RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARCHF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000099785

Ensembl transcript IDs: ENST00000215555.7, ENST00000381035.8, ENST00000594796.1, ENST00000595142.5, ENST00000595213.1, ENST00000601283.5, ENST00000601724.5, ENST00000602117.1

Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTCTGGCC +
Preference number: 1 (lower is better)
Translates to: KRSGRAGTVEVEVLK*KSFHRTGYHQLPLA
Trigger: GGCCAGAGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR TCA 90 bp CTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTC +
Preference number: 1 (lower is better)
Translates to: LRSVQAVRELLKWKC*SGSPSTGQGITSYL
Trigger: GAGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR GCA 90 bp CAGTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTaGCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGC +
Preference number: 1 (lower is better)
Translates to: QCNFYIKSRVPGKWA*RVQRSARSLLECSS
Trigger: GCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR CCA 90 bp GAAACGCAGTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTaGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGT +
Preference number: 1 (lower is better)
Translates to: ETQCNFYIKSRVPGK*ACRVQRSARSLLEC
Trigger: ACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCACTGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR GCA 90 bp CTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LAQKVPCGPQNEIRVPAPLWPLC*RVRRAQ
Trigger: CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAG...CGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR GCA 90 bp ATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: MVSLGLRSVQAVRELLKWLWPLC*RVRRAQ
Trigger: CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAG...CCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR-3UTR GCA 90 bp AGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTACACCGGCCACAGCTaGTGGCCCAGAAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: SGPAGCREAQEACWNVPAYTGHS*WPRRCH
Trigger: ATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGTGTA...AGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR GCA 90 bp TGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: CREAQEACWNVPALRAPLLWPLC*RVRRAQ
Trigger: CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAG...CAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR GCA 90 bp AAAGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGTACACCGGCCACAGCTaGTGGCCCAGAAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: KVGLPGAEKRKKLAGMFQYTGHS*WPRRCH
Trigger: ATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGTGTA...CTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR TCA 90 bp AAAGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGATGTGGACCTCAGAATaGGATCAGGGTGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: KVGLPGAEKRKKLAGMFQMWTSE*DQGACS
Trigger: GGAGCAGGCACCCTGATCTCATTCTGAGGTCCACAT...CTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 2 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR GCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLLWPLC*RVRRAQ
Trigger: CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAG...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR-3UTR GCA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAAGAATGAGATCAGGGTaGCTGCTCCGTCCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: VQLLYKVEGARKVGLPGARMRSG*LLRPEL
Trigger: GAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCT...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR CAA 90 bp CCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCT +
Preference number: 2 (lower is better)
Translates to: PKKRSGRAGTVEVEV*KWKSFHRTGYHQLP
Trigger: AGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR-3UTR TCA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACTTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 2 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR TCA 90 bp CAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGATTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 2 (lower is better)
Translates to: QKVPCGPQNEIRVPAPSRLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...TCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR TCA 90 bp AACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGAGACCGTGCGGGAACTGTTaGAGTGGAAGTGTTGAAGTG +
Preference number: 2 (lower is better)
Translates to: NFYIKSRVPGKWACRVQRPCGNC*SGSVEV
Trigger: CACTTCAACACTTCCACTTCAACAGTTCCCGCACGG...TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CCA 90 bp CTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 2 (lower is better)
Translates to: LHGVSWPKKRSGRAGTVEVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...TTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR-3UTR TCA 90 bp TCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGTTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 2 (lower is better)
Translates to: SQTRLCMVSLGLRSVQAVLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...CACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR-3UTR GCA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTTACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCYLWPL*CRVRRA
Trigger: GGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTA...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CCA 90 bp AACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGAGAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 2 (lower is better)
Translates to: NFYIKSRVPGKWACRVQRVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CCA 90 bp AGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 2 (lower is better)
Translates to: RSARSLLECSSFKGALDTVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...TGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR TCA 90 bp AGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACATTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 2 (lower is better)
Translates to: RSARSLLECSSFKGALDTLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...TGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR TCA 72 bp GCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATaGGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGA +
Preference number: 3 (lower is better)
Translates to: AAGPEGAMWTSE*DQGACSVQSSG
Trigger: TCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR CCA 72 bp GGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTaGAATGTTCCAGCTTTAAGGGCGCCCTTGATACAC +
Preference number: 3 (lower is better)
Translates to: GPAGCREAQEAC*NVPALRAPLIH
Trigger: GTGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR GCA 72 bp AGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTaGTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATA +
Preference number: 3 (lower is better)
Translates to: SGPAGCREAQEA*WNVPALRAPLI
Trigger: TATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CAA 90 bp AGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: SGPAGCREAQEACWNVPAVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...AGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR TCA 72 bp GTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACAGGACAGGGTATCACC +
Preference number: 3 (lower is better)
Translates to: VQAVRELLKWKC*SGSPSTGQGIT
Trigger: GGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAACAGTTCCCGCACGGCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR CCA 72 bp GGCCGTGCGGGAACTGTTGAAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACAGGGTATCACCAGCTA +
Preference number: 3 (lower is better)
Translates to: GRAGTVEVEVLK*KSFHRTGYHQL
