RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MARCHF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145416

Ensembl transcript IDs: ENST00000274056.11, ENST00000339875.9, ENST00000503008.5, ENST00000503104.5, ENST00000505391.5, ENST00000505517.1, ENST00000507270.5, ENST00000508725.5, ENST00000510075.1, ENST00000510696.1, ENST00000510786.1, ENST00000511245.1, ENST00000512214.1, ENST00000514618.5, ENST00000515471.5

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCGTCTGTCTGGGACTATAATCACGTGTAGAAGCAGCGCAGAGTaGGATTTAATGCTGGGGTGTTTTGAAAGACTCCTTCAGTCTACA +
Preference number: 1 (lower is better)
Translates to: GRLSGTIITCRSSAE*DLMLGCFERLLQST
Trigger: TGTAGACTGAAGGAGTCTTTCAAAACACCCCAGCATTAAATCTCACTCTGCGCTGCTTCTACACGTGATTATAGTCCCAGACAGACGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR CCA 90 bp ATCAATACATACAAAGACCAAACCACACAGGTGATCGCGATTACGTaGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: INTYKDQTTQVIAIT*NVTEQNIFLLSLVV
Trigger: GACCACAAGTGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCGATCACCTGTGTGGTTTGGTCTTTGTATGTATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR TCA 90 bp GATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGCAGTGTaGTACTCATGCTTTGGTTCTTATGGCCATCATTGCCTTTTCATG +
Preference number: 1 (lower is better)
Translates to: DNYKVHPCDTQICAV*YSCFGSYGHHCLFM
Trigger: CATGAAAAGGCAATGATGGCCATAAGAACCAAAGCATGAGTATCACACTGCACAAATCTGGGTATCACATGGATGCACTTTGTAATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR GCA 90 bp GAAAGACTCCTTCAGTCTACACCTATCTTCCTTCAGGTTACACATTaGTGTATCTCAGGTTGTTGGGCTCACTTTAGTTTAGATTTTGTT +
Preference number: 1 (lower is better)
Translates to: ERLLQSTPIFLQVTH*CISGCWAHFSLDFV
Trigger: AACAAAATCTAAACTAAAGTGAGCCCAACAACCTGAGATACAGCAATGTGTAACCTGAAGGAAGATAGGTGTAGACTGAAGGAGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp TGTCTGGGCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCTGTCATTGCCTTGCTTaGTTTCCTCCGCTGTCCGGT +
Preference number: 2 (lower is better)
Translates to: CLGNFVQRSHGCRPSACACHCLA*FPPLSG
Trigger: ACCGGACAGCGGAGGAAATCAAGCAAGGCAATGACA...GGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGCCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR GCA 90 bp CACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCGGCACACGTGGAATCTaGACAGGTCTGTGGTCACTC +
Preference number: 2 (lower is better)
Translates to: HCTYMKTRPPVKPMATTTGTRGI*TGLWSL
Trigger: GAGTGACCACAGACCTGTGCAGATTCCACGTGTGCC...GGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATGTACGTACAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR CCA 90 bp CACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCCAGCTATGGCACACGTaGAATCTGCACAGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: HCTYMKTRPPVKPMATTTQLWHT*NLHRSV
Trigger: CACAGACCTGTGCAGATTCCACGTGTGCCATAGCTG...GGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATGTACGTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR TCA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGTCTCCCACTCTTCAGTaGACAGCTATGGCACACGTG +
Preference number: 2 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRSPTLQ*TAMAHV
Trigger: CACGTGTGCCATAGCTGTTCACTGAAGAGTGGGAGA...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR GCA 90 bp GCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGCCATTGTCATTGCCTTaGTTGATTTCCTCCGCTGTC +
Preference number: 2 (lower is better)
Translates to: AILYKDHTVVGLQPAPQLPLSLP*LISSAV
Trigger: GACAGCGGAGGAAATCAAGCAAGGCAATGACAATGG...CAGTTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR CCA 90 bp TGTCTGGGCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCTCCTCCTTTCACTTGTaGTCATCTGTAGTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: CLGNFVQRSHGCRPSACASSFHL*SSVVSP
Trigger: GGGAGAAACTACAGATGACCACAAGTGAAAGGAGGA...GGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGCCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR TCA 90 bp GCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGCGATTACGTGGAATGTaGCAGAGCAGAATATTTTCC +
Preference number: 2 (lower is better)
Translates to: AILYKDHTVVGLQPAPQLRLRGM*QSRIFS
Trigger: GGAAAATATTCTGCTCTGTCACATTCCACGTAATCG...CAGTTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR TCA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGGTCATTTGTAGTGGCTaGGGGCTAGAAAGATATTCT +
Preference number: 2 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRVICSG*GLERYS
Trigger: AGAATATCTTTCTAGCCCTCAGCCACTACAAATGAC...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATAGAAGCAGCGCAGAGTaGGATTTAATGCTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNRSSAE*DLMLGC
Trigger: ACACCCCAGCATTAAATCTCACTCTGCGCTGCTTCT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTACGCTATTACTTCATaGGCTCCTGGGCATTTGGTC +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSYAITS*APGHLV
Trigger: GACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp CGCGATTACGTGGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTTTCAGTGAACAGCTATaGCACACGTGGAATCTGCAC +
Preference number: 2 (lower is better)
Translates to: RDYVECDRAEYFPPFTCGFSEQL*HTWNLH
Trigger: GTGCAGATTCCACGTGTGCCATAGCTGTTCACTGAA...ACCACAAGTGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR CCA 90 bp TGGCTGAGGGCTAGAAAGATATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATGTGATCGCGATTACGTaGAATGTGACAGAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: WLRARKIFFGEETPNRFHVIAIT*NVTEQN
Trigger: ATTCTGCTCTGTCACATTCCACGTAATCGCGATCAC...ATGGAACCTGTTGGGAGTTTCTTCACCGAAGAATATCTTTCTAGCCCTCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR TCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTTTCCCCTGTTACTGTaGAGAAGAGTATCATGGGTC +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSFPLLL*RRVSWV
Trigger: GACCCATGATACTCTTCTTCACAGTAACAGGGGAAA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTACTTCATGGGCTCCTaGGCATTTGGTCTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSYFMGS*AFGLFV
Trigger: AACAAACAGACCAAATGCCCAGGAGCCCATGAAGTA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTGTGGCCTGCATTTGTaGCTGTTGTGTTTCTATTGG +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSCGLHL*LLCFYW
Trigger: CCAATAGAAACACAACAGCCACAAATGCAGGCCACA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCCATCATCTGTCAAGTTaGCACCTCATATGGATGAAA +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSHHLSS*HLIWMK
Trigger: TTTCATCCATATGAGGTGTCAACTTGACAGATGATG...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTTTCCCTTTTTCCTATaGTCTGTGAAGAACAAGCAC +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSFPFFL*SVKNKH
Trigger: GTGCTTGTTCTTCACAGATCATAGGAAAAAGGGAAA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTACGCTATTACTTCATaGGCTCCTGGGCATTTGGTC +
Preference number: 2 (lower is better)
Translates to: KQHVAITNPQGKWISKKLYAITS*APGHLV
Trigger: GACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTCAAGTCTGTATTCTTaGACTTTTCCCCTGTTACTG +
Preference number: 2 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHSSLYS*TFPLLL
Trigger: CAGTAACAGGGGAAAAGTTCAAGAATACAGACTTGA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATACGCTATTACTTCATaGGCTCCTGGGCATTTGGTC +
Preference number: 2 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAYAITS*APGHLV
Trigger: GACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATGCTTTGGTTCTTATaGCCATCATTGCCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSMLWFL*PSLPFH
Trigger: ATGAAAAGGCAATGATGGCCATAAGAACCAAAGCAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTTTTCCCCTGTTACTGTaGAGAAGAGTATCATGGGTC +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICFPLLL*RRVSWV
Trigger: GACCCATGATACTCTTCTTCACAGTAACAGGGGAAA...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATGACACCTCATATGGATaGAATAAGCCTTACACATTT +
Preference number: 2 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNDTSYG*NKPYTF
Trigger: AAATGTGTAAGGCTTATTTCATCCATATGAGGTGTC...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTTTTTGTTTTCTAACTaGGCAAGGGAAATCCTGTCA +
Preference number: 2 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNFLFSN*AREILS
Trigger: TGACAGGATTTCCCTTGCTCAGTTAGAAAACAAAAA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTACTTCATGGGCTCCTaGGCATTTGGTCTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNYFMGS*AFGLFV
Trigger: AACAAACAGACCAAATGCCCAGGAGCCCATGAAGTA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTTGTGGCCTGCATTTGTaGCTGTTGTGTTTCTATTGG +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICCGLHL*LLCFYW
Trigger: CCAATAGAAACACAACAGCCACAAATGCAGGCCACA...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR TCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGTCATTTGTAGTGGCTaGGGGCTAGAAAGATATTCT +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICVICSG*GLERYS
Trigger: AGAATATCTTTCTAGCCCTCAGCCACTACAAATGAC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR TCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTAGTTCACTTCCAATGTaGCTTAGGGATAATGCAGAC +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICSSLPM*LRDNAD
Trigger: GTCTGCATTATCCCTAAGTCACATTGGAAGTGAACT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTGTGATACTCATGCTTTaGTTCTTATGGCCATCATTG +
Preference number: 2 (lower is better)
Translates to: KQHVAITNPQGKWISKKLVILML*FLWPSL
Trigger: CAATGATGGCCATAAGAACCAAAGCATGAGTATCAC...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAGTCATTTGTAGTGGCTaGGGGCTAGAAAGATATTCT +
Preference number: 2 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQVICSG*GLERYS
Trigger: AGAATATCTTTCTAGCCCTCAGCCACTACAAATGAC...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR TCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTCATCATCTGTCAAGTTaGCACCTCATATGGATGAAA +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICHHLSS*HLIWMK
