Pregenerated sensors for MARCHF5 (Homo sapiens)
Ensembl gene IDs: ENSG00000198060Ensembl transcript IDs: ENST00000358935.3, ENST00000462465.1, ENST00000467521.6, ENST00000492319.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTaGGAAGACTGGCATGTGGTATTTCTCGAGCTAATAATAATAAGG | + |
|
Preference number: 1 (lower is better) Translates to: CLCSFVASWSGRSPS*EDWHVVFLELIIIR Trigger: CCTTATTATTATTAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CCA 90 bp | TCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTaGCATGTGGTATTTCTCGAGCTAATAATAATAAGGCTCTTTAGG | + |
|
Preference number: 1 (lower is better) Translates to: SFVASWSGRSPSWED*HVVFLELIIIRLFR Trigger: CCTAAAGAGCCTTATTATTATTAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR GCA 90 bp | AAATACACACACACACACACACACACACACACACACACACACGACTaGATGAGTCAAAATTACTTCATGAAGTATGAGATGTCAACATTA | + |
|
Preference number: 1 (lower is better) Translates to: KYTHTHTHTHTHTHD*MSQNYFMKYEMSTL Trigger: TAATGTTGACATCTCATACTTCATGAAGTAATTTTGACTCATGCAGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR GCA 90 bp | ATTAAGAAACAACTACTGCTTTGTAGGGGCGATTTTGAGCCTAAGTaGTGCTGTTCCTTTAATCTCTCAGTTAATCCTAGAAATAGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: IKKQLLLCRGDFEPK*CCSFNLSVNPRNSL Trigger: AAGACTATTTCTAGGATTAACTGAGAGATTAAAGGAACAGCAGCACTTAGGCTCAAAATCGCCCCTACAAAGCAGTAGTTGTTTCTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CCA 90 bp | TTGCAAACTAACATAGCTCAATCTATATTTGCTACACTCCTAAAGTaGCCGCTTATCAGTAAGGGGAAACATTTATTATTGACATGCATT | + |
|
Preference number: 1 (lower is better) Translates to: LQTNIAQSIFATLLK*PLISKGKHLLLTCI Trigger: AATGCATGTCAATAATAAATGTTTCCCCTTACTGATAAGCGGCCACTTTAGGAGTGTAGCAAATATAGATTGAGCTATGTTAGTTTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGTATTTCTCGAGCTAGCTACACTCCTAAAGTaGCCGCTTATCAGTAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WSGRSPSWEDWHVVFLELATLLK*PLISKG Trigger: CCCCTTACTGATAAGCGGCCACTTTAGGAGTGTAGC...TAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTTGGTCCTCAGGCACTTaGAGTTCCCTCCCCGCAACC | + |
|
Preference number: 2 (lower is better) Translates to: NFKSAYALLLLHGQAGHLWSSGT*SSLPAT Trigger: GGTTGCGGGGAGGGAACTGCAAGTGCCTGAGGACCA...AAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTTAAAAGTGTTCAATTCGGGGCTAGAGGCCACTCTGGTCCTCAGGCACTTACTCTGCACAGTGCCTaGGAAATAGGAGGTGATCAA | + |
|
Preference number: 2 (lower is better) Translates to: RFKSVQFGARGHSGPQALTLHSA*EIGGDQ Trigger: TTGATCACCTCCTATTTCCCAGGCACTGTGCAGAGT...AAGTGCCTGAGGACCAGAGTGGCCTCTAGCCCCGAATTGAACACTTTTAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGTGTCTGGAGAAAATATaGACAAAACCCAGGTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWCLEKI*TKPRFT Trigger: GGTAAACCTGGGTTTTGTTCATATTTTCTCCAGACA...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGCGAGATGATTTCCCCTaGCCTAAGTGCTTTATTATA | + |
|
Preference number: 2 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWRDDFP*PKCFII Trigger: TATAATAAAGCACTTAGGGCAGGGGAAATCATCTCG...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGGGGGAACTGTGTGTTTaGATAACTTTAGTAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWGELCV*ITLVKA Trigger: AGCCTTTACTAAAGTTATGCAAACACACAGTTCCCC...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTCAAGGCCTCACCTTaGTTTATTCACTGCTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFLKASP*FIHCWF Trigger: AAACCAGCAGTGAATAAACCAAGGTGAGGCCTTGAG...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCACACACACACACGACTaGATGAGTCAAAATTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFTHTHD*MSQNYF Trigger: GAAGTAATTTTGACTCATGCAGTCGTGTGTGTGTGT...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTTTGGAGGACATCACATaGGTTAAAGAAAACACCACA | + |
|
