger: TACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGAGAACATTGGCAGAGCTaGTGGCCACACCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSREHWQS*WPHQMG
Trigger: TCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTC...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
3UTR CAA 72 bp GCTTCCACTCTGAAAGGCAAAGGAATCACCTCGTGTTaGCTTCATCCCCTTAGCAGGATGAACGAAACGCCT +
Preference number: 4 (lower is better)
Translates to: ASTLKGKGITSC*LHPLSRMNETP
Trigger: AGGCGTTTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTTCAGAGTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCTGCTTGAATGACTCATaGAATGTCCCAAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSCLNDS*NVPKSS
Trigger: AGAAGACTTTGGGACATTTCATGAGTCATTCAAGCA...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGAGGATTCCTGTTGCCTaGCCCTGCTTGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWRIPVA*PCLISS
Trigger: TGAGGAGATCAAGCAGGGGCAGGCAACAGGAATCCT...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACCACTCCCCAATGCTCTaGTCCAGGCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDHSPML*SRLGTT
Trigger: AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTG...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGAGGGTGGCACATGGCTaGTCTTTCAATGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KLLRPEACLWYCDLWGVERVAHG*SFNVKP
Trigger: TGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCT...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACTGTGCACTGATCAACTaGACAACTTCAACAATTACT +
Preference number: 4 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDCALIN*TTSTIT
Trigger: AGTAATTGTTGAAGTTGTGCAGTTGATCAGTGCACA...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCCCAACCTCTTATCTaGTCGTCTTCTTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSSQPLI*SSSSQK
Trigger: CTTCTGTGAAGAAGACGACCAGATAAGAGGTTGGGA...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGAGATGTCCTGGCTGGATaGCGTGATAGAAGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRDVLAG*RDRSAR
Trigger: TCTCGCACTTCTATCACGCCATCCAGCCAGGACATC...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACTGCTGCAGGCAGGCCTaGTGCACGAAGTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDCCRQA*CTKWRL
Trigger: AAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCA...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATTCAGCTCAAGACCATaGGCAGGAACTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPFSSRP*AGTLLA
Trigger: AGCCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAA...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCACTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCGAGTGTCAATCCCGCTaGACACACATATTACAAAAT +
Preference number: 4 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCECQSR*THILQN
Trigger: ATTTTGTAATATGTGTGTCCAGCGGGATTGACACTC...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCACTGCCTTATACTCCCTaGGAGATCACAATAGTCAGT +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSLPYTP*EITIVS
Trigger: ACTGACTATTGTGATCTCCCAGGGAGTATAAGGCAG...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGCAGGCTTCAAGGCCTaGGCCCATTCTGAACCAAAG +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHAGFKA*AHSEPK
Trigger: CTTTGGTTCAGAATGGGCCCAGGCCTTGAAGCCTGC...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACTCCCTGCCAGCCCGCTaGAGGACTTGGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDSLPAR*RTWQCA
Trigger: TGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGA...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCAGCAGTACGGTCAATaGGCACATACAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWQQYGQ*AHTRTR
Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAACAATCAGACGTGAATaGTTTCTGCTCCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSTIRRE*FLLQCL
Trigger: AAGACACTGGAGCAGAAATCATTCACGTCTGATTGT...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCTGCTCTTTCAATGTaGAGCCAACACCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLAALSM*SQHQLE
Trigger: CTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGC...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGCAAAGACCAAATTGCTaGGGCCAGAAGCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: TAPKRTERASFPRLQEHWQRPNC*GQKPAY
Trigger: ATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTG...CCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGTCCTCTATTACAGATaGCAAACTCCATGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEVLYYR*QTPWGL
Trigger: GAGGCCCCATGGAGTTTGTCATCTGTAATAGAGGAC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGGCCTGGGCCCATTCTaGACCAAAGGAATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEGLGPF*TKGISL
Trigger: AAGAGAAATTCCTTTGGTTCAGAATGGGCCCAGGCC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGTCGCTGGACGTCATCTaGAACTTCTCCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: HSTQKNRESKFSKATGTLSLDVI*NFSHFL
Trigger: GAGAAAATGGGAGAAGTTGCAGATGACGTCCAGCGA...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACCTAGACACTCCCCAATaGTCTGCTCCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDLDTPQ*SAPGWG
Trigger: TCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAG...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGTTGCTCAGTGAATCATaGGCCACCACAGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLLLSES*ATTEHH
Trigger: ATGGTGCTCTGTGGTGGCGCATGATTCACTGAGCAA...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATTGCTCAGTGAATCATaGGCCACCACAGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPLLSES*ATTEHH
Trigger: ATGGTGCTCTGTGGTGGCGCATGATTCACTGAGCAA...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATTATCAAGGCACCTTTaGCATAGTGGGGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRLSRHL*HSGVPA
Trigger: AGCTGGCACCCCACTATGGCAAAGGTGCCTTGATAA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGATGGCATCCTGGGATaGAATGGCAGAGATCTGATG +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLDGILG*NGRDLM
Trigger: CATCAGATCTCTGCCATTCCATCCCAGGATGCCATC...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATCATCTCCTTCACAGTaGCAGATCCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRSSPSQ*QILQMS
Trigger: GGACATCTGCAGGATCTGCCACTGTGAAGGAGATGA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
CDS-3UTR CCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATTCTTCCTGCGCTCGCTaGACGTCATCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHSSCAR*TSSATS
Trigger: AGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGA...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLGIFSS*LDTPQC
Trigger: GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCC...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACCAGTCTGTGGTTGCCTaGGGTCCCCAGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDQSVVA*GPQAEK
Trigger: CTTCTCAGCCTGGGGACCCCAGGCAACCACAGACTG...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGGTGGCCACACCAGATaGGAGTACCACATCCCCACC +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDGGHTR*EYHIPT
Trigger: GGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGAACTGCAGATGTCCTaGCTGGATGGCGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLELQMS*LDGVIE
Trigger: TTCTATCACGCCATCCAGCCAGGACATCTGCAGTTC...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp GGCAGGAGTCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGAAACACAAGAATGTTTaGAATTGCCAAGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GRSLCLGVCFNTISWGSPKHKNV*NCQEVC
Trigger: ACAAACCTCTTGGCAATTCCAAACATTCTTGTGTTT...CGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGCTTAGAAATGTTGCTTaGATGACTCATGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQLRNVA*MTHEMS
Trigger: GGACATTTCATGAGTCATTCAAGCAACATTTCTAAG...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACATGTCACTGAGCACATaGTCTTCCTGCGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDMSLST*SSCARW
Trigger: CCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACAT...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAAGAAGTCCTCCGGTaGAGCCGATGGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGKEVLR*SRWPQP
Trigger: TGGTTGTGGCCATCGGCTTCACCGGAGGACTTCTTT...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGAGTTTGTGTCGGAATaGCAGATTCCATATCCATGT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSEFVSE*QIPYPC
Trigger: ACATGGATATGGAATCTGTCATTCCGACACAAACTC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATCTGATGCAGTGGCATaGTCATCCCAACCTCTTATC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRSDAVA*SSQPLI
Trigger: GATAAGAGGTTGGGATGAGCATGCCACTGCATCAGA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR GCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATCGCTGGACGTCATCTaGAACTTCTCCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRSLDVI*NFSHFL