Trigger: TTTCATCCATATGAGGTGTCAACTTGACAGATGATG...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR GCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGGGAAGTTAAATATTTaGATCTGTGGCCTGCATTTG +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICGKLNI*ICGLHL
Trigger: CAAATGCAGGCCACAGATGCAAATATTTAACTTCCC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR CAA 90 bp TTTAGCCGATCATCCTCCACTGTGAAATCAGCCCTGCAACGTATCTaGTTTAGGTTCGTACAGAATTTAAACAATATTTTCCATGTTAAT +
Preference number: 2 (lower is better)
Translates to: FSRSSSTVKSALQRI*FRFVQNLNNIFHVN
Trigger: ATTAACATGGAAAATATTGTTTAAATTCTGTACGAACCTAAACAAGATACGTTGCAGGGCTGATTTCACAGTGGAGGATGATCGGCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCAAGTCTGTATTCTTaGACTTTTCCCCTGTTACTG +
Preference number: 2 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSSLYS*TFPLLL
Trigger: CAGTAACAGGGGAAAAGTTCAAGAATACAGACTTGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGGGAAGTTAAATATTTaGATCTGTGGCCTGCATTTG +
Preference number: 2 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYGKLNI*ICGLHL
Trigger: CAAATGCAGGCCACAGATGCAAATATTTAACTTCCC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATAAATATTTGCATCTGTaGCCTGCATTTGTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYKYLHL*PAFVAV
Trigger: AACAGCCACAAATGCAGGCCACAGATGCAAATATTT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTCTGATAACAGTTCTGTaGGTATTTAACAGAGCTAAT +
Preference number: 2 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICLITVL*VFNRAN
Trigger: ATTAGCTCTGTTAAATACCCACAGAACTGTTATCAG...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CAA 90 bp CACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCTTGTCATTGCCTTGCTaGATTTCCTCCGCTGTCCGG +
Preference number: 3 (lower is better)
Translates to: HCTYMKTRPPVKPMATTTLSLPC*ISSAVR
Trigger: CCGGACAGCGGAGGAAATCAAGCAAGGCAATGACAA...GGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATGTACGTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTGGGCTCCTGGGCATTaGGTCTGTTTGTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHWAPGH*VCLFFS
Trigger: GGAGAAAAACAAACAGACCAAATGCCCAGGAGCCCA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CAA 90 bp TGGCTGAGGGCTAGAAAGATATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATCATTCAAGGACACCATaGTCATTGCCTTGCTTGATT +
Preference number: 3 (lower is better)
Translates to: WLRARKIFFGEETPNRFHHSRTP*SLPCLI
Trigger: AATCAAGCAAGGCAATGACAATGGTGTCCTTGAATG...ATGGAACCTGTTGGGAGTTTCTTCACCGAAGAATATCTTTCTAGCCCTCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR TCA 72 bp TCTGGGACTATAATCACGTGTAGAAGCAGCGCAGAGTaGGATTTAATGCTGGGGTGTTTTGAAAGACTCCTT +
Preference number: 3 (lower is better)
Translates to: SGTIITCRSSAE*DLMLGCFERLL
Trigger: AAGGAGTCTTTCAAAACACCCCAGCATTAAATCTCACTCTGCGCTGCTTCTACACGTGATTATAGTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CAA 90 bp CCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGACACCATTGTTTTCCTCCTTTCACTaGTGGTCATCTGTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: PMATTTSFVQNGHSRTPLFSSFH*WSSVVS
Trigger: AGAAACTACAGATGACCACAAGTGAAAGGAGGAAAA...CAATGGTGTCCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR TCA 72 bp AAAGTGCATCCATGTGATACCCAGATTTGTGCAGTGTaGTACTCATGCTTTGGTTCTTATGGCCATCATTGC +
Preference number: 3 (lower is better)
Translates to: KVHPCDTQICAV*YSCFGSYGHHC
Trigger: GCAATGATGGCCATAAGAACCAAAGCATGAGTATCACACTGCACAAATCTGGGTATCACATGGATGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR CCA 72 bp TACAAAGACCAAACCACACAGGTGATCGCGATTACGTaGAATGTGACAGAGCAGAATATTTTCCTCCTTTCA +
Preference number: 3 (lower is better)
Translates to: YKDQTTQVIAIT*NVTEQNIFLLS
Trigger: TGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCGATCACCTGTGTGGTTTGGTCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATGGGCTCCTGGGCATTaGGTCTGTTTGTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAWAPGH*VCLFFS
Trigger: GGAGAAAAACAAACAGACCAAATGCCCAGGAGCCCA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTGGGAAGTTAAATATTaGCATCTGTGGCCTGCATTT +
Preference number: 3 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSWEVKY*HLWPAF
Trigger: AAATGCAGGCCACAGATGCAAATATTTAACTTCCCA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR TCA 72 bp CACCTGTTTGTGGTACAGGCACTACCACAGCATCTTTaGTGTCTGTGTTTACATTACATGAGAAGTTCTTCT +
Preference number: 3 (lower is better)
Translates to: HLFVVQALPQHL*CLCLHYMRSSS
Trigger: AGAAGAACTTCTCATGTAATGTAAACACAGACATCAAAGATGCTGTGGTAGTGCCTGTACCACAAACAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
3UTR-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATGGGCTCCTGGGCATTaGGTCTGTTTGTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQWAPGH*VCLFFS
Trigger: GGAGAAAAACAAACAGACCAAATGCCCAGGAGCCCA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CAA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTATCTGTGGCCTGCATTaGTGGCTGTTGTGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: KQHVAITNPQGKWISKKLICGLH*WLLCFY
Trigger: ATAGAAACACAACAGCCACAAATGCAGGCCACAGAT...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTGTGATACTCATGCTTaGGTTCTTATGGCCATCATT +
Preference number: 3 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHCDTHA*VLMAII
Trigger: AATGATGGCCATAAGAACCAAAGCATGAGTATCACA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATATCTGTGGCCTGCATTaGTGGCTGTTGTGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYICGLH*WLLCFY
Trigger: ATAGAAACACAACAGCCACAAATGCAGGCCACAGAT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR-3UTR CAA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTCATCATCTGTCAAGTaGACACCTCATATGGATGAA +
Preference number: 3 (lower is better)
Translates to: KQHVAITNPQGKWISKKLSSSVK*TPHMDE
Trigger: TTCATCCATATGAGGTGTCAACTTGACAGATGATGA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR TCA 72 bp AAAAGCACTGCCACAAAGCTAAATCGTTTTATTGTTTaGAAGGGCAAATGTTCCATTGCCACACAGAATGTA +
Preference number: 3 (lower is better)
Translates to: KSTATKLNRFIV*KGKCSIATQNV
Trigger: TACATTCTGTGTGGCAATGGAACATTTGCCCTTTCAAACAATAAAACGATTTAGCTTTGTGGCAGTGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
3UTR-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCATCATCTGTCAAGTaGACACCTCATATGGATGAA +
Preference number: 3 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSSSVK*TPHMDE
Trigger: TTCATCCATATGAGGTGTCAACTTGACAGATGATGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
3UTR TCA 72 bp TATCAAAATATGCATCCTCCAAGTTCACTTCCAATGTaGCTTAGGGATAATGCAGACAATTTCAGGCTTAAA +
Preference number: 3 (lower is better)
Translates to: YQNMHPPSSLPM*LRDNADNFRLK
Trigger: TTTAAGCCTGAAATTGTCTGCATTATCCCTAAGTCACATTGGAAGTGAACTTGGAGGATGCATATTTTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCCGCCCGCAGGTTGGGTaGCAGCACCCGCCGCGAACC +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSRPQVG*QHPPRT
Trigger: GGTTCGCGGCGGGTGCTGCCACCCAACCTGCGGGCG...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCGCAACTACCCCAGGCTaGGGGCTGGAGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSATTPG*GLEPPP
Trigger: AGGAGGCGGCTCCAGCCCGCAGCCTGGGGTAGTTGC...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATAGGGGTGCGGCTCCGTaGCTAGTACCACGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNRGAAP*LVPRRC
Trigger: ACACCGGCGTGGTACTAGTCACGGAGCCGCACCCCT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATCCAGGGCTGATGCTGTaGCAAGCCCCGCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNPGLML*QAPLGI
Trigger: GATCCCGAGCGGGGCTTGGCACAGCATCAGCCCTGG...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCGCCCAGGAGGGCGGTTaGAGGGAACCGAAATCGGAC +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSAQEGG*REPKSD
Trigger: GTCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGC...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTCCCCAGGCTGCGGGCTaGAGCCGCCTCCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLPQAAG*SRLLSP
Trigger: TGGTGAGAGGAGGCGGCTCCAGCCCGCAGCCTGGGG...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR TCA 90 bp CACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCTCATCCCCTTCGCAGTaGCAGATTCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: HCTYMKTRPPVKPMATTTSSPSQ*QILQMS
Trigger: GGACATCTGCAGAATCTGTCACTGCGAAGGGGATGA...GGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATGTACGTACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp TGTCTGGGCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCAGACAAGACCTCCTGTaGAGCCAATGGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: CLGNFVQRSHGCRPSACARQDLL*SQWLPQ
Trigger: TTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCT...GGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGCCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp CTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTCTTCAGTGAACAGCTATGGCTGGTGGAGGCAGGACTaGTGGACAAAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSLVVICSFSHSSVNSYGWWRQD*WTKRSV
Trigger: GACACTGCGCTTTGTCCACCAGTCCTGCCTCCACCA...GCCATAGCTGTTCACTGAAGAGTGGGAGAAACTACAGATGACCACAAGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCAGGCAGCCCGGCTCTaGCTCGGCTCCCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNQAARL*LGSPVL
Trigger: GAGGACTGGGGAGCCGAGCCAGAGCCGGGCTGCCTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACAGAGAGGCGCCTACTaGGCGAGCCCGCCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQQRGAY*ASPPPA
Trigger: TGCGGGCGGCGGGCTCGCCCAGTAGGCGCCTCTCTG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCAGCGCGCCGCGCACTaGGGATCCGCCAGAAACGGC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNQRAAH*GSARNG
Trigger: GCCGTTTCTGGCGGATCCCCAGTGCGCGGCGCGCTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR TCA 90 bp GCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGACCAAACCACACAGGTaGTCGCGATTACGTGGAATG +
Preference number: 4 (lower is better)