Preference number: 2 (lower is better) Translates to: NFKSAYALLLLHGQAGHLLEDIT*VKENTT Trigger: TGTGGTGTTTTCTTTAACCCATGTGATGTCCTCCAA...AAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR TCA 90 bp | AACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTGAATATCTCAATAACTaGATCAATGCAAGAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NFKSAYALLLLHGQAGHLEYLNN*INARGE Trigger: CTCTCCTCTTGCATTGATTCAGTTATTGAGATATTC...AAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATTTACCCTACACATTTTaGAGGACATCACATGGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDLPYTF*RTSHGL Trigger: TAACCCATGTGATGTCCTCCAAAATGTGTAGGGTAA...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATGCACAGTTTGATCTTTaGATTTCTGTCTGGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDAQFDL*ISVWRK Trigger: TTTTCTCCAGACAGAAATGCAAAGATCAAACTGTGC...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATATCCTCATAGTACCTTaGGTTGCTGATTCTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QIILCSNYYKLAAVISRNILIVP*VADSEK Trigger: TTTCTCAGAATCAGCAACTCAAGGTACTATGAGGAT...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCCAAAAGGATTAGAGTaGTTCCCCGGCCTTCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFPKGLE*FPGLHE Trigger: CTCATGAAGGCCGGGGAACAACTCTAATCCTTTTGG...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR GCA 72 bp | GTCTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTaGTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VYPTLSLPMLFC*FMVRQVTFLGR Trigger: TCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CCA 72 bp | GCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTaGCATGTGGTATTTCTCGAGCTAATAATAATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASWSGRSPSWED*HVVFLELIIIR Trigger: CCTTATTATTATTAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTTGGACCAAGTCTGTCTaGTTCACCACTATGTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: NFKSAYALLLLHGQAGHLWTKSV*FTTMSY Trigger: GTAGGACATAGTGGTGAACAAGACAGACTTGGTCCA...AAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCGTACAAAAGAGGCATTaGAATAAAACAGCATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFVQKRH*NKTACA Trigger: TGCACATGCTGTTTTATTCAAATGCCTCTTTTGTAC...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR GCA 72 bp | CTACTGCTTTGTAGGGGCGATTTTGAGCCTAAGTGCTaGTGTTCCTTTAATCTCTCAGTTAATCCTAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLCRGDFEPKC*CSFNLSVNPRN Trigger: ATTTCTAGGATTAACTGAGAGATTAAAGGAACAGCAGCACTTAGGCTCAAAATCGCCCCTACAAAGCAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATTGGGGAACTGTGTGTTaGCATAACTTTAGTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDWGTVC*HNFSKG Trigger: GCCTTTACTAAAGTTATGCAAACACACAGTTCCCCA...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CCA 72 bp | AACATAGCTCAATCTATATTTGCTACACTCCTAAAGTaGCCGCTTATCAGTAAGGGGAAACATTTATTATTG | + |
|
Preference number: 3 (lower is better) Translates to: NIAQSIFATLLK*PLISKGKHLLL Trigger: CAATAATAAATGTTTCCCCTTACTGATAAGCGGCCACTTTAGGAGTGTAGCAAATATAGATTGAGCTATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR TCA 72 bp | CAAATTATGTCAGTGAGAAAAATCCTCATAGTACCTTaGGTTGCTGATTCTGAGAAAACACTAAACATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QIMSVRKILIVP*VADSEKTLNMN Trigger: GTTCATGTTTAGTGTTTTCTCAGAATCAGCAACTCAAGGTACTATGAGGATTTTTCTCACTGACATAATTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAAAGTGTTCAATTCGGGGCTAGAGGCCACTCTGGTCCTCAGGCACTTCGAGGTTCCGGTCCATaGACCGCGGGCGCCGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFKSVQFGARGHSGPQALRGSGP*TAGAEL Trigger: CAACTCGGCGCCCGCGGTCCATGGACCGGAACCTCG...AAGTGCCTGAGGACCAGAGTGGCCTCTAGCCCCGAATTGAACACTTTTAAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCCGCGGGCGCCGAGTTaGTGCCGGCGGAGGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGPRAPS*CRRRSY Trigger: GTAGCTCCTCCGCCGGCAGCAACTCGGCGCCCGCGG...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGTATTTCTCGAGCTAGGCAGGTCACCTTCCTaGGAAGACTGGCATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WSGRSPSWEDWHVVFLELGRSPS*EDWHVV Trigger: TACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCC...TAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | AGGTTTAAAAGTGTTCAATTCGGGGCTAGAGGCCACTCTGGTCCTCAGGCACTTCTTCTGTCCAGCATCTaGTGTAGGGCTTGGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RFKSVQFGARGHSGPQALLLSSI*CRAWSG Trigger: GCCGGACCAAGCCCTACAGCAGATGCTGGACAGAAG...AAGTGCCTGAGGACCAGAGTGGCCTCTAGCCCCGAATTGAACACTTTTAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGCGAGTAGCAGAGACATaGTCTGCTAAAGGATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWRVAET*SAKGLA Trigger: GGCCAATCCTTTAGCAGATCATGTCTCTGCTACTCG...