RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARCHF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000144583

Ensembl transcript IDs: ENST00000273067.5

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTaGCAGCTCACCCGTGCCTCCTCCTTTTCTGGCTGCCTGCAGAAC +
Preference number: 1 (lower is better)
Translates to: LPIQMSPGAPKAVCP*QLTRASSFSGCLQN
Trigger: GTTCTGCAGGCAGCCAGAAAAGGAGGAGGCACGGGTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 90 bp TCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTaGCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAGACAAG +
Preference number: 1 (lower is better)
Translates to: SQPLQLLSWKPVGQG*PTVRGLGLCMCQDK
Trigger: CTTGTCTTGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 90 bp CAGGCTTTGCCTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTaGAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGC +
Preference number: 1 (lower is better)
Translates to: QALPALSLCFFGYLA*RCIGAGFFCWARFS
Trigger: GCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAGGCAAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 90 bp CGCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTaGCTCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCA +
Preference number: 1 (lower is better)
Translates to: RGKEQGAQSTEHQPD*LFGEGSKQGGFQAA
Trigger: TGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 90 bp TTGCCTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTaGATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTAT +
Preference number: 1 (lower is better)
Translates to: LPALSLCFFGYLACR*IGAGFFCWARFSLY
Trigger: ATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 90 bp TGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTaGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCAC +
Preference number: 1 (lower is better)
Translates to: CPQPLLLRVPCLQVH*GRVFLLGQVQPVLH
Trigger: GTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 90 bp CTGTGCATGTGCCAAGACAAGAAGGGGCTGGCATTGCACATGTCCTaGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTG +
Preference number: 1 (lower is better)
Translates to: LCMCQDKKGLALHMS*PWWGWVVGKVAPGL
Trigger: CAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACATGTGCAATGCCAGCCCCTTCTTGTCTTGGCACATGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 90 bp GGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTaGGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: GFQTGRVPSSKEYLD*ALLHSLGHTGQAPP
Trigger: GGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR TCA 90 bp GACAGTGTCCTTTTAATACCCATGGATGACGCGACCACTGTGCAGTaGCAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: DSVLLIPMDDATTVQ*QPETLQVNTQWPSL
Trigger: CAGGGAAGGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCGTCATCCATGGGTATTAAAAGGACACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 90 bp TTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTaGGCCAGGTTCAGCCTGTATTGCACTTTGTTGTTGAGTTGGTGT +
Preference number: 1 (lower is better)
Translates to: FGYLACRCIGAGFFC*ARFSLYCTLLLSWC
Trigger: ACACCAACTCAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR TCA 90 bp TTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTaGAGCCACAGCAGCAGAACTGTGCTTGAAATATCCACTGGAAAT +
Preference number: 1 (lower is better)
Translates to: LGSWESCSGIDSFQS*SHSSRTVLEISTGN
Trigger: ATTTCCAGTGGATATTTCAAGCACAGTTCTGCTGCTGTGGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTCTCTGGGGGTGCCACTaGACCTCCCCACCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: AAALLEARRSGVPYREGTLWGCH*TSPPCS
Trigger: GGAGCAGGGTGGGGAGGTGCAGTGGCACCCCCAGAG...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCCGGGCCCTCAGTGGTaGTCATGGCCTTCCTTCCGG +
Preference number: 2 (lower is better)
Translates to: APLGPPGYAGRSREHKALPGPQW*SWPSFR
Trigger: CCGGAAGGAAGGCCATGACCACCACTGAGGGCCCGG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCACTGCCAGCTCACCCGTaGCTCCTCCTTTTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPLPAHP*LLLFWL
Trigger: CAGCCAGAAAAGGAGGAGGCACGGGTGAGCTGGCAG...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCACTTCTTCGGGTACCTTaGCTGCAGGTGCATTGGGGC +
Preference number: 2 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPLLRVP*LQVHWG
Trigger: GCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAG...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTCTTGGCCTCCGGCACTaGCACAGTCACACAGGCTTT +
Preference number: 2 (lower is better)
Translates to: AAALLEARRSGVPYREGTLGLRH*HSHTGF
Trigger: AAAGCCTGTGTGACTGTGGCAGTGCCGGAGGCCAAG...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTAGAAGGGGCTGGCATTaGACATGTCCTGGCCATGGT +
Preference number: 2 (lower is better)
Translates to: AAALLEARRSGVPYREGTRRGWH*TCPGHG
Trigger: ACCATGGCCAGGACATGTGCAATGCCAGCCCCTTCT...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR TCA 90 bp CTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTTGCCCATCCAAATaGGCCCAGGAGCCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: LLHSLGHTGQAPPNHCSCSCPSK*AQEPQR
Trigger: CCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGA...GCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACATGTTGGCTCTGGGGGTaGCACTGCACCTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTCWLWG*HCTSPP
Trigger: GGGTGGGGAGGTGCAGTGGCACCCCCAGAGCCAACA...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGCCTCAGTGGTGGTCATaGCCTTCCTTCCGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: AGRSREHKALSISLTASLPQWWS*PSFRAS
Trigger: AGAGGCCCGGAAGGAAGGCCATGACCACCACTGAGG...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAGCAGGGTTTTTCTGTTaGGCCAGGTTCAGCCTGTAT +
Preference number: 2 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPAGFFC*ARFSLY
Trigger: ATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGC...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCCCTGCCCTCAGCCTCTaGTTCTTCGGGTACCTTGCC +
Preference number: 2 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPPALSL*FFGYLA
Trigger: GGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAGG...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp CTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATaGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCA +
Preference number: 2 (lower is better)
Translates to: LPSASASSGTLPAGA*GQGFSVGPGSACIA
Trigger: TGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTAGGTCCCCCACCCTCTaGCTGCTCCCTCTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSRSPTL*LLPLLA
Trigger: AGCCAACAGAGGGAGCAGGCAGAGGGTGGGGGACCT...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCCCTTTTCTGGCTGCCTaGAGAACACAGCCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAPFLAA*RTQPQE
Trigger: CTCCTGGGGCTGTGTTCTGCAGGCAGCCAGAAAAGG...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCCCTCTGTTGGCTCTaGGGGTGCCACTGCACCTCC +
Preference number: 2 (lower is better)
Translates to: GRVPNREGSKQQGILRLGSLCWL*GCHCTS
Trigger: GGAGGTGCAGTGGCACCCCCAGAGCCAACAGAGGGA...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR TCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCAGCAGAACTGTGCTTaGAATATCCACTGGAAATCT +
Preference number: 2 (lower is better)
Translates to: APLGPPGYAGRSREHKALQQNCA*NIHWKS
Trigger: AGATTTCCAGTGGATATTTCAAGCACAGTTCTGCTG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR TCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGGACAGCTTCCAAAGCTaGAGCCACAGCAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: AGRSREHKALSISLTASLDSFQS*SHSSRT
Trigger: AGTTCTGCTGCTGTGGCTTCAGCTTTGGAAGCTGTC...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTTCGGGTACCTTGCCTaGAGGTGCATTGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GRVPNREGSKQQGILRLGFGYLA*RCIGAG
Trigger: CCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAA...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAGCCTGCTCCCTCTGTTaGCTCTGGGGGTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: SLGRVPNREGSKQQGILRACSLC*LWGCHC
Trigger: GCAGTGGCACCCCCAGAGCCAACAGAGGGAGCAGGC...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp TCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATaGACAGCTTCCAAAGCTGAAGCCACAGCAGCAGAACTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SWPWWGWVVGKVAPG*TASKAEATAAELCL
Trigger: CAAGCACAGTTCTGCTGCTGTGGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp AGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTaGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATA +
Preference number: 2 (lower is better)
Translates to: RSREHKALSISLTAS*GRVPNREGSKQQGI
Trigger: TATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAAAGGCAGTGTGTCCCTaGCAGCTCACCCGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SLGRVPNREGSKQQGILRKAVCP*QLTRAS
Trigger: GGAGGCACGGGTGAGCTGGCAGGGACACACTGCCTT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTAGATGCTTTTCCTCTTaGCCCCCTTGGCCTCCGGCA +
Preference number: 2 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSRCFSS*PPWPPA
Trigger: TGCCGGAGGCCAAGGGGGCCAAGAGGAAAAGCATCT...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp AGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATaGGGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RVPNREGSKQQGILR*GSTPLLGAHWSSSS
Trigger: GGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR TCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGGAGAGTGGCATTGACTaGTTGGAAATAGCAGAACTG +
Preference number: 2 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQESGID*LEIAEL
Trigger: CAGTTCTGCTATTTCCAATCAGTCAATGCCACTCTC...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCGGTAGTTGGGAAAGTTaGTCCGGGATTGACAGCTTC +
Preference number: 2 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAGSWES*SGIDSF