Trigger: TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAACAGTTCCCGCACGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR-3UTR CAA 90 bp ACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAAGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: TRLCMVSLGLRSVQAVREVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...TTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
3UTR GCA 72 bp TTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTaGCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: FYIKSRVPGKWA*RVQRSARSLLE
Trigger: TTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR CCA 72 bp TGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTaGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: CNFYIKSRVPGK*ACRVQRSARSL
Trigger: CAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CAA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: VQLLYKVEGARKVGLPGAVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CAA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAAGAAGCGCAAGAAGCTaGCTGGAATGTTCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: VQLLYKVEGARKVGLPGARSARS*LECSSF
Trigger: AAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR-3UTR CAA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCATGGTTCCAGGAGCCTaGTCCGCGGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RTGYHQLPLASLLQGPESMVPGA*SAAGPG
Trigger: GCCCGGCCCGGCCGCGGATCAGGCTCCTGGAACCAT...GCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000381035.8
CDS-3UTR CCA 90 bp CTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGCTGTGGAGCCGGAGGTaGTCCTGGGCCCCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LAQKVPCGPQNEIRVPAPLWSRR*SWAPRR
Trigger: CCTGCGCGGGGCCCAGGACCACCTCCGGCTCCACAG...CGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR GCA 90 bp AGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCCACCCAGCGTGCCGGTaGAGCCACACGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RTGYHQLPLASLLQGPESHPACR*SHTGTA
Trigger: TGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTG...GCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCGCTGCCAGTGGAGAATaGTGGGGGCCCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RTGYHQLPLASLLQGPESAASGE*WGPSGL
Trigger: CAGCCCCGAGGGCCCCCAGCATTCTCCACTGGCAGC...GCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCGCCAGTGGAGAATGCTaGGGGCCCTCGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RTGYHQLPLASLLQGPESASGEC*GPSGLS
Trigger: GGACAGCCCCGAGGGCCCCCAGCATTCTCCACTGGC...GCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCCCAGACCTGTGCCACATACTaGGGCGGTCCGAGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: QGITSYLWPLCCRVRRAQTCATY*GGPRPV
Trigger: TACGGGCCTCGGACCGCCCCAGTATGTGGCACAGGT...CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCCCAGCAACCGGCCACAGCTGCTaGCCCAGAAGGTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: GYHQLPLASLLQGPESPATGHSC*PRRCHV
Trigger: CACATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGT...TGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp TGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCACCCAGCGTGCCGGTaGAGCCACACGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: CWPRRCHVDLRMRSGCLLHPACR*SHTGTA
Trigger: TGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTG...GAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGAGCCGGAGGTGGTCCTaGGCCCCGCGCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: AGCREAQEACWNVPALRASRRWS*APRRHN
Trigger: GTTGTGCCTGCGCGGGGCCCAGGACCACCTCCGGCT...CGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR TCA 90 bp CAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGTGTCCAAGGCACGGATaGCGGTGGAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QTRLCMVSLGLRSVQAVRCPRHG*RWRGAG
Trigger: GCCGGCTCCTCTCCACCGTCATCCGTGCCTTGGACA...CCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp GCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCACCCAGCGTGCCGGTaGAGCCACACGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: AGCREAQEACWNVPALRAHPACR*SHTGTA
Trigger: TGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTG...CGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCACTGTGGAGCCGGAGGTaGTCCTGGGCCCCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VQLLYKVEGARKVGLPGALWSRR*SWAPRR
Trigger: CCTGCGCGGGGCCCAGGACCACCTCCGGCTCCACAG...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR CCA 90 bp TTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACACCGGCCACAGCTGCTCCCACGGCCTCCAGCTaGCTGTGGAGCCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLECSSFKGALDTPATAAPTASS*LWSRRW
Trigger: CCACCTCCGGCTCCACAGCCAGCTGGAGGCCGTGGG...AGCAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR TCA 90 bp CTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGCCTTCAGCCACTCTGTaGGGGGTCGAGGCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAQKVPCGPQNEIRVPAPPSATL*GVEAVS
Trigger: AGAAACGGCCTCGACCCCTCACAGAGTGGCTGAAGG...CGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR GCA 90 bp GCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGCREAQEACWNVPALRALWPLC*RVRRAQ
Trigger: CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAG...CGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp CTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGAGTGGGCCTGCCGGGTaGAGAGAAGCGCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LAQKVPCGPQNEIRVPAPSGPAG*REAQEA
Trigger: AGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT...CGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp GGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGTCCTCCATATGCAAGTGGGCCTGCCGGGTaGAGAGAAGCGCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GCLLRPELRTMSTCPPYASGPAG*REAQEA
Trigger: AGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT...TGCATATGGAGGACAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp CAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGCCAGGAAAGTGGGCCTaGCGGGTGCAGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: QNEIRVPAPSRAQDHVHLPGKWA*RVQRSA
Trigger: TGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGG...CAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTAGTCACCCGTCGTCATaGCCACCGGGAGCCCCGTAT +
Preference number: 4 (lower is better)
Translates to: SGPAGCREAQEACWNVPASHPSS*PPGAPY
Trigger: ATACGGGGCTCCCGGTGGCCATGACGACGGGTGACT...AGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGAGGGAGCCGGGGAGGTaGCAGCAGTCACCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: SQTRLCMVSLGLRSVQAVREPGR*QQSPVV
Trigger: GACGACGGGTGACTGCTGCCACCTCCCCGGCTCCCT...CACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CCA 90 bp TGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGAGCCGGAGGTGGTCCTaGGCCCCGCGCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: CREAQEACWNVPALRAPLSRRWS*APRRHN
Trigger: GTTGTGCCTGCGCGGGGCCCAGGACCACCTCCGGCT...CAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR CCA 90 bp CTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGCCAGTGGAGAATGCTaGGGGCCCTCGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LHGVSWPKKRSGRAGTVEASGEC*GPSGLS
Trigger: GGACAGCCCCGAGGGCCCCCAGCATTCTCCACTGGC...TTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTAATGGTTCCAGGAGCCTaGTCCGCGGCCGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLMVPGA*SAAGPG
Trigger: GCCCGGCCCGGCCGCGGATCAGGCTCCTGGAACCAT...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000381035.8
CDS-3UTR TCA 90 bp GCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCGTATCCTCAGGGCCTaGGGCCCATGGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGCREAQEACWNVPALRARILRA*GPWFQE
Trigger: CTCCTGGAACCATGGGCCTCAGGCCCTGAGGATACG...CGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp CATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGTGTCCAAGGCACGGATaGCGGTGGAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: HGVSWPKKRSGRAGTVEVCPRHG*RWRGAG