Trigger: GAGAAAATGGGAGAAGTTGCAGATGACGTCCAGCGA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGACCTGTTGCCTGCCCCTaGTTGATCTCCTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGPVACP*LISSAV
Trigger: TACTGCTGAGGAGATCAAGCAGGGGCAGGCAACAGG...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGACATGGGCAGGAACTCTaGTGGCTCCCCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGHGQEL*WLPMMS
Trigger: TGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATG...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAAAAAGCCTCTGGCCTaGTTGTCCTGTCTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSKKPLA*LSCLKS
Trigger: ACTTTTAAGACAGGACAAGCAGGCCAGAGGCTTTTT...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGATGCAAGGGAGAACCTaGATGCAGTGCACACACCCC +
Preference number: 4 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKMQGRT*MQCTHP
Trigger: GGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCAT...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGTGGAAAGGAAGCATCTaGGCTACATTGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLWKGSI*ATLCFR
Trigger: CCTGAAGCACAATGTAGCGCAGATGCTTCCTTTCCA...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGCCCCACCAGGCTTCATaGTTCACTGCTAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKPHQAS*FTARCR
Trigger: CCTGCATCTAGCAGTGAAGCATGAAGCCTGGTGGGG...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCTGAGGCCAGAAGCCTaGTTATGGTACTGTGACTTA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWLRPEA*LWYCDL
Trigger: TAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGAATCTTCTCGTCATaGCTAGACACTCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHGIFSS*LDTPQC
Trigger: GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCC...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGAGCAGGAGTCTGTGTTTaGGGGTCTGTTTCAATACCA +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRAGVCV*GSVSIP
Trigger: TGGTATTGAAACAGACCCCCAAACACAGACTCCTGC...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGCAGGAGTCTGTGTTTaGGGGTCTGTTTCAATACCA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWAGVCV*GSVSIP
Trigger: TGGTATTGAAACAGACCCCCAAACACAGACTCCTGC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACAGTGAGAACAGGTACTaGAGCAGTTGCCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDSENRY*SSCRLR
Trigger: CCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACT...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGGAATGGCAGAGATCTaGTGCAGTGGCATGCTCATC +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDGMAEI*CSGMLI
Trigger: GATGAGCATGCCACTGCATCAGATCTCTGCCATTCC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCTTAGAAATGTTGCTTaGATGACTCATGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSLRNVA*MTHEMS
Trigger: GGACATTTCATGAGTCATTCAAGCAACATTTCTAAG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAGACGTGGAATGTCACTaGGCACATGATCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGDVECH*AHDLPA
Trigger: CGCAGGAAGATCATGTGCTCAGTGACATTCCACGTC...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGGAGTTTGTGTCGGAATaGCAGATTCCATATCCATGT +
Preference number: 4 (lower is better)
Translates to: HSTQKNRESKFSKATGTLEFVSE*QIPYPC
Trigger: ACATGGATATGGAATCTGTCATTCCGACACAAACTC...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGTGCTGTTTGCTCAGTaGATCATGCGCCACCACAGA +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDVLFAQ*IMRHHR
Trigger: TCTGTGGTGGCGCATGATTCACTGAGCAAACAGCAC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGGTGCTGTTTGCTCAGTaGATCATGCGCCACCACAGA +
Preference number: 4 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKVLFAQ*IMRHHR
Trigger: TCTGTGGTGGCGCATGATTCACTGAGCAAACAGCAC...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATTCGCTGGACGTCATCTaGAACTTCTCCCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHSLDVI*NFSHFL
Trigger: GAGAAAATGGGAGAAGTTGCAGATGACGTCCAGCGA...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACAGGATTCCTGTTGCCTaGCCCTGCTTGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDRIPVA*PCLISS
Trigger: TGAGGAGATCAAGCAGGGGCAGGCAACAGGAATCCT...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGAGAACCTGCATGCAGTaGACACACCCCGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQRTCMQ*THPGQG
Trigger: ACCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCT...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGGCTAGAGACAGAAGCTaGATGTTTCAAACCAGATTC +
Preference number: 4 (lower is better)
Translates to: KLLRPEACLWYCDLWGVEARDRS*MFQTRF
Trigger: GAATCTGGTTTGAAACATGCAGCTTCTGTCTCTAGC...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGGAAGCCCATACTCCCTaGCAGCCCGCTGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQEAHTP*QPAGGL
Trigger: AAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTC...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGTCCCAACCTCTTATCTaGTCGTCTTCTTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLSQPLI*SSSSQK
Trigger: CTTCTGTGAAGAAGACGACCAGATAAGAGGTTGGGA...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGCAGAGATGGCATCCTaGGATGGAATGGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDAEMAS*DGMAEI
Trigger: GATCTCTGCCATTCCATCCCAGGATGCCATCTCTGC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGATGTCCTGGCTGGATaGCGTGATAGAAGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDDVLAG*RDRSAR
Trigger: TCTCGCACTTCTATCACGCCATCCAGCCAGGACATC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGGGCAGGAACTCTGCTaGCTCCCCATGATGTCATCA +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDGQELC*LPMMSS
Trigger: TGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACTCCTCCTCTTCCCTTaGGATTGGCATTTTATTCTC +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRLLLFP*DWHFIL
Trigger: GAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCACTGCCTTATACTCCCTaGGAGATCACAATAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPLPYTP*EITIVS
Trigger: ACTGACTATTGTGATCTCCCAGGGAGTATAAGGCAG...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGAAATGTTGCTTGAATaGCTCATGAAATGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSEMLLE*LMKCPK
Trigger: TTTGGGACATTTCATGAGTCATTCAAGCAACATTTC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACCAGCAGTACGGTCAATaGGCACATACAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDQQYGQ*AHTRTR
Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTG...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGACAATCAGACGTGAATaGTTTCTGCTCCAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLTIRRE*FLLQCL
Trigger: AAGACACTGGAGCAGAAATCATTCACGTCTGATTGT...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGAAATACTTGGTCAAACTaGCGATATCCACAGCCCTAT +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRNTWSN*RYPQPY
Trigger: ATAGGGCTGTGGATATCGTCAGTTTGACCAAGTATT...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR GCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGATTGCTCAGTGAATCATaGGCCACCACAGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGLLSES*ATTEHH
Trigger: ATGGTGCTCTGTGGTGGCGCATGATTCACTGAGCAA...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGAGTCATTTTGGGCCATaGATTTCAAGCTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: KLLRPEACLWYCDLWGVESHFGP*ISSYAF
Trigger: GAAAGCATAGCTTGAAATCCATGGCCCAAAATGACT...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACTGGTAGAGTCATTTTaGGCCATGGATTTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRLVESF*AMDFKL
Trigger: TAGCTTGAAATCCATGGCCCAAAATGACTCTACCAG...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAATCCTGCAGATGTCCTaGCTGGATGGCGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGILQMS*LDGVIE
Trigger: TTCTATCACGCCATCCAGCCAGGACATCTGCAGGAT...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACCCCATGATGTCATCATaGGGTCTTCCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDPMMSS*GLPLSH
Trigger: GTGGGAAAGTGGAAGACCCCATGATGACATCATGGG...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGTCATCTACTGCTGGGTaGCAGGAACAAGTATACAAA +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLSSTAG*QEQVYK
Trigger: TTTGTATACTTGTTCCTGCCACCCAGCAGTAGATGA...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGTCTACAGGAAGTCTTaGTGCTTTTCAAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLVYRKS*CFSSSA
Trigger: TGCTGAACTTGAAAAGCACCAAGACTTCCTGTAGAC...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGAGACATCCCCTGACGTaGACACGGGAGATATGGGGG +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQRHPLT*TREIWG
Trigger: CCCCCATATCTCCCGTGTCCACGTCAGGGGATGTCT...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACTCATCTCCTTCACAGTaGCAGATCCTGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDSSPSQ*QILQTS
