RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARCHF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000136536

Ensembl transcript IDs: ENST00000259050.8, ENST00000409175.6, ENST00000409591.5, ENST00000420397.1, ENST00000421037.1, ENST00000461582.1, ENST00000473749.1, ENST00000478396.1, ENST00000539065.5

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAATGAAGTGCTATATATATATATATGATGGAGTCTCACTGTGCTaGCCAGGCTACAGTGCAGTGGCTCGATCTTGGCTCTCTCCAATC +
Preference number: 1 (lower is better)
Translates to: VMKCYIYIYDGVSLC*PGYSAVARSWLSPI
Trigger: GATTGGAGAGAGCCAAGATCGAGCCACTGCACTGTAGCCTGGGCAGCACAGTGAGACTCCATCATATATATATATATAGCACTTCATTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR TCA 90 bp TTGACTAATGGCAACAAAGTTCCAGCTTGTGTAGTCTCTTTTTATTaGCCACATGAATCGAAAACACTCATCACAATTAATGGCACTATC +
Preference number: 1 (lower is better)
Translates to: LTNGNKVPACVVSFY*PHESKTLITINGTI
Trigger: GATAGTGCCATTAATTGTGATGAGTGTTTTCGATTCATGTGGTCAATAAAAAGAGACTACACAAGCTGGAACTTTGTTGCCATTAGTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR CCA 90 bp TTTTCGAATTACATTAGCCACATTGTCAAGTGTTCAAATCACAGGTaGTTAGTGGCTACTGTACTGGGCAACATACATTATAGAACATTT +
Preference number: 1 (lower is better)
Translates to: FSNYISHIVKCSNHR*LVATVLGNIHYRTF
Trigger: AAATGTTCTATAATGTATGTTGCCCAGTACAGTAGCCACTAACCACCTGTGATTTGAACACTTGACAATGTGGCTAATGTAATTCGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR TCA 90 bp ACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATaGCCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTG +
Preference number: 1 (lower is better)
Translates to: TDRRKIQCYGSIHNS*PHSIDPFMVNNVHL
Trigger: CAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
3UTR-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACAGGCTACAGTGCAGTaGCTCGATCTTGGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTQATVQ*LDLGSL
Trigger: GAGAGAGCCAAGATCGAGCCACTGCACTGTAGCCTG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGGGGTTTCGCCATATTaGCTGGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTGVSPY*LGWSQT
Trigger: AGTTTGAGACCAGCCCAGTCAATATGGCGAAACCCC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR CCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCAGGCTACAGTGCAGTaGCTCGATCTTGGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNQATVQ*LDLGSL
Trigger: GAGAGAGCCAAGATCGAGCCACTGCACTGTAGCCTG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR GCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTTCAAGCAATTCTCCTaGCTCAGCCTCCTTAGTAGC +
Preference number: 2 (lower is better)
Translates to: QTQMVEPILSQTYTACYCFKQFS*LSLLSS
Trigger: GCTACTAAGGAGGCTGAGGCAGGAGAATTGCTTGAA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR GCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCTTGGTCTCCCAAAGTaGTGGGATTACATGCGTGAG +
Preference number: 2 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNLGLPK*WDYMRE
Trigger: CTCACGCATGTAATCCCAGCACTTTGGGAGACCAAG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAATTGTACCACTCCTTaGAGAACTACAGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: QTQMVEPILSQTYTACYCNCTTP*RTTGTV
Trigger: TACTGTGCCTGTAGTTCTTCAAGGAGTGGTACAATT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACAATGCAAAGGTAACTaGCAAGAGGTGAGCAAATGT +
Preference number: 2 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTQCKGN*QEVSKC
Trigger: ACATTTGCTCACCTCTTGCCAGTTACCTTTGCATTG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAAGTATACACAACTCATaGCCACACAGTATAGATCCA +
Preference number: 2 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSIHNS*PHSIDP
Trigger: TGGATCTATACTGTGTGGTCATGAGTTGTGTATACT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR GCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTACACAAGCACAAGCATaGTCTGTAAGAGCTTTACAT +
Preference number: 2 (lower is better)
Translates to: QTQMVEPILSQTYTACYCTQAQA*SVRALH
Trigger: ATGTAAAGCTCTTACAGAGCATGCTTGTGCTTGTGT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR GCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTCCAGAATGTAGAAACTaGTTTCTTCAACATCTTGGT +
Preference number: 2 (lower is better)
Translates to: QTQMVEPILSQTYTACYCPECRN*FLQHLG
Trigger: ACCAAGATGTTGAAGAAAGCAGTTTCTACATTCTGG...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATAGTATACACAACTCATaGCCACACAGTATAGATCCA +
Preference number: 2 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNSIHNS*PHSIDP
Trigger: TGGATCTATACTGTGTGGTCATGAGTTGTGTATACT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAGTATACACAACTCATaGCCACACAGTATAGATCCA +
Preference number: 2 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSIHNS*PHSIDP
Trigger: TGGATCTATACTGTGTGGTCATGAGTTGTGTATACT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
3UTR-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTATTACACAGGCAGGCTaGTTTACTACATCCAGAATG +
Preference number: 3 (lower is better)
Translates to: QTQMVEPILSQTYTACYCITQAG*FTTSRM
Trigger: CATTCTGGATGTAGTAAACAAGCCTGCCTGTGTAAT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR TCA 72 bp GGTCCATTACTGACTGAAGTATACTGTCTAGAAGTCTaGGGCTCAAAGAAAAGTAATCCCTCTTCTGAATCC +
Preference number: 3 (lower is better)
Translates to: GPLLTEVYCLEV*GSKKSNPSSES
Trigger: GGATTCAGAAGAGGGATTACTTTTCTTTGAGCCTCAGACTTCTAGACAGTATACTTCAGTCAGTAATGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR-3UTR CAA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGTAAAGCTTAAGCCATaGTTATCACTGTCATTTAGC +
Preference number: 3 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTVKLKP*LSLSFS
Trigger: GCTAAATGACAGTGATAACAATGGCTTAAGCTTTAC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR CCA 72 bp TACATTAGCCACATTGTCAAGTGTTCAAATCACAGGTaGTTAGTGGCTACTGTACTGGGCAACATACATTAT +
Preference number: 3 (lower is better)
Translates to: YISHIVKCSNHR*LVATVLGNIHY
Trigger: ATAATGTATGTTGCCCAGTACAGTAGCCACTAACCACCTGTGATTTGAACACTTGACAATGTGGCTAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR GCA 72 bp ATTTTTCAACAGGCCAAGAGGCCTCTGGTAATGAAGTaGTATATATATATATATGATGGAGTCTCACTGTGC +
Preference number: 3 (lower is better)
Translates to: IFQQAKRPLVMK*YIYIYDGVSLC
Trigger: GCACAGTGAGACTCCATCATATATATATATATAGCACTTCATTACCAGAGGCCTCTTGGCCTGTTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR GCA 72 bp ACGTATCACTTATCAATGGGGATACGTTCTAAGAAATaGATAGTTAGGGAATCTTGTGTGAAAATCAGCTTG +
Preference number: 3 (lower is better)
Translates to: TYHLSMGIRSKK*IVRESCVKISL
Trigger: CAAGCTGATTTTCACACAAGATTCCCTAACTATGCATTTCTTAGAACGTATCCCCATTGATAAGTGATACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR TCA 72 bp GGCAACAAAGTTCCAGCTTGTGTAGTCTCTTTTTATTaGCCACATGAATCGAAAACACTCATCACAATTAAT +
Preference number: 3 (lower is better)
Translates to: GNKVPACVVSFY*PHESKTLITIN
Trigger: ATTAATTGTGATGAGTGTTTTCGATTCATGTGGTCAATAAAAAGAGACTACACAAGCTGGAACTTTGTTGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR TCA 72 bp TATTTTGTCCCAAACCTACACAGCATGTTACTGTGCTaGATACTGCAGACAATTGTAACACAATATTTGTGT +
Preference number: 3 (lower is better)
Translates to: YFVPNLHSMLLC*ILQTIVTQYLC
Trigger: ACACAAATATTGTGTTACAATTGTCTGCAGTATTCAGCACAGTAACATGCTGTGTAGGTTTGGGACAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
3UTR TCA 72 bp TCTACAACTACAATGTCCAATGAGCCACTAGCCACATaGGGCTATTTAAGTAAATTTAGTTTAAAATCCAGT +
Preference number: 3 (lower is better)
Translates to: STTTMSNEPLAT*GYLSKFSLKSS
Trigger: ACTGGATTTTAAACTAAATTTACTTAAATAGCCTCATGTGGCTAGTGGCTCATTGGACATTGTAGTTGTAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGGCAGCGAAGCACAATaGCGCCCGCCCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHGSEAQ*RPPLSR
Trigger: CCGGGAGAGGGGCGGGCGCCATTGTGCTTCGCTGCC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACGCCGCCTTTCTCCTTaGAGTTCTAGGCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTRRLSP*SSRPVT
Trigger: AGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTCGCCGCCTTTCTCCTTaGAGTTCTAGGCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCRRLSP*SSRPVT
Trigger: AGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCG...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGCCACCACCGTTAAGTaGCCCTCCCTGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGATTVK*PSLLLL
Trigger: GAGGAGGAGCAGGGAGGGGCACTTAACGGTGGTGGC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539065.5