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTCACCTTGGTTTATTCACTGCTGGTTTTCTATGTGCTGAAACTAGACTGTCAACGGGCGCCGAGTTGCTaGCGGCGGAGGAGCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLVYSLLVFYVLKLDCQRAPSC*RRRSYL Trigger: AAGGTAGCTCCTCCGCCGGCAGCAACTCGGCGCCCG...TTGACAGTCTAGTTTCAGCACATAGAAAACCAGCAGTGAATAAACCAAGGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGGATCTGCTAAAGGATTaGCCTCAGCTGGAATTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWDLLKD*PQLEFE Trigger: CTCGAATTCCAGCTGAGGCCAATCCTTTAGCAGATC...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTATCTGCTGTAGGGCTTaGTCCGGCATCTTCCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGICCRA*SGIFRG Trigger: TCCGCGGAAGATGCCGGACCAAGCCCTACAGCAGAT...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTCACCTTGGTTTATTCACTGCTGGTTTTCTATGTGCTGAAACTAGACTGTCAATGGTCCTCAGGCACTTaGAGTTCCCTCCCCGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LTLVYSLLVFYVLKLDCQWSSGT*SSLPAT Trigger: GGTTGCGGGGAGGGAACTGCAAGTGCCTGAGGACCA...TTGACAGTCTAGTTTCAGCACATAGAAAACCAGCAGTGAATAAACCAAGGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCTATTCAGCATTGCACTaGGGACATGCCACTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFYSALH*GHATLA Trigger: AGCCAGAGTGGCATGTCCTCAGTGCAATGCTGAATA...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCAAATGGACAGGCTTTTaGGATCAGTCTATCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YALLLLHGQAGHLPGKTGKWTGF*DQSICK Trigger: CTTGCAGATAGACTGATCTCAAAAGCCTGTCCATTT...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAGCCCTGTGAATTTTTACCCTACACATTTTGGAGGACATCACATGGGTGCCGACCATTATTCCTaGTGCAGCAAATGGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPVNFYPTHFGGHHMGADHYS*CSKWTG Trigger: GCCTGTCCATTTGCTGCAGCAGGAATAATGGTCGGC...ACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAAAATTCACAGGGCTTCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGTATTTCTCGAGCTATTGGAGGACATCACATaGGTTAAAGAAAACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: WSGRSPSWEDWHVVFLELLEDIT*VKENTT Trigger: TGTGGTGTTTTCTTTAACCCATGTGATGTCCTCCAA...TAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCTGTCTGGAGAAAATATaGACAAAACCCAGGTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: YALLLLHGQAGHLPGKTGCLEKI*TKPRFT Trigger: GGTAAACCTGGGTTTTGTTCATATTTTCTCCAGACA...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCTTGAAAGCTGAACTATaGTTTGAACCCAGGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: YALLLLHGQAGHLPGKTGLKAEL*FEPRSI Trigger: GATAGACCTGGGTTCAAATCATAGTTCAGCTTTCAA...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCACACACACACACGACTaGATGAGTCAAAATTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YALLLLHGQAGHLPGKTGTHTHD*MSQNYF Trigger: GAAGTAATTTTGACTCATGCAGTCGTGTGTGTGTGT...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCTTTGAGCCTAAGTGCTaGTGTTCCTTTAATCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YALLLLHGQAGHLPGKTGFEPKC*CSFNLS Trigger: TGAGAGATTAAAGGAACAGCAGCACTTAGGCTCAAA...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACTCCTCTGCACCTGCATaGTCTCACCCATTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DETLKHTNTHTHTHTHTHSSAPA*SHPFSC Trigger: ACAGCTGAATGGGTGAGACCATGCAGGTGCAGAGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTTGTAGACAGGCCTGGTaGACCCATTTTGTAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGCRQAW*THFVDP Trigger: AGGATCTACAAAATGGGTTCACCAGGCCTGTCTACA...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCGTACTGTTTCCTCTTTaGTTTTCATCCACCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFVLFPL*FSSTQR Trigger: ACGCTGGGTGGATGAAAAGCAAAGAGGAAACAGTAC...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTGAGGACATGCCACTCTaGCTGTACTGTTTCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGEDMPL*LYCFLF Trigger: AAAGAGGAAACAGTACAGCCAGAGTGGCATGTCCTC...