Trigger: GCCGGCTCCTCTCCACCGTCATCCGTGCCTTGGACA...CACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp TCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTGCTGCCAGTGGAGAATaGTGGGGGCCCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLGLRSVQAVRELLKWKCAASGE*WGPSGL
Trigger: CAGCCCCGAGGGCCCCCAGCATTCTCCACTGGCAGC...ACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp CAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGATACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QKVPCGPQNEIRVPAPSRYLWPL*CRVRRA
Trigger: GGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTA...TCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp ACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAATACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TRLCMVSLGLRSVQAVREYLWPL*CRVRRA
Trigger: GGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTA...TTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACTACACCGGCCACAGCTaGTGGCCCAGAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHYTGHS*WPRRCH
Trigger: ATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGTGTA...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp ACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACCAGGAAAGTGGGCCTaGCGGGTGCAGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: TRLCMVSLGLRSVQAVREPGKWA*RVQRSA
Trigger: TGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGG...TTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAAGTCACCCGTCGTCATaGCCACCGGGAGCCCCGTAT +
Preference number: 4 (lower is better)
Translates to: QKVPCGPQNEIRVPAPSRSHPSS*PPGAPY
Trigger: ATACGGGGCTCCCGGTGGCCATGACGACGGGTGACT...TCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGGCCAGTGGAGAATGCTaGGGGCCCTCGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CREAQEACWNVPALRAPLASGEC*GPSGLS
Trigger: GGACAGCCCCGAGGGCCCCCAGCATTCTCCACTGGC...CAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AAAGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGACCGGCCACAGCTGCTaGCCCAGAAGGTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: KVGLPGAEKRKKLAGMFQTGHSC*PRRCHV
Trigger: CACATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGT...CTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp CTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAACGTATCCTCAGGGCCTaGGGCCCATGGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LHGVSWPKKRSGRAGTVERILRA*GPWFQE
Trigger: CTCCTGGAACCATGGGCCTCAGGCCCTGAGGATACG...TTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACGAGCCGGCCATCCCTTaGAGTCACCTGTGCCACATA +
Preference number: 4 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHEPAIP*SHLCHI
Trigger: TATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTC...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTGGAGCCTCAACCTCTTaGGCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SGPAGCREAQEACWNVPAGASTS*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAAGAGGTTGAGGCTCC...AGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602117.1
CDS-3UTR GCA 90 bp GTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTGCTGCCAGTGGAGAATaGTGGGGGCCCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VEVLKWKSFHRTGYHQLPAASGE*WGPSGL
Trigger: CAGCCCCGAGGGCCCCCAGCATTCTCCACTGGCAGC...AGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp TCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLGLRSVQAVRELLKWKCLWPLC*RVRRAQ
Trigger: CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAG...ACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp ACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAAAGTGGGCCTGCCGGGTaGAGAGAAGCGCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TRLCMVSLGLRSVQAVRESGPAG*REAQEA
Trigger: AGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT...TTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGAGTCACCCGTCGTCATaGCCACCGGGAGCCCCGTAT +
Preference number: 4 (lower is better)
Translates to: SQTRLCMVSLGLRSVQAVSHPSS*PPGAPY
Trigger: ATACGGGGCTCCCGGTGGCCATGACGACGGGTGACT...CACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CCA 90 bp TGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCCGTTCGCTCCCTCATaGCAGATCCGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CWPRRCHVDLRMRSGCLLPFAPS*QIRQKG
Trigger: TCCTTTCTGCCGGATCTGCCATGAGGGAGCGAACGG...GAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGCCGTTCGCTCCCTCATaGCAGATCCGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QNEIRVPAPSRAQDHVHLPFAPS*QIRQKG
Trigger: TCCTTTCTGCCGGATCTGCCATGAGGGAGCGAACGG...CAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp GCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAGCCGGCCATCCCTTaGAGTCACCTGTGCCACATA +
Preference number: 4 (lower is better)
Translates to: ALHGVSWPKKRSGRAGTVEPAIP*SHLCHI
Trigger: TATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTC...AACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGAGACAGGCACAACCAGCCTaGGATGGCGGCCAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: NFYIKSRVPGKWACRVQRQAQPA*DGGQRC
Trigger: ACACCGCTGGCCGCCATCTCAGGCTGGTTGTGCCTG...TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR TCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGGCTGTAGTGAGCTATaGTCACACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGGCSEL*SHHCTP
Trigger: TGGAGTGCAGTGGTGTGATCATAGCTCACTACAGCC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602117.1
CDS-3UTR TCA 90 bp GCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGAGCCAGGCATGGTGCTaGAAGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGCREAQEACWNVPALRASQAWC*KPVVPA
Trigger: AGCTGGGACTACAGGCTTTCAGCACCATGCCTGGCT...CGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602117.1
CDS-3UTR GCA 90 bp TCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGTCCAGACAGCTCTTATaGACGGCACCCAGCGTGCCG +
Preference number: 4 (lower is better)
Translates to: SQTRLCMVSLGLRSVQAVSRQLL*TAPSVP
Trigger: CGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGGA...CACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACAGGCCGTTTCTCCACTaGAAACTCCGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHRPFLH*KLRVAQ
Trigger: CTGTGCCACACGGAGTTTGCAGTGGAGAAACGGCCT...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp TCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTCCAGGAAAGTGGGCCTaGCGGGTGCAGAGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: SLGLRSVQAVRELLKWKCPGKWA*RVQRSA
Trigger: TGCGCTTCTCTGCACCCGGCAGGCCCACTTTCCTGG...ACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGACCTGTGCCACATACTaGGGCGGTCCGAGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: CREAQEACWNVPALRAPLTCATY*GGPRPV
Trigger: TACGGGCCTCGGACCGCCCCAGTATGTGGCACAGGT...CAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGCCCAGCATTCATACTaGTGTCTCCTCTGCCACCTT +
Preference number: 4 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGAQHSY*CLLCHL
Trigger: AAGGTGGCAGAGGAGACACCAGTATGAATGCTGGGC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAAGGGTGCCAGGAAAGTaGGCCTGCCGGGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VQLLYKVEGARKVGLPGARVPGK*ACRVQR
Trigger: TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCT...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGTAGCTGGTGTTAGATaGGGAAAGCCACTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGVAGVR*GKPLLQ
Trigger: CTGGAGAAGTGGCTTTCCTCATCTAACACCAGCTAC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp GGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGTCCTCCATATGCAGTAGCTGGTGTTAGATaGGGAAAGCCACTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GCLLRPELRTMSTCPPYAVAGVR*GKPLLQ