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTCAGGCTACAGTGCAGTaGCTCGATCTTGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCQATVQ*LDLGSL
Trigger: GAGAGAGCCAAGATCGAGCCACTGCACTGTAGCCTG...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATTCCCGTTGCTGGTTCTaGGATCTTGAGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNSRCWF*DLERAP
Trigger: GGGAGCACGCTCAAGATCGCAGAACCAGCAACGGGA...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGCTAGAAGCTATGCGTaGCAGCAATCTCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTARSYA*QQSPRC
Trigger: ACAACGAGGAGATTGCTGTCACGCATAGCTTCTAGC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTGCTAGAAGCTATGCGTaGCAGCAATCTCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCARSYA*QQSPRC
Trigger: ACAACGAGGAGATTGCTGTCACGCATAGCTTCTAGC...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACACCTGTTGTGGCACTaGTTGATGCTGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTHLLWH*LMLQML
Trigger: AAGCATCTGCAGCATCAAGCAGTGCCACAACAGGTG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACAAATTACTCCCAAGTaGTGGAGGGACTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTQITPK*WRDCKP
Trigger: CGGTTTGCAGTCCCTCCAGCACTTGGGAGTAATTTG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAATGCTTGTGGTCTGTTaGCAGCAGCTCCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTMLVVC*QQLQED
Trigger: ATCCTCTTGGAGCTGCTGCCAACAGACCACAAGCAT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTATTACTCCCAAGTGCTaGAGGGACTGCAAACCGGAA +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCITPKC*RDCKPE
Trigger: TTCCGGTTTGCAGTCCCTCCAGCACTTGGGAGTAAT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAGCCTCCTTAGTAGCTaGGACCACAGACATCTGTCA +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCSLLSS*DHRHLS
Trigger: TGACAGATGTCTGTGGTCCCAGCTACTAAGGAGGCT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPGVLGP*LRKCSR
Trigger: CCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHGVLGP*LRKCSR
Trigger: CCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCTGGTTCTGCGATCTTaGGCGTGCTCCCTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNLVLRS*ACSLSY
Trigger: ATAACTCAGGGAGCACGCTCAAGATCGCAGAACCAG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTGGTCTTTTTGAATCATaGTCCCGTTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCGLFES*SRCWFC
Trigger: GCAGAACCAGCAACGGGATCATGATTCAAAAAGACC...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTATTGTGGCTAAGAGATaGCAAACCCCATCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCIVAKR*QTPSSP
Trigger: AGGCGAAGATGGGGTTTGTCATCTCTTAGCCACAAT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATTGTTGTGGCACTGCTTaGTGCTGCAGATGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNCCGTA*CCRCLW
Trigger: CCACAAGCATCTGCAGCATCAAGCAGTGCCACAACA...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATGGGGTTTCGCCATATTaGCTGGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNGVSPY*LGWSQT
Trigger: AGTTTGAGACCAGCCCAGTCAATATGGCGAAACCCC...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTCCCGTTGCTGGTTCTaGGATCTTGAGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSRCWF*DLERAP
Trigger: GGGAGCACGCTCAAGATCGCAGAACCAGCAACGGGA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTCCCGTTGCTGGTTCTaGGATCTTGAGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSRCWF*DLERAP
Trigger: GGGAGCACGCTCAAGATCGCAGAACCAGCAACGGGA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACCGCCGCCTTTCTCCTTaGAGTTCTAGGCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHRRLSP*SSRPVT
Trigger: AGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCG...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTCTATACCATGCAGATTaGAATGGTGACGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCLYHAD*NGDADA
Trigger: AGCATCTGCGTCACCATTTCAATCTGCATGGTATAG...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACTATACCATGCAGATTaGAATGGTGACGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTLYHAD*NGDADA
Trigger: AGCATCTGCGTCACCATTTCAATCTGCATGGTATAG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTCTGGTTCTGCGATCTTaGGCGTGCTCCCTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGLVLRS*ACSLSY
Trigger: ATAACTCAGGGAGCACGCTCAAGATCGCAGAACCAG...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATCTGACTCAGAGCTATaGTTGTGGCTAAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSDSEL*LWLRDD
Trigger: GTCATCTCTTAGCCACAATCATAGCTCTGAGTCAGA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAGAGGTAGGTATCCTTaGAGATTCATCTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCRGRYP*RFISSL
Trigger: GAGGGAAGAGATGAATCTTCAAGGATACCTACCTCT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTGTTGTGGCACTGCTTaGTGCTGCAGATGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGCCGTA*CCRCLW
Trigger: CCACAAGCATCTGCAGCATCAAGCAGTGCCACAACA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGTATTTCTTCCACCTTaGGCCGAATCTGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTVFLPP*AESDVE
Trigger: CTCTACATCAGATTCGGCTCAAGGTGGAAGAAATAC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAGGAAAAACCAGCTCTaGCCATGTAAGTTCATGCCA +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCRKNQL*PCKFMP
Trigger: TGGCATGAACTTACATGGTCAGAGCTGGTTTTTCCT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAATCCAGGCTGCGTATTaGTTCGGGAAGATTCTGATT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTIQAAY*FGKILI
Trigger: AATCAGAATCTTCCCGAAGCAATACGCAGCCTGGAT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACACTGAGAAGCTTCAGATaGCCTATTATCGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTLRSFR*PIIGNF
Trigger: GAAGTTCCCGATAATAGGGCATCTGAAGCTTCTCAG...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTACTGCAAACTTCCTGTaGACTTGCATGGCTCTATCA +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCTANFL*TCMALS
Trigger: TGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAACTGCAAACTTCCTGTaGACTTGCATGGCTCTATCA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTTANFL*TCMALS
Trigger: TGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGACCATGTAAGTTCATaGCAGGGCAGAAAGCATTCA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTDHVSS*QGRKHS
Trigger: TGAATGCTTTCTGCCCTGGCATGAACTTACATGGTC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS-3UTR CCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATATGCTTGTGGTCTGTTaGCAGCAGCTCCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNMLVVC*QQLQED
Trigger: ATCCTCTTGGAGCTGCTGCCAACAGACCACAAGCAT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAAAGGAGCTGGAAGGTTaGACAGAAATTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTKELEG*TEILLG
Trigger: TCCAAGAAGAATTTCTGTTCAACCTTCCAGCTCCTT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCTTGAGCGTGCTCCCTaGGTTATCTCAGATTCACTA +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNLERAP*VISDSL
Trigger: TAGTGAATCTGAGATAACTCAGGGAGCACGCTCAAG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTCTGGTTCTGCGATCTTaGGCGTGCTCCCTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPLVLRS*ACSLSY
Trigger: ATAACTCAGGGAGCACGCTCAAGATCGCAGAACCAG...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGAAGATCTAGGAACTTaGCTATGCCTCCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTEDLGT*LCLQDE
Trigger: TTCATCTTGGAGGCATAGTCAAGTTCCTAGATCTTC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTGAACTTAGTATGGTCTaGTGTTCAGAAGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCELSMV*CSEGNW
Trigger: CCAATTGCCTTCTGAACATCAGACCATACTAAGTTC...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGAACTTAGTATGGTCTaGTGTTCAGAAGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTELSMV*CSEGNW
Trigger: CCAATTGCCTTCTGAACATCAGACCATACTAAGTTC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTGGCTTCATCTCTACTTaGACTGTAAGAAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCGFIST*TVRKSR
Trigger: CCTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCC...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATGGGAACTTCAGAAGCTaGTGGTACATTACTACGGGA +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNGNFRS*WYITTG
Trigger: TCCCGTAGTAATGTACCATCAGCTTCTGAAGTTCCC...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTACCTTGAGCCGAATCTaGTGTAGAGCCACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGTLSRI*CRATCC