Translates to: AILYKDHTVVGLQPAPQLTKPHR*SRLRGM
Trigger: CATTCCACGTAATCGCGATCACCTGTGTGGTTTGGT...CAGTTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCGGGGTACATTTCCCGTaGGCGCAGGACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLGVHFP*AQDPPG
Trigger: GCCAGGAGGGTCCTGCGCTCACGGGAAATGTACCCC...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp CGCGATTACGTGGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTTGGAGGCAGGACTGGTaGACAAAGCGCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RDYVECDRAEYFPPFTCGWRQDW*TKRSVP
Trigger: TGGGACACTGCGCTTTGTCCACCAGTCCTGCCTCCA...ACCACAAGTGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGAGCCACGCTCCCCAGTaGACCCACCAGGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSHAPQ*THQAKA
Trigger: TGCCTTTGCCTGGTGGGTCCACTGGGGAGCGTGGCT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGCGCAGAGCGGGCGCTaGGGGCCAATAGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLAQSGR*GPIVAT
Trigger: AGTTGCTACTATTGGCCCCCAGCGCCCGCTCTGCGC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACCGTGAGCCTGTGAAGTaGCTGTCATCGACTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHREPVK*LSSTPR
Trigger: GCGCGGAGTCGATGACAGCCACTTCACAGGCTCACG...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp CATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCACAGCTATGGCACACGTaGAATCTGCACAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HEDKTSCEANGYHNQFCPQLWHT*NLHRSV
Trigger: CACAGACCTGTGCAGATTCCACGTGTGCCATAGCTG...TGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTATTTCCGGCGGAGGGTaGAGTAGCTCAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICISGGG*SSSGGR
Trigger: GCGGCCGCCTGAGCTACTTCACCCTCCGCCGGAAAT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTTACCGGCGGAGGGTaGAGTAGCTCAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLTGGG*SSSGGR
Trigger: GCGGCCGCCTGAGCTACTTCACCCTCCGCCGGTAAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR TCA 90 bp TGGCTGAGGGCTAGAAAGATATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATTCTCCCACTCTTCAGTaGACAGCTATGGCACACGTG +
Preference number: 4 (lower is better)
Translates to: WLRARKIFFGEETPNRFHSPTLQ*TAMAHV
Trigger: CACGTGTGCCATAGCTGTTCACTGAAGAGTGGGAGA...ATGGAACCTGTTGGGAGTTTCTTCACCGAAGAATATCTTTCTAGCCCTCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGCGCTTTCCGAGGGGTaGGGCTCCGTGACTAGTACC +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLALSEG*GSVTST
Trigger: GGTACTAGTCACGGAGCCGCACCCCTCGGAAAGCGC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTGGAGGCAGGACTGGTaGACAAAGCGCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNWRQDW*TKRSVP
Trigger: TGGGACACTGCGCTTTGTCCACCAGTCCTGCCTCCA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TGGCTGAGGGCTAGAAAGATATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATAGCTGTCCCTGTTGTTaGGCTGCTTGCCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: WLRARKIFFGEETPNRFHSCPCC*AACLEK
Trigger: TTTCTCCAGGCAAGCAGCCCAACAACAGGGACAGCT...ATGGAACCTGTTGGGAGTTTCTTCACCGAAGAATATCTTTCTAGCCCTCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGTCAGCCAAATCCCCTaGGATCTCGGGTGTTCGCGT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLVSQIP*DLGCSR
Trigger: ACGCGAACACCCGAGATCTCAGGGGATTTGGCTGAC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp CTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTCTTCAGTGAACAGCTATGGCACAGCAGCGTGTATCTaGGCTCTTTATCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: LSLVVICSFSHSSVNSYGTAACI*ALYPLV
Trigger: CACCAGTGGATAAAGAGCTCAGATACACGCTGCTGT...GCCATAGCTGTTCACTGAAGAGTGGGAGAAACTACAGATGACCACAAGTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTCACACTAGGAGCGCGTaGGCCTGTGAAGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLHTRSA*ACEVAV
Trigger: GACAGCCACTTCACAGGCTCACGCGCTCCTAGTGTG...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp CCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGACACCATTGTGTAGGCCTTCAGCCTaGGCCACAACTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: PMATTTSFVQNGHSRTPLCRPSA*ATTEHR
Trigger: TCTATGTTCAGTTGTGGCGCAGGCTGAAGGCCTACA...CAATGGTGTCCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR GCA 90 bp CACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCTGTTGTTGGGCTGCTTaGCTGGAGAAACAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: HCTYMKTRPPVKPMATTTCCWAA*LEKQVR
Trigger: TCTAACTTGTTTCTCCAGGCAAGCAGCCCAACAACA...GGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATGTACGTACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR GCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCCCATCCTTTGTCAGTTaGGGGTGGAGCGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLPSFVS*GWSAPP
Trigger: GGGAGGAGCGCTCCACCCGCAACTGACAAAGGATGG...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATAAGGCACCTGCTGCCTaGCCTCCAGGGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNKAPAA*PPGLML
Trigger: CAGCATCAGCCCTGGAGGGCAGGCAGCAGGTGCCTT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCCAGGCAAAGGCACCTaGTGCCTGCCCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYPGKGT*CLPSRA
Trigger: AGCCCTGGAGGGCAGGCAGCAGGTGCCTTTGCCTGG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATCGGACACAACAGTTaGAGTGAACCCGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSIGHNS*SEPDSG
Trigger: CCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGCCGTTTAGGAGACAGTaGTCGTGTACTAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRPFRRQ*SCTKQK
Trigger: CTTCTGCTTAGTACACGAGCACTGTCTCCTAAACGG...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGGTGGAGGCAGGACTaGTGGACAAAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLWWRQD*WTKRSV
Trigger: GACACTGCGCTTTGTCCACCAGTCCTGCCTCCACCA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp GCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGGTGATCGCGATTACGTaGAATGTGACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AILYKDHTVVGLQPAPQLVIAIT*NVTEQN
Trigger: ATTCTGCTCTGTCACATTCCACGTAATCGCGATCAC...CAGTTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAGGTGGAGGGGCATATTaGCAGGGCTGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAGGGAY*QGCRWP
Trigger: TGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACC...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGAGCGCAGGACCCTCCTaGCGTCTTAAGTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLSAGPS*RLKSQL
Trigger: GAGCTGGGACTTAAGACGCCAGGAGGGTCCTGCGCT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp TGGCTGAGGGCTAGAAAGATATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATATCTGCACAGGTCTGTaGTCACTCTCTGTGCCTAAG +
Preference number: 4 (lower is better)
Translates to: WLRARKIFFGEETPNRFHICTGL*SLSVPK
Trigger: CTTAGGCACAGAGAGTGACCACAGACCTGTGCAGAT...ATGGAACCTGTTGGGAGTTTCTTCACCGAAGAATATCTTTCTAGCCCTCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp CATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCATTCAGTGAACAGCTATaGCACACGTGGAATCTGCAC +
Preference number: 4 (lower is better)
Translates to: HEDKTSCEANGYHNQFCPFSEQL*HTWNLH
Trigger: GTGCAGATTCCACGTGTGCCATAGCTGTTCACTGAA...TGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCGTCAGCCAAATCCCCTaGGATCTCGGGTGTTCGCGT +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLVSQIP*DLGCSR
Trigger: ACGCGAACACCCGAGATCTCAGGGGATTTGGCTGAC...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCCGCAGTGACAGATTCTaGAGATGTCCTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSRSDRF*RCPEWM
Trigger: CATCCACTCAGGACATCTGCAGAATCTGTCACTGCG...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp CTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTCTTCAGTGAACAGCTATGGCCCATTGTCATTGCCTTaGTTGATTTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSLVVICSFSHSSVNSYGPLSLP*LISSAV
Trigger: GACAGCGGAGGAAATCAAGCAAGGCAATGACAATGG...GCCATAGCTGTTCACTGAAGAGTGGGAGAAACTACAGATGACCACAAGTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR GCA 90 bp CGCGATTACGTGGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTTCCCTGTTGTTGGGCTaGTTGCCTGGAGAAACAAGT +
Preference number: 4 (lower is better)
Translates to: RDYVECDRAEYFPPFTCGSLLLG*LPGETS
Trigger: ACTTGTTTCTCCAGGCAAGCAGCCCAACAACAGGGA...ACCACAAGTGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGCATATTGGCAGGGCTaGAGGTGGCCAATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLAYWQG*RWPIPD
Trigger: ATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp CGCGATTACGTGGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTTGCAGATGTCCTGAGTaGATGGACAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: RDYVECDRAEYFPPFTCGCRCPE*MDRQTT
Trigger: GGTTGTCTGTCTGTCCATCCACTCAGGACATCTGCA...ACCACAAGTGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp TGTCTGGGCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCCAGTTTTGTCCAAAATaGCCATTCAAGGACACCATT +
Preference number: 4 (lower is better)
Translates to: CLGNFVQRSHGCRPSACAQFCPK*PFKDTI
Trigger: AATGGTGTCCTTGAATGGCCATTTTGGACAAAACTG...GGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGCCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp CTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTCTTCAGTGAACAGCTATGGCATTTGCACCTGTTTGTaGTACAGGCACTACCACAGC +
Preference number: 4 (lower is better)
Translates to: LSLVVICSFSHSSVNSYGICTCL*YRHYHS
Trigger: GCTGTGGTAGTGCCTGTACCACAAACAGGTGCAAAT...GCCATAGCTGTTCACTGAAGAGTGGGAGAAACTACAGATGACCACAAGTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp GCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGGTTGGGCTGCTTGCCTaGAGAAACAAGTTAGATAAT +
Preference number: 4 (lower is better)
Translates to: AILYKDHTVVGLQPAPQLVGLLA*RNKLDN
Trigger: ATTATCTAACTTGTTTCTCCAGGCAAGCAGCCCAAC...CAGTTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTCAATGTGGAGGTTTGTaGGGCGTCAGCCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLQCGGL*GVSQIP