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGCCCTGTGAATTTTTACCCTACACATTTTGGAGGACATCACATGGGTTCTTTTGTTGCTTCATaGTCAGGCAGGTCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPVNFYPTHFGGHHMGSFVAS*SGRSPS Trigger: GGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGA...ACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAAAATTCACAGGGCTTCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACGTTCCCCGGCCTTCATaGGCCCTAATACCTATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DETLKHTNTHTHTHTHTHVPRPS*ALIPIK Trigger: TTTTATAGGTATTAGGGCTCATGAAGGCCGGGGAAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACCTGCATCACTGTCACTaGTCCATAAGTCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DETLKHTNTHTHTHTHTHLHHCH*SISHSC Trigger: ACAGCTGTGACTTATGGAGCAGTGACAGTGATGCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | CTCACCTTGGTTTATTCACTGCTGGTTTTCTATGTGCTGAAACTAGACTGTCAAAGGATTGGCCTCAGCTaGAATTCGAGGAACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LTLVYSLLVFYVLKLDCQRIGLS*NSRNRT Trigger: TGTCCTGTTCCTCGAATTCCAGCTGAGGCCAATCCT...TTGACAGTCTAGTTTCAGCACATAGAAAACCAGCAGTGAATAAACCAAGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACACTCTGCACAGTGCCTaGGAAATAGGAGGTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DETLKHTNTHTHTHTHTHTLHSA*EIGGDQ Trigger: TTGATCACCTCCTATTTCCCAGGCACTGTGCAGAGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | AACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCTCAAGGCCTCACCTTaGTTTATTCACTGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFKSAYALLLLHGQAGHLLKASP*FIHCWF Trigger: AAACCAGCAGTGAATAAACCAAGGTGAGGCCTTGAG...AAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTCACCTTGGTTTATTCACTGCTGGTTTTCTATGTGCTGAAACTAGACTGTCAACCTATGCTCTTTTGTTaGTTCATGGTCAGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLVYSLLVFYVLKLDCQPMLFC*FMVRQV Trigger: GACCTGCCTGACCATGAAGCAACAAAAGAGCATAGG...TTGACAGTCTAGTTTCAGCACATAGAAAACCAGCAGTGAATAAACCAAGGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTAACTCTGTAAGAGCTTaGACCAAGTCTGTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGNSVRA*TKSVLF Trigger: GAACAAGACAGACTTGGTCCAAGCTCTTACAGAGTT...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATGCTACACTCCTAAAGTaGCCGCTTATCAGTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDATLLK*PLISKG Trigger: CCCCTTACTGATAAGCGGCCACTTTAGGAGTGTAGC...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CAA 72 bp | TATGTGCTGAAACTAGACTGTCAACTCTGTAAGAGCTaGGACCAAGTCTGTCTTGTTCACCACTATGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YVLKLDCQLCKS*DQVCLVHHYVL Trigger: TAGGACATAGTGGTGAACAAGACAGACTTGGTCCAAGCTCTTACAGAGTTGACAGTCTAGTTTCAGCACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCGAATATCTCAATAACTaGATCAATGCAAGAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFEYLNN*INARGE Trigger: CTCTCCTCTTGCATTGATTCAGTTATTGAGATATTC...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATATTGCACTGAGGACATaGCACTCTGGCTGTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDIALRT*HSGCTV Trigger: AACAGTACAGCCAGAGTGGCATGTCCTCAGTGCAAT...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTCACCTTGGTTTATTCACTGCTGGTTTTCTATGTGCTGAAACTAGACTGTCAAGACCATTATTCCTGCTaGAGCAAATGGACAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLVYSLLVFYVLKLDCQDHYSC*SKWTGF Trigger: AAAGCCTGTCCATTTGCTGCAGCAGGAATAATGGTC...TTGACAGTCTAGTTTCAGCACATAGAAAACCAGCAGTGAATAAACCAAGGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCGAGATGATTTCCCCTaGCCTAAGTGCTTTATTATA | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGRDDFP*PKCFII Trigger: TATAATAAAGCACTTAGGGCAGGGGAAATCATCTCG...