Trigger: ACAACAGGTGGCTCTACATCAGATTCGGCTCAAGGT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSSICA*RVLARL
Trigger: TAACCTTGCAAGAACTCTTCAGGCACATATGGAAGA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGGGGTTTCGCCATATTaGCTGGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHGVSPY*LGWSQT
Trigger: AGTTTGAGACCAGCCCAGTCAATATGGCGAAACCCC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGCGGCTACATGGTACTaGAAATGCAGGCATTACACC +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGAATWY*KCRHYT
Trigger: GGTGTAATGCCTGCATTTTCAGTACCATGTAGCCGC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTCAAATTACTCCCAAGTaGTGGAGGGACTGCAAACCG +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGQITPK*WRDCKP
Trigger: CGGTTTGCAGTCCCTCCAGCACTTGGGAGTAATTTG...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGAGATCTTCCATATGTaGCTGAAGAGTTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTEIFHM*LKSSCK
Trigger: CTTGCAAGAACTCTTCAGGCACATATGGAAGATCTC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATTTCAAGCAATTCTCCTaGCTCAGCCTCCTTAGTAGC +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNFKQFS*LSLLSS
Trigger: GCTACTAAGGAGGCTGAGGCAGGAGAATTGCTTGAA...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTATGCTTGTGGTCTGTTaGCAGCAGCTCCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGMLVVC*QQLQED
Trigger: ATCCTCTTGGAGCTGCTGCCAACAGACCACAAGCAT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTATTACTCCCAAGTGCTaGAGGGACTGCAAACCGGAA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGITPKC*RDCKPE
Trigger: TTCCGGTTTGCAGTCCCTCCAGCACTTGGGAGTAAT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATCGGACACGTGTGCTTaGTTCATTTGTATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSDTCA*FICISH
Trigger: ATGGGAAATACAAATGAACCAAGCACACGTGTCCGA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATCAAATGTCCTGTTATaGTCTCCGTCTTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSNVLL*SPSSSE
Trigger: TTCCGAAGAAGACGGAGACCATAACAGGACATTTGA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTCAATGCAAAGGTAACTaGCAAGAGGTGAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCQCKGN*QEVSKC
Trigger: ACATTTGCTCACCTCTTGCCAGTTACCTTTGCATTG...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTCTTCTTGGAATCCTTaGAGGTTTAGACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCSSWNP*RFRLHS
Trigger: AGAATGGAGTCTAAACCTTCAAGGATTCCAAGAAGA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTCTTGAGCGTGCTCCCTaGGTTATCTCAGATTCACTA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGLERAP*VISDSL
Trigger: TAGTGAATCTGAGATAACTCAGGGAGCACGCTCAAG...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGGTCTTTTTGAATCATaGTCCCGTTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGGLFES*SRCWFC
Trigger: GCAGAACCAGCAACGGGATCATGATTCAAAAAGACC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAAGTTTAGGTCTTTTTaGATCATGATCCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCKFRSF*IMIPLL
Trigger: CAGCAACGGGATCATGATTCAAAAAGACCTAAACTT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTTTCTGAATTGCTTATaGTTGGGGCTTCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCFLNCL*LGLHLY
Trigger: GTAGAGATGAAGCCCCAATCATAAGCAATTCAGAAA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGCTAGAAGCTATGCGTaGCAGCAATCTCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPARSYA*QQSPRC
Trigger: ACAACGAGGAGATTGCTGTCACGCATAGCTTCTAGC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATATTACTACGGGACTGTaGAGCTGTCAAGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNITTGL*SCQDSW
Trigger: CCAAGAATCTTGACAGCTTCACAGTCCCGTAGTAAT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGGGAACTTCAGAAGCTaGTGGTACATTACTACGGGA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGGNFRS*WYITTG
Trigger: TCCCGTAGTAATGTACCATCAGCTTCTGAAGTTCCC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATAGAAATCGAAATCCCTaGGAAGCTTCAGATGCCCTA +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNRNRNP*EASDAL
Trigger: TAGGGCATCTGAAGCTTCTCAGGGATTTCGATTTCT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATTCTGTGCTTCAAGGTaGACCACTTCATTTGATTCT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTFCASR*TTSFDS
Trigger: AGAATCAAATGAAGTGGTTCACCTTGAAGCACAGAA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACACCTTGAGCCGAATCTaGTGTAGAGCCACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHTLSRI*CRATCC
Trigger: ACAACAGGTGGCTCTACATCAGATTCGGCTCAAGGT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTACCTTGAGCCGAATCTaGTGTAGAGCCACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPTLSRI*CRATCC
Trigger: ACAACAGGTGGCTCTACATCAGATTCGGCTCAAGGT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTCTTTCTGGATCTCTTaGAGGCGCACTTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCSFWIS*RRTFSF
Trigger: AAAACTAAAAGTGCGCCTTCAAGAGATCCAGAAAGA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAGATGCAGCTGCCATTTaGCAAATTCTACATAAGTCA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTDAAAI*QILHKS
Trigger: TGACTTATGTAGAATTTGTCAAATGGCAGCTGCATC...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTGCTCTATGTAGTTCATaGATATCAAAATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCALCSS*ISKSSR
Trigger: CCTGGAGGATTTTGATATTCATGAACTACATAGAGC...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAACTATCTCACTAGCTTaGCTAATGGCAACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTTISLA*LMATKF
Trigger: GAACTTTGTTGCCATTAGTCAAGCTAGTGAGATAGT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAAGCATGTTACTGTGCTaGATACTGCAGACAATTGTA +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSMLLC*ILQTIV
Trigger: TACAATTGTCTGCAGTATTCAGCACAGTAACATGCT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACCACCTGTTGTGGCACTaGTTGATGCTGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHHLLWH*LMLQML
Trigger: AAGCATCTGCAGCATCAAGCAGTGCCACAACAGGTG...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATGCCTGAAGAGTTCTTaGAAGGTTAATAAATCGGAC +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTCLKSS*KVNKSD
Trigger: GTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTCTTGGTCTCCCAAAGTaGTGGGATTACATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPLGLPK*WDYMRE
Trigger: CTCACGCATGTAATCCCAGCACTTTGGGAGACCAAG...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCTCCAATCTCCGCCTTaGAGGTTTTCAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNLQSPP*RFSSNS
Trigger: AGAATTGCTTGAAAACCTGCAAGGCGGAGATTGGAG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATCAGAAGGCAATTGGTaGTTTGTGGATGATGTATTC +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTSEGNW*FVDDVF
Trigger: GAATACATCATCCACAAACCACCAATTGCCTTCTGA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTATTACTCCCAAGTGCTaGAGGGACTGCAAACCGGAA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPITPKC*RDCKPE
Trigger: TTCCGGTTTGCAGTCCCTCCAGCACTTGGGAGTAAT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
3UTR CAA 72 bp CTTGTATTTACACAAACCCAGATGGTAGAGCCTATTTaGTCCCAAACCTACACAGCATGTTACTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LVFTQTQMVEPI*SQTYTACYCAE
Trigger: TTCAGCACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTGTGTAAATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACCTTGAGCGTGCTCCCTaGGTTATCTCAGATTCACTA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHLERAP*VISDSL
Trigger: TAGTGAATCTGAGATAACTCAGGGAGCACGCTCAAG...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGGTCTTTTTGAATCATaGTCCCGTTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHGLFES*SRCWFC
Trigger: GCAGAACCAGCAACGGGATCATGATTCAAAAAGACC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATGAAGATCTAGGAACTTaGCTATGCCTCCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNEDLGT*LCLQDE
Trigger: TTCATCTTGGAGGCATAGTCAAGTTCCTAGATCTTC...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCATATGATGAAGTTGTaGAATCACCACTTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNHMMKL*NHHFGD
Trigger: GTCACCGAAGTGGTGATTTCACAACTTCATCATATG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTATTACTACGGGACTGTaGAGCTGTCAAGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGITTGL*SCQDSW
Trigger: CCAAGAATCTTGACAGCTTCACAGTCCCGTAGTAAT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGGGAACTTCAGAAGCTaGTGGTACATTACTACGGGA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPGNFRS*WYITTG