Trigger: GAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACC...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTCCGGGCCCTCAGTaGTGGTCATGGCCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVAPGPQ*WSWPSF
Trigger: GAAGGAAGGCCATGACCACCACTGAGGGCCCGGAGC...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp CTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTaGGGCCAGGTTCAGCCTGTATTGCACTTTGTTGTTGAGTTGGTG +
Preference number: 2 (lower is better)
Translates to: LRVPCLQVHWGRVFL*GQVQPVLHFVVELV
Trigger: CACCAACTCAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR TCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGTGTGGAGAGTGGCATTaGCTGATTGGAAATAGCAGA +
Preference number: 2 (lower is better)
Translates to: AGRSREHKALSISLTASLCGEWH*LIGNSR
Trigger: TCTGCTATTTCCAATCAGTCAATGCCACTCTCCACA...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR TCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGACAGCATATCCCTCCCTaGGCATCCCTCCCTGACCAT +
Preference number: 2 (lower is better)
Translates to: SLGRVPNREGSKQQGILRQHIPP*ASLPDH
Trigger: ATGGTCAGGGAGGGATGCTCAGGGAGGGATATGCTG...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp CTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCAGGTTCAGCCTGTATTaGACTTTGTTGTTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LLHSLGHTGQAPPNHCSCRFSLY*TLLLSW
Trigger: CCAACTCAACAACAAAGTGCAATACAGGCTGAACCT...GCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCATGTCCTGGCCATGGTaGGGTTGGGTAGTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: GRVPNREGSKQQGILRLGMSWPW*GWVVGK
Trigger: TTTCCCAACTACCCAACCCCACCATGGCCAGGACAT...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCTACTCCACTCGCATTGCACATGTCCTaGCCATGGTGGGGTTGGGTA +
Preference number: 2 (lower is better)
Translates to: NREGSKQQGILRLGSTPLALHMS*PWWGWV
Trigger: TACCCAACCCCACCATGGCCAGGACATGTGCAATGC...GAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCATCGGGAGTTCCATTTaGAAGTTCCTTCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: GRVPNREGSKQQGILRLGIGSSI*KFLQEG
Trigger: TCCTTCCTGAAGGAACTTCCAAATGGAACTCCCGAT...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR GCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCACAGCAGCAGAACTGTaGTTGAAATATCCACTGGAA +
Preference number: 2 (lower is better)
Translates to: GWVVGKVAPGLTASKAEATAAEL*LKYPLE
Trigger: TTCCAGTGGATATTTCAAGCACAGTTCTGCTGCTGT...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp GCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCACTTTGTaGTTGAGTTGGTGTTGGTTTTCATTGTTGTTGTGGAGAGTGGCA +
Preference number: 2 (lower is better)
Translates to: AGFFCWARFSLYCTL*LSWCWFSLLLWRVA
Trigger: TGCCACTCTCCACAACAACAATGAAAACCAACACCAACTCAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCTTTTCATTGTTGTTGTaGAGAGTGGCATTGACTGAT +
Preference number: 2 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAFSLLL*RVALTD
Trigger: ATCAGTCAATGCCACTCTCCACAACAACAATGAAAA...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 90 bp GGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCACTTTGTTGTaGAGTTGGTGTTGGTTTTCATTGTTGTTGTGGAGAGTGGCATTG +
Preference number: 2 (lower is better)
Translates to: GFFCWARFSLYCTLL*SWCWFSLLLWRVAL
Trigger: CAATGCCACTCTCCACAACAACAATGAAAACCAACACCAACTCAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCACTTTGTTGTTGAGTTaGTGTTGGTTTTCATTGTTG +
Preference number: 2 (lower is better)
Translates to: GWVVGKVAPGLTASKAEATLLLS*CWFSLL
Trigger: CAACAATGAAAACCAACACCAACTCAACAACAAAGT...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp CAGAGCGAGCAGGAGGGGTCCAGGGGTAGTGCTCCCTaGCAGGCACCCTTGGGCCCACCTGGCTACGCGGGA +
Preference number: 3 (lower is better)
Translates to: QSEQEGSRGSAP*QAPLGPPGYAG
Trigger: TCCCGCGTAGCCAGGTGGGCCCAAGGGTGCCTGGCAGGGAGCACTACCCCTGGACCCCTCCTGCTCGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp TCTGCCTGCTCCCTCTGTTGGCTCTGGGGGTGCCACTaGACCTCCCCACCCTGCTCCGGGCCCTCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: SACSLCWLWGCH*TSPPCSGPSVV
Trigger: CACCACTGAGGGCCCGGAGCAGGGTGGGGAGGTGCAGTGGCACCCCCAGAGCCAACAGAGGGAGCAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp CTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTaGCCTACCGTGAGGGGACTGGGTCTGTGCATGTGC +
Preference number: 3 (lower is better)
Translates to: LQLLSWKPVGQG*PTVRGLGLCMC
Trigger: GCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp CAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTaGCAGCTCACCCGTGCCTCCTCCTTTTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: QMSPGAPKAVCP*QLTRASSFSGC
Trigger: GCAGCCAGAAAAGGAGGAGGCACGGGTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGGCTTCTTCGGGTACCTaGCCTGCAGGTGCATTGGGG +
Preference number: 3 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQASSGT*PAGALG
Trigger: CCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGC...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp CCTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTaGAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: PALSLCFFGYLA*RCIGAGFFCWA
Trigger: GGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp GGTGAGAGCAGAGCAGACCACAGATGCTTTTCCTCTTaGCCCCCTTGGCCTCCGGCACTGCCACAGTCACAC +
Preference number: 3 (lower is better)
Translates to: GESRADHRCFSS*PPWPPALPQSH
Trigger: GTGTGACTGTGGCAGTGCCGGAGGCCAAGGGGGCCAAGAGGAAAAGCATCTGTGGTCTGCTCTGCTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp GACTGGGTCTGTGCATGTGCCAAGACAAGAAGGGGCTaGCATTGCACATGTCCTGGCCATGGTGGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: DWVCACAKTRRG*HCTCPGHGGVG
Trigger: CCCAACCCCACCATGGCCAGGACATGTGCAATGCCAGCCCCTTCTTGTCTTGGCACATGCACAGACCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGATTTGTCAGCGAATCTaGCCCATCCAAATGAGCCCA +
Preference number: 3 (lower is better)
Translates to: APLGPPGYAGRSREHKALICQRI*PIQMSP
Trigger: TGGGCTCATTTGGATGGGCAAGATTCGCTGACAAAT...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp CTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCCATCCCCACAGCCATTaGTCAGCGAATCTTGCCCAT +
Preference number: 3 (lower is better)
Translates to: LLHSLGHTGQAPPNHCSCHPHSH*SANLAH
Trigger: ATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATG...GCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp CTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTaGATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: LSLCFFGYLACR*IGAGFFCWARF
Trigger: GAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR GCA 72 bp GAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTaGCTCTTTGGGGAGGGTTCCAAACAGGGAGGGTTC +
Preference number: 3 (lower is better)
Translates to: EQGAQSTEHQPD*LFGEGSKQGGF
Trigger: GAACCCTCCCTGTTTGGAACCCTCCCCAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp CCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTaGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PLLLRVPCLQVH*GRVFLLGQVQP
Trigger: AGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp GGGCTGGCATTGCACATGTCCTGGCCATGGTGGGGTTaGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCT +
Preference number: 3 (lower is better)
Translates to: GLALHMSWPWWG*VVGKVAPGLTA
Trigger: AGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACATGTGCAATGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATGCCTGCTCCCTCTGTaGGCTCTGGGGGTGCCACTG +
Preference number: 3 (lower is better)
Translates to: SLGRVPNREGSKQQGILRCLLPL*ALGVPL
Trigger: CAGTGGCACCCCCAGAGCCAACAGAGGGAGCAGGCA...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCGGCAGGGTTTTTCTGTaGGGCCAGGTTCAGCCTGTA +
Preference number: 3 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAGRVFL*GQVQPV
Trigger: TACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCC...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp CTTAGATTGGGCTCTACTCCACTCCTTGGGGCACACTaGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LRLGSTPLLGAH*SSSSQPLQLLS
Trigger: AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCCCAATCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCTACTCCACTCCAGATGCTTTTCCTCTaGGCCCCCTTGGCCTCCGGC +
Preference number: 3 (lower is better)
Translates to: NREGSKQQGILRLGSTPLQMLFL*APLASG
Trigger: GCCGGAGGCCAAGGGGGCCAAGAGGAAAAGCATCTG...GAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTAAAGTTGCTCCGGGATaGACAGCTTCCAAAGCTGAA +
Preference number: 3 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSKVAPG*TASKAE
Trigger: TTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTT...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp TGGAAGTTCCTTCAGGAAGGAGACACACTCTCCCTCTaGCTGCTCACACCAGCATATCCCTCCCTGAGCATC +
Preference number: 3 (lower is better)
Translates to: WKFLQEGDTLSL*LLTPAYPSLSI
Trigger: GATGCTCAGGGAGGGATATGCTGGTGTGAGCAGCCAGAGGGAGAGTGTGTCTCCTTCCTGAAGGAACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp TGCCAAGACAAGAAGGGGCTGGCATTGCACATGTCCTaGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCT +
Preference number: 3 (lower is better)
Translates to: CQDKKGLALHMS*PWWGWVVGKVA
Trigger: AGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACATGTGCAATGCCAGCCCCTTCTTGTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGTTGTTGAGTTGGTGTaGGTTTTCATTGTTGTTGTG +
Preference number: 3 (lower is better)
Translates to: AAALLEARRSGVPYREGTVVELV*VFIVVV
Trigger: CACAACAACAATGAAAACCAACACCAACTCAACAAC...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CCA 72 bp CTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTaGGCCAGGTTCAGCCTGTATTGCACTTTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: LACRCIGAGFFC*ARFSLYCTLLL
Trigger: CAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCTGGTGTTGGTTTTCATaGTTGTTGTGGAGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAWCWFS*LLWRVA