Trigger: CTGGAGAAGTGGCTTTCCTCATCTAACACCAGCTAC...TGCATATGGAGGACAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCACCTTCAGCCACTCTGTaGGGGGTCGAGGCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: VQLLYKVEGARKVGLPGAPSATL*GVEAVS
Trigger: AGAAACGGCCTCGACCCCTCACAGAGTGGCTGAAGG...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR TCA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACAGGCACAACCAGCCTaGGATGGCGGCCAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLQAQPA*DGGQRC
Trigger: ACACCGCTGGCCGCCATCTCAGGCTGGTTGTGCCTG...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR TCA 90 bp GTGCAACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGGAAGGAGACCTCTGTaGGGGGTCGAGGCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: VQLLYKVEGARKVGLPGAGRRPL*GVEAVS
Trigger: AGAAACGGCCTCGACCCCTCACAGAGGTCTCCTTCC...TGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381035.8
CDS-3UTR GCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTCACAGACTAGGCTCTaGATGGTGTCTCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGSQTRL*MVSLGL
Trigger: TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTACCCACGGCCTCCAGCTaGCTGTGGAGCCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KYLHTGSQTRLCMVSLGLPTASS*LWSRRW
Trigger: CCACCTCCGGCTCCACAGCCAGCTGGAGGCCGTGGG...TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGCCCAGCATTCATACTaGTGTCTCCTCTGCCACCTT +
Preference number: 4 (lower is better)
Translates to: QTRLCMVSLGLRSVQAVRAQHSY*CLLCHL
Trigger: AAGGTGGCAGAGGAGACACCAGTATGAATGCTGGGC...CCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCGCGCAAGAAGCTTGCTaGAATGTTCCAGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: RTGYHQLPLASLLQGPESAQEAC*NVPALR
Trigger: CCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGC...GCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
3UTR CAA 72 bp AAGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTaGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KWACRVQRSARS*LECSSFKGALD
Trigger: ATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACGTAGCTGGTGTTAGATaGGGAAAGCCACTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHVAGVR*GKPLLQ
Trigger: CTGGAGAAGTGGCTTTCCTCATCTAACACCAGCTAC...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AAAGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCCGTGCGGGAACTGTTaGAGTGGAAGTGTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KVGLPGAEKRKKLAGMFQPCGNC*SGSVEV
Trigger: CACTTCAACACTTCCACTTCAACAGTTCCCGCACGG...CTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp CATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGATGTGGACCTCAGAATaGGATCAGGGTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HGVSWPKKRSGRAGTVEVMWTSE*DQGACS
Trigger: GGAGCAGGCACCCTGATCTCATTCTGAGGTCCACAT...CACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACATACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RSARSLLECSSFKGALDTYLWPL*CRVRRA
Trigger: GGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTA...TGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTATACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLYLWPL*CRVRRA
Trigger: GGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTA...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGCAATTACTAACTCTTaGGCTAGGACGGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGAITNS*ARTVHC
Trigger: GCAGTGAACCGTCCTAGCGCAAGAGTTAGTAATTGC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602117.1
CDS-3UTR CCA 90 bp AGTGGGCCTGCCGGGTGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTGGCGAACTTTCTGGTTaGTCTTTCTCCACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SGPAGCREAQEACWNVPAGELSG*SFSTRS
Trigger: ACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCC...AGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCACCCGGCAGGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGTCCTCCATATGCAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: GCLLRPELRTMSTCPPYAVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...TGCATATGGAGGACAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GTTGAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGAGGGTGCCAGGAAAGTaGGCCTGCCGGGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VEVEVLKWKSFHRTGYHQRVPGK*ACRVQR
Trigger: TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCT...CTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGAGAGAGCCGGCCATCCCTTaGAGTCACCTGTGCCACATA +
Preference number: 4 (lower is better)
Translates to: NFYIKSRVPGKWACRVQREPAIP*SHLCHI
Trigger: TATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTC...TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTATGTCCAAGGCACGGATaGCGGTGGAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: KYLHTGSQTRLCMVSLGLCPRHG*RWRGAG
Trigger: GCCGGCTCCTCTCCACCGTCATCCGTGCCTTGGACA...TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp ATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGGGCTGTAGTGAGCTATaGTCACACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: MVSLGLRSVQAVRELLKWGCSEL*SHHCTP
Trigger: TGGAGTGCAGTGGTGTGATCATAGCTCACTACAGCC...CCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp TGCAGAGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGAGGCCGTTTCTCCACTaGAAACTCCGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: CREAQEACWNVPALRAPLRPFLH*KLRVAQ
Trigger: CTGTGCCACACGGAGTTTGCAGTGGAGAAACGGCCT...CAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCTTCAGGCGAACTTTCTaGTTGGTCTTTCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: CWPRRCHVDLRMRSGCLLFRRTF*LVFLHS
Trigger: CGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAA...GAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: QTRLCMVSLGLRSVQAVRVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...CCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CCA 90 bp GTTGAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGACTGGTGTCACATACTaGGGCGGTCCGAGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: VEVEVLKWKSFHRTGYHQTGVTY*GGPRPV
Trigger: TACGGGCCTCGGACCGCCCCAGTATGTGACACCAGT...CTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601283.5
3UTR CAA 72 bp CGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCACAGGACAGGGTATCAC +
Preference number: 4 (lower is better)
Translates to: RSGRAGTVEVEV*KWKSFHRTGYH
Trigger: GTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCCGTATCCTCAGGGCCTaGGGCCCATGGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLRILRA*GPWFQE
Trigger: CTCCTGGAACCATGGGCCTCAGGCCCTGAGGATACG...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp CAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGTTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: QNEIRVPAPSRAQDHVHLLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...CAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp TCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTCCGTGCGGGAACTGTTaGAGTGGAAGTGTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLGLRSVQAVRELLKWKCPCGNC*SGSVEV
Trigger: CACTTCAACACTTCCACTTCAACAGTTCCCGCACGG...ACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTAGGAGCCTCAACCTCTTaGGCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLGASTS*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAAGAGGTTGAGGCTCC...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTAAGCCAGGCATGGTGCTaGAAGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLSQAWC*KPVVPA
Trigger: AGCTGGGACTACAGGCTTTCAGCACCATGCCTGGCT...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACGAAGCGCAAGAAGCTTaGTGGAATGTTCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHEAQEA*WNVPAL
Trigger: TAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTC...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp CAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGGAAGCGCAAGAAGCTTaGTGGAATGTTCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: QNEIRVPAPSRAQDHVHLEAQEA*WNVPAL