Trigger: TCCCGTAGTAATGTACCATCAGCTTCTGAAGTTCCC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACATTGTGGCTAAGAGATaGCAAACCCCATCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHIVAKR*QTPSSP
Trigger: AGGCGAAGATGGGGTTTGTCATCTCTTAGCCACAAT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAGAGGTAGGTATCCTTaGAGATTCATCTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGRGRYP*RFISSL
Trigger: GAGGGAAGAGATGAATCTTCAAGGATACCTACCTCT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATTCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNSSICA*RVLARL
Trigger: TAACCTTGCAAGAACTCTTCAGGCACATATGGAAGA...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTCTTGGTGGACATACTaGAAACTTCCTGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGSWWTY*KLPVHL
Trigger: CAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTTCAAGCAATTCTCCTaGCTCAGCCTCCTTAGTAGC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPFKQFS*LSLLSS
Trigger: GCTACTAAGGAGGCTGAGGCAGGAGAATTGCTTGAA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTACATAGTTCACAGGTaGTTACAGCTTCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCYIVHR*LQLLMK
Trigger: CTTCATTAGAAGCTGTAACCACCTGTGAACTATGTA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTCTATACCATGCAGATTaGAATGGTGACGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPLYHAD*NGDADA
Trigger: AGCATCTGCGTCACCATTTCAATCTGCATGGTATAG...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAACATTTCTCCCAGCTaGGGTAGTACAGTTTGTACA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGNISPS*GSTVCT
Trigger: TGTACAAACTGTACTACCTCAGCTGGGAGAAATGTT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGAACTTAGTATGGTCTaGTGTTCAGAAGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGELSMV*CSEGNW
Trigger: CCAATTGCCTTCTGAACATCAGACCATACTAAGTTC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACAGAAATCGAAATCCCTaGGAAGCTTCAGATGCCCTA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHRNRNP*EASDAL
Trigger: TAGGGCATCTGAAGCTTCTCAGGGATTTCGATTTCT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAGAAATCGAAATCCCTaGGAAGCTTCAGATGCCCTA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPRNRNP*EASDAL
Trigger: TAGGGCATCTGAAGCTTCTCAGGGATTTCGATTTCT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTCTGACTCAGAGCTATaGTTGTGGCTAAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSDSEL*LWLRDD
Trigger: GTCATCTCTTAGCCACAATCATAGCTCTGAGTCAGA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAGAGGTAGGTATCCTTaGAGATTCATCTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPRGRYP*RFISSL
Trigger: GAGGGAAGAGATGAATCTTCAAGGATACCTACCTCT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGTATTTCTTCCACCTTaGGCCGAATCTGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHVFLPP*AESDVE
Trigger: CTCTACATCAGATTCGGCTCAAGGTGGAAGAAATAC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACATCCAGGCTGCGTATTaGTTCGGGAAGATTCTGATT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHIQAAY*FGKILI
Trigger: AATCAGAATCTTCCCGAAGCAATACGCAGCCTGGAT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACCTGAGAAGCTTCAGATaGCCTATTATCGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHLRSFR*PIIGNF
Trigger: GAAGTTCCCGATAATAGGGCATCTGAAGCTTCTCAG...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAACTTCCTGTGCACTTaGATGGCTCTATCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGNFLCT*MALSAN
Trigger: ATTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACACTGCAAACTTCCTGTaGACTTGCATGGCTCTATCA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHTANFL*TCMALS
Trigger: TGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTCTTGGTGGACATACTaGAAACTTCCTGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSWWTY*KLPVHL
Trigger: CAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTCTTGGTGGACATACTaGAAACTTCCTGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSWWTY*KLPVHL
Trigger: CAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTCTCCAATCTCCGCCTTaGAGGTTTTCAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPLQSPP*RFSSNS
Trigger: AGAATTGCTTGAAAACCTGCAAGGCGGAGATTGGAG...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAGCTGTCAAGATTCTTaGAGAAACGTAAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCSCQDS*RNVRIF
Trigger: GAAAATTCTTACGTTTCTCCAAGAATCTTGACAGCT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATTTCATACAGTCTTGGTaGACATACTGCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNFIQSW*TYCKLP
Trigger: AGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAA...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATTTTTCATACAGTCTTaGTGGACATACTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTFFIQS*WTYCKL
Trigger: AAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTTTTTCATACAGTCTTaGTGGACATACTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: QTQMVEPILSQTYTACYCFFIQS*WTYCKL
Trigger: AAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTCGGACACGTGTGCTTaGTTCATTTGTATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGSDTCA*FICISH
Trigger: ATGGGAAATACAAATGAACCAAGCACACGTGTCCGA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTCAAATGTCCTGTTATaGTCTCCGTCTTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGSNVLL*SPSSSE
Trigger: TTCCGAAGAAGACGGAGACCATAACAGGACATTTGA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTCAATGCAAAGGTAACTaGCAAGAGGTGAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGQCKGN*QEVSKC
Trigger: ACATTTGCTCACCTCTTGCCAGTTACCTTTGCATTG...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTCTTCTTGGAATCCTTaGAGGTTTAGACTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGSSWNP*RFRLHS
Trigger: AGAATGGAGTCTAAACCTTCAAGGATTCCAAGAAGA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAAGTTTAGGTCTTTTTaGATCATGATCCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGKFRSF*IMIPLL
Trigger: CAGCAACGGGATCATGATTCAAAAAGACCTAAACTT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAACATTTCTCCCAGCTaGGGTAGTACAGTTTGTACA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPNISPS*GSTVCT
Trigger: TGTACAAACTGTACTACCTCAGCTGGGAGAAATGTT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACAACATTTCTCCCAGCTaGGGTAGTACAGTTTGTACA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHNISPS*GSTVCT
Trigger: TGTACAAACTGTACTACCTCAGCTGGGAGAAATGTT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGGCTTCATCTCTACTTaGACTGTAAGAAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHGFIST*TVRKSR
Trigger: CCTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATGTATTCAAGGAATCCTaGCTAGATCTTCGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNVFKES*LDLREK
Trigger: TTTTTCACGAAGATCTAGTCAGGATTCCTTGAATAC...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTCTTTCTGGATCTCTTaGAGGCGCACTTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGSFWIS*RRTFSF
Trigger: AAAACTAAAAGTGCGCCTTCAAGAGATCCAGAAAGA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGATGCAGCTGCCATTTaGCAAATTCTACATAAGTCA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGDAAAI*QILHKS
Trigger: TGACTTATGTAGAATTTGTCAAATGGCAGCTGCATC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAATTGTACCACTCCTTaGAGAACTACAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPNCTTP*RTTGTV
Trigger: TACTGTGCCTGTAGTTCTTCAAGGAGTGGTACAATT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAACTTCCTGTGCACTTaGATGGCTCTATCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPNFLCT*MALSAN
Trigger: ATTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR GCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGAGATCTTCCATATGTaGCTGAAGAGTTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHEIFHM*LKSSCK
Trigger: CTTGCAAGAACTCTTCAGGCACATATGGAAGATCTC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGAAGTCGGACACGTGTaGTTGGTTCATTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPEVGHV*LVHLYF
Trigger: GAAATACAAATGAACCAAGCACACGTGTCCGACTTC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539065.5
CDS-3UTR CCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTCCTGTGCACTTGCATaGCTCTATCAGCAAATTAGA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSCALA*LYQQIR