Trigger: GGATGTCTGCAGGATCTGCCACTGTGAAGGAGATGA...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGATCCCCTTAGCAGGATaGACGAAACGCCTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQIPLAG*TKRLRP
Trigger: GGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGAT...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACAGAGAACTCTGGCAGTaGGGAGCTTTCGAGACAACA +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDRELWQ*GAFETT
Trigger: TGTTGTCTCGAAAGCTCCTCACTGCCAGAGTTCTCT...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR GCA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATTATGGGTCAACCAAATaGCATCCTTTCACTAAACCC +
Preference number: 4 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHYGSTK*HPFTKP
Trigger: GGGTTTAGTGAAAGGATGGCATTTGGTTGACCCATA...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGAGTGTCAATCCCGCTaGACACACATATTACAAAAT +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWECQSR*THILQN
Trigger: ATTTTGTAATATGTGTGTCCAGCGGGATTGACACTC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CCA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGAGTGTCAATCCCGCTaGACACACATATTACAAAAT +
Preference number: 4 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEECQSR*THILQN
Trigger: ATTTTGTAATATGTGTGTCCAGCGGGATTGACACTC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGAAATGTTGCTTGAATaGCTCATGAAATGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWEMLLE*LMKCPK
Trigger: TTTGGGACATTTCATGAGTCATTCAAGCAACATTTC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
CDS-3UTR TCA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAGGGGTTCCATATGTaGAGTGGGGATTCACACTTA +
Preference number: 4 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGKGFHM*SGDSHL
Trigger: TAAGTGTGAATCCCCACTTCACATATGGAACCCCTT...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGATCCTTCAGCCTCCTaGCCTTCAAAACAAACTCCA +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDDPSAS*PSKQTP
Trigger: TGGAGTTTGTTTTGAAGGCCAGGAGGCTGAAGGATC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCAGTTCCATATGTGAAGTaGGGATTCACACTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPVPYVK*GFTLRK
Trigger: TTTTCTAAGTGTGAATCCCCACTTCACATATGGAAC...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGTGGACACGGGAGATATaGGGGGTAATTTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKWTREI*GVIFQR
Trigger: TCTCTGAAAAATTACCCCCCATATCTCCCGTGTCCA...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR TCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGAGTTTGTGTCGGAATaGCAGATTCCATATCCATGT +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDEFVSE*QIPYPC
Trigger: ACATGGATATGGAATCTGTCATTCCGACACAAACTC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR TCA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGCATCTAACTGTGCACTaGTCAACTGCACAACTTCAA +
Preference number: 4 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKHLTVH*STAQLQ
Trigger: TTGAAGTTGTGCAGTTGATCAGTGCACAGTTAGATG...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACATAGGCAAAACTTTCTaGAGTATCCTGCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FKTESTSIVYLPSATSRDIGKTF*SILRLL
Trigger: GAGAAGGCGCAGGATACTTCAGAAAGTTTTGCCTAT...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGGATGGCATCCTGGGATaGAATGGCAGAGATCTGATG +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQDGILG*NGRDLM
Trigger: CATCAGATCTCTGCCATTCCATCCCAGGATGCCATC...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGTTTATTTTCAAAGTTaGGCTCTGTTAGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: IGILFSHSAQDHGQELCWVYFQS*ALLVEI
Trigger: AATCTCCACTAACAGAGCCCAACTTTGAAAATAAAC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGGAATCACCTCGTGTTTaGTTCATCCCCTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQESPRV*FIPLAG
Trigger: TCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTC...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR TCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGAAGGGGTTCCATATGTaGAGTGGGGATTCACACTTA +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQKGFHM*SGDSHL
Trigger: TAAGTGTGAATCCCCACTTCACATATGGAACCCCTT...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR GCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGTCCATTTTACAGATGTaGACACTCAGGCCAAAGACG +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQSILQM*TLRPKT
Trigger: CGTCTTTGGCCTGAGTGTGCACATCTGTAAAATGGA...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR GCA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGCTTCAATTGTGTATTTaGCTTCAGCCACATCCAGAG +
Preference number: 4 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQLQLCI*LQPHPE
Trigger: CTCTGGATGTGGCTGAAGGCAAATACACAATTGAAG...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CCA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACGTTTATTTTCAAAGTTaGGCTCTGTTAGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDVYFQS*ALLVEI
Trigger: AATCTCCACTAACAGAGCCCAACTTTGAAAATAAAC...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS CCA 90 bp TCTCCGCGGGCTCCACGCCGGGCCCGCAGCGCAGGGATGGGTCCTTaGCGGCCGCCCCCACCCAGCCCAGCCCAGCCCAGCCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SPRAPRRARSAGMGP*RPPPPSPAQPSPAQ
Trigger: CTGGGCTGGGCTGGGCTGGGCTGGGCTGGGTGGGGGCGGCCGCCAAGGACCCATCCCTGCGCTGCGGGCCCGGCGTGGAGCCCGCGGAGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS GCA 90 bp AGACGCGAGCACCGGGGCAGAGAGACCCACTGCCTGGAGTCGCGCTaGCTCTCCGCGGGCTCCACGCCGGGCCCGCAGCGCAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: RREHRGRETHCLESR*LSAGSTPGPQRRDG
Trigger: CCCATCCCTGCGCTGCGGGCCCGGCGTGGAGCCCGCGGAGAGGCAGCGCGACTCCAGGCAGTGGGTCTCTCTGCCCCGGTGCTCGCGTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000451376.1
CDS CCA 90 bp GGCGGCCGGCCTAGAGCCCTGGGCGCTGACCGTTTCTGCGATTCCTaGTTCCGCTCGGCCCGGCCCCAGGGGCAGACGCGAGCACCGGGG +
Preference number: 5 (lower is better)
Translates to: GGRPRALGADRFCDS*FRSARPQGQTRAPG
Trigger: CCCCGGTGCTCGCGTCTGCCCCTGGGGCCGGGCCGAGCGGAACCAGGAATCGCAGAAACGGTCAGCGCCCAGGGCTCTAGGCCGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000602712.2
CDS GCA 90 bp TGGGCTCTGAGCTGGCGGCGCTACCGCCCTGGCCCGCCTCGAGCATaGCCGAGACGTGGACGCAGCAAGGCCGCACCTCCCCCAGCGCGT +
Preference number: 5 (lower is better)
Translates to: WALSWRRYRPGPPRA*PRRGRSKAAPPPAR
Trigger: ACGCGCTGGGGGAGGTGCGGCCTTGCTGCGTCCACGTCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 90 bp CTGGCGGCGCTACCGCCCTGGCCCGCCTCGAGCATGCCCGAGACGTaGACGCAGCAAGGCCGCACCTCCCCCAGCGCGTCGCCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: LAALPPWPASSMPET*TQQGRTSPSASPVY
Trigger: GTAAACAGGCGACGCGCTGGGGGAGGTGCGGCCTTGCTGCGTCCACGTCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 90 bp TCGGCCGCCCTTATTGGCGGCCAGCGGCGGCGGCTGCGCGCGGCGTaGGGGACTCCGATCCTAGAGGCCGCAGGAGTTACCTCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SAALIGGQRRRLRAA*GTPILEAAGVTSGG
Trigger: CCCACCTGAGGTAACTCCTGCGGCCTCTAGGATCGGAGTCCCCCACGCCGCGCGCAGCCGCCGCCGCTGGCCGCCAATAAGGGCGGCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 90 bp CAGGAGTTACCTCAGGTGGGCTCTGAGCTGGCGGCGCTACCGCCCTaGCCCGCCTCGAGCATGCCCGAGACGTGGACGCAGCAAGGCCGC +
Preference number: 5 (lower is better)
Translates to: QELPQVGSELAALPP*PASSMPETWTQQGR
Trigger: GCGGCCTTGCTGCGTCCACGTCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 90 bp GGCGTGGGGGACTCCGATCCTAGAGGCCGCAGGAGTTACCTCAGGTaGGCTCTGAGCTGGCGGCGCTACCGCCCTGGCCCGCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: GVGDSDPRGRRSYLR*ALSWRRYRPGPPRA
Trigger: TGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCTGCGGCCTCTAGGATCGGAGTCCCCCACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS TCA 90 bp GGGACTCCGATCCTAGAGGCCGCAGGAGTTACCTCAGGTGGGCTCTaGGCTGGCGGCGCTACCGCCCTGGCCCGCCTCGAGCATGCCCGA +
Preference number: 5 (lower is better)
Translates to: GTPILEAAGVTSGGL*AGGATALARLEHAR
Trigger: TCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCTGCGGCCTCTAGGATCGGAGTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 90 bp TCCGATCCTAGAGGCCGCAGGAGTTACCTCAGGTGGGCTCTGAGCTaGCGGCGCTACCGCCCTGGCCCGCCTCGAGCATGCCCGAGACGT +
Preference number: 5 (lower is better)
Translates to: SDPRGRRSYLRWALS*RRYRPGPPRACPRR
Trigger: ACGTCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCTGCGGCCTCTAGGATCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 90 bp GCGAGAGTGAGAACAGGTACTGGAGCAGTTGCCGGCTTCGGGACGTaGCCTCACCATCCGCCTTCTCTTCCAGCAGCAGGCCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ARVRTGTGAVAGFGT*PHHPPSLPAAGRAC