Trigger: GGGGATTTGGCTGACGCCTCACAAACCTCCACATTG...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTCATCCCCTTCGCAGTaGCAGATTCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSSPSQ*QILQMS
Trigger: GGACATCTGCAGAATCTGTCACTGCGAAGGGGATGA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
CDS-3UTR TCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACACAGCAGCGTGTATCTaGGCTCTTTATCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHTAACI*ALYPLV
Trigger: CACCAGTGGATAAAGAGCTCAGATACACGCTGCTGT...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACAGACAAGACCTCCTGTaGAGCCAATGGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHRQDLL*SQWLPQ
Trigger: TTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCT...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAGAGCGCGTGAGCCTGTaGAGTGGCTGTCATCGACTC +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQERVSL*SGCHRL
Trigger: GAGTCGATGACAGCCACTTCACAGGCTCACGCGCTC...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAGCCGCAGGAACACAATaGCATCTCTCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQAAGTQ*HLSPRR
Trigger: CCTCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGC...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATCGCAGTGACAGATTCTaGAGATGTCCTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNRSDRF*RCPEWM
Trigger: CATCCACTCAGGACATCTGCAGAATCTGTCACTGCG...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCCATCCTTTGTCAGTTaGGGGTGGAGCGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYPSFVS*GWSAPP
Trigger: GGGAGGAGCGCTCCACCCGCAACTGACAAAGGATGG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp CCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGACACCATTGTGTGGTCACTCTCTGTaGCTAAGTGATCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PMATTTSFVQNGHSRTPLCGHSL*LSDHSL
Trigger: AAGGCTATGATCACTTAGGCACAGAGAGTGACCACA...CAATGGTGTCCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTGCAGATGTCCTGAGTaGATGGACAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNCRCPE*MDRQTT
Trigger: GGTTGTCTGTCTGTCCATCCACTCAGGACATCTGCA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTGGAGGCAGGACTGGTaGACAAAGCGCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNWRQDW*TKRSVP
Trigger: TGGGACACTGCGCTTTGTCCACCAGTCCTGCCTCCA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTGGTGGAGGCAGGACTaGTGGACAAAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNWWRQD*WTKRSV
Trigger: GACACTGCGCTTTGTCCACCAGTCCTGCCTCCACCA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATTTGCACCTGTTTGTaGTACAGGCACTACCACAGC +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSICTCL*YRHYHS
Trigger: GCTGTGGTAGTGCCTGTACCACAAACAGGTGCAAAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAAGCTCTCAGTCCCGCTaGCCGCAGGAACACAATGAC +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASSQSR*PQEHND
Trigger: GTCATTGTGTTCCTGCGGCCAGCGGGACTGAGAGCT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
3UTR CAA 72 bp AATGGCCATTCAAGGACACCATTGTCATTGCCTTGCTaGATTTCCTCCGCTGTCCGGTCTATCAATACATAC +
Preference number: 4 (lower is better)
Translates to: NGHSRTPLSLPC*ISSAVRSINTY
Trigger: GTATGTATTGATAGACCGGACAGCGGAGGAAATCAAGCAAGGCAATGACAATGGTGTCCTTGAATGGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTTGTTTGGAATTCTGTaGGGGTTACGGGCTATCGCT +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNLFGIL*GLRAIA
Trigger: AGCGATAGCCCGTAACCCTCACAGAATTCCAAACAA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCAATGTGGAGGTTTGTaGGGCGTCAGCCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNQCGGL*GVSQIP
Trigger: GGGGATTTGGCTGACGCCTCACAAACCTCCACATTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCTGTCATTGCCTTGCTTaGTTTCCTCCGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLCHCLA*FPPLSG
Trigger: ACCGGACAGCGGAGGAAATCAAGCAAGGCAATGACA...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTGTCATTGCCTTGCTTaGTTTCCTCCGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLCHCLA*FPPLSG
Trigger: ACCGGACAGCGGAGGAAATCAAGCAAGGCAATGACA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGCTACCACAGCATCTTTaGTGTCTGTGTTTACATTAC +
Preference number: 4 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRLPQHL*CLCLHY
Trigger: GTAATGTAAACACAGACATCAAAGATGCTGTGGTAG...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp CCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGACACCATTGGTCATTTGTAGTGGCTaGGGGCTAGAAAGATATTCT +
Preference number: 4 (lower is better)
Translates to: PMATTTSFVQNGHSRTPLVICSG*GLERYS
Trigger: AGAATATCTTTCTAGCCCTCAGCCACTACAAATGAC...CAATGGTGTCCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTCTCTTCACTCGCCCTaGGTAGCCCACCTGCACAAT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNSLHSP*VAHLHN
Trigger: ATTGTGCAGGTGGGCTACTCAGGGCGAGTGAAGAGA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCAGGTGGCCAATCCCTaGTTGGATGCCTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLQVANP*LDALSL
Trigger: AAGAGATAAGGCATCCAATCAGGGATTGGCCACCTG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATGTGGCAGGAGGCTTCTaGACAGGGTTATTCACCTGG +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNVAGGF*TGLFTW
Trigger: CCAGGTGAATAACCCTGTTCAGAAGCCTCCTGCCAC...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTCCCTGTTGTTGGGCTaGTTGCCTGGAGAAACAAGT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSLLLG*LPGETS
Trigger: ACTTGTTTCTCCAGGCAAGCAGCCCAACAACAGGGA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR GCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATGCTGGCAGTCTCCCGTaGTGGGATTACGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNAGSLP*WDYGNL
Trigger: CAGATTTCCGTAATCCCAGCACGGGAGACTGCCAGC...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGCAGATGTCCTGAGTaGATGGACAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLCRCPE*MDRQTT
Trigger: GGTTGTCTGTCTGTCCATCCACTCAGGACATCTGCA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATGGAGGCAGGACTGGTaGACAAAGCGCAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQWRQDW*TKRSVP
Trigger: TGGGACACTGCGCTTTGTCCACCAGTCCTGCCTCCA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATGGTGGAGGCAGGACTaGTGGACAAAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQWWRQD*WTKRSV
Trigger: GACACTGCGCTTTGTCCACCAGTCCTGCCTCCACCA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTGGTGGAGGCAGGACTaGTGGACAAAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYWWRQD*WTKRSV
Trigger: GACACTGCGCTTTGTCCACCAGTCCTGCCTCCACCA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTCCTCCTTTCACTTGTaGTCATCTGTAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSSSFHL*SSVVSP
Trigger: GGGAGAAACTACAGATGACCACAAGTGAAAGGAGGA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CGCGATTACGTGGAATGTGACAGAGCAGAATATTTTCCTCCTTTCACTTGTGGTTCCTCCTTTCACTTGTaGTCATCTGTAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RDYVECDRAEYFPPFTCGSSFHL*SSVVSP
Trigger: GGGAGAAACTACAGATGACCACAAGTGAAAGGAGGA...ACCACAAGTGAAAGGAGGAAAATATTCTGCTCTGTCACATTCCACGTAATCGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATATTTGCACCTGTTTGTaGTACAGGCACTACCACAGC +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNICTCL*YRHYHS
Trigger: GCTGTGGTAGTGCCTGTACCACAAACAGGTGCAAAT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTTGTTTGCTGGTGTCTaGATGTTTTTCCCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSLFAGV*MFFPGN
Trigger: ATTCCCGGGGAAAAACATCCAGACACCAGCAAACAA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATGGCAGTCTCCCGTGCTaGGATTACGGAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNGSLPC*DYGNLV
Trigger: CACCAGATTTCCGTAATCCCAGCACGGGAGACTGCC...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCATCCCCTTCGCAGTaGCAGATTCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASSPSQ*QILQMS
Trigger: GGACATCTGCAGAATCTGTCACTGCGAAGGGGATGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCACCAAACCACACAGGTaGTCGCGATTACGTGGAATG +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLTKPHR*SRLRGM
Trigger: CATTCCACGTAATCGCGATCACCTGTGTGGTTTGGT...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTACCAAACCACACAGGTaGTCGCGATTACGTGGAATG +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLTKPHR*SRLRGM
Trigger: CATTCCACGTAATCGCGATCACCTGTGTGGTTTGGT...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATGTCATTGCCTTGCTTaGTTTCCTCCGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKACHCLA*FPPLSG
Trigger: ACCGGACAGCGGAGGAAATCAAGCAAGGCAATGACA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTGTCATTGCCTTGCTTaGTTTCCTCCGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNCHCLA*FPPLSG
Trigger: ACCGGACAGCGGAGGAAATCAAGCAAGGCAATGACA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGAGACAAGACCTCCTGTaGAGCCAATGGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLRQDLL*SQWLPQ
Trigger: TTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTAGACAAGACCTCCTGTaGAGCCAATGGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLRQDLL*SQWLPQ
Trigger: TTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCT...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTTTCCCCTGTTACTGTaGAGAAGAGTATCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHFPLLL*RRVSWV
Trigger: GACCCATGATACTCTTCTTCACAGTAACAGGGGAAA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCAGTTCACTTCCAATGTaGCTTAGGGATAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSSSLPM*LRDNAD
Trigger: GTCTGCATTATCCCTAAGTCACATTGGAAGTGAACT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCGATCATCCTCCACTGTaGAATCAGCCCTGCAACGTA +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLDHPPL*NQPCNV
Trigger: TACGTTGCAGGGCTGATTTCACAGTGGAGGATGATC...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTGATCATCCTCCACTGTaGAATCAGCCCTGCAACGTA +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLDHPPL*NQPCNV