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | ACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCGCACAGTTTGATCTTTaGATTTCTGTCTGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSLPMLFCCFMVRQVTFAQFDL*ISVWRK Trigger: TTTTCTCCAGACAGAAATGCAAAGATCAAACTGTGC...GAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGCCCTGTGAATTTTTACCCTACACATTTTGGAGGACATCACATGGGTTTACCCTACACATTTTaGAGGACATCACATGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGSPVNFYPTHFGGHHMGLPYTF*RTSHGL Trigger: TAACCCATGTGATGTCCTCCAAAATGTGTAGGGTAA...ACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAAAATTCACAGGGCTTCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CAA 72 bp | CAATTAAGAAACAACTACTGCTTTGTAGGGGCGATTTaGAGCCTAAGTGCTGCTGTTCCTTTAATCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLRNNYCFVGAI*SLSAAVPLISQ Trigger: CTGAGAGATTAAAGGAACAGCAGCACTTAGGCTCAAAATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATAAAAACCCTCCCTCCTaGCCCAAAAGGATTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDKNPPS*PKRIRV Trigger: AACTCTAATCCTTTTGGGGCAGGAGGGAGGGTTTTT...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACGATTTTGAGCCTAAGTaGTGCTGTTCCTTTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DETLKHTNTHTHTHTHTHDFEPK*CCSFNL Trigger: GAGATTAAAGGAACAGCAGCACTTAGGCTCAAAATC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTTTAAGAAACAACTACTaGTTTGTAGGGGCGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNFKSAYALLLLHGQAGLRNNY*FVGAIL Trigger: CAAAATCGCCCCTACAAAGCAGTAGTTGTTTCTTAA...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATCCTTCCTGGGAAGACTaGCATGTGGTATTTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIILCSNYYKLAAVISRNPSWED*HVVFLE Trigger: CTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGG...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATTCCAGACCTTCTTTATaGCCTACAACCTGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: QIILCSNYYKLAAVISRNSRPSL*PTTCIT Trigger: AGTGATGCAGGTTGTAGGTCATAAAGAAGGTCTGGA...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR TCA 90 bp | CTCACCTTGGTTTATTCACTGCTGGTTTTCTATGTGCTGAAACTAGACTGTCAAAAGTTAGCAAGGCAGTaGCTAATTAAGTCACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLVYSLLVFYVLKLDCQKLARQ*LIKSLS Trigger: ACTTAGTGACTTAATTAGTCACTGCCTTGCTAACTT...TTGACAGTCTAGTTTCAGCACATAGAAAACCAGCAGTGAATAAACCAAGGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATGATAATTCAGAATTTTaGGGTGTGCCTGTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDDNSEF*GVPVVN Trigger: ATTTACGACAGGCACACCGCAAAATTCTGAATTATC...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATAGCTCAATCTATATTTaGTACACTCCTAAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QIILCSNYYKLAAVISRNSSIYI*YTPKVA Trigger: GGCCACTTTAGGAGTGTAGCAAATATAGATTGAGCT...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATGGGGAACTGTGTGTTTaGATAACTTTAGTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIILCSNYYKLAAVISRNGELCV*ITLVKA Trigger: AGCCTTTACTAAAGTTATGCAAACACACAGTTCCCC...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATTTCATTTGTCCCCAATaGCTTTCTTTTACCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIILCSNYYKLAAVISRNFICPQ*LSFTSP Trigger: TGGAGAGGTAAAAGAAAGGCATTGGGGACAAATGAA...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| 3UTR CAA 72 bp | AAGTGGCCGCTTATCAGTAAGGGGAAACATTTATTATaGACATGCATTACTGTGAACAAGAAAATAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KWPLISKGKHLL*TCITVNKKINR Trigger: CCTATTTATTTTCTTGTTCACAGTAATGCATGTCAATAATAAATGTTTCCCCTTACTGATAAGCGGCCACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATCAGAAGTCAGTTTTATaGTTCTTCTTGTTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: QIILCSNYYKLAAVISRNQKSVL*FFLFWI Trigger: TATCCAGAACAAGAAGAAGCATAAAACTGACTTCTG...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS TCA 90 bp | CTGCGGGAGTCCGGCGGAGGCGGCGGAGAGCGAGGAGGAGGAGCCTaGGGCGGGGAGGCGGCGATCGCGGCCCGGGTTCCCGTCCGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRESGGGGGERGGGA*GGEAAIAARVPVRR Trigger: CCGACGGACGGGAACCCGGGCCGCGATCGCCGCCTCCCCGCCTCAGGCTCCTCCTCCTCGCTCTCCGCCGCCTCCGCCGGACTCCCGCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS CCA 90 bp | AGCCGCGAACCCGTCACCCAGCTTCCCGGGGCAGCTCCGCTAGCCTaGCGGCGGCGGTGCAGGGCCTGCGGGAGTCCGGCGGAGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SREPVTQLPGAAPLA*RRRCRACGSPAEAA Trigger: CGCCGCCTCCGCCGGACTCCCGCAGGCCCTGCACCGCCGCCGCCAGGCTAGCGGAGCTGCCCCGGGAAGCTGGGTGACGGGTTCGCGGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS GCA 90 bp | CTTCCCGGGGCAGCTCCGCTAGCCTGGCGGCGGCGGTGCAGGGCCTaGGGGAGTCCGGCGGAGGCGGCGGAGAGCGAGGAGGAGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGAAPLAWRRRCRA*GSPAEAAESEEEEP