Trigger: GCAGGCCCGGCCTGCTGCTGGAAGAGAAGGCGGATGGTGAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS-3UTR CAA 90 bp GAGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGGGGTGCCAGCTACATaGGGTGGGATGCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: EHHGSTCSRAWRRQHRQRGVPAT*GGMPRG
Trigger: GCCCCTGGGCATCCCACCCAATGTAGCTGGCACCCC...CCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS GCA 90 bp CAGCGCGTGTCGGAGCTCTTGATCCACTGCTGCAGGCAGGCCTGGTaGACGAAGTGGAGGCTTCCTGTGCAGTGGCAGGGGGTGATCAGG +
Preference number: 5 (lower is better)
Translates to: QRVSELLIHCCRQAW*TKWRLPVQWQGVIR
Trigger: CCTGATCACCCCCTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000602712.2
ENST00000613420.1
ENST00000616143.4
CDS GCA 90 bp CAGAAGCCCATACTCCCTGCCAGCCCGCTGGAGGACTTGGCAGTGTaGAGGCGAGCAGCGCAGCTCTCCAGCTCATGGAACCTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: QKPILPASPLEDLAV*RRAAQLSSSWNLCR
Trigger: CCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 90 bp CAGCAGCGCGTGTCGGAGCTCTTGATCCACTGCTGCAGGCAGGCCTaGTGCACGAAGTGGAGGCTTCCTGTGCAGTGGCAGGGGGTGATC +
Preference number: 5 (lower is better)
Translates to: QQRVSELLIHCCRQA*CTKWRLPVQWQGVI
Trigger: GATCACCCCCTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGCGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000602712.2
ENST00000613420.1
ENST00000616143.4
CDS CCA 90 bp TGCAGGCTGCTGGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTACTaGAGCAGTTGCCGGCTTCGGGACGTGGCCTCACCATCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: CRLLALKPCESENRY*SSCRLRDVASPSAF
Trigger: GAAGGCGGATGGTGAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 90 bp GAGGACTTGGCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGCTCATaGAACCTGTGCAGGCTGCTGGCGCTCAAGCCGTGCGAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: EDLAVCRRAAQLSSS*NLCRLLALKPCESE
Trigger: CTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 90 bp CGTCAGAGCAGAAGCCCATACTCCCTGCCAGCCCGCTGGAGGACTTaGCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGCTCATGGAACC +
Preference number: 5 (lower is better)
Translates to: RQSRSPYSLPARWRT*QCAGEQRSSPAHGT
Trigger: GGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTGCTCTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 90 bp CTCCCATCTCGTCAGAGCAGAAGCCCATACTCCCTGCCAGCCCGCTaGAGGACTTGGCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LPSRQSRSPYSLPAR*RTWQCAGEQRSSPA
Trigger: AGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTGCTCTGACGAGATGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS TCA 90 bp CTCATGGAACCTGTGCAGGCTGCTGGCGCTCAAGCCGTGCGAGAGTaGGAACAGGTACTGGAGCAGTTGCCGGCTTCGGGACGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: LMEPVQAAGAQAVRE*EQVLEQLPASGRGL
Trigger: GAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 90 bp CTGGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTACTGGAGCAGTTaGCGGCTTCGGGACGTGGCCTCACCATCCGCCTTCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LALKPCESENRYWSS*RLRDVASPSAFSSS
Trigger: GCTGGAAGAGAAGGCGGATGGTGAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 90 bp GCAGGCGAGCAGCGCAGCTCTCCAGCTCATGGAACCTGTGCAGGCTaGTGGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: AGEQRSSPAHGTCAG*WRSSRARVRTGTGA
Trigger: TGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 90 bp GCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGCTCATGGAACCTGTaGAGGCTGCTGGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTAC +
Preference number: 5 (lower is better)
Translates to: AVCRRAAQLSSSWNL*RLLALKPCESENRY
Trigger: GTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 90 bp GACATCGTCGTCTCCCATCTCGTCAGAGCAGAAGCCCATACTCCCTaGCAGCCCGCTGGAGGACTTGGCAGTGTGCAGGCGAGCAGCGCA +
Preference number: 5 (lower is better)
Translates to: DIVVSHLVRAEAHTP*QPAGGLGSVQASSA
Trigger: TGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTGCTCTGACGAGATGGGAGACGACGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS-3UTR CAA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGCGCAGGGATGGGTCCTaGGCGGCCGCCCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQRRDGS*AAAPTQ
Trigger: CTGGGTGGGGGCGGCCGCCAAGGACCCATCCCTGCG...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS GCA 90 bp CTCTCCAGCTCATGGAACCTGTGCAGGCTGCTGGCGCTCAAGCCGTaGGAGAGTGAGAACAGGTACTGGAGCAGTTGCCGGCTTCGGGAC +
Preference number: 5 (lower is better)
Translates to: LSSSWNLCRLLALKP*ESENRYWSSCRLRD
Trigger: GTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 90 bp GGCGAGCAGCGCAGCTCTCCAGCTCATGGAACCTGTGCAGGCTGCTaGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTACTGGAGCAGTT +
Preference number: 5 (lower is better)
Translates to: GEQRSSPAHGTCAGC*RSSRARVRTGTGAV
Trigger: AACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS-3UTR CAA 90 bp CCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACACCCCGGCCAGGGGTGGATCTCACCCGGTaGGTCCCAGCCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PILHARENLHAVHTPRPGVDLTR*VPALLQ
Trigger: TTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCAC...CCCTGGCCGGGGTGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCGTTGCCTGCCCCTGCTaGATCTCCTCAGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPIVACPC*ISSAVR
Trigger: CCGTACTGCTGAGGAGATCAAGCAGGGGCAGGCAAC...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTCGCGTGTCGGAGCTCTaGATCCACTGCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVRVSEL*IHCCRQ
Trigger: CTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGCG...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTACAAAACCAGGGGCCTaGCCTGGGCAGTTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPTKPGA*PGQFLR
Trigger: CCTTAGGAACTGCCCAGGCAAGGCCCCTGGTTTTGT...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CAGAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCGGCACAAAGACCAAATaGCTGAGGCCAGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QSWWPHQMGVPHPHQASCGTKTK*LRPEAC
Trigger: GCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCC...GCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGGTGGATCTCACCCGGTaGGTCCCAGCCCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQVDLTR*VPALLQ
Trigger: TTGGAGAAGGGCTGGGACCAACCGGGTGAGATCCAC...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS GCA 90 bp TTCCGTGGAGCAGAGGGGCGCCCGCAGAACCCTACTCTTCAGTTTTaGAGATGTGCTGTCCTCAAAGACATCGTCGTCTCCCATCTCGTC +
Preference number: 5 (lower is better)
Translates to: FRGAEGRPQNPTLQF*RCAVLKDIVVSHLV
Trigger: GACGAGATGGGAGACGACGATGTCTTTGAGGACAGCACATCTGCAAAACTGAAGAGTAGGGTTCTGCGGGCGCCCCTCTGCTCCACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS-3UTR CAA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGATGATGAACTCATACTaGCAGAGCTCGCAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGMMNSY*QSSQQR
Trigger: GCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCAT...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACGGCAGGAGTCTGTGTTaGGGGGTCTGTTTCAATACC +
Preference number: 5 (lower is better)
Translates to: QWASTHLACKGEPACSAHGRSLC*GVCFNT
Trigger: GGTATTGAAACAGACCCCCAAACACAGACTCCTGCC...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGTCTGTAAAGTGCTGTTaGCTCAGTGAATCATGCGCC +
Preference number: 5 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGSVKCC*LSESCA
Trigger: GGCGCATGATTCACTGAGCAAACAGCACTTTACAGA...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTGGAATCACCTCGTGTTaGCTTCATCCCCTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLGITSC*LHPLSR
Trigger: CCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCC...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AGCACCATGGCTCCACCTGCTCAAGAGCATGGAGGAGGCAGCATCGGCAGAGGGAGACTAAGACCTGTGTaGCCAAGGAATCAGACACTG +
Preference number: 5 (lower is better)
Translates to: STMAPPAQEHGGGSIGRGRLRPV*PRNQTL
Trigger: CAGTGTCTGATTCCTTGGCAACACAGGTCTTAGTCT...CCCTCTGCCGATGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS GCA 90 bp GAAGGTCCTCACGGATCACTAGTCCGAGCTTCCATTTTACAGATGTaGACACTCAGGCCAAAGACGACGGCTGACGGGCCAACGTCTCAC +
Preference number: 5 (lower is better)
Translates to: EGPHGSLVRASILQM*TLRPKTTADGPTSH
Trigger: GTGAGACGTTGGCCCGTCAGCCGTCGTCTTTGGCCTGAGTGTGCACATCTGTAAAATGGAAGCTCGGACTAGTGATCCGTGAGGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000453980.3
ENST00000602712.2
CDS GCA 90 bp AGCAGAGGGGCGCCCGCAGAACCCTACTCTTCAGTTTTGCAGATGTaGTGTCCTCAAAGACATCGTCGTCTCCCATCTCGTCAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SRGAPAEPYSSVLQM*CPQRHRRLPSRQSR
Trigger: TCTGCTCTGACGAGATGGGAGACGACGATGTCTTTGAGGACAGCACATCTGCAAAACTGAAGAGTAGGGTTCTGCGGGCGCCCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS-3UTR CAA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACATGATGAACTCATACTaGCAGAGCTCGCAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDMMNSY*QSSQQR