Trigger: TACGTTGCAGGGCTGATTTCACAGTGGAGGATGATC...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATAATGCTGGGGTGTTTTaGAAGACTCCTTCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNNAGVF*KTPSVY
Trigger: GTAGACTGAAGGAGTCTTTCAAAACACCCCAGCATT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCAGAAGCAGCGCAGAGTaGGATTTAATGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLRSSAE*DLMLGC
Trigger: ACACCCCAGCATTAAATCTCACTCTGCGCTGCTTCT...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCCTCCACCTGGGGCTTaGGATTTGAAGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNPPPGA*DLKVKV
Trigger: GACTTTCACCTTCAAATCTCAAGCCCCAGGTGGAGG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTCATCCCCTTCGCAGTaGCAGATTCTGCATACTTCT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSSPSQ*QILHTS
Trigger: AGAAGTATGCAGAATCTGTCACTGCGAAGGGGATGA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCCATTGTCATTGCCTTaGTTGATTTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLPLSLP*LISSAV
Trigger: GACAGCGGAGGAAATCAAGCAAGGCAATGACAATGG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTGTAGGCCTTCAGCCTaGGCCACAACTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLCRPSA*ATTEHR
Trigger: TCTATGTTCAGTTGTGGCGCAGGCTGAAGGCCTACA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTACCCAAGACAAAGGCTaGCCTGTGTCTTCCGTACTC +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICTQDKG*PVSSVL
Trigger: GAGTACGGAAGACACAGGGCAGCCTTTGTCTTGGGT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGATTCACCTGGAGCCCTaGATCATTCATGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLIHLEP*IIHVLA
Trigger: AGCAAGGACATGAATGATGCAGGGCTCCAGGTGAAT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTGTGGCCTGCATTTGTaGCTGTTGTGTTTCTATTGG +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHCGLHL*LLCFYW
Trigger: CCAATAGAAACACAACAGCCACAAATGCAGGCCACA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACGGAATCAAGACTATCTaGACTCAGTGTCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHGIKTI*TQCQPL
Trigger: TAGTGGCTGACACTGAGTCCAGATAGTCTTGATTCC...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATGGAATCAAGACTATCTaGACTCAGTGTCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNGIKTI*TQCQPL
Trigger: TAGTGGCTGACACTGAGTCCAGATAGTCTTGATTCC...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAAGCTGTCCCTGTTGTTaGGCTGCTTGCCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASCPCC*AACLEK
Trigger: TTTCTCCAGGCAAGCAGCCCAACAACAGGGACAGCT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGATTACGGAAATCTGGTaGAGGGGCATATTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLITEIW*RGILAG
Trigger: CCCTGCCAATATGCCCCTCCACCAGATTTCCGTAAT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGGGATTACGGAAATCTaGTGGAGGGGCATATTGGCA +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLGITEI*WRGILA
Trigger: TGCCAATATGCCCCTCCACCAGATTTCCGTAATCCC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
3UTR CAA 72 bp CATCTGTGGCCTGCATTTGTGGCTGTTGTGTTTCTATaGGACAGCACTGTATTAGAGGAACCAGATGAAAAT +
Preference number: 4 (lower is better)
Translates to: HLWPAFVAVVFL*DSTVLEEPDEN
Trigger: ATTTTCATCTGGTTCCTCTAATACAGTGCTGTCCAATAGAAACACAACAGCCACAAATGCAGGCCACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCATCCCCTTCGCAGTaGCAGATTCTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSSPSQ*QILQMS
Trigger: GGACATCTGCAGAATCTGTCACTGCGAAGGGGATGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAACAGCAGCGTGTATCTaGGCTCTTTATCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKATAACI*ALYPLV
Trigger: CACCAGTGGATAAAGAGCTCAGATACACGCTGCTGT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATACAGCAGCGTGTATCTaGGCTCTTTATCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNTAACI*ALYPLV
Trigger: CACCAGTGGATAAAGAGCTCAGATACACGCTGCTGT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAACCAAACCACACAGGTaGTCGCGATTACGTGGAATG +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKATKPHR*SRLRGM
Trigger: CATTCCACGTAATCGCGATCACCTGTGTGGTTTGGT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAAGACAAGACCTCCTGTaGAGCCAATGGCTACCACAA +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKARQDLL*SQWLPQ
Trigger: TTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTTTCCCCTGTTACTGTaGAGAAGAGTATCATGGGTC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLFPLLL*RRVSWV
Trigger: GACCCATGATACTCTTCTTCACAGTAACAGGGGAAA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAAGAAGCAGCGCAGAGTaGGATTTAATGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKARSSAE*DLMLGC
Trigger: ACACCCCAGCATTAAATCTCACTCTGCGCTGCTTCT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATGTGAGGCTGATTGAATaGATGATGTTTGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNVRLIE*MMFAVT
Trigger: AGTGACTGCAAACATCATTCATTCAATCAGCCTCAC...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATACACAACAGTTGCAGTaGACCCGACTCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYTQQLQ*TRLRVE
Trigger: CTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTCCATTGTCATTGCCTTaGTTGATTTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLPLSLP*LISSAV
Trigger: GACAGCGGAGGAAATCAAGCAAGGCAATGACAATGG...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGCCATTGTCATTGCCTTaGTTGATTTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLPLSLP*LISSAV
Trigger: GACAGCGGAGGAAATCAAGCAAGGCAATGACAATGG...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATGTAGGCCTTCAGCCTaGGCCACAACTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKACRPSA*ATTEHR
Trigger: TCTATGTTCAGTTGTGGCGCAGGCTGAAGGCCTACA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTTGTAGGCCTTCAGCCTaGGCCACAACTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICCRPSA*ATTEHR
Trigger: TCTATGTTCAGTTGTGGCGCAGGCTGAAGGCCTACA...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCGGGCAAATGTTCCATTaGCACACAGAATGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSGQMFH*HTECKK
Trigger: CTTTTTACATTCTGTGTGGCAATGGAACATTTGCCC...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATCTTCAGGTTACACATTaGTGTATCTCAGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNLQVTH*CISGCW
Trigger: CCAACAACCTGAGATACAGCAATGTGTAACCTGAAG...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACCTTCAGGTTACACATTaGTGTATCTCAGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHLQVTH*CISGCW
Trigger: CCAACAACCTGAGATACAGCAATGTGTAACCTGAAG...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGTTGTTGGGCTGCTTaGCTGGAGAAACAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLCCWAA*LEKQVR
Trigger: TCTAACTTGTTTCTCCAGGCAAGCAGCCCAACAACA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR GCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATTGAATTTCTCCCATTaGTGGCAGTCTCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKALNFSH*WQSPVL
Trigger: CAGCACGGGAGACTGCCAGCAATGGGAGAAATTCAA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGCATTCATGTCCTTGCTaGCTTCTGGAACTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLHSCPC*LLELPV
Trigger: TACTGGGAGTTCCAGAAGGCAGCAAGGACATGAATG...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATTTTTCATTCAATGTaGAGGTTTGTGAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSIFHSM*RFVRRQ
Trigger: CTGACGCCTCACAAACCTCCACATTGAATGAAAAAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATACTTGCAGATCGCCCTaGGGATTTTTCATTCAATGT +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNTCRSP*GFFIQC
Trigger: ACATTGAATGAAAAATCCCCAGGGCGATCTGCAAGT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTGCAGATGTCCTGAGTaGATGGACAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNCRCPE*MDRQTT
Trigger: GGTTGTCTGTCTGTCCATCCACTCAGGACATCTGCA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTCCTCCTTTCACTTGTaGTCATCTGTAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSSFHL*SSVVSP
Trigger: GGGAGAAACTACAGATGACCACAAGTGAAAGGAGGA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAAATTTCTCCCATTGCTaGCAGTCTCCCGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQNFSHC*QSPVLG
Trigger: TCCCAGCACGGGAGACTGCCAGCAATGGGAGAAATT...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCACTCTCAGAGTTCTTTTaGGGTACATTTCCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKALSEFF*GTFPAE
Trigger: CTCCGCCGGAAATGTACCCCAAAAGAACTCTGAGAG...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTAAAGCTCCCTCCACCTaGGGCTTGAGATTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICKAPST*GLRFEG
Trigger: ACCTTCAAATCTCAAGCCCCAGGTGGAGGGAGCTTT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTTGTTTGGAATTCTGTaGGGGTTACGGGCTATCGCT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNLFGIL*GLRAIA
Trigger: AGCGATAGCCCGTAACCCTCACAGAATTCCAAACAA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAACAGCAGCGTGTATCTaGGCTCTTTATCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQTAACI*ALYPLV
Trigger: CACCAGTGGATAAAGAGCTCAGATACACGCTGCTGT...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATACCAAACCACACAGGTaGTCGCGATTACGTGGAATG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYTKPHR*SRLRGM
Trigger: CATTCCACGTAATCGCGATCACCTGTGTGGTTTGGT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTCAAGTCTGTATTCTTaGACTTTTCCCCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNSSLYS*TFPLLL
Trigger: CAGTAACAGGGGAAAAGTTCAAGAATACAGACTTGA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGAGTTCACTTCCAATGTaGCTTAGGGATAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSSLPM*LRDNAD
Trigger: GTCTGCATTATCCCTAAGTCACATTGGAAGTGAACT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTTTTCCTATGATCTGTaGAGAACAAGCACACTGATA +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSFSYDL*RTSTLI
Trigger: TATCAGTGTGCTTGTTCTTCACAGATCATAGGAAAA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACAGCAAAATCAAGTGTTaGCTTTTAACCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHSKIKC*LLTCQE