Trigger: TGCCACTCTCCACAACAACAATGAAAACCAACACCA...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp CTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCCTGTATTGCACTTTGTaGTTGAGTTGGTGTTGGTTT +
Preference number: 3 (lower is better)
Translates to: LLHSLGHTGQAPPNHCSCLYCTL*LSWCWF
Trigger: AAACCAACACCAACTCAACAACAAAGTGCAATACAG...GCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCCAGGTTCAGCCTGTATaGCACTTTGTTGTTGAGTTG +
Preference number: 3 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAQVQPV*HFVVEL
Trigger: CAACTCAACAACAAAGTGCAATACAGGCTGAACCTG...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGTTGCCTGCAGGTGCATaGGGGCAGGGTTTTTCTGTT +
Preference number: 3 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKLPAGA*GQGFSV
Trigger: AACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAA...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR TCA 72 bp TGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTaGAGCCACAGCAGCAGAACTGTGCTTGAAATATCC +
Preference number: 3 (lower is better)
Translates to: WESCSGIDSFQS*SHSSRTVLEIS
Trigger: GGATATTTCAAGCACAGTTCTGCTGCTGTGGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR TCA 72 bp CTTTTAATACCCATGGATGACGCGACCACTGTGCAGTaGCAACCAGAAACTTTGCAGGTGAACACCCAGTGG +
Preference number: 3 (lower is better)
Translates to: LLIPMDDATTVQ*QPETLQVNTQW
Trigger: CCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCGTCATCCATGGGTATTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATATTGCACTTTGTTGTaGAGTTGGTGTTGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSYCTLL*SWCWFS
Trigger: TGAAAACCAACACCAACTCAACAACAAAGTGCAATA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR-3UTR CAA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAAGCCTGTATTGCACTTaGTTGTTGAGTTGGTGTTGG +
Preference number: 3 (lower is better)
Translates to: SLGRVPNREGSKQQGILRSLYCT*LLSWCW
Trigger: CCAACACCAACTCAACAACAAAGTGCAATACAGGCT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGGCGCCCGGGCAGCGCTaGCATGCAACCAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALAPGQR*HATRGE
Trigger: CTCGCCTCTGGTTGCATGGCAGCGCTGCCCGGGCGC...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCAGGAGGGGGCTCCCTaGCCACCACTTCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALQEGAP*PPLLGG
Trigger: GCCCCCGAGAAGTGGTGGGCAGGGAGCCCCCTCCTG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTCTCCGGCTCGTCCTCTaGCTGCTGCCCGCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: AAALLEARRSGVPYREGTLRLVL*LLPAVR
Trigger: CCGGACGGCGGGCAGCAGCCAGAGGACGAGCCGGAG...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGGGGGGTCGCCGTGCATaGGCAGGGGCGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALGGRRA*AGALEE
Trigger: CTCCTCAAGCGCCCCTGCCCATGCACGGCGACCCCC...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCCAAAGGGGTGGTGCTaGAAGGGAGGTGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALPKGWC*KGGGGA
Trigger: CGCCCCGCCACCTCCCTTCCAGCACCACCCCTTTGG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAGGGGTGCCCTACCGTaGGGGGACTGGGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPRGALP*GDWVCA
Trigger: TGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGCGCGCGTCACGCTCGTaGGGGCCTGACGCAGACGCC +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGRASRS*GPDADA
Trigger: GGCGTCTGCGTCAGGCCCCCACGAGCGTGACGCGCG...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACGTCCGGGCGGGCGAGTaGCCTCGCCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHVRAGE*PRLLLL
Trigger: GAGGAGGAGAAGGCGAGGCCACTCGCCCGCCCGGAC...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGGCCTGCTCCCTCTGTTaGCTCTGGGGGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALACSLC*LWGCHC
Trigger: GCAGTGGCACCCCCAGAGCCAACAGAGGGAGCAGGC...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACTGCGGCAGCGGCACTTaGGGAGACCCTGGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHCGSGT*GDPGGA
Trigger: TGCGCCACCAGGGTCTCCTCAAGTGCCGCTGCCGCA...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGGGCGGAGGCGACTGCTaGTCGGCGTCCGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGGGGDC*SASGCL
Trigger: GAGACACCCGGACGCCGAGCAGCAGTCGCCTCCGCC...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAGGTCCCCCACCCTCTaGCTGCTCCCTCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPRSPTL*LLPLLA
Trigger: AGCCAACAGAGGGAGCAGGCAGAGGGTGGGGGACCT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTCCGGGCCCTCAGTGGTaGTCATGGCCTTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AAALLEARRSGVPYREGTPGPQW*SWPSFR
Trigger: CCGGAAGGAAGGCCATGACCACCACTGAGGGCCCGG...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAGCTCCGGGCCCTCAGTaGTGGTCATGGCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPAPGPQ*WSWPSF
Trigger: GAAGGAAGGCCATGACCACCACTGAGGGCCCGGAGC...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCAGGTGAACACCCAGTaGCCTTCCCTGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALQVNTQ*PSLAGS
Trigger: GGACCCTGCCAGGGAAGGCCACTGGGTGTTCACCTG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGTCTGCTCGGCAGCTCTaGCCCCGCTACCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: LPSASASSGTLPAGALGQSARQL*PRYPHQ
Trigger: TTGGTGGGGGTAGCGGGGGCAGAGCTGCCGAGCAGA...CTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATCGTCCTCTGGCTGCTaGCCGCCGTCCGGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSSSSGC*PPSGAV
Trigger: GACCGCGCCGGACGGCGGGCAGCAGCCAGAGGACGA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTGCTCAGGGGCAGGGGTaGCTGCGGTCTCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSAQGQG*LRSPLP
Trigger: CGGAAGAGGAGACCGCAGGCACCCCTGCCCCTGAGC...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGTTCGGGTACCTTGCCTaGAGGTGCATTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALFGYLA*RCIGAG
Trigger: CCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAA...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGAGGCAGCCGGCACTTaGCTCCAGCTTGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LPSASASSGTLPAGALGQEAAGT*LQLGPR
Trigger: GCGAGGACCAAGCTGGAGCCAAGTGCCGGCTGCCTC...CTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAGGAGGTCCGGGGGTTaGTCCTGCCTCCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPRRSGG*SCLLPF
Trigger: AAAAGGCAGGAGGCAGGACCAACCCCCGGACCTCCT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCAGCATATCCCTCCCTaGGCATCCCTCCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALQHIPP*ASLPDH
Trigger: ATGGTCAGGGAGGGATGCTCAGGGAGGGATATGCTG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCCGGGCAGCGCTGCCATaGAACCAGAGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVARAALP*NQRRGR
Trigger: CCGGCCTCGCCTCTGGTTGCATGGCAGCGCTGCCCG...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGCAGTCGGCAAATCCGTaGCGCCCTCCCCTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGQSANP*RPPLGS
Trigger: GGAACCGAGGGGAGGGCGCCACGGATTTGCCGACTG...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAAGAGAGCAGTTGGGTaGGGGAGGGGTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPKRAVG*GRGVAG
Trigger: ACCTGCAACACCCCTCCCCCACCCAACTGCTCTCTT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGGCAGATGCGGCAGAGTaGGGTCCTCATACCACTGTC +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALADAAE*GPHTTV
Trigger: GACAGTGGTATGAGGACCCCACTCTGCCGCATCTGC...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTGCCATCACAGCGGCATaGGCTCAGCAGCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSAITAA*AQQLPL
Trigger: CAGGGGGAGCTGCTGAGCCCATGCCGCTGTGATGGC...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAAGAGGGCCTGAGGGGTaGCCGGCAGCCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTRGPEG*PAAWAG
Trigger: CCCTGCCCAGGCTGCCGGCCACCCCTCAGGCCCTCT...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGCTGAGGAGGCACTGCTaGGCAGCGAGGCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGRSREHKALSISLTASLLRRHC*AARQVA
Trigger: AGCCACCTGCCTCGCTGCTCAGCAGTGCCTCCTCAG...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGGCTGGTGTGTGCACTTaGCCGAGCCATCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQAGVCT*PSHHSG
Trigger: GCCGCTGTGATGGCTCGGTCAAGTGCACACACCAGC...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTTCCCAAAGGGGTGGTaGTGGAAGGGAGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGFPKGW*WKGGGG
Trigger: CCCGCCACCTCCCTTCCAGCACCACCCCTTTGGGAA...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCGCGGAGGAGGGCGGCTaGCGGGTCTGCTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRVPNREGSKQQGILRLGAEEGG*RVCSAA
Trigger: AGCTGCCGAGCAGACCCGGCAGCCGCCCTCCTCCGC...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp CTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTaGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAG +
Preference number: 4 (lower is better)
Translates to: LVKLLPTTAAAL*EARRSGVPYRE
Trigger: CTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAACGCTCGTGGGGGCCTaGCGCAGACGCCGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRTLVGA*RRRRGG
Trigger: CCCTCCGCGGCGTCTGCGTCAGGCCCCCACGAGCGT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGGAGGGGTGTTGCAGGTaGAACTGGGCTAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGEGCCR*NWARGL
Trigger: CAAGCCCCTAGCCCAGTTTCACCTGCAACACCCCTC...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGATTGGCCTGGGTGGATaGGGAGGTCCGGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AGRSREHKALSISLTASLIGLGG*GGPGVG
Trigger: ACCAACCCCCGGACCTCCTCATCCACCCAGGCCAAT...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGGCGACCACTGTGCAGTaGCAACCAGAAACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALATTVQ*QPETLQ