Trigger: GCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCAT...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTACTCCATGGGGCCTCTaGGAATACTTGGTCAAACTG +
Preference number: 5 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTTPWGL*EYLVKL
Trigger: CAGTTTGACCAAGTATTCCAAGAGGCCCCATGGAGT...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CAA 90 bp GTGACTCCACAGAACTTCCCCGAGCAGAAGCCTCACAGTGGGCCAGCACCCATCACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: VTPQNFPEQKPHSGPAPITGRVI*GHGFQA
Trigger: AGCTTGAAATCCATGGCCCAAAATGACTCTACCAGT...GATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGAAGTTCTGTGGAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGTTGCCTGCCCCTGCTaGATCTCCTCAGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSVACPC*ISSAVR
Trigger: CCGTACTGCTGAGGAGATCAAGCAGGGGCAGGCAAC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTCCCGGAGGTAACTATTaGCCTGGAAAACTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPPGGNY*PGKLGN
Trigger: GTTTCCTAGTTTTCCAGGCAAATAGTTACCTCCGGG...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp GGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGAAGAATGTGTGTGGATaGTCCACAGTGAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: GNLLVMARHSPMLCSRLGKNVCG*STVRPE
Trigger: TTCTGGCCTCACTGTGGACAATCCACACACATTCTT...CCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTAAGAATGTGTGTGGATaGTCCACAGTGAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLKNVCG*STVRPE
Trigger: TTCTGGCCTCACTGTGGACAATCCACACACATTCTT...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGAGCCCGCTGGAGGACTaGGCAGTGTGCAGGCGAGCA +
Preference number: 5 (lower is better)
Translates to: IGILFSHSAQDHGQELCWSPLED*AVCRRA
Trigger: TGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCT...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS TCA 90 bp GATCTGAGACACCAGCTTTCTGGGGGTCACTGGTTTCAGGAAGGGTaGAGCATCCCTTCCTCCCACGTACTTTTCTCAGTGGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: DLRHQLSGGHWFQEG*SIPSSHVLFSVASA
Trigger: AGCTGAAGCCACTGAGAAAAGTACGTGGGAGGAAGGGATGCTTCACCCTTCCTGAAACCAGTGACCCCCAGAAAGCTGGTGTCTCAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602712.2
CDS-3UTR CAA 90 bp CTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCACGCGTGTCGGAGCTCTaGATCCACTGCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLLFPWDWHFILSFSSRPRVSEL*IHCCRQ
Trigger: CTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGCG...TGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACGGCCTCTTGGAATACTaGGTCAAACTGACGATATCC +
Preference number: 5 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDGLLEY*VKLTIS
Trigger: GGATATCGTCAGTTTGACCAAGTATTCCAAGAGGCC...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CAA 90 bp CAGTGGGCCAGCACCCATCTTGCATGCAAGGGAGAACCTGCATGCAGTGCACACAGTGTTCTTCTGGCTTaGGTATTCTTAGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: QWASTHLACKGEPACSAHSVLLA*VFLAGF
Trigger: GAAGCCTGCTAAGAATACCAAAGCCAGAAGAACACT...GTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp TCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATCGCGTGTCGGAGCTCTaGATCCACTGCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSSSLGIGILFSHSAQDHRVSEL*IHCCRQ
Trigger: CTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGCG...ATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGTTGCCTGCCCCTGCTaGATCTCCTCAGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLVACPC*ISSAVR
Trigger: CCGTACTGCTGAGGAGATCAAGCAGGGGCAGGCAAC...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCTCTGTAAAGTGCTGTTaGCTCAGTGAATCATGCGCC +
Preference number: 5 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSSVKCC*LSESCA
Trigger: GGCGCATGATTCACTGAGCAAACAGCACTTTACAGA...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATTTGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCAAGCCTCTGGCCTGCTaGTCCTGTCTTAAAAGTCAT +
Preference number: 5 (lower is better)
Translates to: ICLQPHPETCGSHPVGPSKPLAC*SCLKSH
Trigger: ATGACTTTTAAGACAGGACAAGCAGGCCAGAGGCTT...GCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTTCTATATGGGTCAGGAATCACCTCGTGTTaGCTTCATCCCCTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: QIPGLLALRPHSGFLYGSGITSC*LHPLSR
Trigger: CCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCC...TGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGAGACTAAGACCTGTGTaGCCAAGGAATCAGACACTG +
Preference number: 5 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQRLRPV*PRNQTL
Trigger: CAGTGTCTGATTCCTTGGCAACACAGGTCTTAGTCT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACTGTCTACAGGAAGTCTaGGTGCTTTTCAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PSPGVRRDAEGIFSSWLDCLQEV*VLFKFS
Trigger: GCTGAACTTGAAAAGCACCAAGACTTCCTGTAGACA...GTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CTTCTCGTCATGGCTAGACACTCCCCAATGCTCTGCTCCAGGCTGGGGACCACTTACCTAAGCACTTTCTaGTCTACAGGAAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LLVMARHSPMLCSRLGTTYLSTF*STGSLG
Trigger: ACCAAGACTTCCTGTAGACAAGAAAGTGCTTAGGTA...AGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGGCACAAAGACCAAATaGCTGAGGCCAGAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSGTKTK*LRPEAC
Trigger: GCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGACTCCATGGGGCCTCTaGGAATACTTGGTCAAACTG +
Preference number: 5 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQTPWGL*EYLVKL
Trigger: CAGTTTGACCAAGTATTCCAAGAGGCCCCATGGAGT...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp GAGCTGGTGGCCACACCAGATGGGAGTACCACATCCCCACCAGGCTTCATGCTTCAAAGGAATTTCTCTTaGACGCCTGTAATGTGTCCT +
Preference number: 5 (lower is better)
Translates to: ELVATPDGSTTSPPGFMLQRNFS*TPVMCP
Trigger: AGGACACATTACAGGCGTCAAAGAGAAATTCCTTTG...AAGCATGAAGCCTGGTGGGGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAGGCAGGAGTCTGTGTTaGGGGGTCTGTTTCAATACC +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSGRSLC*GVCFNT
Trigger: GGTATTGAAACAGACCCCCAAACACAGACTCCTGCC...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGTCTGTAAAGTGCTGTTaGCTCAGTGAATCATGCGCC +
Preference number: 5 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQSVKCC*LSESCA
Trigger: GGCGCATGATTCACTGAGCAAACAGCACTTTACAGA...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAGCGGACCCTGGCAGTTaGCTCACACCTGGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGADPGS*LTPGPR
Trigger: ACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGC...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGGGGTGCCAGCTACATaGGGTGGGATGCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDGVPAT*GGMPRG
Trigger: GCCCCTGGGCATCCCACCCAATGTAGCTGGCACCCC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGAGCCACATCCAGAGACTaGTGGATCTCACCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRATSRD*WISPGW
Trigger: CCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGC...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGCCACATCCAGAGACTaGTGGATCTCACCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: IGILFSHSAQDHGQELCWATSRD*WISPGW
Trigger: CCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATGATGTCATCATGGGGTCTTCCACTTTCCCACAGAGCTGCCAGGCAGAGGCAGACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: MMSSWGLPLSHRAARQRQTGRVI*GHGFQV
Trigger: CACTTGAAATCCATGGCCCAAAATGACTCTACCAGT...CTGCCTCTGCCTGGCAGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CAA 90 bp GTTCGCCGTGATGCAGAGGGAATCTTCTCGTCATGGCTAGACACTCCCCAATGCTTCTCACCCACATCATaGAGGGACCTTGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: VRRDAEGIFSSWLDTPQCFSPTS*RDLENF
Trigger: AAAGTTCTCAAGGTCCCTCAATGATGTGGGTGAGAA...GCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTCTGCATCACGGCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp CTTCCCTGGCCTACAAATACCAGGCCTCCTGGCCCTGAGACCTCATTCTGGGTTCAAGAATGTTTGGAATaGCCAAGAGGTTTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LPWPTNTRPPGPETSFWVQECLE*PRGLWF
Trigger: GAACCACAAACCTCTTGGCAATTCCAAACATTCTTG...AACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS GCA 90 bp AGATGGCATCCTGGGATGGAATGGCAGAGATCTGATGCAGTGGCATaGTCATCCCAACCTCTTATCTGGTCGTCTTCTTCACAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: RWHPGMEWQRSDAVA*SSQPLIWSSSSQKR
Trigger: TCTCTTCTGTGAAGAAGACGACCAGATAAGAGGTTGGGATGAGCATGCCACTGCATCAGATCTCTGCCATTCCATCCCAGGATGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
ENST00000453980.3
ENST00000602712.2
CDS-3UTR CAA 90 bp CACAGCACCCAAAAGAACCGAGAGAGCAAGTTTTCCAAGGCTACAGGAACATTGATGATGAACTCATACTaGCAGAGCTCGCAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: HSTQKNRESKFSKATGTLMMNSY*QSSQQR