Trigger: TAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTC...CAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTAGGGAGCCGGGGAGGTaGCAGCAGTCACCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCREPGR*QQSPVV
Trigger: GACGACGGGTGACTGCTGCCACCTCCCCGGCTCCCT...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAACCTGTGCCACATACTaGGGCGGTCCGAGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: KYLHTGSQTRLCMVSLGLTCATY*GGPRPV
Trigger: TACGGGCCTCGGACCGCCCCAGTATGTGGCACAGGT...TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGGGCGAACTTTCTGGTTaGTCTTTCTCCACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SQTRLCMVSLGLRSVQAVGELSG*SFSTRS
Trigger: ACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCC...CACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGATTCAGGCGAACTTTCTaGTTGGTCTTTCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: QKVPCGPQNEIRVPAPSRFRRTF*LVFLHS
Trigger: CGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAA...TCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp ACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAAGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: TRLCMVSLGLRSVQAVREVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...TTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGACCGGCCACAGCTGCTaGCCCAGAAGGTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLTGHSC*PRRCHV
Trigger: CACATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGT...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp ACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAAGCGCAAGAAGCTTGCTaGAATGTTCCAGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: TRLCMVSLGLRSVQAVREAQEAC*NVPALR
Trigger: CCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGC...TTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGGGTGCCAGGAAAGTaGGCCTGCCGGGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: KYLHTGSQTRLCMVSLGLRVPGK*ACRVQR
Trigger: TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCT...TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCAGCTACTTGGGAGGCTaGGGAGGGAGCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLSYLGG*GGSLNL
Trigger: GAGGTTGAGGCTCCCTCCTCAGCCTCCCAAGTAGCT...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGAGCTACTTGGGAGGCTaGGGAGGGAGCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLSYLGG*GGSLNL
Trigger: GAGGTTGAGGCTCCCTCCTCAGCCTCCCAAGTAGCT...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp GTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTTTGAGGCCAGGAGTTTaGGACGAGCTAGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: VEVLKWKSFHRTGYHQLPLRPGV*DELGQH
Trigger: ATGTTGCCCTAGCTCGTCTCAAACTCCTGGCCTCAA...AGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp AGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACAAGGCCGTTTCTCCACTaGAAACTCCGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: RSARSLLECSSFKGALDTRPFLH*KLRVAQ
Trigger: CTGTGCCACACGGAGTTTGCAGTGGAGAAACGGCCT...TGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp GTTGAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGAGAATGAGATCAGGGTaGCTGCTCCGTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VEVEVLKWKSFHRTGYHQRMRSG*LLRPEL
Trigger: GAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCT...CTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGTACACCGGCCACAGCTaGTGGCCCAGAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLYTGHS*WPRRCH
Trigger: ATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGTGTA...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp TTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACACCGGCCACAGCTGCTTTCAGGCGAACTTTCTaGTTGGTCTTTCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: LLECSSFKGALDTPATAAFRRTF*LVFLHS
Trigger: CGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAA...AGCAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGCGCAAGAAGCTTGCTaGAATGTTCCAGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: LHGVSWPKKRSGRAGTVEAQEAC*NVPALR
Trigger: CCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGC...TTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCCCGTTCGCTCCCTCATaGCAGATCCGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLPFAPS*QIRQKG
Trigger: TCCTTTCTGCCGGATCTGCCATGAGGGAGCGAACGG...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGATTATTCATTCAGGGGTaGGTTTTTGAAACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QKVPCGPQNEIRVPAPSRLFIQG*VFETQC
Trigger: GCACTGCGTTTCAAAAACCCACCCCTGAATGAATAA...TCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCATGTGGACCTCAGAATaGGATCAGGGTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLMWTSE*DQGACS
Trigger: GGAGCAGGCACCCTGATCTCATTCTGAGGTCCACAT...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGATGTGGACCTCAGAATaGGATCAGGGTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLMWTSE*DQGACS
Trigger: GGAGCAGGCACCCTGATCTCATTCTGAGGTCCACAT...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTTCCAGACAGCTCTTATaGACGGCACCCAGCGTGCCG +
Preference number: 4 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCSRQLL*TAPSVP
Trigger: CGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGGA...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AGAAGCGCAAGAAGCTTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACATCACAGACTAGGCTCTaGATGGTGTCTCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RSARSLLECSSFKGALDTSQTRL*MVSLGL
Trigger: TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA...TGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCAGAATGAGATCAGGGTaGCTGCTCCGTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLRMRSG*LLRPEL
Trigger: GAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCT...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTTACACCGGCCACAGCTaGTGGCCCAGAAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCYTGHS*WPRRCH
Trigger: ATGGCACCTTCTGGGCCAGCAGCTGTGGCCGGTGTA...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTGTGGAAGTGTTGAAGTaGAAGTCCTTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: VEVLKWKSFHRTGYHQLPVEVLK*KSFHRT
Trigger: TGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC...AGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CCA 90 bp TTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACACCGGCCACAGCTGCTTTATTCATTCAGGGGTaGGTTTTTGAAACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LLECSSFKGALDTPATAALFIQG*VFETQC
Trigger: GCACTGCGTTTCAAAAACCCACCCCTGAATGAATAA...AGCAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCCAGCATTCATACTaGTGTCACATACTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLAQHSY*CHILGR
Trigger: CCGCCCCAGTATGTGACACCAGTATGAATGCTGGGC...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601283.5
CDS-3UTR TCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCCCGTGCGGGAACTGTTaGAGTGGAAGTGTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLPCGNC*SGSVEV
Trigger: CACTTCAACACTTCCACTTCAACAGTTCCCGCACGG...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR TCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGCCGTGCGGGAACTGTTaGAGTGGAAGTGTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLPCGNC*SGSVEV
Trigger: CACTTCAACACTTCCACTTCAACAGTTCCCGCACGG...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CCA 90 bp CCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCCAGCATTCATACTaGTGTCTCCTCTGCCACCTT +
Preference number: 4 (lower is better)
Translates to: PENIFTQDHRLGSAWCLLAQHSY*CLLCHL
Trigger: AAGGTGGCAGAGGAGACACCAGTATGAATGCTGGGC...CAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR GCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTCACAGACTAGGCTCTaGATGGTGTCTCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLSQTRL*MVSLGL