Trigger: AGGCTCCTCCTCCTCGCTCTCCGCCGCCTCCGCCGGACTCCCGCAGGCCCTGCACCGCCGCCGCCAGGCTAGCGGAGCTGCCCCGGGAAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS GCA 90 bp | GTCACCCAGCTTCCCGGGGCAGCTCCGCTAGCCTGGCGGCGGCGGTaGAGGGCCTGCGGGAGTCCGGCGGAGGCGGCGGAGAGCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTQLPGAAPLAWRRR*RACGSPAEAAESEE Trigger: CTCCTCGCTCTCCGCCGCCTCCGCCGGACTCCCGCAGGCCCTGCACCGCCGCCGCCAGGCTAGCGGAGCTGCCCCGGGAAGCTGGGTGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS CCA 90 bp | GATCGCGGCCCGGGTTCCCGTCCGTCGGCCCGAGGTTCCGGTCCATaGACCGCGGGCGCCGAGTTGCTGCCGGCGGAGGAGCTACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DRGPGSRPSARGSGP*TAGAELLPAEELPL Trigger: CAAAGGTAGCTCCTCCGCCGGCAGCAACTCGGCGCCCGCGGTCCATGGACCGGAACCTCGGGCCGACGGACGGGAACCCGGGCCGCGATC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGACCGCGGGCGCCGAGTaGCTGCCGGCGGAGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWTAGAE*LPAEEL Trigger: TAGCTCCTCCGCCGGCAGCAACTCGGCGCCCGCGGT...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCGCTCAAGGCCTCACCTaGGTTTATTCACTGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YALLLLHGQAGHLPGKTGAQGLT*VYSLLV Trigger: AACCAGCAGTGAATAAACCAAGGTGAGGCCTTGAGC...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACCTGGTCCTCAGGCACTaGCAGTTCCCTCCCCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DETLKHTNTHTHTHTHTHLVLRH*QFPPRN Trigger: GTTGCGGGGAGGGAACTGCAAGTGCCTGAGGACCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS TCA 90 bp | TTTCCTCTTTGCTTTTCATCCACCCAGCGTTGTAGACAGGCCTGGTaGACCCATTTTGTAGATCCTCTGCACCTGCATGGTCTCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPLCFSSTQRCRQAW*THFVDPLHLHGLTH Trigger: ATGGGTGAGACCATGCAGGTGCAGAGGATCTACAAAATGGGTTCACCAGGCCTGTCTACAACGCTGGGTGGATGAAAAGCAAAGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358935.3 ENST00000467521.6 |
||
| CDS-3UTR CAA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCTGTACTGTTTCCTCTTaGCTTTTCATCCACCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YALLLLHGQAGHLPGKTGCTVSS*LFIHPA Trigger: CGCTGGGTGGATGAAAAGCAAAGAGGAAACAGTACA...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | AGGTTTAAAAGTGTTCAATTCGGGGCTAGAGGCCACTCTGGTCCTCAGGCACTTGCCTATGCTCTTTTGTaGCTTCATGGTCAGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFKSVQFGARGHSGPQALAYALL*LHGQAG Trigger: ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGC...AAGTGCCTGAGGACCAGAGTGGCCTCTAGCCCCGAATTGAACACTTTTAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS TCA 90 bp | GTAGGAAAGACAAGGGCTCCACACAAGATTCGAGTAGCAGAGACATaGTCTGCTAAAGGATTGGCCTCAGCTGGAATTCGAGGAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGKTRAPHKIRVAET*SAKGLASAGIRGTG Trigger: TCCTGTTCCTCGAATTCCAGCTGAGGCCAATCCTTTAGCAGATCATGTCTCTGCTACTCGAATCTTGTGTGGAGCCCTTGTCTTTCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358935.3 ENST00000467521.6 ENST00000492319.1 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGTTTACCCTACACATTTaGGAGGACATCACATGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLHGQAGHLPGKTGMWFTLHI*EDITWV Trigger: AACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAA...CCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | TATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCAGTTTATTCGAGTATTaGCGCCACAGTCTAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: YALLLLHGQAGHLPGKTGSLFEY*RHSLST Trigger: TGTGCTTAGACTGTGGCGCAAATACTCGAATAAACT...GCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS GCA 90 bp | TGTAATCCCACTGGCAAGAGGGACAGGTGTGATGATTCATGCATATaGCAGGAGAGAAAGCACCTACAACATAGTTCCAAAAGGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CNPTGKRDRCDDSCI*QERKHLQHSSKRPE Trigger: TTCTGGCCTTTTGGAACTATGTTGTAGGTGCTTTCTCTCCTGGCATATGCATGAATCATCACACCTGTCCCTCTTGCCAGTGGGATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492319.1 |
||