Trigger: TCTAATTTGCTGATAGAGCCATGCAAGTGCACAGGA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTCCTGTGCACTTGCATaGCTCTATCAGCAAATTAGA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSCALA*LYQQIR
Trigger: TCTAATTTGCTGATAGAGCCATGCAAGTGCACAGGA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTCAAATGTCCTGTTATaGTCTCCGTCTTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSNVLL*SPSSSE
Trigger: TTCCGAAGAAGACGGAGACCATAACAGGACATTTGA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGATGCTGATGTAGACTaGTATTCAGAATCCAATCTA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGDADVD*YSESNL
Trigger: TAGATTGGATTCTGAATATCAGTCTACATCAGCATC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAAGTTTAGGTCTTTTTaGATCATGATCCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPKFRSF*IMIPLL
Trigger: CAGCAACGGGATCATGATTCAAAAAGACCTAAACTT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGAAGGAACTCTGTCTTaGACATATGATGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHEGTLS*TYDEVV
Trigger: CACAACTTCATCATATGTTCAAGACAGAGTTCCTTC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGAAGGAACTCTGTCTTaGACATATGATGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPEGTLS*TYDEVV
Trigger: CACAACTTCATCATATGTTCAAGACAGAGTTCCTTC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTTTCTGAATTGCTTATaGTTGGGGCTTCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHFLNCL*LGLHLY
Trigger: GTAGAGATGAAGCCCCAATCATAAGCAATTCAGAAA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTTTCTGAATTGCTTATaGTTGGGGCTTCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPFLNCL*LGLHLY
Trigger: GTAGAGATGAAGCCCCAATCATAAGCAATTCAGAAA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGTATTCAAGGAATCCTaGCTAGATCTTCGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGVFKES*LDLREK
Trigger: TTTTTCACGAAGATCTAGTCAGGATTCCTTGAATAC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTTCTGTGCTTCAAGGTaGACCACTTCATTTGATTCT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPFCASR*TTSFDS
Trigger: AGAATCAAATGAAGTGGTTCACCTTGAAGCACAGAA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTCTTTCTGGATCTCTTaGAGGCGCACTTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSFWIS*RRTFSF
Trigger: AAAACTAAAAGTGCGCCTTCAAGAGATCCAGAAAGA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGATGCAGCTGCCATTTaGCAAATTCTACATAAGTCA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPDAAAI*QILHKS
Trigger: TGACTTATGTAGAATTTGTCAAATGGCAGCTGCATC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGCTCTATGTAGTTCATaGATATCAAAATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPALCSS*ISKSSR
Trigger: CCTGGAGGATTTTGATATTCATGAACTACATAGAGC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACAGTATACACAACTCATaGCCACACAGTATAGATCCA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSIHNS*PHSIDP
Trigger: TGGATCTATACTGTGTGGTCATGAGTTGTGTATACT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGTAACTGGCAAGAGGTaGGCAAATGTTTTAGAACAT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPVTGKR*ANVLEH
Trigger: ATGTTCTAAAACATTTGCTCACCTCTTGCCAGTTAC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTGGTCCATTACTGACTaGAGTATACTGTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPWSITD*SILSRS
Trigger: ACTTCTAGACAGTATACTTCAGTCAGTAATGGACCA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTGGTCCATTACTGACTaGAGTATACTGTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHWSITD*SILSRS
Trigger: ACTTCTAGACAGTATACTTCAGTCAGTAATGGACCA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR TCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAGCATGTTACTGTGCTaGATACTGCAGACAATTGTA +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSMLLC*ILQTIV
Trigger: TACAATTGTCTGCAGTATTCAGCACAGTAACATGCT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTGCCTGAAGAGTTCTTaGAAGGTTAATAAATCGGAC +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPCLKSS*KVNKSD
Trigger: GTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTCCAGAATGTAGAAACTaGTTTCTTCAACATCTTGGT +
Preference number: 4 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGPECRN*FLQHLG
Trigger: ACCAAGATGTTGAAGAAAGCAGTTTCTACATTCTGG...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR GCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTACACAAGCACAAGCATaGTCTGTAAGAGCTTTACAT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPTQAQA*SVRALH
Trigger: ATGTAAAGCTCTTACAGAGCATGCTTGTGCTTGTGT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATAGCTGTCAAGATTCTTaGAGAAACGTAAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNSCQDS*RNVRIF
Trigger: GAAAATTCTTACGTTTCTCCAAGAATCTTGACAGCT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTTCATACAGTCTTGGTaGACATACTGCAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPFIQSW*TYCKLP
Trigger: AGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGATGCTGATGTAGACTaGTATTCAGAATCCAATCTA +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHDADVD*YSESNL
Trigger: TAGATTGGATTCTGAATATCAGTCTACATCAGCATC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR TCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGAAGGAACTCTGTCTTaGACATCTGATAATGTGTTT +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHEGTLS*TSDNVF
Trigger: AAACACATTATCAGATGTTCAAGACAGAGTTCCTTC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539065.5
CDS-3UTR CCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTACATAGTTCACAGGTaGTTACAGCTTCTAATGAAG +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHYIVHR*LQLLMK
Trigger: CTTCATTAGAAGCTGTAACCACCTGTGAACTATGTA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACAGCTGTCAAGATTCTTaGAGAAACGTAAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSCQDS*RNVRIF
Trigger: GAAAATTCTTACGTTTCTCCAAGAATCTTGACAGCT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CCA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTTTTTCATACAGTCTTaGTGGACATACTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPFFIQS*WTYCKL
Trigger: AAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS TCA 90 bp GCAGCAACACGCACCGCCGCCTTTCTCCTTGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGGCAGCGAAGCACAATGGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: AATRTAAFLLGVLGP*LRKCSRQRSTMAPA
Trigger: GGCGGGCGCCATTGTGCTTCGCTGCCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGTGCGTGTTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421037.1
ENST00000473749.1
CDS CCA 90 bp AGTGCGCGTCCCACTCGCAGCAACACGCACCGCCGCCTTTCTCCTTaGAGTTCTAGGCCCGTGACTGAGGAAATGCAGTCGGCAGCGAAG +
Preference number: 5 (lower is better)
Translates to: SARPTRSNTHRRLSP*SSRPVTEEMQSAAK
Trigger: CTTCGCTGCCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGTGCGTGTTGCTGCGAGTGGGACGCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421037.1
ENST00000473749.1
CDS TCA 90 bp CAAATCATGAATTCCGCCGCCTTTCTCCTTGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGGCAGCGAAGCACAATGGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: QIMNSAAFLLGVLGP*LRKCSRQRSTMAPA
Trigger: GGCGGGCGCCATTGTGCTTCGCTGCCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGAATTCATGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTGCTGGTTCTGCGATCTaGAGCGTGCTCCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: QTQMVEPILSQTYTACYCAGSAI*SVLPEL
Trigger: TAACTCAGGGAGCACGCTCAAGATCGCAGAACCAGC...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS TCA 90 bp AAGGAACCAGGAAGAATCCCTGATATTCCTGTATTTCTTCCACCTTaGGCCGAATCTGATGTAGAGCCACCTGTTGTGGCACTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: KEPGRIPDIPVFLPP*AESDVEPPVVALLD
Trigger: ATCAAGCAGTGCCACAACAGGTGGCTCTACATCAGATTCGGCTCAAGGTGGAAGAAATACAGGAATATCAGGGATTCTTCCTGGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTACAGCAATCTCCTCGTaGTCCGCCTACCTTCATTGT +
Preference number: 5 (lower is better)
Translates to: QTQMVEPILSQTYTACYCTAISS*SAYLHC
Trigger: ACAATGAAGGTAGGCGGACAACGAGGAGATTGCTGT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAACAGCAATCTCCTCGTaGTCCGCCTACCTTCATTGT +
Preference number: 5 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTTAISS*SAYLHC
Trigger: ACAATGAAGGTAGGCGGACAACGAGGAGATTGCTGT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS TCA 90 bp CTAAGAGATGACAAACCCCATCTTCGCCTAAGAAATCGAAATCCCTaGGAAGCTTCAGATGCCCTATTATCGGGAACTTCAGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LRDDKPHLRLRNRNP*EASDALLSGTSEAD