Trigger: CTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGC...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCCTCGTCTTCCGCCGTTaGTCAGCACCCGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCLVFRR*SAPAAA
Trigger: GGCAGCGGCGGGTGCTGAGCAACGGCGGAAGACGAG...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCAGAAGGTCTTGGCGCTaGCATCTTGCCGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLHSLGHTGQAPPNHCSCRRSWR*HLAEGL
Trigger: CAGCCCCTCGGCAAGATGGCAGCGCCAAGACCTTCT...GCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGTACCTTGCCTGCAGGTaGATTGGGGCAGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALYLACR*IGAGFF
Trigger: GAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTA...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACCTTCTTCGGGTACCTTaGCTGCAGGTGCATTGGGGC +
Preference number: 4 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHLLRVP*LQVHWG
Trigger: GCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAG...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTCTGGGTCTGTGCATGTaGCAAGACAAGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAALLEARRSGVPYREGTLGLCM*QDKKGL
Trigger: CAGCCCCTTCTTGTCTTGGCACATGCACAGACCCAG...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAGGGGACTGGGTCTGTaGATGTGCCAAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPRGLGL*MCQDKK
Trigger: CTTCTTGTCTTGGCACATGCACAGACCCAGTCCCCT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCACCCGTAGGTCAGGGGTaGCCTACCGTGAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSPVGQG*PTVRGL
Trigger: CAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGG...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCGCCGCTGCCCCCACTaGCTCGATTCCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QPLLLRVPCLQVHWGRVFRRCPH*LDSQRG
Trigger: ACCCCTTTGGGAATCGAGCCAGTGGGGGCAGCGGCG...AAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCGCAGTGTGGCCGAGGTaGGAGGCAGCCGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCAVWPR*EAAGTW
Trigger: CCAAGTGCCGGCTGCCTCCCACCTCGGCCACACTGC...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGAGATGCTTTTCCTCTTaGCCCCCTTGGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LPSASASSGTLPAGALGQRCFSS*PPWPPA
Trigger: TGCCGGAGGCCAAGGGGGCCAAGAGGAAAAGCATCT...CTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAAGACAAGAAGGGGCTaGCATTGCACATGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPKTRRG*HCTCPG
Trigger: GCCAGGACATGTGCAATGCCAGCCCCTTCTTGTCTT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCGGCGGGGCGGCGAGCTaGCCGTCCGAGAACTGGAAA +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAGGAAS*PSENWK
Trigger: TTTCCAGTTCTCGGACGGTCAGCTCGCCGCCCCGCC...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTCTTACAGAAGTCATCTaGGGAGGCACTGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAALLEARRSGVPYREGTLTEVI*GGTAEQ
Trigger: CTGCTCAGCAGTGCCTCCTCAGATGACTTCTGTAAG...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTTACCACTGTCCAAGCTaGTGCCCAGTGAGTAGCGAT +
Preference number: 4 (lower is better)
Translates to: AAALLEARRSGVPYREGTYHCPS*CPVSSD
Trigger: ATCGCTACTCACTGGGCAGCAGCTTGGACAGTGGTA...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAGGTAGTTGGGAAAGTTaGTCCGGGATTGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPGSWES*SGIDSF
Trigger: GAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACC...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCCCTCTCCACCGCCTCTaGCTGGCTAGGCTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAPLHRL*LARLAV
Trigger: AACAGCGAGCCTAGCCAGCCAGAGGCGGTGGAGAGG...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGAGGTGGCTCTGTGGCTaGGCCACCCCAGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: AGRSREHKALSISLTASLRWLCG*ATPVIF
Trigger: GAAGATGACTGGGGTGGCCCAGCCACAGAGCCACCT...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATCCCTCTGTTGGCTCTaGGGGTGCCACTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSSLCWL*GCHCTS
Trigger: GGAGGTGCAGTGGCACCCCCAGAGCCAACAGAGGGA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACATCCTCTTGGCCCCCTTaGCCTCCGGCACTGCCACAG +
Preference number: 4 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTSSWPP*PPALPQ
Trigger: CTGTGGCAGTGCCGGAGGCCAAGGGGGCCAAGAGGA...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp GCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATaGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASASSGTLPAGA*GQGFSVGPGSA
Trigger: GGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGGTGAGTCACTGGTTCTaGACTCCACCTGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQVSHWF*TPPGKP
Trigger: GGGCTTTCCAGGTGGAGTTCAGAACCAGTGACTCAC...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTGTTGGTCCTGCCTCCTaGCTTTTGATCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSVGPAS*LLILQV
Trigger: GACCTGGAGGATCAAAAGGCAGGAGGCAGGACCAAC...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGTTCCTTCCGGGCCTCTaGTCTCACACTGTCGTGACT +
Preference number: 4 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQFLPGL*SHTVVT
Trigger: AGTCACGACAGTGTGAGAGCAGAGGCCCGGAAGGAA...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGATGACGCGACCACTGTaGAGTGACAACCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: APLGPPGYAGRSREHKALMTRPL*SDNQKL
Trigger: AAGTTTCTGGTTGTCACTGCACAGTGGTCGCGTCAT...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGGAGGAGAGGGGCGTGTaGGAGAGAACAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGRSREHKALSISLTASLEERGV*ERTGER
Trigger: CCTTTCTCCTGTTCTCTCCCACACGCCCCTCTCCTC...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCCCCTGTTCTGGCCCCTaGAAGCAGATGCGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAPCSGP*KQMRQS
Trigger: ACTCTGCCGCATCTGCTTCCAGGGGCCAGAACAGGG...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCAGAGGGAGCCCAGGATaGCGGCTGCAACCTGAACCT +
Preference number: 4 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVARGSPG*RLQPEP
Trigger: AGGTTCAGGTTGCAGCCGCCATCCTGGGCTCCCTCT...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTGGAAGAGAAGGTCTTaGCGCTGCCATCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLHSLGHTGQAPPNHCSCWKRRS*RCHLAE
Trigger: CTCGGCAAGATGGCAGCGCCAAGACCTTCTCTTCCA...GCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCGAGGGGATATTGGCCTaGGTGGATGAGGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPEGILA*VDEEVR
Trigger: CCGGACCTCCTCATCCACCCAGGCCAATATCCCCTC...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCCCTCAGTGGTGGTCATaGCCTTCCTTCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAPQWWS*PSFRAS
Trigger: AGAGGCCCGGAAGGAAGGCCATGACCACCACTGAGG...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTGCATTGCACATGTCCTaGCCATGGTGGGGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSALHMS*PWWGWV
Trigger: TACCCAACCCCACCATGGCCAGGACATGTGCAATGC...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGAAGAAATACTGGCGATaGGGAAGAGGGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGKKYWR*GRGSPG
Trigger: TCCTGGGCTCCCTCTTCCTCATCGCCAGTATTTCTT...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGGACAGCTTCCAAAGCTaGAGCCACAGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQDSFQS*SHSSRT
Trigger: AGTTCTGCTGCTGTGGCTTCAGCTTTGGAAGCTGTC...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGACCTCTCCTCGCAGATaGAACGAGGTAAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LPSASASSGTLPAGALGQTSPRR*NEVRLV
Trigger: AACAAGCCTTACCTCGTTGCATCTGCGAGGAGAGGT...CTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGTTCTCAGGCAAGAGTaGTTCTGGAGGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTVLRQE*FWRVGA
Trigger: CGCCCCCACCCTCCAGAAGCACTCTTGCCTGAGAAC...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGAGATCGTTTAACCCTTaGAGAGGCGCCTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQRSFNP*RGASFL
Trigger: CAGGAAGGAGGCGCCTCTGCAAGGGTTAAACGATCT...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGCTCTACTCCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGTTCAGCACTTTCCACTaGTGGTTGACAGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSTPLLGAHWSSSSQPLQFSTFH*WLTACH
Trigger: GTGGCAGGCTGTCAACCAGCAGTGGAAAGTGCTGAA...CTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCAAGGCAGTGTGTCCCTaGCAGCTCACCCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAKAVCP*QLTRAS
Trigger: GGAGGCACGGGTGAGCTGGCAGGGACACACTGCCTT...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTGAGCATCAGCCTGACTaGCTCTTTGGGGAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QPLLLRVPCLQVHWGRVFEHQPD*LFGEGS
Trigger: GGAACCCTCCCCAAAGAGGCAGTCAGGCTGATGCTC...AAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGGTGCTGGAAGGGAGGTaGCGGGGCGGCGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKVLEGR*RGGELT
Trigger: GGTCAGCTCGCCGCCCCGCCACCTCCCTTCCAGCAC...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACATCCACCGCCTCTGGCTaGCTAGGCTCGCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTSTASG*LGSLLL
Trigger: TAGCAACAGCGAGCCTAGCCAGCCAGAGGCGGTGGA...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCCAGCTCCCCCTGTTCTaGCCCCTGGAAGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: GRVPNREGSKQQGILRLGQLPLF*PLEADA
Trigger: CGCATCTGCTTCCAGGGGCCAGAACAGGGGGAGCTG...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCCAGAAACTTTGCAGGTaGACACCCAGTGGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPQKLCR*TPSGLP
Trigger: GGGAAGGCCACTGGGTGTTCACCTGCAAAGTTTCTG...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCGCCCAGGATGGCGGCTaGAACCTGAACCTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPAQDGG*NLNLLN
Trigger: ATTGAGAAGGTTCAGGTTGCAGCCGCCATCCTGGGC...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACATCCGGGGGTTGGTCCTaGCTCCTGCCTTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTSGGWS*LLPFDP