Trigger: TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp AAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTATCACAGACTAGGCTCTaGATGGTGTCTCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: KYLHTGSQTRLCMVSLGLSQTRL*MVSLGL
Trigger: TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGA...TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR GCA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTAGAAGCGCAAGAAGCTTaGTGGAATGTTCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLEAQEA*WNVPAL
Trigger: TAAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTC...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCGGCGAACTTTCTGGTTaGTCTTTCTCCACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLGELSG*SFSTRS
Trigger: ACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCC...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CCA 90 bp GTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTTTATTCATTCAGGGGTaGGTTTTTGAAACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VEVLKWKSFHRTGYHQLPLFIQG*VFETQC
Trigger: GCACTGCGTTTCAAAAACCCACCCCTGAATGAATAA...AGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR TCA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTTTGAGGCCAGGAGTTTaGGACGAGCTAGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCLRPGV*DELGQH
Trigger: ATGTTGCCCTAGCTCGTCTCAAACTCCTGGCCTCAA...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602117.1
CDS-3UTR TCA 90 bp AAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTTGGCCTATTGAAGTGGAAGTGTTaGAGTGGAAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: KYLHTGSQTRLCMVSLGLLKWKC*SGSPST
Trigger: TGTGGAAGGACTTCCACTTCAACACTTCCACTTCAA...TAGGCCAAGAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS TCA 90 bp GTCACCCGTCGTCATGGCCACCGGGAGCCCCGTATCCTCAGGGCCTaGGGCCCATGGTTCCAGGAGCCTGATCCGCGGCCGGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VTRRHGHREPRILRA*GPWFQEPDPRPGRA
Trigger: CGCCCGGCCCGGCCGCGGATCAGGCTCCTGGAACCATGGGCCTCAGGCCCTGAGGATACGGGGCTCCCGGTGGCCATGACGACGGGTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000381035.8
CDS CCA 90 bp GGCCTTGACACGGGAACTGAGGTCCCCGCGTCCCCGAGAAGGCTGTaGCCAAGGGATCGAGCCCAGCCGTCCCGCCCGGGTGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: GLDTGTEVPASPRRL*PRDRAQPSRPGAEL
Trigger: GAGCTCGGCACCCGGGCGGGACGGCTGGGCTCGATCCCTTGGCCACAGCCTTCTCGGGGACGCGGGGACCTCAGTTCCCGTGTCAAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS CCA 90 bp GAGAAGGCAGGGCTGCCGGAGCAGTCACACAGGGAGCCGGGGAGGTaGCAGCAGTCACCCGTCGTCATGGCCACCGGGAGCCCCGTATCC +
Preference number: 5 (lower is better)
Translates to: EKAGLPEQSHREPGR*QQSPVVMATGSPVS
Trigger: GGATACGGGGCTCCCGGTGGCCATGACGACGGGTGACTGCTGCCACCTCCCCGGCTCCCTGTGTGACTGCTCCGGCAGCCCTGCCTTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000595213.1
ENST00000601283.5
ENST00000601724.5
ENST00000602117.1
CDS CCA 90 bp AGGGCGATGGTGAGGGCAATGAGACCCACGGCCTCCAGCTGGCTGTaGAGCCGGAGGTGGTCCTGGGCCCCGCGCAGGCACAACCAGCCT +
Preference number: 5 (lower is better)
Translates to: RAMVRAMRPTASSWL*SRRWSWAPRRHNQP
Trigger: AGGCTGGTTGTGCCTGCGCGGGGCCCAGGACCACCTCCGGCTCCACAGCCAGCTGGAGGCCGTGGGTCTCATTGCCCTCACCATCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000594796.1
ENST00000602117.1
CDS CCA 90 bp AGTCACACAGGGAGCCGGGGAGGTGGCAGCAGTCACCCGTCGTCATaGCCACCGGGAGCCCCGTATCCTCAGGGCCTGAGGCCCATGGTT +
Preference number: 5 (lower is better)
Translates to: SHTGSRGGGSSHPSS*PPGAPYPQGLRPMV
Trigger: AACCATGGGCCTCAGGCCCTGAGGATACGGGGCTCCCGGTGGCCATGACGACGGGTGACTGCTGCCACCTCCCCGGCTCCCTGTGTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000595213.1
ENST00000601283.5
ENST00000601724.5
ENST00000602117.1
CDS GCA 90 bp GTCTCCTCTGCCACCTTCTTCAGGAGTCCAGCTGCCAGTGGAGAATaGTGGGGGCCCTCGGGGCTGTCCGCCTCCCGGATCTTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: VSSATFFRSPAASGE*WGPSGLSASRIFRR
Trigger: TCGCCTGAAGATCCGGGAGGCGGACAGCCCCGAGGGCCCCCAGCATTCTCCACTGGCAGCTGGACTCCTGAAGAAGGTGGCAGAGGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp GGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCCCAGCAGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GYHQLPLASLLQGPESPAVASTT*EKAGLP
Trigger: CGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTAC...TGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS TCA 90 bp TGTGTCCAAGGCACGGATGACGGTGGAGAGGAGCCGGCCATCCCTTaGAGTCACCTGTGCCACATACTGGGGCGGTCCGAGGCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: CVQGTDDGGEEPAIP*SHLCHILGRSEARS
Trigger: GCTACGGGCCTCGGACCGCCCCAGTATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTCCTCTCCACCGTCATCCGTGCCTTGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000601724.5
ENST00000602117.1
CDS GCA 90 bp GCCACTTCTCCAGACAGCTCTTATGCACGGCACCCAGCGTGCCGGTaGAGCCACACGGGGACAGCAAGCACTCCCCGTTCGCTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: ATSPDSSYARHPACR*SHTGTASTPRSLPH
Trigger: ATGAGGGAGCGAACGGGGAGTGCTTGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGGAGAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000602117.1
CDS CCA 90 bp GTGGAGAGGAGCCGGCCATCCCTTGAAGTCACCTGTGCCACATACTaGGGCGGTCCGAGGCCCGTAGCCTCCACGACCTTGGAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VERSRPSLEVTCATY*GGPRPVASTTLEKA
Trigger: TGCCTTCTCCAAGGTCGTGGAGGCTACGGGCCTCGGACCGCCCCAGTATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTCCTCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000595213.1
ENST00000601724.5
ENST00000602117.1
CDS GCA 90 bp AGGAAAGCCACTTCTCCAGACAGCTCTTATGCACGGCACCCAGCGTaGCGGTGCAGCCACACGGGGACAGCAAGCACTCCCCGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: RKATSPDSSYARHPA*RCSHTGTASTPRSL
Trigger: GAGCGAACGGGGAGTGCTTGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGGAGAAGTGGCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000602117.1
CDS-3UTR CAA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGVASTT*EKAGLP
Trigger: CGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTAC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS CCA 90 bp GTGCAGCCACACGGGGACAGCAAGCACTCCCCGTTCGCTCCCTCATaGCAGATCCGGCAGAAAGGACCATCACTCGGTGTGTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: VQPHGDSKHSPFAPS*QIRQKGPSLGVSKA
Trigger: TGCCTTGGACACACCGAGTGATGGTCCTTTCTGCCGGATCTGCCATGAGGGAGCGAACGGGGAGTGCTTGCTGTCCCCGTGTGGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000602117.1
CDS CCA 90 bp CAGAAGCCCCATCAGGTTGGCAATGGGATGACCCAGTTTCACAGGTaGGGAAACCGAGGCTCGGAGAGGCGCCTATGTGTGCCGGACCCC +
Preference number: 5 (lower is better)
Translates to: QKPHQVGNGMTQFHR*GNRGSERRLCVPDP
Trigger: GGGGTCCGGCACACATAGGCGCCTCTCCGAGCCTCGGTTTCCCCACCTGTGAAACTGGGTCATCCCATTGCCAACCTGATGGGGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS-3UTR CAA 90 bp AGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCGGGAGCCTCAACCTCTaGAGCCCAGGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: RTGYHQLPLASLLQGPESGSLNL*SPGVQG
Trigger: GCCTTGAACTCCTGGGCTCAAGAGGTTGAGGCTCCC...GCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CAA 90 bp CAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCCCAGTGTAATCCCAGCGCTTaGGGAGGTCCAAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QGITSYLWPLCCRVRRAQCNPSA*GGPSRR
Trigger: CCTCCTGCTTGGACCTCCCAAAGCGCTGGGATTACA...CTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS CCA 90 bp CCTCGGGGCTGTCCGCCTCCCGGATCTTCAGGCGAACTTTCTGGTTaGTCTTTCTCCACTCGGAGTACAGCTGGCAGTGGTAGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PRGCPPPGSSGELSG*SFSTRSTAGSGSGR
Trigger: CCTTCCGCTACCACTGCCAGCTGTACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAAGATCCGGGAGGCGGACAGCCCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp GCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: ALHGVSWPKKRSGRAGTVVASTT*EKAGLP