Trigger: ATCAGCTTCTGAAGTTCCCGATAATAGGGCATCTGAAGCTTCTCAGGGATTTCGATTTCTTAGGCGAAGATGGGGTTTGTCATCTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS CCA 90 bp CCAGAGTTAATTTTGGCCTGTAACCACTTTTTCATACAGTCTTGGTaGACATACTGCAAACTTCCTGTGCACTTGCATGGCTCTATCAGC +
Preference number: 5 (lower is better)
Translates to: PELILACNHFFIQSW*TYCKLPVHLHGSIS
Trigger: GCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACAGGCCAAAATTAACTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGCTGGTTCTGCGATCTaGAGCGTGCTCCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPAGSAI*SVLPEL
Trigger: TAACTCAGGGAGCACGCTCAAGATCGCAGAACCAGC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS TCA 90 bp TCTTCGGAATCATCCTCTGAAGTTTCGAGATCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTAATAAATCGGACACGTGTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: SSESSSEVSRSSICA*RVLARLINRTRVLG
Trigger: ACCAAGCACACGTGTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCGAAACTTCAGAGGATGATTCCGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000478396.1
CDS CCA 90 bp GAACCAGAGTTAATTTTGGCCTGTAACCACTTTTTCATACAGTCTTaGTGGACATACTGCAAACTTCCTGTGCACTTGCATGGCTCTATC +
Preference number: 5 (lower is better)
Translates to: EPELILACNHFFIQS*WTYCKLPVHLHGSI
Trigger: GATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACAGGCCAAAATTAACTCTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS-3UTR CAA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAATTACACAGGCAGGCTaGTTTACTACATCCAGAATG +
Preference number: 5 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTITQAG*FTTSRM
Trigger: CATTCTGGATGTAGTAAACAAGCCTGCCTGTGTAAT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTAAATTGTACCACTCCTaGAAGAACTACAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: QTQMVEPILSQTYTACYCKLYHS*KNYRHS
Trigger: ACTGTGCCTGTAGTTCTTCAAGGAGTGGTACAATTT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACAAAGGCAATTGGTGGTTaGTGGATGATGTATTCAACT +
Preference number: 5 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTKAIGG*WMMYST
Trigger: AGTTGAATACATCATCCACAAACCACCAATTGCCTT...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAATCCAGGCTGCGTATaGCTTCGGGAAGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGNPGCV*LREDSD
Trigger: ATCAGAATCTTCCCGAAGCAATACGCAGCCTGGATT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTACAGCAATCTCCTCGTaGTCCGCCTACCTTCATTGT +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPTAISS*SAYLHC
Trigger: ACAATGAAGGTAGGCGGACAACGAGGAGATTGCTGT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTACTCAGCTTGTTCATTaGCATGAGCTCTATGTAGTT +
Preference number: 5 (lower is better)
Translates to: QTQMVEPILSQTYTACYCTQLVH*HELYVV
Trigger: AACTACATAGAGCTCATGCAAATGAACAAGCTGAGT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATATCGGACACGTGTGCTaGGTTCATTTGTATTTCCCA +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNIGHVC*VHLYFP
Trigger: TGGGAAATACAAATGAACCAAGCACACGTGTCCGAT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGTCGGACACGTGTGCTaGGTTCATTTGTATTTCCCA +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGVGHVC*VHLYFP
Trigger: TGGGAAATACAAATGAACCAAGCACACGTGTCCGAC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539065.5
CDS GCA 90 bp ATTTTGGCCTGTAACCACTTTTTCATACAGTCTTGGTGGACATACTaGAAACTTCCTGTGCACTTGCATGGCTCTATCAGCAAATTAGAT +
Preference number: 5 (lower is better)
Translates to: ILACNHFFIQSWWTY*KLPVHLHGSISKLD
Trigger: ATCTAATTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACAGGCCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTACTGTAAAGTGCTCATaGAGTTTTCTTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QTQMVEPILSQTYTACYCTVKCS*SFLLVL
Trigger: CAAGACCAAAAGAAAACTCAATGAGCACTTTACAGT...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAATCCAGGCTGCGTATaGCTTCGGGAAGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPNPGCV*LREDSD
Trigger: ATCAGAATCTTCCCGAAGCAATACGCAGCCTGGATT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACAATCCAGGCTGCGTATaGCTTCGGGAAGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHNPGCV*LREDSD
Trigger: ATCAGAATCTTCCCGAAGCAATACGCAGCCTGGATT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATGGGCTTCATCTCTACTaGAACTGTAAGAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNGLHLY*NCKKIQ
Trigger: CTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCCC...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATACTGTGATCATGACATaGTCGGTCAAATTACTCCCA +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNTVIMT*SVKLLP
Trigger: TGGGAGTAATTTGACCGACAATGTCATGATCACAGT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACCCAGATGGTAGAGCCTATTTTGTCCCAAACCTACACAGCATGTTACTGTTACTATCTCACTAGCTaGACTAATGGCAACAAAGTT +
Preference number: 5 (lower is better)
Translates to: QTQMVEPILSQTYTACYCYYLTS*TNGNKV
Trigger: AACTTTGTTGCCATTAGTCAAGCTAGTGAGATAGTA...ACAGTAACATGCTGTGTAGGTTTGGGACAAAATAGGCTCTACCATCTGGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp GTTTTATTGGGCAGTGCTGCTCTTAAATCCTACCTTCCACTCAACTCCCATACATGTGTGAAAATCAGCTaGTATTTACACAAACCCAGA +
Preference number: 5 (lower is better)
Translates to: VLLGSAALKSYLPLNSHTCVKIS*YLHKPR
Trigger: TCTGGGTTTGTGTAAATACAAGCTGATTTTCACACA...TGTATGGGAGTTGAGTGGAAGGTAGGATTTAAGAGCAGCACTGCCCAATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS TCA 90 bp TTGCATGGCTCTATCAGCAAATTAGATGATGATGCAGCTGCCATTTaGCAAATTCTACATAAGTCACCTTCTTCTTCTTCTGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LHGSISKLDDDAAAI*QILHKSPSSSSESS
Trigger: AGAGGACTCAGAAGAAGAAGAAGGTGACTTATGTAGAATTTGTCAAATGGCAGCTGCATCATCATCTAATTTGCTGATAGAGCCATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000461582.1
ENST00000539065.5
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATAAGGCAATTGGTGGTTaGTGGATGATGTATTCAACT +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNKAIGG*WMMYST
Trigger: AGTTGAATACATCATCCACAAACCACCAATTGCCTT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTGGGCTTCATCTCTACTaGAACTGTAAGAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGGLHLY*NCKKIQ
Trigger: CTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCCC...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTACAACCCTTTCTGAATaGCTTATGATTGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGTTLSE*LMIGAS
Trigger: TGAAGCCCCAATCATAAGCAATTCAGAAAGGGTTGT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTACTGTGATCATGACATaGTCGGTCAAATTACTCCCA +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGTVIMT*SVKLLP
Trigger: TGGGAGTAATTTGACCGACAATGTCATGATCACAGT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAAACTTCCTGTGCACTaGCATGGCTCTATCAGCAAA +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPKLPVH*HGSISK
Trigger: TTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACAAACTTCCTGTGCACTaGCATGGCTCTATCAGCAAA +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHKLPVH*HGSISK
Trigger: TTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCTTTTTCATACAGTCTaGGTGGACATACTGCAAACT +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNLFHTV*VDILQT
Trigger: AGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATACTCAGCTTGTTCATTaGCATGAGCTCTATGTAGTT +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNTQLVH*HELYVV
Trigger: AACTACATAGAGCTCATGCAAATGAACAAGCTGAGT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATAAACTCATACTCAGCTaGTTCATTTGCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNKLILS*FICMSS
Trigger: AGAGCTCATGCAAATGAACAAGCTGAGTATGAGTTT...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTATCGGACACGTGTGCTaGGTTCATTTGTATTTCCCA +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPIGHVC*VHLYFP
Trigger: TGGGAAATACAAATGAACCAAGCACACGTGTCCGAT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTATTACACAGGCAGGCTaGTTTACTACATCCAGAATG +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGITQAG*FTTSRM
Trigger: CATTCTGGATGTAGTAAACAAGCCTGCCTGTGTAAT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS TCA 90 bp CTTGAAATGGTCTTTGAGATGAAACAACCCTTTCTGAATTGCTTATaGTTGGGGCTTCATCTCTACTTGAACTGTAAGAAAATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LEMVFEMKQPFLNCL*LGLHLYLNCKKIQA