Trigger: GCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCAT...CAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTCGGTTCTTTTGGGTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGCGGACCCTGGCAGTTaGCTCACACCTGGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDADPGS*LTPGPR
Trigger: ACGAGGGCCAGGTGTGAGCAAACTGCCAGGGTCCGC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TGCCTTCAGCCACATCCAGAGACTTGTGGATCTCACCCGGTTGGTCCCAGCCCTATTCTCACAATAAACTaGGGCACAAAGACCAAATTG +
Preference number: 5 (lower is better)
Translates to: CLQPHPETCGSHPVGPSPILTIN*GTKTKL
Trigger: CAATTTGGTCTTTGTGCCCAAGTTTATTGTGAGAAT...AGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGCCACCTCTGAGGCAGTaGAGCGACCGGCAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKPPLRQ*SDRQKG
Trigger: GCCTTTCTGCCGGTCGCTCAACTGCCTCAGAGGTGG...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGCCCTACTCTTCAGTTTaGCAGATGTGCTGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSPYSSV*QMCCPQ
Trigger: TTGAGGACAGCACATCTGCAAAACTGAAGAGTAGGG...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS CCA 90 bp TGGCAGAGATCTGATGCAGTGGCATGCTCATCCCAACCTCTTATCTaGTCGTCTTCTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATT +
Preference number: 5 (lower is better)
Translates to: WQRSDAVACSSQPLI*SSSSQKRVSTGRVI
Trigger: AATGACTCTACCAGTGGAGACTCTCTTCTGTGAAGAAGACGACCAGATAAGAGGTTGGGATGAGCATGCCACTGCATCAGATCTCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
ENST00000453980.3
ENST00000602712.2
CDS-3UTR CAA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAGTTGCCTGCCCCTGCTaGATCTCCTCAGCAGTACGG +
Preference number: 5 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGVACPC*ISSAVR
Trigger: CCGTACTGCTGAGGAGATCAAGCAGGGGCAGGCAAC...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TCTGTGTTTGGGGGTCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGCCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 5 (lower is better)
Translates to: SVFGGLFQYHLLGFAVMQPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...CTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGCCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 5 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGGGCAGGAGTCTGTGTTaGGGGGTCTGTTTCAATACC +
Preference number: 5 (lower is better)
Translates to: IGILFSHSAQDHGQELCWGRSLC*GVCFNT
Trigger: GGTATTGAAACAGACCCCCAAACACAGACTCCTGCC...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGGCAGGAGTCTGTGTTaGGGGGTCTGTTTCAATACC +
Preference number: 5 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEGRSLC*GVCFNT
Trigger: GGTATTGAAACAGACCCCCAAACACAGACTCCTGCC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AAGGCCACAGCAGAGCCACTCCACAGACTAAGACCTGTGTTGCCAAGGAATCAGTACCTAAGCACTTTCTaGTCTACAGGAAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: KATAEPLHRLRPVLPRNQYLSTF*STGSLG
Trigger: ACCAAGACTTCCTGTAGACAAGAAAGTGCTTAGGTA...CTGATTCCTTGGCAACACAGGTCTTAGTCTGTGGAGTGGCTCTGCTGTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TCTGTTTCAATACCATCTCCTGGGGTTCGCCGTGATGCAGAGGGAATCTTCTCGTGCAACAAGAAGAGTTaGTGTCGGAATGACAGATTC +
Preference number: 5 (lower is better)
Translates to: SVSIPSPGVRRDAEGIFSCNKKS*CRNDRF
Trigger: GAATCTGTCATTCCGACACAAACTCTTCTTGTTGCA...CGAGAAGATTCCCTCTGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TGGCTGCTCTTTCAATGTGAAGCCAACACCAACTGGAGAGATTTAACTATAAAGACAAAACCAGGGGCCTaGCCTGGGCAGTTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: WLLFQCEANTNWRDLTIKTKPGA*PGQFLR
Trigger: CCTTAGGAACTGCCCAGGCAAGGCCCCTGGTTTTGT...CTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCATGTCTACAGGAAGTCTaGGTGCTTTTCAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSCLQEV*VLFKFS
Trigger: GCTGAACTTGAAAAGCACCAAGACTTCCTGTAGACA...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AAATTGCTGAGGCCAGAAGCCTGCTTATGGTACTGTGACTTATGGGGAGTAGAGGGCCTCTTGGAATACTaGGTCAAACTGACGATATCC +
Preference number: 5 (lower is better)
Translates to: KLLRPEACLWYCDLWGVEGLLEY*VKLTIS
Trigger: GGATATCGTCAGTTTGACCAAGTATTCCAAGAGGCC...CTCTACTCCCCATAAGTCACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSTGRVI*GHGFQV
Trigger: CACTTGAAATCCATGGCCCAAAATGACTCTACCAGT...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS-3UTR CAA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGCAGGTACTGGAGCAGTaGCCGGCTTCGGGACGTGGC +
Preference number: 5 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQQVLEQ*PASGRG
Trigger: GCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTG...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS TCA 90 bp ATGGATGTCCAGGAAAATGACAACCCGCACACAATCAGACGTGAATaGTTTCTGCTCCAGTGTCTTCAGGCTCTGTGCAACAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: MDVQENDNPHTIRRE*FLLQCLQALCNKKS
Trigger: ACTCTTCTTGTTGCACAGAGCCTGAAGACACTGGAGCAGAAATCATTCACGTCTGATTGTGTGCGGGTTGTCATTTTCCTGGACATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000613420.1
ENST00000616143.4
CDS GCA 90 bp TCCAGGAAAATGACAACCCGCACACAATCAGACGTGAATGATTTCTaGTCCAGTGTCTTCAGGCTCTGTGCAACAAGAAGAGTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SRKMTTRTQSDVNDF*SSVFRLCATRRVCV
Trigger: GACACAAACTCTTCTTGTTGCACAGAGCCTGAAGACACTGGAGCAGAAATCATTCACGTCTGATTGTGTGCGGGTTGTCATTTTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000613420.1
ENST00000616143.4
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCACCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCAAGATCTGTAAAGTGCTGTTaGCTCAGTGAATCATGCGCC +
Preference number: 5 (lower is better)
Translates to: LLLLFPWDWHFILSFSSRSVKCC*LSESCA
Trigger: GGCGCATGATTCACTGAGCAAACAGCACTTTACAGA...TCTTGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGCCCGGAGGTAACTATTaGCCTGGAAAACTAGGAAAC +
Preference number: 5 (lower is better)
Translates to: IGILFSHSAQDHGQELCWPGGNY*PGKLGN
Trigger: GTTTCCTAGTTTTCCAGGCAAATAGTTACCTCCGGG...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACATGATGAACTCATACTaGCAGAGCTCGCAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDMMNSY*QSSQQR
Trigger: GCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCAT...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CCCCTGCTCCTCCTCTTCCCTTGGGATTGGCATTTTATTCTCTCATTCAGCTCACAGAAAGTACTTCAATaGTGTATTTGCCTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: PLLLLFPWDWHFILSFSSQKVLQ*CICLQP
Trigger: TGGCTGAAGGCAAATACACAATTGAAGTACTTTCTG...TGAGCTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS TCA 90 bp AGGCAAAACTTTCTGAAGTATCCTGCGCCTTCTCACCCACATCATTaGGGGACCTTGAGAACTTTAGTGTTCTTCTGGCTTTGGTATTCT +
Preference number: 5 (lower is better)
Translates to: RQNFLKYPAPSHPHH*GTLRTLVFFWLWYS
Trigger: AGAATACCAAAGCCAGAAGAACACTAAAGTTCTCAAGGTCCCTCAATGATGTGGGTGAGAAGGCGCAGGATACTTCAGAAAGTTTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS-3UTR CAA 90 bp ATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGGTGCAACAAGAAGAGTTaGTGTCGGAATGACAGATTC +
Preference number: 5 (lower is better)
Translates to: IGILFSHSAQDHGQELCWCNKKS*CRNDRF
Trigger: GAATCTGTCATTCCGACACAAACTCTTCTTGTTGCA...CCAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp GATTGGCATTTTATTCTCTCATTCAGCTCAAGACCATGGGCAGGAACTCTGCTGCCTCTTCCCTTGGGATaGGCATTTTATTCTCTCATT +
Preference number: 5 (lower is better)
Translates to: DWHFILSFSSRPWAGTLLPLPLG*AFYSLI
Trigger: AATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGG...CAGCAGAGTTCCTGCCCATGGTCTTGAGCTGAATGAGAGAATAAAATGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AAAGGCAAAGGAATCACCTCGTGTTTGCTTCATCCCCTTAGCAGGATGAACGAAGAAACACAAGAATGTTaGGAATTGCCAAGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: KGKGITSCLLHPLSRMNEETQEC*ELPRGL
Trigger: CAAACCTCTTGGCAATTCCAAACATTCTTGTGTTTC...TTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS TCA 90 bp CCAGTGTCTTCAGGCTCTGTGCAACAAGAAGAGTTTGTGTCGGAATaGCAGATTCCATATCCATGTTTATTTTCAAAGTTGGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: PVSSGSVQQEEFVSE*QIPYPCLFSKLGSV
Trigger: AACAGAGCCCAACTTTGAAAATAAACATGGATATGGAATCTGTCATTCCGACACAAACTCTTCTTGTTGCACAGAGCCTGAAGACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000613420.1
ENST00000616143.4
CDS-3UTR CAA 90 bp AGGTATACAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGATGCAACAAGAAGAGTTaGTGTCGGAATGACAGATTC +
Preference number: 5 (lower is better)
Translates to: RYTIGSKQFPSALHGCPGCNKKS*CRNDRF
Trigger: GAATCTGTCATTCCGACACAAACTCTTCTTGTTGCA...TCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTGTATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGAGGGACAAGGCCATTaGATGGTAGTGATTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDEGQGH*MVVILV
Trigger: AACCAAAATCACTACCATCAAATGGCCTTGTCCCTC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACTGCAACAAGAAGAGTTaGTGTCGGAATGACAGATTC +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDCNKKS*CRNDRF