Trigger: TTCCTGGCAGGTTAAAAGTCAACACTTGATTTTGCT...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAATTTCAGAGGACCCTTaGGTCAGAGAAGGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAISEDP*VREGLH
Trigger: ATGCAACCCTTCTCTGACTCAAGGGTCCTCTGAAAT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACGCAGTGACAGATTCTaGAGATGTCCTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQRSDRF*RCPEWM
Trigger: CATCCACTCAGGACATCTGCAGAATCTGTCACTGCG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTGTAGGCCTTCAGCCTaGGCCACAACTGAACATAGA +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYCRPSA*ATTEHR
Trigger: TCTATGTTCAGTTGTGGCGCAGGCTGAAGGCCTACA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCAATCCCTGATTGGATaGCTTATCTCTTCACTCGCC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNQSLIG*LISSLA
Trigger: GGCGAGTGAAGAGATAAGGCATCCAATCAGGGATTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGCAAGATGGCAGATCTaGAGATGTCCTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYARWQI*RCPEWM
Trigger: CATCCACTCAGGACATCTGCAGATCTGCCATCTTGC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCACATCATTCATGTCCTTaGTGCCTTCTGGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAHHSCP*CLLELP
Trigger: TGGGAGTTCCAGAAGGCAGCAAGGACATGAATGATG...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCTGTTCGCGTGTTGTTTaGAATTCTGTGAGGGTTACG +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLCSRVV*NSVRVT
Trigger: CGTAACCCTCACAGAATTCCAAACAACACGCGAACA...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTGTGATCGCGATTACGTaGAATGTGACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLVIAIT*NVTEQN
Trigger: ATTCTGCTCTGTCACATTCCACGTAATCGCGATCAC...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCGTGATCGCGATTACGTaGAATGTGACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLVIAIT*NVTEQN
Trigger: ATTCTGCTCTGTCACATTCCACGTAATCGCGATCAC...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTGATCGCGATTACGTaGAATGTGACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLVIAIT*NVTEQN
Trigger: ATTCTGCTCTGTCACATTCCACGTAATCGCGATCAC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACCAGTTTTGTCCAAAATaGCCATTCAAGGACACCATT +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHQFCPK*PFKDTI
Trigger: AATGGTGTCCTTGAATGGCCATTTTGGACAAAACTG...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATATTTGCACCTGTTTGTaGTACAGGCACTACCACAGC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNICTCL*YRHYHS
Trigger: GCTGTGGTAGTGCCTGTACCACAAACAGGTGCAAAT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGTACTTCATGGGCTCCTaGGCATTTGGTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLYFMGS*AFGLFV
Trigger: AACAAACAGACCAAATGCCCAGGAGCCCATGAAGTA...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTACGCTATTACTTCATaGGCTCCTGGGCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNYAITS*APGHLV
Trigger: GACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTGTGGCCTGCATTTGTaGCTGTTGTGTTTCTATTGG +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLCGLHL*LLCFYW
Trigger: CCAATAGAAACACAACAGCCACAAATGCAGGCCACA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTTGGATATGGTGCCATaGTTAAATCACCCACAGATT +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHLDMVP*LNHPQI
Trigger: AATCTGTGGGTGATTTAACCATGGCACCATATCCAA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTGTATCTCAGGTTGTTaGGCTCACTTTAGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSCISGC*AHFSLD
Trigger: ATCTAAACTAAAGTGAGCCCAACAACCTGAGATACA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTTGCTCTTTACCTTTaGATCCCAGATCAACGAGCT +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLVALYL*IPDQRA
Trigger: AGCTCGTTGATCTGGGATCCAAAGGTAAAGAGCAAC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTACAGGGTTATTCACCTaGAGCCCTGCATCATTCATG +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICTGLFT*SPASFM
Trigger: CATGAATGATGCAGGGCTCCAGGTGAATAACCCTGT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATTGTTTGGAATTCTGTaGGGGTTACGGGCTATCGCT +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQLFGIL*GLRAIA
Trigger: AGCGATAGCCCGTAACCCTCACAGAATTCCAAACAA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCCGATTACGTGGAATGTaGCAGAGCAGAATATTTTCC +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLRLRGM*QSRIFS
Trigger: GGAAAATATTCTGCTCTGTCACATTCCACGTAATCG...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCTACCACAGCATCTTTaGTGTCTGTGTTTACATTAC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLLPQHL*CLCLHY
Trigger: GTAATGTAAACACAGACATCAAAGATGCTGTGGTAG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCCAGATTTGTGCAGTGTaGTACTCATGCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLQICAV*YSCFGS
Trigger: AGAACCAAAGCATGAGTATCACACTGCACAAATCTG...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTTTCCCTTTTTCCTATaGTCTGTGAAGAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLFPFFL*SVKNKH
Trigger: GTGCTTGTTCTTCACAGATCATAGGAAAAAGGGAAA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATAATGCTGGGGTGTTTTaGAAGACTCCTTCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNNAGVF*KTPSVY
Trigger: GTAGACTGAAGGAGTCTTTCAAAACACCCCAGCATT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATTTGTTTCTGCCCATTaGATTTCTCCCATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAFVSAH*ISPIAG
Trigger: GCCAGCAATGGGAGAAATTCAATGGGCAGAAACAAA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCCCAGTGAGGCTGATTaGATGAATGATGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNPSEAD*MNDVCS
Trigger: ACTGCAAACATCATTCATTCAATCAGCCTCACTGGG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR GCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACCATTGTCATTGCCTTaGTTGATTTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQPLSLP*LISSAV
Trigger: GACAGCGGAGGAAATCAAGCAAGGCAATGACAATGG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGGGAAGTTAAATATTTaGATCTGTGGCCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLGKLNI*ICGLHL
Trigger: CAAATGCAGGCCACAGATGCAAATATTTAACTTCCC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGAGTCAGAGAAGGGTTaGATTCTTGGTACCTTGTAT +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLESEKG*ILGTLY
Trigger: ATACAAGGTACCAAGAATGCAACCCTTCTCTGACTC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTTGTTCGCGTGTTGTTTaGAATTCTGTGAGGGTTACG +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICCSRVV*NSVRVT
Trigger: CGTAACCCTCACAGAATTCCAAACAACACGCGAACA...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATATTTGCACCTGTTTGTaGTACAGGCACTACCACAGC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYICTCL*YRHYHS
Trigger: GCTGTGGTAGTGCCTGTACCACAAACAGGTGCAAAT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTTACTTCATGGGCTCCTaGGCATTTGGTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICYFMGS*AFGLFV
Trigger: AACAAACAGACCAAATGCCCAGGAGCCCATGAAGTA...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCCTGATAACAGTTCTGTaGGTATTTAACAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSLITVL*VFNRAN
Trigger: ATTAGCTCTGTTAAATACCCACAGAACTGTTATCAG...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTGTGGCCTGCATTTGTaGCTGTTGTGTTTCTATTGG +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNCGLHL*LLCFYW
Trigger: CCAATAGAAACACAACAGCCACAAATGCAGGCCACA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGAAATATTTGCATCTGTaGCCTGCATTTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLKYLHL*PAFVAV
Trigger: AACAGCCACAAATGCAGGCCACAGATGCAAATATTT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATATGCTTTGGTTCTTATaGCCATCATTGCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNMLWFL*PSLPFH
Trigger: ATGAAAAGGCAATGATGGCCATAAGAACCAAAGCAT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTGTATCTCAGGTTGTTaGGCTCACTTTAGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHCISGC*AHFSLD
Trigger: ATCTAAACTAAAGTGAGCCCAACAACCTGAGATACA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCGTTAGGCAAAAATTGTaGAAACCACAACTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSVRQKL*KPQLRF
Trigger: AAACCTTAGTTGTGGTTTCCACAATTTTTGCCTAAC...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274056.11
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTCTCAGAGTTCTTTTaGGGTACATTTCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLSEFF*GTFPVS
Trigger: GCTCACGGGAAATGTACCCCAAAAGAACTCTGAGAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAACATGTCATGCAAGATaGCAGATCTGCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKATCHAR*QICRCP
Trigger: AGGACATCTGCAGATCTGCCATCTTGCATGACATGT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCGATTACGTGGAATGTaGCAGAGCAGAATATTTTCC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNRLRGM*QSRIFS
Trigger: GGAAAATATTCTGCTCTGTCACATTCCACGTAATCG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAGTCATTTGTAGTGGCTaGGGGCTAGAAAGATATTCT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAVICSG*GLERYS
Trigger: AGAATATCTTTCTAGCCCTCAGCCACTACAAATGAC...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATTTCCCCTGTTACTGTaGAGAAGAGTATCATGGGTC +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQFPLLL*RRVSWV
Trigger: GACCCATGATACTCTTCTTCACAGTAACAGGGGAAA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATAGTTCACTTCCAATGTaGCTTAGGGATAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNSSLPM*LRDNAD
Trigger: GTCTGCATTATCCCTAAGTCACATTGGAAGTGAACT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTTTTTGTTTTCTAACTaGGCAAGGGAAATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLFLFSN*AREILS
Trigger: TGACAGGATTTCCCTTGCTCAGTTAGAAAACAAAAA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCACAGATTTGTGCAGTGTaGTACTCATGCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAQICAV*YSCFGS
Trigger: AGAACCAAAGCATGAGTATCACACTGCACAAATCTG...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCCAAGACTTATTCTTaGGACAGTCCCGCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASKTYS*DSPALD