Trigger: AGGATCAAAAGGCAGGAGGCAGGACCAACCCCCGGA...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCTACTCCACTCTGTTGGCTCTGGGGGTaGCACTGCACCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: NREGSKQQGILRLGSTPLCWLWG*HCTSPP
Trigger: GGGTGGGGAGGTGCAGTGGCACCCCCAGAGCCAACA...GAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp ATGTCCTGGCCATGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACACACTTGGCTCCAGCTTaGTCCTCGCGACTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: MSWPWWGWVVGKVAPGLTHLAPA*SSRLPK
Trigger: TTTGGGGAGTCGCGAGGACCAAGCTGGAGCCAAGTG...TGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCATGGCCAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCCACTTGAGGAGACCCTaGTGGCGCAACATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAHLRRP*WRNIWG
Trigger: CCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTG...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCGGATATTGGCCTGGGTaGATGAGGAGGTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAGYWPG*MRRSGG
Trigger: ACCCCCGGACCTCCTCATCCACCCAGGCCAATATCC...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTTCAGGATGTGCAGGATaGTATAAGCACAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: AAALLEARRSGVPYREGTSGCAG*YKHSGD
Trigger: ATCACCACTGTGCTTATACCATCCTGCACATCCTGA...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp GAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTaGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: EHKALSISLTAS*GRVPNREGSKQ
Trigger: CTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTCAAGCTGCTGCCCAGTaGGTAGCGATCCTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSQAAAQ*VAILGL
Trigger: AAGACCGAGGATCGCTACTCACTGGGCAGCAGCTTG...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCCCTGAACCTTCTCAATaGCCGTCAGAGAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPPEPSQ*PSERWP
Trigger: AGGCCATCTCTCTGACGGTCATTGAGAAGGTTCAGG...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCATGGCGGCTGCAACCTaGACCTTCTCAATGACCGTC +
Preference number: 4 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCMAAAT*TFSMTV
Trigger: GACGGTCATTGAGAAGGTTCAGGTTGCAGCCGCCAT...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CTGCCCTCAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGTGTGGAGAGTGGCATTaGCTGATTGGAAATAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPSASASSGTLPAGALGQCGEWH*LIGNSR
Trigger: TCTGCTATTTCCAATCAGTCAATGCCACTCTCCACA...CTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCTGGAAACAAGGTTCTTaGAGCGAGGGAGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCWKQGS*SEGGSR
Trigger: CCGAGAGCCTCCCTCGCTGCAAGAACCTTGTTTCCA...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTAAGGCTTGTTTGCGGTaGCAGCTGAAGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSKACLR*QLKVGR
Trigger: CCTCCCCACCTTCAGCTGGCACCGCAAACAAGCCTT...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCAGCCCACCCCTGCTaGAGTCGGCAAATCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVPAHPC*SRQIRG
Trigger: GCCACGGATTTGCCGACTGCAGCAGGGGTGGGCTGG...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGCCCCCAGCCCACCCCTaGTGCAGTCGGCAAATCCGT +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKPPAHP*CSRQIR
Trigger: ACGGATTTGCCGACTGCAGCAGGGGTGGGCTGGGGG...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTGGGCTAGGGGCTTGTaGTTTGCCTCCGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GRVPNREGSKQQGILRLGWARGL*FASAAK
Trigger: TTTGGCTGCGGAGGCAAAGCACAAGCCCCTAGCCCA...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAGCCCCTGGAAGCAGATaGGGCAGAGTGGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRAPGSR*GRVGSS
Trigger: TGAGGACCCCACTCTGCCGCATCTGCTTCCAGGGGC...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGACCAGCTCTCGGCTGCTaGCTGGGGGACTTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRPALGC*LGDFAV
Trigger: AACAGCGAAGTCCCCCAGGCAGCAGCCGAGAGCTGG...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCCTCTTCCTCCTCTaGGTCGCGGTCGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVLLFLL*VAVALL
Trigger: GAGGAGGGCGACCGCGACCCAGAGGAGGAAGAGGAG...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATTGATGAGGCAAGGCTaGTGTGTGCACTTGACCGAG +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSLMRQG*CVHLTE
Trigger: CTCGGTCAAGTGCACACACCAGCCTTGCCTCATCAA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATGGCCATGGTGGGGTTaGGTAGTTGGGAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSWPWWG*VVGKVA
Trigger: AGCAACTTTCCCAACTACCCAACCCCACCATGGCCA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCACGAGGGGCTGAAAGTTaGCCAGATGAGCCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSRGAES*PDEPRN
Trigger: ATTTCTTGGCTCATCTGGTCAACTTTCAGCCCCTCG...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTGCACACCACGTCCATaGAGCCATACATCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: GRVPNREGSKQQGILRLGCTPRP*SHTSRS
Trigger: GCTACGGGATGTATGGCTTCATGGACGTGGTGTGCA...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATTTAATACCCATGGATaGCGCGACCACTGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSFNTHG*RDHCAV
Trigger: CACTGCACAGTGGTCGCGTCATCCATGGGTATTAAA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTCACTGTCCAAGCTGCTaGCCAGTGAGTAGCGATCCT +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSHCPSC*PVSSDP
Trigger: AGGATCGCTACTCACTGGGCAGCAGCTTGGACAGTG...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCTGCTGGTTGACAGCCTaGCACCGTTTAAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCCWLTA*HRLKMR
Trigger: CCGCATCTTTAAACGGTGGCAGGCTGTCAACCAGCA...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACAGGTTCAGCCTGTATTaGACTTTGTTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHRFSLY*TLLLSW
Trigger: CCAACTCAACAACAAAGTGCAATACAGGCTGAACCT...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGACCTGCCCTCAGCCTCTaGTTCTTCGGGTACCTTGCC +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRPALSL*FFGYLA
Trigger: GGCAAGGTACCCGAAGAAGCAGAGGCTGAGGGCAGG...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACACAGCAGCAGAACTGTaGTTGAAATATCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHTAAEL*LKYPLE
Trigger: TTCCAGTGGATATTTCAAGCACAGTTCTGCTGCTGT...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCAGAAGGGGCTGGCATTaGACATGTCCTGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEARRGWH*TCPGHG
Trigger: ACCATGGCCAGGACATGTGCAATGCCAGCCCCTTCT...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGAGGCAAGAGTGCTTCTaGAGGGTGGGGGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKRQECF*RVGAEE
Trigger: CTCCTCCGCCCCCACCCTCCAGAAGCACTCTTGCCT...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGGACAGGACAGGTTTTaGGGGTCCACAGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSGQDRF*GSTVDL
Trigger: CAGATCCACTGTGGACCCCCAAAACCTGTCCTGTCC...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCTACTCCACTCCCGAGGAGGGGATATTaGCCTGGGTGGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NREGSKQQGILRLGSTPLPRRGY*PGWMRR
Trigger: CCTCCTCATCCACCCAGGCCAATATCCCCTCCTCGG...GAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCTCTCGGCTGCTGCCTaGGGGACTTCGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: LFSRGVCVCVCVCVCVCPLSAAA*GTSLFM
Trigger: CATGAACAGCGAAGTCCCCCAGGCAGCAGCCGAGAG...AGGACACACACACACACACACACACACACACACACACACACCCCTAGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp TGGTGGGGTTGGGTAGTTGGGAAAGTTGCTCCGGGATaGACAGCTTCCAAAGCTGAAGCCACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: WWGWVVGKVAPG*TASKAEATAAE
Trigger: TTCTGCTGCTGTGGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTTTGTGCTTATGGCGATaGCGTGGTACTTGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: QPLLLRVPCLQVHWGRVFLCLWR*RGTCSS
Trigger: GCTACTACAAGTACCACGTCATCGCCATAAGCACAA...AAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTCTGCCTCCTGCCTTTTaGTCCTCCAGGTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSLPPAF*SSRSFV
Trigger: GACAAAAGACCTGGAGGATCAAAAGGCAGGAGGCAG...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCTACTCCACTCCCTTTTCTGGCTGCCTaGAGAACACAGCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NREGSKQQGILRLGSTPLPFLAA*RTQPQE
Trigger: CTCCTGGGGCTGTGTTCTGCAGGCAGCCAGAAAAGG...GAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGCCAGCTCACCCGTaGCTCCTCCTTTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVLPAHP*LLLFWL
Trigger: CAGCCAGAAAAGGAGGAGGCACGGGTGAGCTGGCAG...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGTGGTGGCGCAACATCTaGGGGGCTGGGGCACACAAT +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKWWRNI*GAGAHN
Trigger: ATTGTGTGCCCCAGCCCCCCAGATGTTGCGCCACCA...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCGTGGGGTTGGGTAGTTaGGAAAGTTGCTCCGGGATT +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAVGLGS*ESCSGI
Trigger: AATCCCGGAGCAACTTTCCCAACTACCCAACCCCAC...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCATGTCCTGGCCATGGTaGGGTTGGGTAGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GWVVGKVAPGLTASKAEAMSWPW*GWVVGK
Trigger: TTTCCCAACTACCCAACCCCACCATGGCCAGGACAT...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCACATGTCCTGGCCATaGTGGGGTTGGGTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LFSRGVCVCVCVCVCVCPHMSWP*WGWVVG
Trigger: CCCAACTACCCAACCCCACCATGGCCAGGACATGTG...AGGACACACACACACACACACACACACACACACACACACACCCCTAGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCTCCTTGGGGCACACTaGTCAAGCTCCTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: LFSRGVCVCVCVCVCVCPLLGAH*SSSSQP
Trigger: TGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAG...AGGACACACACACACACACACACACACACACACACACACACCCCTAGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTAAGGAATACTTAGATTaGGCTCTACTCCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSKEYLD*ALLHSL