Trigger: GAATCTGTCATTCCGACACAAACTCTTCTTGTTGCA...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGAAGCCTCTGGCCTGCTaGTCCTGTCTTAAAAGTCAT +
Preference number: 5 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQKPLAC*SCLKSH
Trigger: ATGACTTTTAAGACAGGACAAGCAGGCCAGAGGCTT...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACACTTCAATTGTGTATTaGCCTTCAGCCACATCCAGA +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDTSIVY*PSATSR
Trigger: TCTGGATGTGGCTGAAGGCAAATACACAATTGAAGT...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp CAATTGGCAGTAAACAATTTCCTTCAGCTCTTCATGGATGTCCAGGAAAATGACCAGAAAGTACTTCAATaGTGTATTTGCCTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: QLAVNNFLQLFMDVQENDQKVLQ*CICLQP
Trigger: TGGCTGAAGGCAAATACACAATTGAAGTACTTTCTG...GTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTACTGCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACGAATTGCCAAGAGGTTaGTGGTTCAGGGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDELPRG*WFRVLF
Trigger: AAAAAGAACCCTGAACCACAAACCTCTTGGCAATTC...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS-3UTR CAA 90 bp TTCAAAACAGAAAGTACTTCAATTGTGTATTTGCCTTCAGCCACATCCAGAGACATTCTCACAATAAACTaGGGCACAAAGACCAAATTG +
Preference number: 5 (lower is better)
Translates to: FKTESTSIVYLPSATSRDILTIN*GTKTKL
Trigger: CAATTTGGTCTTTGTGCCCAAGTTTATTGTGAGAAT...GTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAGTACTTTCTGTTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS-3UTR CAA 90 bp AATATTCAGTTTTGTTGTCATTACTCACTTCCTTTCCTTCCATTTCGATCTCAGACTTCAATTGTGTATTaGCCTTCAGCCACATCCAGA +
Preference number: 5 (lower is better)
Translates to: NIQFCCHYSLPFLPFRSQTSIVY*PSATSR
Trigger: TCTGGATGTGGCTGAAGGCAAATACACAATTGAAGT...CTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000453424.7
CDS CAA 90 bp CTCTCCGCGGGCTCCACGCCGGGCCCGCAGCGCAGGGATGGGTCCTaGGCGGCCGCCCCCACCCAGCCCAGCCCAGCCCAGCCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LSAGSTPGPQRRDGS*AAAPTQPSPAQPSP
Trigger: TGGGCTGGGCTGGGCTGGGCTGGGCTGGGTGGGGGCGGCCGCCAAGGACCCATCCCTGCGCTGCGGGCCCGGCGTGGAGCCCGCGGAGAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS GCA 72 bp CACCGGGGCAGAGAGACCCACTGCCTGGAGTCGCGCTaGCTCTCCGCGGGCTCCACGCCGGGCCCGCAGCGC +
Preference number: 6 (lower is better)
Translates to: HRGRETHCLESR*LSAGSTPGPQR
Trigger: GCGCTGCGGGCCCGGCGTGGAGCCCGCGGAGAGGCAGCGCGACTCCAGGCAGTGGGTCTCTCTGCCCCGGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000602712.2
CDS GCA 72 bp AGCTGGCGGCGCTACCGCCCTGGCCCGCCTCGAGCATaGCCGAGACGTGGACGCAGCAAGGCCGCACCTCCC +
Preference number: 6 (lower is better)
Translates to: SWRRYRPGPPRA*PRRGRSKAAPP
Trigger: GGGAGGTGCGGCCTTGCTGCGTCCACGTCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS GCA 72 bp GGCGGCCGGCCTAGAGCCCTGGGCGCTGACCGTTTCTaGGATTCCTGGTTCCGCTCGGCCCGGCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GGRPRALGADRF*DSWFRSARPQG
Trigger: CCCCTGGGGCCGGGCCGAGCGGAACCAGGAATCGCAGAAACGGTCAGCGCCCAGGGCTCTAGGCCGGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000602712.2
CDS CCA 72 bp CTACCGCCCTGGCCCGCCTCGAGCATGCCCGAGACGTaGACGCAGCAAGGCCGCACCTCCCCCAGCGCGTCG +
Preference number: 6 (lower is better)
Translates to: LPPWPASSMPET*TQQGRTSPSAS
Trigger: CGACGCGCTGGGGGAGGTGCGGCCTTGCTGCGTCCACGTCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 72 bp GCAGACGCGAGCACCGGGGCAGAGAGACCCACTGCCTaGAGTCGCGCTGCCTCTCCGCGGGCTCCACGCCGG +
Preference number: 6 (lower is better)
Translates to: ADASTGAERPTA*SRAASPRAPRR
Trigger: CCGGCGTGGAGCCCGCGGAGAGGCAGCGCGACTCCAGGCAGTGGGTCTCTCTGCCCCGGTGCTCGCGTCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000602712.2
CDS GCA 72 bp AGGGGCAGACGCGAGCACCGGGGCAGAGAGACCCACTaGCTGGAGTCGCGCTGCCTCTCCGCGGGCTCCACG +
Preference number: 6 (lower is better)
Translates to: RGRREHRGRETH*LESRCLSAGST
Trigger: CGTGGAGCCCGCGGAGAGGCAGCGCGACTCCAGGCAGTGGGTCTCTCTGCCCCGGTGCTCGCGTCTGCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000602712.2
CDS CCA 72 bp CCTAGAGCCCTGGGCGCTGACCGTTTCTGCGATTCCTaGTTCCGCTCGGCCCGGCCCCAGGGGCAGACGCGA +
Preference number: 6 (lower is better)
Translates to: PRALGADRFCDS*FRSARPQGQTR
Trigger: TCGCGTCTGCCCCTGGGGCCGGGCCGAGCGGAACCAGGAATCGCAGAAACGGTCAGCGCCCAGGGCTCTAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000602712.2
CDS CCA 72 bp GACTCCGATCCTAGAGGCCGCAGGAGTTACCTCAGGTaGGCTCTGAGCTGGCGGCGCTACCGCCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: DSDPRGRRSYLR*ALSWRRYRPGP
Trigger: CGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCTGCGGCCTCTAGGATCGGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319836.7
CDS CCA 72 bp GCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGCTCATaGAACCTGTGCAGGCTGCTGGCGCTCAAGCCGTGC +
Preference number: 6 (lower is better)
Translates to: AVCRRAAQLSSS*NLCRLLALKPC
Trigger: GCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CAA 72 bp CAGAAGCCCATACTCCCTGCCAGCCCGCTGGAGGACTaGGCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: QKPILPASPLED*AVCRRAAQLSS
Trigger: GCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS TCA 72 bp CCTGTGCAGGCTGCTGGCGCTCAAGCCGTGCGAGAGTaGGAACAGGTACTGGAGCAGTTGCCGGCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: PVQAAGAQAVRE*EQVLEQLPASG
Trigger: TCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 72 bp TCGGAGCTCTTGATCCACTGCTGCAGGCAGGCCTGGTaGACGAAGTGGAGGCTTCCTGTGCAGTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SELLIHCCRQAW*TKWRLPVQWQG
Trigger: CCCCTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000602712.2
ENST00000613420.1
ENST00000616143.4
CDS GCA 72 bp AGCTCGCAGCAGCGCGTGTCGGAGCTCTTGATCCACTaGTGCAGGCAGGCCTGGTGCACGAAGTGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: SSQQRVSELLIH*CRQAWCTKWRL
Trigger: AAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTCCGACACGCGCTGCTGCGAGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000602712.2
ENST00000613420.1
ENST00000616143.4
CDS GCA 72 bp GTCTCCCATCTCGTCAGAGCAGAAGCCCATACTCCCTaGCAGCCCGCTGGAGGACTTGGCAGTGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: VSHLVRAEAHTP*QPAGGLGSVQA
Trigger: CGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTGCTCTGACGAGATGGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 72 bp CTGGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTACTaGAGCAGTTGCCGGCTTCGGGACGTGGCCTCACCA +
Preference number: 6 (lower is better)
Translates to: LALKPCESENRY*SSCRLRDVASP
Trigger: TGGTGAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CAA 90 bp TCGTCAGAGCAGAAGCCCATACTCCCTGCCAGCCCGCTGGAGGACTaGGCAGTGTGCAGGCGAGCAGCGCAGCTCTCCAGCTCATGGAAC +
Preference number: 6 (lower is better)
Translates to: SSEQKPILPASPLED*AVCRRAAQLSSSWN
Trigger: GTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGCGGGCTGGCAGGGAGTATGGGCTTCTGCTCTGACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 72 bp AAGCCGTGCGAGAGTGAGAACAGGTACTGGAGCAGTTaGCGGCTTCGGGACGTGGCCTCACCATCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: KPCESENRYWSS*RLRDVASPSAF
Trigger: GAAGGCGGATGGTGAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 72 bp CAGCGCAGCTCTCCAGCTCATGGAACCTGTGCAGGCTaGTGGCGCTCAAGCCGTGCGAGAGTGAGAACAGGT +
Preference number: 6 (lower is better)
Translates to: QRSSPAHGTCAG*WRSSRARVRTG
Trigger: ACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 72 bp GTGTCGGAGCTCTTGATCCACTGCTGCAGGCAGGCCTaGTGCACGAAGTGGAGGCTTCCTGTGCAGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VSELLIHCCRQA*CTKWRLPVQWQ
Trigger: CTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCTGCAGCAGTGGATCAAGAGCTCCGACAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000602712.2
ENST00000613420.1
ENST00000616143.4
CDS GCA 72 bp TCATGGAACCTGTGCAGGCTGCTGGCGCTCAAGCCGTaGGAGAGTGAGAACAGGTACTGGAGCAGTTGCCGG +
Preference number: 6 (lower is better)
Translates to: SWNLCRLLALKP*ESENRYWSSCR
Trigger: CCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 72 bp CGCAGCTCTCCAGCTCATGGAACCTGTGCAGGCTGCTaGCGCTCAAGCCGTGCGAGAGTGAGAACAGGTACT +
Preference number: 6 (lower is better)
Translates to: RSSPAHGTCAGC*RSSRARVRTGT
Trigger: AGTACCTGTTCTCACTCTCGCACGGCTTGAGCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CCA 72 bp AGGGAGAAGGACAATCCAGGTCGCTGTCCTTTTCCGTaGAGCAGAGGGGCGCCCGCAGAACCCTACTCTTCA +
Preference number: 6 (lower is better)
Translates to: REKDNPGRCPFP*SRGAPAEPYSS
Trigger: TGAAGAGTAGGGTTCTGCGGGCGCCCCTCTGCTCCACGGAAAAGGACAGCGACCTGGATTGTCCTTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS TCA 72 bp TTTACAGATGTGCACACTCAGGCCAAAGACGACGGCTaGCGGGCCAACGTCTCACAGCCGGTCAGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: FTDVHTQAKDDG*RANVSQPVRER