Trigger: ATCTAAAGCGGGACTGTCTCAAGAATAAGTCTTGGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274056.11
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCACAGCAGGACAGTTaGGTATATTCTCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASQQDS*VYSLRV
Trigger: AACTCTGAGAGAATATACTCAACTGTCCTGCTGTGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTCACAGCAGGACAGTTaGGTATATTCTCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNSQQDS*VYSLRV
Trigger: AACTCTGAGAGAATATACTCAACTGTCCTGCTGTGA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTCCCTGTTGTTGGGCTaGTTGCTTTTGAAATGTTAC +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNSLLLG*LLLKCY
Trigger: GTAACATTTCAAAAGCAAGCAGCCCAACAACAGGGA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGGGAAGTTAAATATTTaGATCTGTGGCCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLGKLNI*ICGLHL
Trigger: CAAATGCAGGCCACAGATGCAAATATTTAACTTCCC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCTGATAATTACAAAGTaGATCCATGTGATACCCAGA +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLLIITK*IHVIPR
Trigger: TCTGGGTATCACATGGATGCACTTTGTAATTATCAG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGGGCAAATGTTCCATTaGCACACAGAATGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLGQMFH*HTECKK
Trigger: CTTTTTACATTCTGTGTGGCAATGGAACATTTGCCC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCTTCTGACATGTCATaGAAGATGGCAGATCTGCAG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSSDMS*KMADLQ
Trigger: CTGCAGATCTGCCATCTTGCATGACATGTCAGAAGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTGGGCTCTTCTTTTTaGCTGAATCCAATGACTCTC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLGSSF*LNPMTL
Trigger: GAGAGTCATTGGATTCAGGCAAAAAGAAGAGCCCAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCGCAGTGACAGATTCTaGATACTTCTAAATTATCAG +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLRSDRF*ILLNYQ
Trigger: CTGATAATTTAGAAGTATGCAGAATCTGTCACTGCG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATGTTCGCGTGTTGTTTaGAATTCTGTGAGGGTTACG +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQCSRVV*NSVRVT
Trigger: CGTAACCCTCACAGAATTCCAAACAACACGCGAACA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAACTTGCAGATCGCCCTaGGGATTTTTCATTCAATGT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKATCRSP*GFFIQC
Trigger: ACATTGAATGAAAAATCCCCAGGGCGATCTGCAAGT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATCCTCCTTTCACTTGTaGTCATCTGTAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQSSFHL*SSVVSP
Trigger: GGGAGAAACTACAGATGACCACAAGTGAAAGGAGGA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCCTCCTTTCACTTGTaGTCATCTGTAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSSFHL*SSVVSP
Trigger: GGGAGAAACTACAGATGACCACAAGTGAAAGGAGGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGTGATCGCGATTACGTaGAATGTGACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYVIAIT*NVTEQN
Trigger: ATTCTGCTCTGTCACATTCCACGTAATCGCGATCAC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCCAGTTTTGTCCAAAATaGCCATTCAAGGACACCATT +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLQFCPK*PFKDTI
Trigger: AATGGTGTCCTTGAATGGCCATTTTGGACAAAACTG...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTACTTCATGGGCTCCTaGGCATTTGGTCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYYFMGS*AFGLFV
Trigger: AACAAACAGACCAAATGCCCAGGAGCCCATGAAGTA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTGTGGCCTGCATTTGTaGCTGTTGTGTTTCTATTGG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYCGLHL*LLCFYW
Trigger: CCAATAGAAACACAACAGCCACAAATGCAGGCCACA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTAAATATTTGCATCTGTaGCCTGCATTTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KQHVAITNPQGKWISKKLKYLHL*PAFVAV
Trigger: AACAGCCACAAATGCAGGCCACAGATGCAAATATTT...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGTTGGATATGGTGCCATaGTTAAATCACCCACAGATT +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLLDMVP*LNHPQI
Trigger: AATCTGTGGGTGATTTAACCATGGCACCATATCCAA...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATTGTTTGCTGGTGTCTaGATGTTTTTCCCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQLFAGV*MFFPGN
Trigger: ATTCCCGGGGAAAAACATCCAGACACCAGCAAACAA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCCATTTCTTTGTTTGCTaGTGTCTGGATGTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLHFFVC*CLDVFP
Trigger: GGGAAAAACATCCAGACACCAGCAAACAAAGAAATG...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAGTTGGGCTGCTTGCCTaGAGAAACAAGTTAGATAAT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAVGLLA*RNKLDN
Trigger: ATTATCTAACTTGTTTCTCCAGGCAAGCAGCCCAAC...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR CCA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGTATGTTTTCCTCTGTaGAGATTTAAAGAGCAACTC +
Preference number: 4 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLVCFPL*RFKEQL
Trigger: GAGTTGCTCTTTAAATCTCCACAGAGGAAAACATAC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCGATTACGTGGAATGTaGCAGAGCAGAATATTTTCC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYRLRGM*QSRIFS
Trigger: GGAAAATATTCTGCTCTGTCACATTCCACGTAATCG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCACTACCACAGCATCTTTaGTGTCTGTGTTTACATTAC +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKALPQHL*CLCLHY
Trigger: GTAATGTAAACACAGACATCAAAGATGCTGTGGTAG...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGTCATTTGTAGTGGCTaGGGGCTAGAAAGATATTCT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYVICSG*GLERYS
Trigger: AGAATATCTTTCTAGCCCTCAGCCACTACAAATGAC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCAAGTCTGTATTCTTaGACTTTTCCCCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASSLYS*TFPLLL
Trigger: CAGTAACAGGGGAAAAGTTCAAGAATACAGACTTGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATAGTTCACTTCCAATGTaGCTTAGGGATAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSSLPM*LRDNAD
Trigger: GTCTGCATTATCCCTAAGTCACATTGGAAGTGAACT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGACACCTCATATGGATaGAATAAGCCTTACACATTT +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLDTSYG*NKPYTF
Trigger: AAATGTGTAAGGCTTATTTCATCCATATGAGGTGTC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCATCATCTGTCAAGTTaGCACCTCATATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNHHLSS*HLIWMK
Trigger: TTTCATCCATATGAGGTGTCAACTTGACAGATGATG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCAGATTTGTGCAGTGTaGTACTCATGCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYQICAV*YSCFGS
Trigger: AGAACCAAAGCATGAGTATCACACTGCACAAATCTG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGTTTTCCTATGATCTGTaGAGAACAAGCACACTGATA +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLFSYDL*RTSTLI
Trigger: TATCAGTGTGCTTGTTCTTCACAGATCATAGGAAAA...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATTTCCCTTTTTCCTATaGTCTGTGAAGAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAFPFFL*SVKNKH
Trigger: GTGCTTGTTCTTCACAGATCATAGGAAAAAGGGAAA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATAGCAAAATCAAGTGTTaGCTTTTAACCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNSKIKC*LLTCQE
Trigger: TTCCTGGCAGGTTAAAAGTCAACACTTGATTTTGCT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCTCCTCCTTCTTCTTaGCAGTCTGAATTTAACCTG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSPPSS*QSEFNL
Trigger: CAGGTTAAATTCAGACTGTCAAGAAGAAGGAGGAGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCCTTTGCTCTTCTCATaGTTCCTTGAGGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYPLLFS*FLEDLL
Trigger: TAAGAGATCCTCAAGGAATCATGAGAAGAGCAAAGG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCCCTGTTGTTGGGCTaGTTGCTTTTGAAATGTTAC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSLLLG*LLLKCY
Trigger: GTAACATTTCAAAAGCAAGCAGCCCAACAACAGGGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGCTGATAATTACAAAGTaGATCCATGTGATACCCAGA +
Preference number: 4 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLLIITK*IHVIPR
Trigger: TCTGGGTATCACATGGATGCACTTTGTAATTATCAG...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTCTGTGGTGATATCTaGCTTTGCTCTTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLCGDI*LCSSHD
Trigger: ATCATGAGAAGAGCAAAGGCAGATATCACCACAGAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAACTTGCAGATCGCCCTaGGGATTTTTCATTCAATGT +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQTCRSP*GFFIQC
Trigger: ACATTGAATGAAAAATCCCCAGGGCGATCTGCAAGT...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCAGTTTTGTCCAAAATaGCCATTCAAGGACACCATT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNQFCPK*PFKDTI
Trigger: AATGGTGTCCTTGAATGGCCATTTTGGACAAAACTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCACAGTTTTGTCCAAAATaGCCATTCAAGGACACCATT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAQFCPK*PFKDTI
Trigger: AATGGTGTCCTTGAATGGCCATTTTGGACAAAACTG...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTAAATATTTGCATCTGTaGCCTGCATTTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICKYLHL*PAFVAV
Trigger: AACAGCCACAAATGCAGGCCACAGATGCAAATATTT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAGTGATACTCATGCTTTaGTTCTTATGGCCATCATTG +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAVILML*FLWPSL
Trigger: CAATGATGGCCATAAGAACCAAAGCATGAGTATCAC...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGTGATACTCATGCTTTaGTTCTTATGGCCATCATTG +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICVILML*FLWPSL
Trigger: CAATGATGGCCATAAGAACCAAAGCATGAGTATCAC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
3UTR CAA 72 bp TCATCCTCCACTGTGAAATCAGCCCTGCAACGTATCTaGTTTAGGTTCGTACAGAATTTAAACAATATTTTC +
Preference number: 4 (lower is better)
Translates to: SSSTVKSALQRI*FRFVQNLNNIF