Trigger: CAAGGAGTGGAGTAGAGCCCAATCTAAGTATTCCTT...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp CCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTaGGGCCAGGTTCAGCCTGTATTGCACTTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PCLQVHWGRVFL*GQVQPVLHFVV
Trigger: AACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATaGGGCTCTACTCCACTCCTTGGGGCACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: NREGSKQQGILR*GSTPLLGAHWS
Trigger: TGACCAGTGTGCCCCAAGGAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAAAACCTTCAGGTCATTaGAGAGCATGCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRKPSGH*RACGSG
Trigger: GCCGCTGCCGCATGCTCTTCAATGACCTGAAGGTTT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCGAGAGTGGCATTGACTaGTTGGAAATAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPESGID*LEIAEL
Trigger: CAGTTCTGCTATTTCCAATCAGTCAATGCCACTCTC...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTAAGTTGCTCCGGGATTaGCAGCTTCCAAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSKLLRD*QLPKLK
Trigger: CTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTT...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGGCCTCCGGCACTaGCACAGTCACACAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVLGLRH*HSHTGF
Trigger: AAAGCCTGTGTGACTGTGGCAGTGCCGGAGGCCAAG...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp AACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTCTACTCCACTCCAGATTCCAGGCTGCTaGCAGGTGTTGTCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: NREGSKQQGILRLGSTPLQIPGC*QVLSRL
Trigger: AAGACGAGACAACACCTGGCAGCAGCCTGGAATCTG...GAGTGGAGTAGAGCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTAGAGCAGACCACAGATaGTTTTCCTCTTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LFSRGVCVCVCVCVCVCPRADHR*FSSWPP
Trigger: AGGGGGCCAAGAGGAAAAGCATCTGTGGTCTGCTCT...AGGACACACACACACACACACACACACACACACACACACACCCCTAGAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGCCAGGAAAGGATTATTaGGTTCTTCTCAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGPGKDY*VLLKFL
Trigger: TAGGAATTTGAGAAGAACCCAATAATCCTTTCCTGG...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGAGCACTTTCCACTGCTaGTTGACAGCCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKSTFHC*LTACHR
Trigger: ACGGTGGCAGGCTGTCAACCAGCAGTGGAAAGTGCT...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGACACACTCTCCCTCTaGCTGCTCACACCAGCATAT +
Preference number: 4 (lower is better)
Translates to: LFSRGVCVCVCVCVCVCPDTLSL*LLTPAY
Trigger: ATATGCTGGTGTGAGCAGCCAGAGGGAGAGTGTGTC...AGGACACACACACACACACACACACACACACACACACACACCCCTAGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTACTCCACTCCTTaGGGCACACTGGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVLYSTP*GTLVKL
Trigger: GAGCTTGACCAGTGTGCCCCAAGGAGTGGAGTAGAG...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTAAATCTGGAGTGGATTaGGCTGGGCTTAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSKSGVD*AGLREN
Trigger: GTTTTCTCTAAGCCCAGCTCAATCCACTCCAGATTT...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR GCA 90 bp CTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTAATCAGATTCCAGGCTaGTGCCAGGTGTTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LFSRGVCVCVCVCVCVCPNQIPG*CQVLSR
Trigger: ACGAGACAACACCTGGCAGCAGCCTGGAATCTGATT...AGGACACACACACACACACACACACACACACACACACACACCCCTAGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTATTGTAAATCAAATCTaGAGTGGATTGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QPLLLRVPCLQVHWGRVFIVNQI*SGLSWA
Trigger: AGCCCAGCTCAATCCACTCCAGATTTGATTTACAAT...AAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAACCGAGGGTCCTTCATaGATGATGAGACCTATGCAC +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRTEGPS*MMRPMH
Trigger: GTGCATAGGTCTCATCATCCATGAAGGACCCTCGGT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGGCAGGGTTTTTCTGTTaGGCCAGGTTCAGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKAGFFC*ARFSLY
Trigger: ATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGC...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCTTTTCATTGTTGTTGTaGAGAGTGGCATTGACTGAT +
Preference number: 4 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCFSLLL*RVALTD
Trigger: ATCAGTCAATGCCACTCTCCACAACAACAATGAAAA...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCACTTTGTTGTTGAGTTaGTGTTGGTTTTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVATLLLS*CWFSLL
Trigger: CAACAATGAAAACCAACACCAACTCAACAACAAAGT...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAATCGGGAGTTCCATTTaGAAGTTCCTTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRIGSSI*KFLQEG
Trigger: TCCTTCCTGAAGGAACTTCCAAATGGAACTCCCGAT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR TCA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGACAGCAGAACTGTGCTTaGAATATCCACTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: SLGRVPNREGSKQQGILRQQNCA*NIHWKS
Trigger: AGATTTCCAGTGGATATTTCAAGCACAGTTCTGCTG...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGAGTCTGCTTTCTCACTaGCTTTTCTTACAACCCCTC +
Preference number: 4 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKSLLSH*LFLQPL
Trigger: GAGGGGTTGTAAGAAAAGCCAGTGAGAAAGCAGACT...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CCA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAATCAAATCTGGAGTaGATTGAGCTGGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVKSNLE*IELGLE
Trigger: CTCTAAGCCCAGCTCAATCCACTCCAGATTTGATTT...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp TGTTGGGCCAGGTTCAGCCTGTATTGCACTTTGTTGTaGAGTTGGTGTTGGTTTTCATTGTTGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CWARFSLYCTLL*SWCWFSLLLWR
Trigger: TCTCCACAACAACAATGAAAACCAACACCAACTCAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp TTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCACTTaGTTGTTGAGTTGGTGTTGGTTTTCATTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FFCWARFSLYCT*LLSWCWFSLLL
Trigger: CAACAACAATGAAAACCAACACCAACTCAACAACAAAGTGCAATACAGGCTGAACCTGGCCCAACAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
3UTR CAA 72 bp TATTGCACTTTGTTGTTGAGTTGGTGTTGGTTTTCATaGTTGTTGTGGAGAGTGGCATTGACTGATTGGAAA +
Preference number: 4 (lower is better)
Translates to: YCTLLLSWCWFS*LLWRVALTDWK
Trigger: TTTCCAATCAGTCAATGCCACTCTCCACAACAACAATGAAAACCAACACCAACTCAACAACAAAGTGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp GTCCGGGCGGGCGAGTGGCCTCGCCTTCTCCTCCTCTTCCTCCTCTaGGTCGCGGTCGCCCTCCTCCTCCGGCTCCGGGTCGGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: VRAGEWPRLLLLFLL*VAVALLLRLRVGPR
Trigger: GCGCGGGCCGACCCGGAGCCGGAGGAGGAGGGCGACCGCGACCCAGAGGAGGAAGAGGAGGAGAAGGCGAGGCCACTCGCCCGCCCGGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp CGGGCGAGTGGACAGCTCCCACCCAGACCCCGCGCGTCACGCTCGTaGGGGCCTGACGCAGACGCCGCGGAGGGATGGAGGAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: RASGQLPPRPRASRS*GPDADAAEGWRRER
Trigger: CCTTTCCCTCCTCCATCCCTCCGCGGCGTCTGCGTCAGGCCCCCACGAGCGTGACGCGCGGGGTCTGGGTGGGAGCTGTCCACTCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp TCTGGGGGTGCCACTGCACCTCCCCACCCTGCTCCGGGCCCTCAGTaGTGGTCATGGCCTTCCTTCCGGGCCTCTGCTCTCACACTGTCG +
Preference number: 5 (lower is better)
Translates to: SGGATAPPHPAPGPQ*WSWPSFRASALTLS
Trigger: CGACAGTGTGAGAGCAGAGGCCCGGAAGGAAGGCCATGACCACCACTGAGGGCCCGGAGCAGGGTGGGGAGGTGCAGTGGCACCCCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 90 bp TTCCCAAAGGGGTGGTGCTGGAAGGGAGGTGGCGGGGCGGCGAGCTaGCCGTCCGAGAACTGGAAACAAGGTTCTTGCAGCGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FPKGWCWKGGGGAAS*PSENWKQGSCSEGG
Trigger: GCCTCCCTCGCTGCAAGAACCTTGTTTCCAGTTCTCGGACGGTCAGCTCGCCGCCCCGCCACCTCCCTTCCAGCACCACCCCTTTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTAACTGGGCTAGGGGCTaGTGCTTTGCCTCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: AAALLEARRSGVPYREGTNWARG*CFASAA
Trigger: GGCTGCGGAGGCAAAGCACAAGCCCCTAGCCCAGTT...AGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGACTGCAGCTGCTCTCTaGGAAGCCCGTAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: APLGPPGYAGRSREHKALTAAAL*EARRSG
Trigger: CCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGT...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 90 bp GGGCCTGACGCAGACGCCGCGGAGGGATGGAGGAGGGAAAGGGGATaGGAGGAAAAGAAGCTGGAGGGAGAGGGAGCAAGAGGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GPDADAAEGWRRERG*EEKKLEGEGARGGE
Trigger: CTCTCCTCCTCTTGCTCCCTCTCCCTCCAGCTTCTTTTCCTCTCATCCCCTTTCCCTCCTCCATCCCTCCGCGGCGTCTGCGTCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 90 bp TGCTCCGGGCCCTCAGTGGTGGTCATGGCCTTCCTTCCGGGCCTCTaGTCTCACACTGTCGTGACTCTCATGACCAGCTCTCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CSGPSVVVMAFLPGL*SHTVVTLMTSSRLL
Trigger: CAGCAGCCGAGAGCTGGTCATGAGAGTCACGACAGTGTGAGAGCAGAGGCCCGGAAGGAAGGCCATGACCACCACTGAGGGCCCGGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp ACTAGTGGAATAATTCGGTTCTCAGGCAAGAGTGCTTCTGGAGGGTaGGGGCGGAGGAGGGCGGCTGCCGGGTCTGCTCGGCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TSGIIRFSGKSASGG*GRRRAAAGSARQLC
Trigger: GCAGAGCTGCCGAGCAGACCCGGCAGCCGCCCTCCTCCGCCCCCACCCTCCAGAAGCACTCTTGCCTGAGAACCGAATTATTCCACTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCACTGGAAACAAGGTTCTaGCAGCGAGGGAGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPLETRF*QRGRLS
Trigger: CGAGAGCCTCCCTCGCTGCAAGAACCTTGTTTCCAG...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGCTGGAAGAGAAGGTCTaGGCGCTGCCATCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: APLGPPGYAGRSREHKALLEEKV*ALPSCR
Trigger: TCGGCAAGATGGCAGCGCCAAGACCTTCTCTTCCAG...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGTGCCTGCTCCCTCTGTaGGCTCTGGGGGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGCLLPL*ALGVPL