Trigger: CCTTTCCCTGACCGGCTGTGAGACGTTGGCCCGTCAGCCGTCGTCTTTGGCCTGAGTGTGCACATCTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000453980.3
ENST00000602712.2
CDS CCA 72 bp TTCACAGTGGCAGATCCTGCAGATGTCCTGGCTGGATaGCGTGATAGAAGTGCGAGAGAAGGAGGACACCGG +
Preference number: 6 (lower is better)
Translates to: FTVADPADVLAG*RDRSAREGGHR
Trigger: CCGGTGTCCTCCTTCTCTCGCACTTCTATCACGCCATCCAGCCAGGACATCTGCAGGATCTGCCACTGTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453980.3
ENST00000602712.2
ENST00000612386.1
CDS CAA 90 bp TTTCCGTGGAGCAGAGGGGCGCCCGCAGAACCCTACTCTTCAGTTTaGCAGATGTGCTGTCCTCAAAGACATCGTCGTCTCCCATCTCGT +
Preference number: 6 (lower is better)
Translates to: FPWSRGAPAEPYSSV*QMCCPQRHRRLPSR
Trigger: ACGAGATGGGAGACGACGATGTCTTTGAGGACAGCACATCTGCAAAACTGAAGAGTAGGGTTCTGCGGGCGCCCCTCTGCTCCACGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS GCA 72 bp CACGGATCACTAGTCCGAGCTTCCATTTTACAGATGTaGACACTCAGGCCAAAGACGACGGCTGACGGGCCA +
Preference number: 6 (lower is better)
Translates to: HGSLVRASILQM*TLRPKTTADGP
Trigger: TGGCCCGTCAGCCGTCGTCTTTGGCCTGAGTGTGCACATCTGTAAAATGGAAGCTCGGACTAGTGATCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319836.7
ENST00000451376.1
ENST00000453980.3
ENST00000602712.2
CDS CCA 72 bp AAACACTGCACTGGAACTGCAGATGTCCTGGCTGGATaGCGTGATAGAAGTGCGAGAGAAGGAGGACACCGG +
Preference number: 6 (lower is better)
Translates to: KHCTGTADVLAG*RDRSAREGGHR
Trigger: CCGGTGTCCTCCTTCTCTCGCACTTCTATCACGCCATCCAGCCAGGACATCTGCAGTTCCAGTGCAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS CAA 72 bp AGCAGAGGGGCGCCCGCAGAACCCTACTCTTCAGTTTaGCAGATGTGCTGTCCTCAAAGACATCGTCGTCTC +
Preference number: 6 (lower is better)
Translates to: SRGAPAEPYSSV*QMCCPQRHRRL
Trigger: GAGACGACGATGTCTTTGAGGACAGCACATCTGCAAAACTGAAGAGTAGGGTTCTGCGGGCGCCCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS TCA 72 bp GTCACAGTGAGCCCTTGTGTCAGAGAACTCTGGCAGTaGGGAGCTTTCGAGACAACAGCAGACTGCACGGAA +
Preference number: 6 (lower is better)
Translates to: VTVSPCVRELWQ*GAFETTADCTE
Trigger: TTCCGTGCAGTCTGCTGTTGTCTCGAAAGCTCCTCACTGCCAGAGTTCTCTGACACAAGGGCTCACTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453424.7
CDS TCA 72 bp CACCAGCTTTCTGGGGGTCACTGGTTTCAGGAAGGGTaGAGCATCCCTTCCTCCCACGTACTTTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: HQLSGGHWFQEG*SIPSSHVLFSV
Trigger: CACTGAGAAAAGTACGTGGGAGGAAGGGATGCTTCACCCTTCCTGAAACCAGTGACCCCCAGAAAGCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602712.2
CDS CCA 72 bp GGCATCCTGGGATGGAATGGCAGAGATCTGATGCAGTaGCATGCTCATCCCAACCTCTTATCTGGTCGTCTT +
Preference number: 6 (lower is better)
Translates to: GILGWNGRDLMQ*HAHPNLLSGRL
Trigger: AAGACGACCAGATAAGAGGTTGGGATGAGCATGCCACTGCATCAGATCTCTGCCATTCCATCCCAGGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
ENST00000453980.3
ENST00000602712.2
CDS CCA 72 bp GGGCTCTCATCATCTCCTTCACAGTGGCAGATCCTATaGTGGAAGGAAAACCTGTCATTCCAAGGACAGTCC +
Preference number: 6 (lower is better)
Translates to: GLSSSPSQWQIL*WKENLSFQGQS
Trigger: GGACTGTCCTTGGAATGACAGGTTTTCCTTCCACCATAGGATCTGCCACTGTGAAGGAGATGATGAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476962.1
ENST00000613420.1
CDS CCA 72 bp ATTTTGGGCCATGGATTTCAAGCTATGCTTTCCTTCTaGCACCCCGAATGTACGCAGGTCTCTCGAGATCAC +
Preference number: 6 (lower is better)
Translates to: ILGHGFQAMLSF*HPECTQVSRDH
Trigger: GTGATCTCGAGAGACCTGCGTACATTCGGGGTGCCAGAAGGAAAGCATAGCTTGAAATCCATGGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000602712.2
CDS CCA 72 bp TCTGATGCAGTGGCATGCTCATCCCAACCTCTTATCTaGTCGTCTTCTTCACAGAAGAGAGTCTCCACTGGT +
Preference number: 6 (lower is better)
Translates to: SDAVACSSQPLI*SSSSQKRVSTG
Trigger: ACCAGTGGAGACTCTCTTCTGTGAAGAAGACGACCAGATAAGAGGTTGGGATGAGCATGCCACTGCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000453424.7
ENST00000453980.3
ENST00000602712.2
CDS CAA 90 bp CCCACATCATTGAGGGACCTTGAGAACTTTAGTGTTCTTCTGGCTTaGGTATTCTTAGCAGGCTTCAAGGCCTGGGCCCATTCTGAACCA +
Preference number: 6 (lower is better)
Translates to: PTSLRDLENFSVLLA*VFLAGFKAWAHSEP
Trigger: TGGTTCAGAATGGGCCCAGGCCTTGAAGCCTGCTAAGAATACCAAAGCCAGAAGAACACTAAAGTTCTCAAGGTCCCTCAATGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS TCA 72 bp CAGGAAAATGACAACCCGCACACAATCAGACGTGAATaGTTTCTGCTCCAGTGTCTTCAGGCTCTGTGCAAC +
Preference number: 6 (lower is better)
Translates to: QENDNPHTIRRE*FLLQCLQALCN
Trigger: GTTGCACAGAGCCTGAAGACACTGGAGCAGAAATCATTCACGTCTGATTGTGTGCGGGTTGTCATTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000613420.1
ENST00000616143.4
CDS CCA 72 bp CTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATTTTaGGCCATGGATTTCAAGTGCGGAGCTGCCTTATAC +
Preference number: 6 (lower is better)
Translates to: LHRRESPLVESF*AMDFKCGAALY
Trigger: GTATAAGGCAGCTCCGCACTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS CCA 72 bp CTCTCATCATCTCCTTCACAGTGGCAGATCCTATGGTaGAAGGAAAACCTGTCATTCCAAGGACAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: LSSSPSQWQILW*KENLSFQGQSH
Trigger: ATGGGACTGTCCTTGGAATGACAGGTTTTCCTTCCACCATAGGATCTGCCACTGTGAAGGAGATGATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476962.1
ENST00000613420.1
CDS CAA 90 bp TGGTCGTCTTCTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGCTGTAATCCCAGTACTTTGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: WSSSSQKRVSTGRVI*GHGFQAVIPVLWEA
Trigger: AGCTTCCCAAAGTACTGGGATTACAGCTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAGAAGACGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453980.3
CDS CCA 72 bp CTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATTTTaGGCCATGGATTTCAAGCTATGCTTTCCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: LHRRESPLVESF*AMDFKLCFPSG
Trigger: GCCAGAAGGAAAGCATAGCTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000602712.2
CDS CAA 72 bp TCTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGTGCGGAGCTGCCTTATA +
Preference number: 6 (lower is better)
Translates to: SSQKRVSTGRVI*GHGFQVRSCLI
Trigger: TATAAGGCAGCTCCGCACTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395769.6
ENST00000453424.7
CDS CAA 72 bp GAGCGACCGGCAGAAAGGCATGAAACACAAGAATGTTaGGAATTGCCAAGAGGTTTGTGGTTCAGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: ERPAERHETQEC*ELPRGLWFRVL
Trigger: AAGAACCCTGAACCACAAACCTCTTGGCAATTCCAAACATTCTTGTGTTTCATGCCTTTCTGCCGGTCGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS TCA 72 bp TTTCTGAAGTATCCTGCGCCTTCTCACCCACATCATTaGGGGACCTTGAGAACTTTAGTGTTCTTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: FLKYPAPSHPHH*GTLRTLVFFWL
Trigger: AAGCCAGAAGAACACTAAAGTTCTCAAGGTCCCTCAATGATGTGGGTGAGAAGGCGCAGGATACTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453424.7
ENST00000616143.4
CDS CAA 72 bp TCTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGCTATGCTTTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SSQKRVSTGRVI*GHGFQAMLSFW
Trigger: CCAGAAGGAAAGCATAGCTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319836.7
ENST00000602712.2
CDS CAA 72 bp TCTTCACAGAAGAGAGTCTCCACTGGTAGAGTCATTTaGGGCCATGGATTTCAAGCTGTAATCCCAGTACTT +
Preference number: 6 (lower is better)
Translates to: SSQKRVSTGRVI*GHGFQAVIPVL
Trigger: AAGTACTGGGATTACAGCTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453980.3
CDS CCA 72 bp TTTCATGTTTTTCAGATATGTCCTAACCCATTCGGTTaGCCTCAAAAGTCTCCCATTCCCATTCTGTATCGG +
Preference number: 6 (lower is better)
Translates to: FHVFQICPNPFG*PQKSPIPILYR
Trigger: CCGATACAGAATGGGAATGGGAGACTTTTGAGGCCAACCGAATGGGTTAGGACATATCTGAAAAACATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451376.1
CDS TCA 72 bp TCAGGCTCTGTGCAACAAGAAGAGTTTGTGTCGGAATaGCAGATTCCATATCCATGTTTATTTTCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: SGSVQQEEFVSE*QIPYPCLFSKL
Trigger: CAACTTTGAAAATAAACATGGATATGGAATCTGTCATTCCGACACAAACTCTTCTTGTTGCACAGAGCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000613420.1
ENST00000616143.4
CDS TCA 72 bp GACAGTTTTGAACATAGATCACTCTATTATAGGCCTTaGGTCTCTTCCACAATTGCACATACACTTTACACT +
Preference number: 6 (lower is better)
Translates to: DSFEHRSLYYRP*VSSTIAHTLYT
Trigger: AGTGTAAAGTGTATGTGCAATTGTGGAAGAGACTCAAGGCCTATAATAGAGTGATCTATGTTCAAAACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319836.7
ENST00000395769.6
ENST00000395771.7
ENST00000453424.7
ENST00000476962.1
ENST00000613420.1
ENST00000616143.4
CDS CAA 72 bp AGAGCATGTTCACATTATTTCATGACTCTCAACGACTaGAGTTCGTATACTCCTTCAGTTTTCATGCTTTTT +
Preference number: 6 (lower is better)
Translates to: RACSHYFMTLND*SSYTPSVFMLF
Trigger: AAAAAGCATGAAAACTGAAGGAGTATACGAACTCAAGTCGTTGAGAGTCATGAAATAATGTGAACATGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451376.1