Trigger: CGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTAC...AACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CAA 90 bp GGCCACAGCTGCTGGCCCAGAAGGTGCCATGTGGACCTCAGAATGAGATCAGGGGGAGCCGGCCATCCCTaGAAGTCACCTGTGCCACAT +
Preference number: 5 (lower is better)
Translates to: GHSCWPRRCHVDLRMRSGGAGHP*KSPVPH
Trigger: ATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTCC...CCCTGATCTCATTCTGAGGTCCACATGGCACCTTCTGGGCCAGCAGCTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS GCA 90 bp CCTTCCACAGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAGCATTCATACTGGTGTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PSTGQGITSYLWPLC*RVRRAQHSYWCLLC
Trigger: GCAGAGGAGACACCAGTATGAATGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCTGTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp ATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGTCCTCCATAGCTTTAAGGGCGCCCTaGATACACCGGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: IRVPAPSRAQDHVHLSSIALRAP*IHRPQL
Trigger: CAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGC...TATGGAGGACAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp CAGACTAGGCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGGGAGCCTCAACCTCTaGAGCCCAGGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: QTRLCMVSLGLRSVQAVRGSLNL*SPGVQG
Trigger: GCCTTGAACTCCTGGGCTCAAGAGGTTGAGGCTCCC...CCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGCCTAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS GCA 90 bp AGTCCTTCCACAGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCCCAGCATTCATACTGGTGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SPSTGQGITSYLWPL*CRVRRAQHSYWCLL
Trigger: GAGGAGACACCAGTATGAATGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp TCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGGAAGTGTGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SLGLRSVQAVRELLKWKCVASTT*EKAGLP
Trigger: CGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTAC...ACACTTCCACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS GCA 90 bp CCTTCCACAGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAGCATTCATACTGGTGTCACATACTG +
Preference number: 5 (lower is better)
Translates to: PSTGQGITSYLWPLC*RVRRAQHSYWCHIL
Trigger: CAGTATGTGACACCAGTATGAATGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCTGTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601283.5
CDS-3UTR CAA 90 bp GGGTATCACCAGCTACCTCTGGCCTCTCTGCTGCAGGGTCCGGAGAGCCCAGCAGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GYHQLPLASLLQGPESPAVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...TGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CAA 90 bp TTGCTGGAATGTTCCAGCTTTAAGGGCGCCCTTGATACACCGGCCACAGCTGCTGCTTTAAGGGCGCCCTaGATACACCGGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: LLECSSFKGALDTPATAAALRAP*IHRPQL
Trigger: CAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGC...AGCAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGCTGGAACATTCCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS TCA 90 bp CAGTTGCCTACTGTGTGTCAGGCGTTTTCTGCACCAGCCACCTCCTaGATCCTCCCAGAAGCCCCATCAGGTTGGCAATGGGATGACCCA +
Preference number: 5 (lower is better)
Translates to: QLPTVCQAFSAPATS*ILPEAPSGWQWDDP
Trigger: TGGGTCATCCCATTGCCAACCTGATGGGGCTTCTGGGAGGATTCAGGAGGTGGCTGGTGCAGAAAACGCCTGACACACAGTAGGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS GCA 90 bp CGCTCTGAGAAGGAGGTTGGGGAAGGGCATTGGCCACTTAGCAGTTaGCTACTGTGTGTCAGGCGTTTTCTGCACCAGCCACCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: RSEKEVGEGHWPLSS*LLCVRRFLHQPPPE
Trigger: TTCAGGAGGTGGCTGGTGCAGAAAACGCCTGACACACAGTAGGCAACTGCTAAGTGGCCAATGCCCTTCCCCAACCTCCTTCTCAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS GCA 90 bp AGTCCTTCCACAGGACAGGGTATCACCAGCTACCTCTGGCCTCTCTaGTGCAGGGTCCGGAGAGCCCAGCATTCATACTGGTGTCACATA +
Preference number: 5 (lower is better)
Translates to: SPSTGQGITSYLWPL*CRVRRAQHSYWCHI
Trigger: TATGTGACACCAGTATGAATGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601283.5
CDS-3UTR CAA 90 bp CATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGAAGTGAGGCGAACTTTCTGGTaGGTCTTTCTCCACTCGGAG +
Preference number: 5 (lower is better)
Translates to: HGVSWPKKRSGRAGTVEVRRTFW*VFLHSE
Trigger: CTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCT...CACTTCAACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp CAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACCTGAGAAGCGCAAGAAGCTaGCTGGAATGTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QNEIRVPAPSRAQDHVHLRSARS*LECSSF
Trigger: AAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT...CAGGTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp CCTCAGAATGAGATCAGGGTGCCTGCTCCGTCCAGAGCTCAGGACCATGTCCACAGAAGCGCAAGAAGCTaGCTGGAATGTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: PQNEIRVPAPSRAQDHVHRSARS*LECSSF
Trigger: AAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT...GTGGACATGGTCCTGAGCTCTGGACGGAGCAGGCACCCTGATCTCATTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp GCTCTGCATGGTGTCTCTTGGCCTAAGAAGCGTTCAGGCCGTGCGGGAACTGTTGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ALHGVSWPKKRSGRAGTVVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...AACAGTTCCCGCACGGCCTGAACGCTTCTTAGGCCAAGAGACACCATGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CAA 90 bp GTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTACCTAGGCGAACTTTCTGGTaGGTCTTTCTCCACTCGGAG +
Preference number: 5 (lower is better)
Translates to: VEVLKWKSFHRTGYHQLPRRTFW*VFLHSE
Trigger: CTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCT...AGGTAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp GAAGTGGAAGTGTTGAAGTGGAAGTCCTTCCACAGGACAGGGTATCACCAGCTAAGGCGAACTTTCTGGTaGGTCTTTCTCCACTCGGAG +
Preference number: 5 (lower is better)
Translates to: EVEVLKWKSFHRTGYHQLRRTFW*VFLHSE
Trigger: CTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCT...TAGCTGGTGATACCCTGTCCTGTGGAAGGACTTCCACTTCAACACTTCCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp AACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTCTCTGTAATCCCAGCGCTTaGGGAGGTCCAAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: NPENIFTQDHRLGSAWCLCNPSA*GGPSRR
Trigger: CCTCCTGCTTGGACCTCCCAAAGCGCTGGGATTACA...GAGACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601283.5
ENST00000602117.1
CDS-3UTR CAA 90 bp AACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGAGAGTTGAAGTGGAAGTGTaGAAGTGGAAGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: NFYIKSRVPGKWACRVQRVEVEV*KWKSFH
Trigger: GTGGAAGGACTTCCACTTCAACACTTCCACTTCAAC...TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp AAAAACCCTGAAAATATCTTCACACAGGATCACAGACTAGGCTCTGCATGGTGTGCTTTAAGGGCGCCCTaGATACACCGGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: KNPENIFTQDHRLGSAWCALRAP*IHRPQL
Trigger: CAGCTGTGGCCGGTGTATCAAGGGCGCCCTTAAAGC...ACACCATGCAGAGCCTAGTCTGTGATCCTGTGTGAAGATATTTTCAGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS-3UTR CAA 90 bp AACTTTTATATAAAGTCGAGGGTGCCAGGAAAGTGGGCCTGCCGGGTGCAGAGAAGAAGCGCAAGAAGCTaGCTGGAATGTTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: NFYIKSRVPGKWACRVQRRSARS*LECSSF
Trigger: AAAGCTGGAACATTCCAGCAAGCTTCTTGCGCTTCT...TCTCTGCACCCGGCAGGCCCACTTTCCTGGCACCCTCGACTTTATATAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS CCA 72 bp GAGCTCCGGCCTCGAACCCGGGGCCGGCCCGCGGACTaGCGTCCTCCGGCCCTACCTGCAGGCCCGTGCCTA +
Preference number: 6 (lower is better)
Translates to: ELRPRTRGRPAD*RPPALPAGPCL
Trigger: TAGGCACGGGCCTGCAGGTAGGGCCGGAGGACGCCAGTCCGCGGGCCGGCCCCGGGTTCGAGGCCGGAGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS CCA 72 bp ACGGGAACTGAGGTCCCCGCGTCCCCGAGAAGGCTGTaGCCAAGGGATCGAGCCCAGCCGTCCCGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: TGTEVPASPRRL*PRDRAQPSRPG