Trigger: AGCCTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCCCCAATCATAAGCAATTCAGAAAGGGTTGTTTCATCTCAAAGACCATTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS GCA 90 bp CAGAAGGCAATTGGTGGTTTGTGGATGATGTATTCAACTGTAAAGTaGTCATTGAGTTTTCTTTTGGTCTTGCTCCTTGTGAATATGAAG +
Preference number: 5 (lower is better)
Translates to: QKAIGGLWMMYSTVK*SLSFLLVLLLVNMK
Trigger: CTTCATATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGAGCACTTTACAGTTGAATACATCATCCACAAACCACCAATTGCCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS GCA 90 bp GGGCTTCATCTCTACTTGAACTGTAAGAAAATCCAGGCTGCGTATTaGTTCGGGAAGATTCTGATTCTCTTGAAGAAAAATTTGATCTTA +
Preference number: 5 (lower is better)
Translates to: GLHLYLNCKKIQAAY*FGKILILLKKNLIL
Trigger: TAAGATCAAATTTTTCTTCAAGAGAATCAGAATCTTCCCGAAGCAATACGCAGCCTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATTCATTGAGTTTTCTTTaGGTCTTGCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNSLSFL*VLLLVN
Trigger: ATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGA...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAAGGCAATTGGTGGTTaGTGGATGATGTATTCAACT +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGKAIGG*WMMYST
Trigger: AGTTGAATACATCATCCACAAACCACCAATTGCCTT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGGGCTTCATCTCTACTaGAACTGTAAGAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPGLHLY*NCKKIQ
Trigger: CTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCCC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTACAACCCTTTCTGAATaGCTTATGATTGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPTTLSE*LMIGAS
Trigger: TGAAGCCCCAATCATAAGCAATTCAGAAAGGGTTGT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACACAACCCTTTCTGAATaGCTTATGATTGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHTTLSE*LMIGAS
Trigger: TGAAGCCCCAATCATAAGCAATTCAGAAAGGGTTGT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp AATGTCAATATTGAACACTACCCTGGAATTCCTGCCTGGTTTTCCTACCCAAATCAGAATTCAATGATCTaGTATTCAAGGAATCCTGAC +
Preference number: 5 (lower is better)
Translates to: NVNIEHYPGIPAWFSYPNQNSMI*YSRNPD
Trigger: GTCAGGATTCCTTGAATACAAGATCATTGAATTCTG...ATTTGGGTAGGAAAACCAGGCAGGAATTCCAGGGTAGTGTTCAATATTGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTAAACTCATACTCAGCTaGTTCATTTGCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGKLILS*FICMSS
Trigger: AGAGCTCATGCAAATGAACAAGCTGAGTATGAGTTT...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGTCAGAGAAATATATTaGAGGGCAGGAAAAACCAGC +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPVREIY*RAGKTS
Trigger: GCTGGTTTTTCCTGCCCTCAAATATATTTCTCTGAC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTCAGAATTCAATGATCTaGTATTCAAGGAATCCTGAC +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGQNSMI*YSRNPD
Trigger: GTCAGGATTCCTTGAATACAAGATCATTGAATTCTG...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACCTTTTTCATACAGTCTaGGTGGACATACTGCAAACT +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHLFHTV*VDILQT
Trigger: AGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAG...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTCTTTTTCATACAGTCTaGGTGGACATACTGCAAACT +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPLFHTV*VDILQT
Trigger: AGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAG...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACACTCAGCTTGTTCATTaGCATGAGCTCTATGTAGTT +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHTQLVH*HELYVV
Trigger: AACTACATAGAGCTCATGCAAATGAACAAGCTGAGT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTAAACTCATACTCAGCTaGTTCATTTGCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPKLILS*FICMSS
Trigger: AGAGCTCATGCAAATGAACAAGCTGAGTATGAGTTT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CCACACAGTATAGATCCATTCATGGTGAATAATGTTCATCTGTTCTCCAAAGGTTGTGTGAAAATCAGCTaGTATTTACACAAACCCAGA +
Preference number: 5 (lower is better)
Translates to: PHSIDPFMVNNVHLFSKGCVKIS*YLHKPR
Trigger: TCTGGGTTTGTGTAAATACAAGCTGATTTTCACACA...ACCTTTGGAGAACAGATGAACATTATTCACCATGAATGGATCTATACTGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTTCATTGAGTTTTCTTTaGGTCTTGCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPSLSFL*VLLLVN
Trigger: ATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGA...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTCATTGAGTTTTCTTTaGGTCTTGCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHSLSFL*VLLLVN
Trigger: ATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACACTGTAAAGTGCTCATaGAGTTTTCTTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHTVKCS*SFLLVL
Trigger: CAAGACCAAAAGAAAACTCAATGAGCACTTTACAGT...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTACTGTAAAGTGCTCATaGAGTTTTCTTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPTVKCS*SFLLVL
Trigger: CAAGACCAAAAGAAAACTCAATGAGCACTTTACAGT...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000539065.5
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACGTAAAGCTTAAGCCATaGTTATCACTGTCATTTAGC +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHVKLKP*LSLSFS
Trigger: GCTAAATGACAGTGATAACAATGGCTTAAGCTTTAC...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp CAAACTAAGTGTGGGCAAACTGTTCAATCACTTTTGAGAAATTACATGGTTCCTGTAAAGCTTAAGCCATaGTTATCACTGTCATTTAGC +
Preference number: 5 (lower is better)
Translates to: QTKCGQTVQSLLRNYMVPVKLKP*LSLSFS
Trigger: GCTAAATGACAGTGATAACAATGGCTTAAGCTTTAC...AGGAACCATGTAATTTCTCAAAAGTGATTGAACAGTTTGCCCACACTTAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS-3UTR CAA 90 bp GTACTGACAGAAGAAAAATACAGTGTTATGGAAGTATACACAACTCATGACCACTACTATCTCACTAGCTaGACTAATGGCAACAAAGTT +
Preference number: 5 (lower is better)
Translates to: VLTEEKYSVMEVYTTHDHYYLTS*TNGNKV
Trigger: AACTTTGTTGCCATTAGTCAAGCTAGTGAGATAGTA...GTGGTCATGAGTTGTGTATACTTCCATAACACTGTATTTTTCTTCTGTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000409175.6
CDS TCA 90 bp TCTGTTCCAAATGATCCAAGTACCATTGATGAAGATCTAGGAACTTaGCTATGCCTCCAAGATGAATCTGATAATGTGTTTAAACCATTT +
Preference number: 5 (lower is better)
Translates to: SVPNDPSTIDEDLGT*LCLQDESDNVFKPF
Trigger: AAATGGTTTAAACACATTATCAGATTCATCTTGGAGGCATAGTCAAGTTCCTAGATCTTCATCAATGGTACTTGGATCATTTGGAACAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
CDS CCA 72 bp CCCACTCGCAGCAACACGCACCGCCGCCTTTCTCCTTaGAGTTCTAGGCCCGTGACTGAGGAAATGCAGTCG +
Preference number: 6 (lower is better)
Translates to: PTRSNTHRRLSP*SSRPVTEEMQS
Trigger: CGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGTGCGTGTTGCTGCGAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421037.1
ENST00000473749.1
CDS TCA 72 bp CGCACCGCCGCCTTTCTCCTTGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGGCAGCGAAGCACAATG +
Preference number: 6 (lower is better)
Translates to: RTAAFLLGVLGP*LRKCSRQRSTM
Trigger: CATTGTGCTTCGCTGCCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421037.1
ENST00000473749.1
CDS TCA 72 bp AATTCCGCCGCCTTTCTCCTTGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGGCAGCGAAGCACAATG +
Preference number: 6 (lower is better)
Translates to: NSAAFLLGVLGP*LRKCSRQRSTM
Trigger: CATTGTGCTTCGCTGCCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS TCA 72 bp TTTTTCGCCGCCTTTCTCCTTGGAGTTCTAGGCCCGTaGCTGAGGAAATGCAGTCGGCAGCGAAGCACAATG +
Preference number: 6 (lower is better)
Translates to: FFAAFLLGVLGP*LRKCSRQRSTM
Trigger: CATTGTGCTTCGCTGCCGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259050.8
ENST00000539065.5
CDS CCA 72 bp ACAGGAACAAATCATGAATTCCGCCGCCTTTCTCCTTaGAGTTCTAGGCCCGTGACTGAGGAAATGCAGTCG +
Preference number: 6 (lower is better)
Translates to: TGTNHEFRRLSP*SSRPVTEEMQS
Trigger: CGACTGCATTTCCTCAGTCACGGGCCTAGAACTCCAAGGAGAAAGGCGGCGGAATTCATGATTTGTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS TCA 72 bp GGAAGAATCCCTGATATTCCTGTATTTCTTCCACCTTaGGCCGAATCTGATGTAGAGCCACCTGTTGTGGCA +
Preference number: 6 (lower is better)
Translates to: GRIPDIPVFLPP*AESDVEPPVVA
Trigger: TGCCACAACAGGTGGCTCTACATCAGATTCGGCTCAAGGTGGAAGAAATACAGGAATATCAGGGATTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS CAA 90 bp GCTGAATTCCAACCTGAAGGAATAATATCTACTGTGATCATGACATaGTCGGTCAAATTACTCCCAAGTGCTGGAGGGACTGCAAACCGG +
Preference number: 6 (lower is better)
Translates to: AEFQPEGIISTVIMT*SVKLLPSAGGTANR
Trigger: CCGGTTTGCAGTCCCTCCAGCACTTGGGAGTAATTTGACCGACAATGTCATGATCACAGTAGATATTATTCCTTCAGGTTGGAATTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS TCA 72 bp GACAAACCCCATCTTCGCCTAAGAAATCGAAATCCCTaGGAAGCTTCAGATGCCCTATTATCGGGAACTTCA +