Trigger: CAGTGGCACCCCCAGAGCCAACAGAGGGAGCAGGCA...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 90 bp CAGCACCACCACCACCAGAGCAGCCCACACAGGGGCATCAGCATGTaGCCCGTGGAAGTAGAGAGCCCAAGAGGGGTGGCTGGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: QHHHHQSSPHRGISM*PVEVESPRGVAGVL
Trigger: TAAGACTCCAGCCACCCCTCTTGGGCTCTCTACTTCCACGGGGCACATGCTGATGCCCCTGTGTGGGCTGCTCTGGTGGTGGTGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCATCTCGTCTTCCGCCGTaGCTCAGCACCCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSSRLPP*LSTRRC
Trigger: GCAGCGGCGGGTGCTGAGCAACGGCGGAAGACGAGA...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACCGAGGTAAGGCTTGTTaGCGGTGCCAGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHRGKAC*RCQLKV
Trigger: CACCTTCAGCTGGCACCGCAAACAAGCCTTACCTCG...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAAAACCTTCAGGTCATaGAAGAGCATGCGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPKTFRS*KSMRQR
Trigger: CCGCTGCCGCATGCTCTTCAATGACCTGAAGGTTTT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCGGCTGCTGCCAGGTGTaGTCTCGTCTTCCGCCGTTG +
Preference number: 5 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAGCCQV*SRLPPL
Trigger: CAACGGCGGAAGACGAGACAACACCTGGCAGCAGCC...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CCCCACCATCCCCACAGCCATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCGCACTTGGCTCCAGCTaGGTCCTCGCGACTCCCCAA +
Preference number: 5 (lower is better)
Translates to: PHHPHSHLSANLAHPNEPALGSS*VLATPQ
Trigger: TTGGGGAGTCGCGAGGACCAAGCTGGAGCCAAGTGC...GGGCTCATTTGGATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCCTGTATTGCTTCCTCTTGGCCCCCTaGGCCTCCGGCACTGCCACA +
Preference number: 5 (lower is better)
Translates to: CRCIGAGFFCWARFSLYCFLLAP*ASGTAT
Trigger: TGTGGCAGTGCCGGAGGCCAAGGGGGCCAAGAGGAA...GCAATACAGGCTGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGGGGACAGGACAGGTTTaGGGGGTCCACAGTGGATCT +
Preference number: 5 (lower is better)
Translates to: AGRSREHKALSISLTASLGTGQV*GVHSGS
Trigger: AGATCCACTGTGGACCCCCAAAACCTGTCCTGTCCC...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCCCGTAGGTCAGGGGTGCCCTACCGTGAGGGGACTGGGTCTGTGCATGTGCCAAATCGGGAGTTCCATTaGGAAGTTCCTTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: ARRSGVPYREGTGSVHVPNREFH*EVPSGR
Trigger: CCTTCCTGAAGGAACTTCCAAATGGAACTCCCGATT...TGGCACATGCACAGACCCAGTCCCCTCACGGTAGGGCACCCCTGACCTACGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGGCTGGTGTGTGCACTaGACCGAGCCATCACAGCGG +
Preference number: 5 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSGWCVH*TEPSQR
Trigger: CCGCTGTGATGGCTCGGTCAAGTGCACACACCAGCC...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCACCCTTGGGCCCACCTGGCTACGCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCCTGTATTGCACTTaGTTGTTGAGTTGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: APLGPPGYAGRSREHKALSLYCT*LLSWCW
Trigger: CCAACACCAACTCAACAACAAAGTGCAATACAGGCT...CAGTGCTTTGTGCTCCCTGCTCCTTCCCGCGTAGCCAGGTGGGCCCAAGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 90 bp GGAAGCAGATGCGGCAGAGTGGGGTCCTCATACCACTGTCCAAGCTaGTGCCCAGTGAGTAGCGATCCTCGGTCTTCTCCTTACAGAAGT +
Preference number: 5 (lower is better)
Translates to: GSRCGRVGSSYHCPS*CPVSSDPRSSPYRS
Trigger: ACTTCTGTAAGGAGAAGACCGAGGATCGCTACTCACTGGGCAGCAGCTTGGACAGTGGTATGAGGACCCCACTCTGCCGCATCTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp CTCTCACACTGTCGTGACTCTCATGACCAGCTCTCGGCTGCTGCCTaGGGGACTTCGCTGTTCATGAGGTCTCAAGTGACTCAGGATGTG +
Preference number: 5 (lower is better)
Translates to: LSHCRDSHDQLSAAA*GTSLFMRSQVTQDV
Trigger: CACATCCTGAGTCACTTGAGACCTCATGAACAGCGAAGTCCCCCAGGCAGCAGCCGAGAGCTGGTCATGAGAGTCACGACAGTGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCCTAGGGGCTTGTGCTTaGCCTCCGCAGCCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: GRVPNREGSKQQGILRLGLGACA*PPQPKG
Trigger: ACCCTTTGGCTGCGGAGGCAAAGCACAAGCCCCTAG...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAAGAGCCGGAAGGGTGTaGTTGGCCGCCAAACCGGGG +
Preference number: 5 (lower is better)
Translates to: SLGRVPNREGSKQQGILRRAGRV*LAAKPG
Trigger: CCCCGGTTTGGCGGCCAACAACACCCTTCCGGCTCT...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGTTGGGTAGTTGGGAAAGTTGCTCCGGGATTGACAGCTTCCAAAGCTGAAGCCTCCGAGGAGGGGATATaGGCCTGGGTGGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: GWVVGKVAPGLTASKAEASEEGI*AWVDEE
Trigger: CTCCTCATCCACCCAGGCCAATATCCCCTCCTCGGA...GGCTTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTTCCCAACTACCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 90 bp ATCTCTTATAAAAGCCGAGAGGAAGCAAATCAGATTCCAGGCTGCTaGCAGGTGTTGTCTCGTCTTCCGCCGTTGCTCAGCACCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ISYKSREEANQIPGC*QVLSRLPPLLSTRR
Trigger: GCGGCGGGTGCTGAGCAACGGCGGAAGACGAGACAACACCTGGCAGCAGCCTGGAATCTGATTTGCTTCCTCTCGGCTTTTATAAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 90 bp AGCAGATGCGGCAGAGTGGGGTCCTCATACCACTGTCCAAGCTGCTaGCCAGTGAGTAGCGATCCTCGGTCTTCTCCTTACAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: SRCGRVGSSYHCPSC*PVSSDPRSSPYRSH
Trigger: ATGACTTCTGTAAGGAGAAGACCGAGGATCGCTACTCACTGGGCAGCAGCTTGGACAGTGGTATGAGGACCCCACTCTGCCGCATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp GACTTCGCTGTTCATGAGGTCTCAAGTGACTCAGGATGTGCAGGATaGTATAAGCACAGTGGTGATGGGACAGAGGGCCTGAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: DFAVHEVSSDSGCAG*YKHSGDGTEGLRGG
Trigger: GCCACCCCTCAGGCCCTCTGTCCCATCACCACTGTGCTTATACCATCCTGCACATCCTGAGTCACTTGAGACCTCATGAACAGCGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTTGGCTAGGCTCGCTGTaGCTACCTCTCCTCGCAGAT +
Preference number: 5 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSWLGSL*LPLLAD
Trigger: ATCTGCGAGGAGAGGTAGCAACAGCGAGCCTAGCCA...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CCACTCCTTGGGGCACACTGGTCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTCCAGAAGCACCAGAGTaGCTTTTAAGAGAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: PLLGAHWSSSSQPLQLLSPEAPE*LLREQL
Trigger: CAACTGCTCTCTTAAAAGCAACTCTGGTGCTTCTGG...AGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGACCAGTGTGCCCCAAGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCGTAGGAGCAGAGGGATaGAAGAAGCGTGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GRVPNREGSKQQGILRLGVGAEG*KKRGGG
Trigger: CCCTCCACCACGCTTCTTCAATCCCTCTGCTCCTAC...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCGGGAAGGAGCAGGGAGCACAAAGCACTGAGCATCAGCCTGACTGCCTCTTTGCCCCAACCTCCAACTTaGTTCAGTGTGTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: AGRSREHKALSISLTASLPQPPT*FSVSPF
Trigger: GAAAGGAGACACACTGAACAAAGTTGGAGGTTGGGG...CAAAGAGGCAGTCAGGCTGATGCTCAGTGCTTTGTGCTCCCTGCTCCTTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCACCTGCCTCCTGCCTTTaGATCCTCCAGGTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSPASCL*ILQVFC
Trigger: ACAAAAGACCTGGAGGATCAAAAGGCAGGAGGCAGG...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCATCCCCACAGCCATTaGTCAGCGAATCTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: QPLLLRVPCLQVHWGRVFHPHSH*SANLAH
Trigger: ATGGGCAAGATTCGCTGACAAATGGCTGTGGGGATG...AAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTGTGTCCCTGCCAGCTCACCAAGGAATACTTAGATaGGGCTCTACTCCACTCCTT +
Preference number: 5 (lower is better)
Translates to: AHPNEPRSPKGSVSLPAHQGILR*GSTPLL
Trigger: AAGGAGTGGAGTAGAGCCCAATCTAAGTATTCCTTG...GTGAGCTGGCAGGGACACACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CATTTGTCAGCGAATCTTGCCCATCCAAATGAGCCCAGGAGCCCCAAAGGCAGTAGCCTGACTGCCTCTTaGGGGAGGGTTCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: HLSANLAHPNEPRSPKGSSLTAS*GRVPNR
Trigger: CCTGTTTGGAACCCTCCCCAAAGAGGCAGTCAGGCT...ACTGCCTTTGGGGCTCCTGGGCTCATTTGGATGGGCAAGATTCGCTGACAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 90 bp AGCAGTGTGGCCGAGGTGGGAGGCAGCCGGCACTTGGCTCCAGCTTaGTCCTCGCGACTCCCCAAAACCGTATATAAATATATCTCTTAT +
Preference number: 5 (lower is better)
Translates to: SSVAEVGGSRHLAPA*SSRLPKTVYKYISY
Trigger: ATAAGAGATATATTTATATACGGTTTTGGGGAGTCGCGAGGACCAAGCTGGAGCCAAGTGCCGGCTGCCTCCCACCTCGGCCACACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCAAGCTCCTCCCAACCACTGCAGCTGCTCTCTTGGAAGCCCGTAGGTCAGGGGCAGGTTCAGCCTGTATaGCACTTTGTTGTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SSSSQPLQLLSWKPVGQGQVQPV*HFVVEL
Trigger: CAACTCAACAACAAAGTGCAATACAGGCTGAACCTG...CCCCTGACCTACGGGCTTCCAAGAGAGCAGCTGCAGTGGTTGGGAGGAGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCTTTGGGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGAGCTTCTTCGGGTACCTaGCCTGCAGGTGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: SLGRVPNREGSKQQGILRASSGT*PAGALG
Trigger: CCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGC...TCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCTGTACTTTTCTCTAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGATGCTTTTCCTCTaGGCCCCCTTGGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SVLFSRGVCVCVCVCVCVQMLFL*APLASG
Trigger: GCCGGAGGCCAAGGGGGCCAAGAGGAAAAGCATCTG...CACACACACACACACACACACACACACACACACACCCCTAGAGAAAAGTACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCTTGCCTGCAGGTGCATaGGGGCAGGGTTTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: GRVPNREGSKQQGILRLGLPAGA*GQGFSV
Trigger: AACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAA...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCATTTGTCAGCGAATCTaGCCCATCCAAATGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAICQRI*PIQMSP
Trigger: TGGGCTCATTTGGATGGGCAAGATTCGCTGACAAAT...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 90 bp TATATCTCTTATAAAAGCCGAGAGGAAGCAAATCAGATTCCAGGCTaGTGCCAGGTGTTGTCTCGTCTTCCGCCGTTGCTCAGCACCCGC +
Preference number: 5 (lower is better)
Translates to: YISYKSREEANQIPG*CQVLSRLPPLLSTR