Trigger: ACCCGGGCGGGACGGCTGGGCTCGATCCCTTGGCCACAGCCTTCTCGGGGACGCGGGGACCTCAGTTCCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS TCA 72 bp CGTCATGGCCACCGGGAGCCCCGTATCCTCAGGGCCTaGGGCCCATGGTTCCAGGAGCCTGATCCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: RHGHREPRILRA*GPWFQEPDPRP
Trigger: CGGCCGCGGATCAGGCTCCTGGAACCATGGGCCTCAGGCCCTGAGGATACGGGGCTCCCGGTGGCCATGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215555.7
ENST00000381035.8
CDS CAA 90 bp TGTGCCACATACTGGGGCGGTCCGAGGCCCGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCGGAGCAGTCACACAGGGAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: CATYWGGPRPVASTT*EKAGLPEQSHREPG
Trigger: CCCCGGCTCCCTGTGTGACTGCTCCGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTACGGGCCTCGGACCGCCCCAGTATGTGGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000595213.1
ENST00000601724.5
ENST00000602117.1
CDS CAA 90 bp GGTGTCACATACTGGGGCGGTCCGAGGCCCGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCGGAGCAGTCACACAGGGAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GVTYWGGPRPVASTT*EKAGLPEQSHREPG
Trigger: CCCCGGCTCCCTGTGTGACTGCTCCGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTACGGGCCTCGGACCGCCCCAGTATGTGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601283.5
CDS GCA 72 bp GCCACCTTCTTCAGGAGTCCAGCTGCCAGTGGAGAATaGTGGGGGCCCTCGGGGCTGTCCGCCTCCCGGATC +
Preference number: 6 (lower is better)
Translates to: ATFFRSPAASGE*WGPSGLSASRI
Trigger: GATCCGGGAGGCGGACAGCCCCGAGGGCCCCCAGCATTCTCCACTGGCAGCTGGACTCCTGAAGAAGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS CAA 72 bp TACTGGGGCGGTCCGAGGCCCGTAGCCTCCACGACCTaGGAGAAGGCAGGGCTGCCGGAGCAGTCACACAGG +
Preference number: 6 (lower is better)
Translates to: YWGGPRPVASTT*EKAGLPEQSHR
Trigger: CCTGTGTGACTGCTCCGGCAGCCCTGCCTTCTCCAAGGTCGTGGAGGCTACGGGCCTCGGACCGCCCCAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000595213.1
ENST00000601283.5
ENST00000601724.5
ENST00000602117.1
CDS TCA 72 bp CGTCATGGCCACCGGGAGCCCCGTATCCTCAGGGCCTaGGGCCCATGGTTCCAGGAGCCTGTAATCCCAGCG +
Preference number: 6 (lower is better)
Translates to: RHGHREPRILRA*GPWFQEPVIPA
Trigger: CGCTGGGATTACAGGCTCCTGGAACCATGGGCCTCAGGCCCTGAGGATACGGGGCTCCCGGTGGCCATGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000595142.5
ENST00000595213.1
ENST00000601283.5
ENST00000601724.5
ENST00000602117.1
CDS GCA 72 bp CCAGACAGCTCTTATGCACGGCACCCAGCGTGCCGGTaGAGCCACACGGGGACAGCAAGCACTCCCCGTTCG +
Preference number: 6 (lower is better)
Translates to: PDSSYARHPACR*SHTGTASTPRS
Trigger: CGAACGGGGAGTGCTTGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000602117.1
CDS TCA 72 bp GGCACGGATGACGGTGGAGAGGAGCCGGCCATCCCTTaGAGTCACCTGTGCCACATACTGGGGCGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: GTDDGGEEPAIP*SHLCHILGRSE
Trigger: CTCGGACCGCCCCAGTATGTGGCACAGGTGACTTCAAGGGATGGCCGGCTCCTCTCCACCGTCATCCGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000595142.5
ENST00000595213.1
ENST00000601724.5
ENST00000602117.1
CDS CCA 72 bp AGCCGGCCATCCCTTGAAGTCACCTGTGCCACATACTaGGGCGGTCCGAGGCCCGTAGCCTCCACGACCTTG +
Preference number: 6 (lower is better)
Translates to: SRPSLEVTCATY*GGPRPVASTTL
Trigger: CAAGGTCGTGGAGGCTACGGGCCTCGGACCGCCCCAGTATGTGGCACAGGTGACTTCAAGGGATGGCCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000595142.5
ENST00000595213.1
ENST00000601724.5
ENST00000602117.1
CDS GCA 72 bp ACTTCTCCAGACAGCTCTTATGCACGGCACCCAGCGTaGCGGTGCAGCCACACGGGGACAGCAAGCACTCCC +
Preference number: 6 (lower is better)
Translates to: TSPDSSYARHPA*RCSHTGTASTP
Trigger: GGGAGTGCTTGCTGTCCCCGTGTGGCTGCACCGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGGAGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000602117.1
CDS CCA 72 bp CACGGGGACAGCAAGCACTCCCCGTTCGCTCCCTCATaGCAGATCCGGCAGAAAGGACCATCACTCGGTGTG +
Preference number: 6 (lower is better)
Translates to: HGDSKHSPFAPS*QIRQKGPSLGV
Trigger: CACACCGAGTGATGGTCCTTTCTGCCGGATCTGCCATGAGGGAGCGAACGGGGAGTGCTTGCTGTCCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000601724.5
ENST00000602117.1
CDS GCA 72 bp CAGCCACTCTGTGAGGGGTCGAGGCCGTTTCTCCACTaGAAACTCCGTGTGGCACAGCTCGCAGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: QPLCEGSRPFLH*KLRVAQLAVAG
Trigger: ACCAGCTACTGCGAGCTGTGCCACACGGAGTTTGCAGTGGAGAAACGGCCTCGACCCCTCACAGAGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000594796.1
ENST00000602117.1
CDS GCA 72 bp GGAGACCTCTGTGAGGGGTCGAGGCCGTTTCTCCACTaGAAACTCCGTGTGGCACAGCTCGCAGTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: GDLCEGSRPFLH*KLRVAQLAVAG
Trigger: ACCAGCTACTGCGAGCTGTGCCACACGGAGTTTGCAGTGGAGAAACGGCCTCGACCCCTCACAGAGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381035.8
CDS GCA 72 bp TTAGATGAGGAAAGCCACTTCTCCAGACAGCTCTTATaGACGGCACCCAGCGTGCCGGTGCAGCCACACGGG +
Preference number: 6 (lower is better)
Translates to: LDEESHFSRQLL*TAPSVPVQPHG
Trigger: CCCGTGTGGCTGCACCGGCACGCTGGGTGCCGTGCATAAGAGCTGTCTGGAGAAGTGGCTTTCCTCATCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000602117.1
CDS GCA 72 bp GGACAGGGTATCACCAGCTACCTCTGGCCTCTCTGCTaGAGGGTCCGGAGAGCCCAGCATTCATACTGGTGT +
Preference number: 6 (lower is better)
Translates to: GQGITSYLWPLC*RVRRAQHSYWC
Trigger: ACACCAGTATGAATGCTGGGCTCTCCGGACCCTGCAGCAGAGAGGCCAGAGGTAGCTGGTGATACCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000601283.5
ENST00000602117.1
CDS CCA 72 bp GGGCTGTCCGCCTCCCGGATCTTCAGGCGAACTTTCTaGTTGGTCTTTCTCCACTCGGAGTACAGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GLSASRIFRRTF*LVFLHSEYSWQ
Trigger: CTGCCAGCTGTACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAAGATCCGGGAGGCGGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS TCA 72 bp AGAAAGGACCATCACTCGGTGTGTCCAAGGCACGGATaGCGGTGGAGAGGAGCCGGCCATCCCTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: RKDHHSVCPRHG*RWRGAGHPLKS
Trigger: TGACTTCAAGGGATGGCCGGCTCCTCTCCACCGTCATCCGTGCCTTGGACACACCGAGTGATGGTCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000594796.1
ENST00000595142.5
ENST00000601724.5
ENST00000602117.1
CDS CCA 72 bp CAGAGCCGCTCTGAGAAGGAGGTTGGGGAAGGGCATTaGCCACTTAGCAGTTGCCTACTGTGTGTCAGGCGT +
Preference number: 6 (lower is better)
Translates to: QSRSEKEVGEGH*PLSSCLLCVRR
Trigger: ACGCCTGACACACAGTAGGCAACTGCTAAGTGGCCAATGCCCTTCCCCAACCTCCTTCTCAGAGCGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS CAA 72 bp CTGTCCGCCTCCCGGATCTTCAGGCGAACTTTCTGGTaGGTCTTTCTCCACTCGGAGTACAGCTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LSASRIFRRTFW*VFLHSEYSWQW
Trigger: CCACTGCCAGCTGTACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAAGATCCGGGAGGCGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS TCA 72 bp ACTGTGTGTCAGGCGTTTTCTGCACCAGCCACCTCCTaGATCCTCCCAGAAGCCCCATCAGGTTGGCAATGG +
Preference number: 6 (lower is better)
Translates to: TVCQAFSAPATS*ILPEAPSGWQW
Trigger: CCATTGCCAACCTGATGGGGCTTCTGGGAGGATTCAGGAGGTGGCTGGTGCAGAAAACGCCTGACACACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595213.1
CDS CCA 72 bp TGTCCGCCTCCCGGATCTTCAGGCGAACTTTCTGGTTaGTCTTTCTCCACTCGGAGTACAGCTGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: CPPPGSSGELSG*SFSTRSTAGSG
Trigger: ACCACTGCCAGCTGTACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAAGATCCGGGAGGCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215555.7
ENST00000381035.8
ENST00000602117.1
CDS GCA 72 bp AAGGAGGTTGGGGAAGGGCATTGGCCACTTAGCAGTTaGCTACTGTGTGTCAGGCGTTTTCTGCACCAGCCA +
Preference number: 6 (lower is better)
Translates to: KEVGEGHWPLSS*LLCVRRFLHQP
Trigger: TGGCTGGTGCAGAAAACGCCTGACACACAGTAGGCAACTGCTAAGTGGCCAATGCCCTTCCCCAACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595213.1