Preference number: 6 (lower is better)
Translates to: DKPHLRLRNRNP*EASDALLSGTS
Trigger: TGAAGTTCCCGATAATAGGGCATCTGAAGCTTCTCAGGGATTTCGATTTCTTAGGCGAAGATGGGGTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS GCA 72 bp AGGGCAGGAAAAACCAGCTCTGACCATGTAAGTTCATaGCAGGGCAGAAAGCATTCAATGTATGTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: RAGKTSSDHVSS*QGRKHSMYVSA
Trigger: AGCTGAAACATACATTGAATGCTTTCTGCCCTGGCATGAACTTACATGGTCAGAGCTGGTTTTTCCTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS TCA 72 bp CAGTTTGTACAGGAAAGTTTAGGTCTTTTTGAATCATaGTCCCGTTGCTGGTTCTGCGATCTTGAGCGTGCT +
Preference number: 6 (lower is better)
Translates to: QFVQESLGLFES*SRCWFCDLERA
Trigger: AGCACGCTCAAGATCGCAGAACCAGCAACGGGATCATGATTCAAAAAGACCTAAACTTTCCTGTACAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000421037.1
ENST00000473749.1
ENST00000539065.5
CDS TCA 72 bp CAGAGAAATATATTTGAGGGCAGGAAAAACCAGCTCTaGCCATGTAAGTTCATGCCAGGGCAGAAAGCATTC +
Preference number: 6 (lower is better)
Translates to: QRNIFEGRKNQL*PCKFMPGQKAF
Trigger: GAATGCTTTCTGCCCTGGCATGAACTTACATGGTCAGAGCTGGTTTTTCCTGCCCTCAAATATATTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409175.6
CDS GCA 72 bp TGTAACCACTTTTTCATACAGTCTTGGTGGACATACTaGAAACTTCCTGTGCACTTGCATGGCTCTATCAGC +
Preference number: 6 (lower is better)
Translates to: CNHFFIQSWWTY*KLPVHLHGSIS
Trigger: GCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS CCA 72 bp ATTTTGGCCTGTAACCACTTTTTCATACAGTCTTGGTaGACATACTGCAAACTTCCTGTGCACTTGCATGGC +
Preference number: 6 (lower is better)
Translates to: ILACNHFFIQSW*TYCKLPVHLHG
Trigger: GCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACAGGCCAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000420397.1
ENST00000539065.5
CDS CAA 72 bp TTTTTGAATCATGATCCCGTTGCTGGTTCTGCGATCTaGAGCGTGCTCCCTGAGTTATCTCAGATTCACTAT +
Preference number: 6 (lower is better)
Translates to: FLNHDPVAGSAI*SVLPELSQIHY
Trigger: ATAGTGAATCTGAGATAACTCAGGGAGCACGCTCAAGATCGCAGAACCAGCAACGGGATCATGATTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000421037.1
ENST00000473749.1
ENST00000539065.5
CDS CAA 72 bp CAGTCTTGGTGGACATACTGCAAACTTCCTGTGCACTaGCATGGCTCTATCAGCAAATTAGATGATGATGCA +
Preference number: 6 (lower is better)
Translates to: QSWWTYCKLPVH*HGSISKLDDDA
Trigger: TGCATCATCATCTAATTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS CAA 90 bp TCTTCGGAATCATCCTCTGAAGTCGGACACGTGTGCTTGGTTCATTaGTATTTCCCATCATATCAGAAAAGCTTTGTTCGCACAAGTGCA +
Preference number: 6 (lower is better)
Translates to: SSESSSEVGHVCLVH*YFPSYQKSFVRTSA
Trigger: TGCACTTGTGCGAACAAAGCTTTTCTGATATGATGGGAAATACAAATGAACCAAGCACACGTGTCCGACTTCAGAGGATGATTCCGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420397.1
ENST00000539065.5
CDS CAA 72 bp CAACCTGAAGGAATAATATCTACTGTGATCATGACATaGTCGGTCAAATTACTCCCAAGTGCTGGAGGGACT +
Preference number: 6 (lower is better)
Translates to: QPEGIISTVIMT*SVKLLPSAGGT
Trigger: AGTCCCTCCAGCACTTGGGAGTAATTTGACCGACAATGTCATGATCACAGTAGATATTATTCCTTCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS CAA 72 bp TCTTCGGAATCATCCTCTGAAGTCGGACACGTGTGCTaGGTTCATTTGTATTTCCCATCATATCAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: SSESSSEVGHVC*VHLYFPSYQKS
Trigger: GCTTTTCTGATATGATGGGAAATACAAATGAACCAAGCACACGTGTCCGACTTCAGAGGATGATTCCGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420397.1
ENST00000539065.5
CDS CAA 90 bp TTTTTCATACAGTCTTGGTGGACATACTGCAAACTTCCTGTGCACTaGCATGGCTCTATCAGCAAATTAGATGATGATGCAGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: FFIQSWWTYCKLPVH*HGSISKLDDDAAAI
Trigger: AATGGCAGCTGCATCATCATCTAATTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS TCA 72 bp TCATCCTCTGAAGTTTCGAGATCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTAATAAATCGGACACGT +
Preference number: 6 (lower is better)
Translates to: SSSEVSRSSICA*RVLARLINRTR
Trigger: ACGTGTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCGAAACTTCAGAGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000478396.1
CDS CAA 90 bp CTTAAAGATTTTTCTAGTCTAACCGGTAGAGTCAGAGAAATATATTaGAGGGCAGGAAAAACCAGCTCTGACCATGTAAGTTCATGCCAG +
Preference number: 6 (lower is better)
Translates to: LKDFSSLTGRVREIY*RAGKTSSDHVSSCQ
Trigger: CTGGCATGAACTTACATGGTCAGAGCTGGTTTTTCCTGCCCTCAAATATATTTCTCTGACTCTACCGGTTAGACTAGAAAAATCTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409175.6
ENST00000421037.1
CDS CCA 72 bp TTAATTTTGGCCTGTAACCACTTTTTCATACAGTCTTaGTGGACATACTGCAAACTTCCTGTGCACTTGCAT +
Preference number: 6 (lower is better)
Translates to: LILACNHFFIQS*WTYCKLPVHLH
Trigger: ATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTATGAAAAAGTGGTTACAGGCCAAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000420397.1
ENST00000539065.5
CDS CAA 90 bp GCAATTGGTGGTTTGTGGATGATGTATTCAACTGTAAAGTGCTCATaGAGTTTTCTTTTGGTCTTGCTCCTTGTGAATATGAAGGAACTC +
Preference number: 6 (lower is better)
Translates to: AIGGLWMMYSTVKCS*SFLLVLLLVNMKEL
Trigger: GAGTTCCTTCATATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGAGCACTTTACAGTTGAATACATCATCCACAAACCACCAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS GCA 72 bp CTCTACTTGAACTGTAAGAAAATCCAGGCTGCGTATTaGTTCGGGAAGATTCTGATTCTCTTGAAGAAAAAT +
Preference number: 6 (lower is better)
Translates to: LYLNCKKIQAAY*FGKILILLKKN
Trigger: ATTTTTCTTCAAGAGAATCAGAATCTTCCCGAAGCAATACGCAGCCTGGATTTTCTTACAGTTCAAGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS CAA 72 bp TTAGTATGGTCTGATGTTCAGAAGGCAATTGGTGGTTaGTGGATGATGTATTCAACTGTAAAGTGCTCATTG +
Preference number: 6 (lower is better)
Translates to: LVWSDVQKAIGG*WMMYSTVKCSL
Trigger: CAATGAGCACTTTACAGTTGAATACATCATCCACAAACCACCAATTGCCTTCTGAACATCAGACCATACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS TCA 72 bp GTCTTTGAGATGAAACAACCCTTTCTGAATTGCTTATaGTTGGGGCTTCATCTCTACTTGAACTGTAAGAAA +
Preference number: 6 (lower is better)
Translates to: VFEMKQPFLNCL*LGLHLYLNCKK
Trigger: TTTCTTACAGTTCAAGTAGAGATGAAGCCCCAATCATAAGCAATTCAGAAAGGGTTGTTTCATCTCAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS CAA 72 bp TCAACTGTAAAGTGCTCATTGAGTTTTCTTTTGGTCTaGCTCCTTGTGAATATGAAGGAACTCTGTCTTGAA +
Preference number: 6 (lower is better)
Translates to: STVKCSLSFLLV*LLVNMKELCLE
Trigger: TTCAAGACAGAGTTCCTTCATATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGAGCACTTTACAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS CAA 72 bp GGTTTGTGGATGATGTATTCAACTGTAAAGTGCTCATaGAGTTTTCTTTTGGTCTTGCTCCTTGTGAATATG +
Preference number: 6 (lower is better)
Translates to: GLWMMYSTVKCS*SFLLVLLLVNM
Trigger: CATATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGAGCACTTTACAGTTGAATACATCATCCACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000473749.1
ENST00000539065.5
CDS CAA 90 bp AAGCTGATGGTACATTACTACGGGACTGTGAAGCTGTCAAGATTCTaGGAGAAACGTAAGAATTTTCAGAATTCAATGATCTTGTATTCA +
Preference number: 6 (lower is better)
Translates to: KLMVHYYGTVKLSRF*EKRKNFQNSMILYS
Trigger: TGAATACAAGATCATTGAATTCTGAAAATTCTTACGTTTCTCCAAGAATCTTGACAGCTTCACAGTCCCGTAGTAATGTACCATCAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000539065.5
CDS CAA 90 bp ATGATGTATTCAACTGTAAAGTGCTCATTGAGTTTTCTTTTGGTCTaGCTCCTTGTGAATATGAAGGAACTCTGTCTTGAACATATGATG +
Preference number: 6 (lower is better)
Translates to: MMYSTVKCSLSFLLV*LLVNMKELCLEHMM
Trigger: CATCATATGTTCAAGACAGAGTTCCTTCATATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGAGCACTTTACAGTTGAATACATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
CDS CAA 90 bp ATGATGTATTCAACTGTAAAGTGCTCATTGAGTTTTCTTTTGGTCTaGCTCCTTGTGAATATGAAGGAACTCTGTCTTGAACATCTGATA +
Preference number: 6 (lower is better)
Translates to: MMYSTVKCSLSFLLV*LLVNMKELCLEHLI
Trigger: TATCAGATGTTCAAGACAGAGTTCCTTCATATTCACAAGGAGCAAGACCAAAAGAAAACTCAATGAGCACTTTACAGTTGAATACATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473749.1
ENST00000539065.5
CDS TCA 72 bp TCTATCAGCAAATTAGATGATGATGCAGCTGCCATTTaGCAAATTCTACATAAGTCACCTTCTTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SISKLDDDAAAI*QILHKSPSSSS
Trigger: AGAAGAAGAAGAAGGTGACTTATGTAGAATTTGTCAAATGGCAGCTGCATCATCATCTAATTTGCTGATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259050.8
ENST00000409175.6
ENST00000409591.5
ENST00000461582.1
ENST00000539065.5