Trigger: GCGGGTGCTGAGCAACGGCGGAAGACGAGACAACACCTGGCAGCAGCCTGGAATCTGATTTGCTTCCTCTCGGCTTTTATAAGAGATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CAGCCTCTGCTTCTTCGGGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTTGGTGTTGGTTTTCATaGTTGTTGTGGAGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: QPLLLRVPCLQVHWGRVFWCWFS*LLWRVA
Trigger: TGCCACTCTCCACAACAACAATGAAAACCAACACCA...AAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACCCGAAGAAGCAGAGGCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCAGCAGCAGAACTGTGCTaGAAATATCCACTGGAAATC +
Preference number: 5 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSAAELC*KYPLEI
Trigger: GATTTCCAGTGGATATTTCAAGCACAGTTCTGCTGC...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGTACCTTGCCTGCAGGTGCATTGGGGCAGGGTTTTTCTGTTGGGCCAGGTTCACCCAGGAAAGGATTATaGGGTTCTTCTCAAATTCCT +
Preference number: 5 (lower is better)
Translates to: GTLPAGALGQGFSVGPGSPRKGL*GSSQIP
Trigger: AGGAATTTGAGAAGAACCCAATAATCCTTTCCTGGG...TGAACCTGGCCCAACAGAAAAACCCTGCCCCAATGCACCTGCAGGCAAGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp GGGAGGGTTCCAAACAGGGAGGGTTCCAAGCAGCAAGGAATACTTAGATTGGGCAAAGTTGCTCCGGGATaGACAGCTTCCAAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: GRVPNREGSKQQGILRLGKVAPG*TASKAE
Trigger: TTCAGCTTTGGAAGCTGTCAATCCCGGAGCAACTTT...GCCCAATCTAAGTATTCCTTGCTGCTTGGAACCCTCCCTGTTTGGAACCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp CGCGACCACTGTGCAGTGACAACCAGAAACTTTGCAGGTGAACACCCAGTGGCCTATTGCACTTTGTTGTaGAGTTGGTGTTGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RDHCAVTTRNFAGEHPVAYCTLL*SWCWFS
Trigger: TGAAAACCAACACCAACTCAACAACAAAGTGCAATA...GGCCACTGGGTGTTCACCTGCAAAGTTTCTGGTTGTCACTGCACAGTGGTCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGGTTGTTGAGTTGGTGTaGGTTTTCATTGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKVVELV*VFIVVV
Trigger: CACAACAACAATGAAAACCAACACCAACTCAACAAC...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGCTGTATTGCACTTTGTaGTTGAGTTGGTGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKLYCTL*LSWCWF
Trigger: AAACCAACACCAACTCAACAACAAAGTGCAATACAG...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS-3UTR CAA 90 bp TCCAAACCTAAGCCCTCTTTTAGCCCACCTGAAATCGGGAGTTCCATTTGGAAGAGAGCCTCTGTCGAATaGTTTAAATCAATGTCGAAT +
Preference number: 5 (lower is better)
Translates to: SKPKPSFSPPEIGSSIWKRASVE*FKSMSN
Trigger: ATTCGACATTGATTTAAACAATTCGACAGAGGCTCT...CTTCCAAATGGAACTCCCGATTTCAGGTGGGCTAAAAGAGGGCTTAGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 72 bp CGGAGGAGGGCGGCTGCCGGGTCTGCTCGGCAGCTCTaGCCCCGCTACCCCCACCAAGGGCGGCCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: RRRAAAGSARQL*PRYPHQGRPRP
Trigger: GGGCCGAGGCCGCCCTTGGTGGGGGTAGCGGGGGCAGAGCTGCCGAGCAGACCCGGCAGCCGCCCTCCTCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 72 bp GGACAGCTCCCACCCAGACCCCGCGCGTCACGCTCGTaGGGGCCTGACGCAGACGCCGCGGAGGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: GQLPPRPRASRS*GPDADAAEGWR
Trigger: CCTCCATCCCTCCGCGGCGTCTGCGTCAGGCCCCCACGAGCGTGACGCGCGGGGTCTGGGTGGGAGCTGTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 72 bp CCCACCCAGACCCCGCGCGTCACGCTCGTGGGGGCCTaGCGCAGACGCCGCGGAGGGATGGAGGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: PTQTPRVTLVGA*RRRRGGMEEGK
Trigger: CTTTCCCTCCTCCATCCCTCCGCGGCGTCTGCGTCAGGCCCCCACGAGCGTGACGCGCGGGGTCTGGGTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CAA 90 bp TGGCGGGGCGGCGAGCTGACCGTCCGAGAACTGGAAACAAGGTTCTaGCAGCGAGGGAGGCTCTCGGCTATCTCCGCCGCCGGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: WRGGELTVRELETRF*QRGRLSAISAAGAA
Trigger: CGCGGCGCCGGCGGCGGAGATAGCCGAGAGCCTCCCTCGCTGCAAGAACCTTGTTTCCAGTTCTCGGACGGTCAGCTCGCCGCCCCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 72 bp CTTCCGCCGTTGCTCAGCACCCGCCGCTGCCCCCACTaGCTCGATTCCCAAAGGGGTGGTGCTGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: LPPLLSTRRCPH*LDSQRGGAGRE
Trigger: CTCCCTTCCAGCACCACCCCTTTGGGAATCGAGCCAGTGGGGGCAGCGGCGGGTGCTGAGCAACGGCGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 72 bp CAGGCTGCTGCCAGGTGTTGTCTCGTCTTCCGCCGTTaGTCAGCACCCGCCGCTGCCCCCACTGGCTCGATT +
Preference number: 6 (lower is better)
Translates to: QAAARCCLVFRR*SAPAAAPTGSI
Trigger: AATCGAGCCAGTGGGGGCAGCGGCGGGTGCTGAGCAACGGCGGAAGACGAGACAACACCTGGCAGCAGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 72 bp GAAGCAGTGTGGCCGAGGTGGGAGGCAGCCGGCACTTaGCTCCAGCTTGGTCCTCGCGACTCCCCAAAACCG +
Preference number: 6 (lower is better)
Translates to: EAVWPRWEAAGT*LQLGPRDSPKP
Trigger: CGGTTTTGGGGAGTCGCGAGGACCAAGCTGGAGCCAAGTGCCGGCTGCCTCCCACCTCGGCCACACTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 72 bp GGGTGGTGCTGGAAGGGAGGTGGCGGGGCGGCGAGCTaGCCGTCCGAGAACTGGAAACAAGGTTCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: GWCWKGGGGAAS*PSENWKQGSCS
Trigger: GCTGCAAGAACCTTGTTTCCAGTTCTCGGACGGTCAGCTCGCCGCCCCGCCACCTCCCTTCCAGCACCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 72 bp TTGTCTCGTCTTCCGCCGTTGCTCAGCACCCGCCGCTaGCCCCACTGGCTCGATTCCCAAAGGGGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: LSRLPPLLSTRR*PHWLDSQRGGA
Trigger: AGCACCACCCCTTTGGGAATCGAGCCAGTGGGGGCAGCGGCGGGTGCTGAGCAACGGCGGAAGACGAGACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 72 bp CTCCTCTTCCGAGGAGGGGATATTGGCCTGGGTGGATaGGGAGGTCCGGGGGTTGGTCCTGCCTCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: LLFRGGDIGLGG*GGPGVGPASCL
Trigger: AAGGCAGGAGGCAGGACCAACCCCCGGACCTCCTCATCCACCCAGGCCAATATCCCCTCCTCGGAAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 72 bp CACCACCAGAGCAGCCCACACAGGGGCATCAGCATGTaGCCCGTGGAAGTAGAGAGCCCAAGAGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: HHQSSPHRGISM*PVEVESPRGVA
Trigger: AGCCACCCCTCTTGGGCTCTCTACTTCCACGGGGCACATGCTGATGCCCCTGTGTGGGCTGCTCTGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 72 bp GGCACTGCTGAGCAGCGAGGCAGGTGGCTCTGTGGCTaGGCCACCCCAGTCATCTTCCACAGAAGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: GTAEQRGRWLCG*ATPVIFHRRRW
Trigger: CCACCTTCTTCTGTGGAAGATGACTGGGGTGGCCCAGCCACAGAGCCACCTGCCTCGCTGCTCAGCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CAA 72 bp GGCGAGCTGACCGTCCGAGAACTGGAAACAAGGTTCTaGCAGCGAGGGAGGCTCTCGGCTATCTCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: GELTVRELETRF*QRGRLSAISAA
Trigger: GGCGGCGGAGATAGCCGAGAGCCTCCCTCGCTGCAAGAACCTTGTTTCCAGTTCTCGGACGGTCAGCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 72 bp GCAGACGCCGCGGAGGGATGGAGGAGGGAAAGGGGATaGGAGGAAAAGAAGCTGGAGGGAGAGGGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: ADAAEGWRRERG*EEKKLEGEGAR
Trigger: TCTTGCTCCCTCTCCCTCCAGCTTCTTTTCCTCTCATCCCCTTTCCCTCCTCCATCCCTCCGCGGCGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CAA 72 bp GGTGTTGCAGGTGAAACTGGGCTAGGGGCTTGTGCTTaGCCTCCGCAGCCAAAGGGTTACACCGAAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GVAGETGLGACA*PPQPKGYTEEG
Trigger: CCCCTCTTCGGTGTAACCCTTTGGCTGCGGAGGCAAAGCACAAGCCCCTAGCCCAGTTTCACCTGCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CAA 72 bp CTGATCCACTTGATGAGGCAAGGCTGGTGTGTGCACTaGACCGAGCCATCACAGCGGCATGGGCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LIHLMRQGWCVH*TEPSQRHGLSS
Trigger: GCTGCTGAGCCCATGCCGCTGTGATGGCTCGGTCAAGTGCACACACCAGCCTTGCCTCATCAAGTGGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 72 bp GTAGCGATCCTCGGTCTTCTCCTTACAGAAGTCATCTaGGGAGGCACTGCTGAGCAGCGAGGCAGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: VAILGLLLTEVI*GGTAEQRGRWL
Trigger: GAGCCACCTGCCTCGCTGCTCAGCAGTGCCTCCTCAGATGACTTCTGTAAGGAGAAGACCGAGGATCGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 72 bp GGCAGAGTGGGGTCCTCATACCACTGTCCAAGCTGCTaGCCAGTGAGTAGCGATCCTCGGTCTTCTCCTTAC +
Preference number: 6 (lower is better)
Translates to: GRVGSSYHCPSC*PVSSDPRSSPY
Trigger: GTAAGGAGAAGACCGAGGATCGCTACTCACTGGGCAGCAGCTTGGACAGTGGTATGAGGACCCCACTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 72 bp GCCGAGGTGGGAGGCAGCCGGCACTTGGCTCCAGCTTaGTCCTCGCGACTCCCCAAAACCGTATATAAATAT +
Preference number: 6 (lower is better)
Translates to: AEVGGSRHLAPA*SSRLPKTVYKY
Trigger: ATATTTATATACGGTTTTGGGGAGTCGCGAGGACCAAGCTGGAGCCAAGTGCCGGCTGCCTCCCACCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CCA 72 bp TGTCGTGACTCTCATGACCAGCTCTCGGCTGCTGCCTaGGGGACTTCGCTGTTCATGAGGTCTCAAGTGACT +
Preference number: 6 (lower is better)
Translates to: CRDSHDQLSAAA*GTSLFMRSQVT
Trigger: AGTCACTTGAGACCTCATGAACAGCGAAGTCCCCCAGGCAGCAGCCGAGAGCTGGTCATGAGAGTCACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CAA 72 bp GCTTTTGACCTGAGGACACTGGTAGGAGCAGAGGGATaGAAGAAGCGTGGTGGAGGGGCCACTAGAGCCTCT +
Preference number: 6 (lower is better)
Translates to: AFDLRTLVGAEG*KKRGGGATRAS
Trigger: AGAGGCTCTAGTGGCCCCTCCACCACGCTTCTTCAATCCCTCTGCTCCTACCAGTGTCCTCAGGTCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS TCA 72 bp TGGGGTCCTCATACCACTGTCCAAGCTGCTGCCCAGTaGGTAGCGATCCTCGGTCTTCTCCTTACAGAAGTC +
Preference number: 6 (lower is better)
Translates to: WGPHTTVQAAAQ*VAILGLLLTEV
Trigger: GACTTCTGTAAGGAGAAGACCGAGGATCGCTACTCACTGGGCAGCAGCTTGGACAGTGGTATGAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS CAA 90 bp CTCCTTTCTGCTTTTGACCTGAGGACACTGGTAGGAGCAGAGGGATaGAAGAAGCGTGGTGGAGGGGCCACTAGAGCCTCTGTCGAATTG +
Preference number: 6 (lower is better)
Translates to: LLSAFDLRTLVGAEG*KKRGGGATRASVEL
Trigger: CAATTCGACAGAGGCTCTAGTGGCCCCTCCACCACGCTTCTTCAATCCCTCTGCTCCTACCAGTGTCCTCAGGTCAAAAGCAGAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273067.5
CDS GCA 72 bp AAAGGATGGGAGAAAAAGAAAAGATCGTTTAACCCTTaGAGAGGCGCCTCCTTCCTGAGCATGAAGATCCTG +
Preference number: 6 (lower is better)
Translates to: KGWEKKKRSFNP*RGASFLSMKIL
Trigger: CAGGATCTTCATGCTCAGGAAGGAGGCGCCTCTGCAAGGGTTAAACGATCTTTTCTTTTTCTCCCATCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273067.5