| CDS-3UTR CAA 90 bp | TGGTCAGGCAGGTCACCTTCCTGGGAAGACTGGCATGTGGTATTTCTCGAGCTAGTACAAAAGAGGCATTaGAATAAAACAGCATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WSGRSPSWEDWHVVFLELVQKRH*NKTACA Trigger: TGCACATGCTGTTTTATTCAAATGCCTCTTTTGTAC...TAGCTCGAGAAATACCACATGCCAGTCTTCCCAGGAAGGTGACCTGCCTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS GCA 90 bp | AAGTACTGTAATCCCACTGGCAAGAGGGACAGGTGTGATGATTCATaGATATGCCAGGAGAGAAAGCACCTACAACATAGTTCCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KYCNPTGKRDRCDDS*ICQERKHLQHSSKR Trigger: CCTTTTGGAACTATGTTGTAGGTGCTTTCTCTCCTGGCATATGCATGAATCATCACACCTGTCCCTCTTGCCAGTGGGATTACAGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492319.1 |
||
| CDS-3UTR CAA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTTGGACCAAGTCTGTCTaGTTCACCACTATGTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSNFKSAYALLLLHGQAGWTKSV*FTTMSY Trigger: GTAGGACATAGTGGTGAACAAGACAGACTTGGTCCA...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAGCCCTGTGAATTTTTACCCTACACATTTTGGAGGACATCACATGGGTTCTGCCTATGCTCTTTaGTTGCTTCATGGTCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSPVNFYPTHFGGHHMGSAYAL*LLHGQA Trigger: TGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGA...ACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAAAATTCACAGGGCTTCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS CCA 90 bp | GAAAAACTATTAGGTATTCAGCATTGCACTGAGGACATGCCACTCTaGCTGTACTGTTTCCTCTTTGCTTTTCATCCACCCAGCGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EKLLGIQHCTEDMPL*LYCFLFAFHPPSVV Trigger: TACAACGCTGGGTGGATGAAAAGCAAAGAGGAAACAGTACAGCCAGAGTGGCATGTCCTCAGTGCAATGCTGAATACCTAATAGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358935.3 ENST00000467521.6 |
||
| CDS-3UTR CAA 90 bp | CTATCCAACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTTCCCAGCGAATCATCTaGCCTAATATCAGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSNFKSAYALLLLHGQAGSQRII*PNISMT Trigger: TGTCATGCTGATATTAGGCAAGATGATTCGCTGGGA...ACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTTGGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAGCCCTGTGAATTTTTACCCTACACATTTTGGAGGACATCACATGGGTAAGCTGAACTATGATTaGAACCCAGGTCTATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSPVNFYPTHFGGHHMGKLNYD*NPGLSN Trigger: GTTGGATAGACCTGGGTTCAAATCATAGTTCAGCTT...ACCCATGTGATGTCCTCCAAAATGTGTAGGGTAAAAATTCACAGGGCTTCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | GATGAAACACTGAAACACACAAATACACACACACACACACACACACACACACACCAAATGGACAGGCTTTaGAGATCAGTCTATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DETLKHTNTHTHTHTHTHQMDRL*RSVYLQ Trigger: TTGCAGATAGACTGATCTCAAAAGCCTGTCCATTTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGTGTGTTTCAGTGTTTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | GTGCAAACAGATTACTTAGCAATTAAGAAACAACTACTGCTTTGTAGGGGCGATTTTGTAGGGGCGATTTaGAGCCTAAGTGCTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VQTDYLAIKKQLLLCRGDFVGAI*SLSAAV Trigger: AACAGCAGCACTTAGGCTCAAAATCGCCCCTACAAA...ATCGCCCCTACAAAGCAGTAGTTGTTTCTTAATTGCTAAGTAATCTGTTTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | AACTTTAAGTCTGCCTATGCTCTTTTGTTGCTTCATGGTCAGGCAGGTCACCTTCCACTGGACCCAATTTaGGAAAAACTATTAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: NFKSAYALLLLHGQAGHLPLDPI*EKLLGI Trigger: AATACCTAATAGTTTTTCCAAAATTGGGTCCAGTGG...AAGGTGACCTGCCTGACCATGAAGCAACAAAAGAGCATAGGCAGACTTAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS-3UTR CAA 90 bp | CAAATCATCCTCTGCTCAAACTACTATAAACTGGCAGCTGTAATTTCTAGAAATCCAAAAGGATTAGAGTaGTTCCCCGGCCTTCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QIILCSNYYKLAAVISRNPKGLE*FPGLHE Trigger: CTCATGAAGGCCGGGGAACAACTCTAATCCTTTTGG...ATTTCTAGAAATTACAGCTGCCAGTTTATAGTAGTTTGAGCAGAGGATGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS GCA 90 bp | TTCATAAGGATGAGAGAACTGCAGAACAACCAGAAGTCAGTTTTATaGTTCTTCTTGTTCTGGATAATTCAGAATTTTGCGGTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIRMRELQNNQKSVL*FFLFWIIQNFAVCL Trigger: CAGGCACACCGCAAAATTCTGAATTATCCAGAACAAGAAGAAGCATAAAACTGACTTCTGGTTGTTCTGCAGTTCTCTCATCCTTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS CCA 72 bp | CCCGTCACCCAGCTTCCCGGGGCAGCTCCGCTAGCCTaGCGGCGGCGGTGCAGGGCCTGCGGGAGTCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PVTQLPGAAPLA*RRRCRACGSPA Trigger: CGCCGGACTCCCGCAGGCCCTGCACCGCCGCCGCCAGGCTAGCGGAGCTGCCCCGGGAAGCTGGGTGACGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS CCA 72 bp | CCGGGTTCCCGTCCGTCGGCCCGAGGTTCCGGTCCATaGACCGCGGGCGCCGAGTTGCTGCCGGCGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSRPSARGSGP*TAGAELLPAEE Trigger: CTCCTCCGCCGGCAGCAACTCGGCGCCCGCGGTCCATGGACCGGAACCTCGGGCCGACGGACGGGAACCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS CCA 72 bp | ACCCAGCAACTTCTGTCCAGCATCTGCTGTAGGGCTTaGTCCGGCATCTTCCGCGGAGCCGGCGCACACGGC | + |
|
Preference number: 6 (lower is better) Translates to: TQQLLSSICCRA*SGIFRGAGAHG Trigger: GCCGTGTGCGCCGGCTCCGCGGAAGATGCCGGACCAAGCCCTACAGCAGATGCTGGACAGAAGTTGCTGGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS TCA 72 bp | TGCTTTTCATCCACCCAGCGTTGTAGACAGGCCTGGTaGACCCATTTTGTAGATCCTCTGCACCTGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: CFSSTQRCRQAW*THFVDPLHLHG Trigger: ACCATGCAGGTGCAGAGGATCTACAAAATGGGTTCACCAGGCCTGTCTACAACGCTGGGTGGATGAAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358935.3 ENST00000467521.6 |
||
| CDS TCA 72 bp | ACAAGGGCTCCACACAAGATTCGAGTAGCAGAGACATaGTCTGCTAAAGGATTGGCCTCAGCTGGAATTCGA | + |
|
Preference number: 6 (lower is better) Translates to: TRAPHKIRVAET*SAKGLASAGIR Trigger: TCGAATTCCAGCTGAGGCCAATCCTTTAGCAGATCATGTCTCTGCTACTCGAATCTTGTGTGGAGCCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358935.3 ENST00000467521.6 ENST00000492319.1 |
||
| CDS GCA 72 bp | AATCCCACTGGCAAGAGGGACAGGTGTGATGATTCATaGATATGCCAGGAGAGAAAGCACCTACAACATAGT | + |
|
Preference number: 6 (lower is better) Translates to: NPTGKRDRCDDS*ICQERKHLQHS Trigger: ACTATGTTGTAGGTGCTTTCTCTCCTGGCATATGCATGAATCATCACACCTGTCCCTCTTGCCAGTGGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492319.1 |
||
| CDS GCA 72 bp | ACCTTCTTTATGACCTACAACCTGCATCACTGTCACTaGTCCATAAGTCACAGCTGTCCAATAGATAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFFMTYNLHHCH*SISHSCPIDRA Trigger: GGCTCTATCTATTGGACAGCTGTGACTTATGGAGCAGTGACAGTGATGCAGGTTGTAGGTCATAAAGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358935.3 ENST00000462465.1 ENST00000467521.6 |
||
| CDS GCA 72 bp | ACTGGCAAGAGGGACAGGTGTGATGATTCATGCATATaGCAGGAGAGAAAGCACCTACAACATAGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TGKRDRCDDSCI*QERKHLQHSSK Trigger: TTTGGAACTATGTTGTAGGTGCTTTCTCTCCTGGCATATGCATGAATCATCACACCTGTCCCTCTTGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492319.1 |
||
| CDS CAA 72 bp | CGACCATTATTCCTGCTGCAGCAAATGGACAGGCTTTaGAGATCAGTCTATCTGCAAGATCCAAGACGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: RPLFLLQQMDRL*RSVYLQDPRRK Trigger: TTTACGTCTTGGATCTTGCAGATAGACTGATCTCAAAAGCCTGTCCATTTGCTGCAGCAGGAATAATGGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358935.3 ENST00000462465.1 ENST00000467521.6 |
||
| CDS CAA 72 bp | CTGCAGAACAACCAGAAGTCAGTTTTATGCTTCTTCTaGTTCTGGATAATTCAGAATTTTGCGGTGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQNNQKSVLCFF*FWIIQNFAVCL Trigger: CAGGCACACCGCAAAATTCTGAATTATCCAGAACAAGAAGAAGCATAAAACTGACTTCTGGTTGTTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS TCA 72 bp | AATTTTGGAAAAACTATTAGGTATTCAGCATTGCACTaGGGACATGCCACTCTGGCTGTACTGTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NFGKTIRYSALH*GHATLAVLFPL Trigger: AAGAGGAAACAGTACAGCCAGAGTGGCATGTCCTCAGTGCAATGCTGAATACCTAATAGTTTTTCCAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358935.3 ENST00000467521.6 |
||
| CDS GCA 72 bp | ATGAGAGAACTGCAGAACAACCAGAAGTCAGTTTTATaGTTCTTCTTGTTCTGGATAATTCAGAATTTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: MRELQNNQKSVL*FFLFWIIQNFA Trigger: CGCAAAATTCTGAATTATCCAGAACAAGAAGAAGCATAAAACTGACTTCTGGTTGTTCTGCAGTTCTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358935.3 |
||
| CDS TCA 72 bp | CATCACCATACTACAGGAACAAAAAGTCCAGACATTTaGTTTAGATTTCACAGCAAGACAATTTCTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: HHHTTGTKSPDI*FRFHSKTISVM Trigger: CATCACAGAAATTGTCTTGCTGTGAAATCTAAATCAAATGTCTGGACTTTTTGTTCCTGTAGTATGGTGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492319.1 |
||