Trigger: GAAAATATTGTTTAAATTCTGTACGAACCTAAACAAGATACGTTGCAGGGCTGATTTCACAGTGGAGGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACTACCACAGCATCTTTaGTGTCTGTGTTTACATTAC +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQLPQHL*CLCLHY
Trigger: GTAATGTAAACACAGACATCAAAGATGCTGTGGTAG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATCAAGTCTGTATTCTTaGACTTTTCCCCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQSSLYS*TFPLLL
Trigger: CAGTAACAGGGGAAAAGTTCAAGAATACAGACTTGA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATGACACCTCATATGGATaGAATAAGCCTTACACATTT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNDTSYG*NKPYTF
Trigger: AAATGTGTAAGGCTTATTTCATCCATATGAGGTGTC...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGACACCTCATATGGATaGAATAAGCCTTACACATTT +
Preference number: 4 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICDTSYG*NKPYTF
Trigger: AAATGTGTAAGGCTTATTTCATCCATATGAGGTGTC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACATCATCTGTCAAGTTaGCACCTCATATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQHHLSS*HLIWMK
Trigger: TTTCATCCATATGAGGTGTCAACTTGACAGATGATG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTTTTTGTTTTCTAACTaGGCAAGGGAAATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNFLFSN*AREILS
Trigger: TGACAGGATTTCCCTTGCTCAGTTAGAAAACAAAAA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCCCTTTTCAATTTCTaGAATTCTCGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASLFNF*NSRLPC
Trigger: ACAAGGAAGTCGAGAATTTCAGAAATTGAAAAGGGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR GCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCTTATTTGTTCTTCTaGAGCATGCTCATATCTCTC +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASYLFF*SMLISL
Trigger: GAGAGATATGAGCATGCTGCAGAAGAACAAATAAGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATATTTTTCATTCAATGTaGAGGTTTGTGAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYIFHSM*RFVRRQ
Trigger: CTGACGCCTCACAAACCTCCACATTGAATGAAAAAT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATATGCTTTGGTTCTTATaGCCATCATTGCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNMLWFL*PSLPFH
Trigger: ATGAAAAGGCAATGATGGCCATAAGAACCAAAGCAT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAATGCTTTGGTTCTTATaGCCATCATTGCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAMLWFL*PSLPFH
Trigger: ATGAAAAGGCAATGATGGCCATAAGAACCAAAGCAT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGACACCTCATATGGATaGAATAAGCCTTACACATTT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYDTSYG*NKPYTF
Trigger: AAATGTGTAAGGCTTATTTCATCCATATGAGGTGTC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR TCA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATTTTTGTTTTCTAACTaGGCAAGGGAAATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQFLFSN*AREILS
Trigger: TGACAGGATTTCCCTTGCTCAGTTAGAAAACAAAAA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTGATAATTACAAAGTaGATCCATGTGATACCCAGA +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLIITK*IHVIPR
Trigger: TCTGGGTATCACATGGATGCACTTTGTAATTATCAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR GCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATACCACAACTAAGGTTTaGGTCACTTGTTTAATATAC +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYTTTKV*VTCLIY
Trigger: GTATATTAAACAAGTGACGCAAACCTTAGTTGTGGT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274056.11
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTGATAACAGTTCTGTaGGTATTTAACAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLITVL*VFNRAN
Trigger: ATTAGCTCTGTTAAATACCCACAGAACTGTTATCAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CCA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATAATGACTCTCATCTGTaGAAGATGAATCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYNDSHL*KMNLKN
Trigger: ATTCTTCAGATTCATCTTCCACAGATGAGAGTCATT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS CCA 90 bp AGGCTGCGGGCTGGAGCCGCCTCCTCTCACCAGAGAGGCGCCTACTaGGCGAGCCCGCCGCCCGCAGGTTGGGTGGCAGCACCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: RLRAGAASSHQRGAY*ASPPPAGWVAAPAA
Trigger: CGCGGCGGGTGCTGCCACCCAACCTGCGGGCGGCGGGCTCGCCCAGTAGGCGCCTCTCTGGTGAGAGGAGGCGGCTCCAGCCCGCAGCCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS CCA 90 bp ACCAGAGAGGCGCCTACTGGGCGAGCCCGCCGCCCGCAGGTTGGGTaGCAGCACCCGCCGCGAACCCCAGCCACGCTCCCCAGTGGACCC +
Preference number: 5 (lower is better)
Translates to: TREAPTGRARRPQVG*QHPPRTPATLPSGP
Trigger: GGGTCCACTGGGGAGCGTGGCTGGGGTTCGCGGCGGGTGCTGCCACCCAACCTGCGGGCGGCGGGCTCGCCCAGTAGGCGCCTCTCTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS CCA 90 bp TCTCACCAGAGAGGCGCCTACTGGGCGAGCCCGCCGCCCGCAGGTTaGGTGGCAGCACCCGCCGCGAACCCCAGCCACGCTCCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: SHQRGAYWASPPPAG*VAAPAANPSHAPQW
Trigger: CCACTGGGGAGCGTGGCTGGGGTTCGCGGCGGGTGCTGCCACCCAACCTGCGGGCGGCGGGCTCGCCCAGTAGGCGCCTCTCTGGTGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS CCA 90 bp GCATCCCGGGGCGCGGGCATTCTCCCATCCTTTGTCAGTTGCGGGTaGAGCGCTCCTCCCCAGCTAGCGGACGAGCAGCCGGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: ASRGAGILPSFVSCG*SAPPQLADEQPGGR
Trigger: CCTGCCACCCGGCTGCTCGTCCGCTAGCTGGGGAGGAGCGCTCCACCCGCAACTGACAAAGGATGGGAGAATGCCCGCGCCCCGGGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS GCA 90 bp AGCCACGCTCCCCAGTGGACCCACCAGGCAAAGGCACCTGCTGCCTaGCCTCCAGGGCTGATGCTGTGCCAAGCCCCGCTCGGGATCAGG +
Preference number: 5 (lower is better)
Translates to: SHAPQWTHQAKAPAA*PPGLMLCQAPLGIR
Trigger: CCTGATCCCGAGCGGGGCTTGGCACAGCATCAGCCCTGGAGGGCAGGCAGCAGGTGCCTTTGCCTGGTGGGTCCACTGGGGAGCGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS TCA 90 bp AAGTGGCTGTCATCGACTCCGCGCTTTCCGAGGGGTGCGGCTCCGTaGCTAGTACCACGCCGGTGTAAACAGCGCGCCGCGCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: KWLSSTPRFPRGAAP*LVPRRCKQRAAHWG
Trigger: TCCCCAGTGCGCGGCGCGCTGTTTACACCGGCGTGGTACTAGTCACGGAGCCGCACCCCTCGGAAAGCGCGGAGTCGATGACAGCCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000515471.5
CDS CCA 90 bp GCGCAGGACCCTCCTGGCGTCTTAAGTCCCAGCTCTCAGTCCCGCTaGCCGCAGGAACACAATGACATCTCTCGCCCAGGAGGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: AQDPPGVLSPSSQSR*PQEHNDISRPGGRL
Trigger: CAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGCCAGCGGGACTGAGAGCTGGGACTTAAGACGCCAGGAGGGTCCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS TCA 90 bp TTGGTAATCGGTCCCCGTCCCCTTCAAGCCCACACTAGGAGCGCGTaGGCCTGTGAAGTGGCTGTCATCGACTCCGCGCTTTCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: LVIGPRPLQAHTRSA*ACEVAVIDSALSEG
Trigger: CCCCTCGGAAAGCGCGGAGTCGATGACAGCCACTTCACAGGCTCACGCGCTCCTAGTGTGGGCTTGAAGGGGACGGGGACCGATTACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS TCA 90 bp CGTCTTAAGTCCCAGCTCTCAGTCCCGCTGGCCGCAGGAACACAATaGCATCTCTCGCCCAGGAGGGCGGTTGCAGGGAACCGAAATCGG +
Preference number: 5 (lower is better)
Translates to: RLKSQLSVPLAAGTQ*HLSPRRAVAGNRNR
Trigger: CCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGCCAGCGGGACTGAGAGCTGGGACTTAAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS GCA 90 bp CGCCCAGGAGGGCGGTTGCAGGGAACCGAAATCGGACACAACAGTTaGAGTGAACCCGACTCAGGGTTGAGCGCATCAGCGCTAAACCCA +
Preference number: 5 (lower is better)
Translates to: RPGGRLQGTEIGHNS*SEPDSGLSASALNP
Trigger: TGGGTTTAGCGCTGATGCGCTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS GCA 90 bp GCTGGCCGCAGGAACACAATGACATCTCTCGCCCAGGAGGGCGGTTaGAGGGAACCGAAATCGGACACAACAGTTGCAGTGAACCCGACT +
Preference number: 5 (lower is better)
Translates to: AGRRNTMTSLAQEGG*REPKSDTTVAVNPT
Trigger: AGTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CCA 90 bp CAGCGTGTATCTGAGCTCTTTATCCACTGGTGGAGGCAGGACTGGTaGACAAAGCGCAGTGTCCCAGTGCAGCGACAGGGTGTGATGAGG +
Preference number: 5 (lower is better)
Translates to: QRVSELFIHWWRQDW*TKRSVPVQRQGVMR
Trigger: CCTCATCACACCCTGTCGCTGCACTGGGACACTGCGCTTTGTCCACCAGTCCTGCCTCCACCAGTGGATAAAGAGCTCAGATACACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000505517.1
ENST00000507270.5
ENST00000510786.1
ENST00000512214.1
ENST00000514618.5
CDS TCA 90 bp AGGAGGGCGGTTGCAGGGAACCGAAATCGGACACAACAGTTGCAGTaGACCCGACTCAGGGTTGAGCGCATCAGCGCTAAACCCAAGACA +
Preference number: 5 (lower is better)
Translates to: RRAVAGNRNRTQQLQ*TRLRVERISAKPKT
Trigger: TGTCTTGGGTTTAGCGCTGATGCGCTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS GCA 90 bp GAGGGGCATATTGGCAGGGCTGCAGGTGGCCAATCCCTGATTGGATaGCTTATCTCTTCACTCGCCCTGAGTAGCCCACCTGCACAATTG +
Preference number: 5 (lower is better)
Translates to: EGHIGRAAGGQSLIG*LISSLALSSPPAQL
Trigger: CAATTGTGCAGGTGGGCTACTCAGGGCGAGTGAAGAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
ENST00000515471.5
CDS CCA 90 bp CAGTCTCCCGTGCTGGGATTACGGAAATCTGGTGGAGGGGCATATTaGCAGGGCTGCAGGTGGCCAATCCCTGATTGGATGCCTTATCTC +
Preference number: 5 (lower is better)
Translates to: QSPVLGLRKSGGGAY*QGCRWPIPDWMPYL
Trigger: GAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCAGATTTCCGTAATCCCAGCACGGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
CDS TCA 90 bp CCCAGGACTACCAGCCGGAGAGAAGGGGCTCCCAGTGAGGCTGATTaGATGAATGATGTTTGCAGTCACTTACCGGCGGAGGGTGAAGTA +
Preference number: 5 (lower is better)
Translates to: PRTTSRREGAPSEAD*MNDVCSHLPAEGEV
Trigger: TACTTCACCCTCCGCCGGTAAGTGACTGCAAACATCATTCATTCAATCAGCCTCACTGGGAGCCCCTTCTCTCCGGCTGGTAGTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS GCA 90 bp GTGCTGGGATTACGGAAATCTGGTGGAGGGGCATATTGGCAGGGCTaGAGGTGGCCAATCCCTGATTGGATGCCTTATCTCTTCACTCGC +
Preference number: 5 (lower is better)
Translates to: VLGLRKSGGGAYWQG*RWPIPDWMPYLFTR
Trigger: GCGAGTGAAGAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCAGATTTCCGTAATCCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
CDS CCA 90 bp GGATTACGGAAATCTGGTGGAGGGGCATATTGGCAGGGCTGCAGGTaGCCAATCCCTGATTGGATGCCTTATCTCTTCACTCGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GLRKSGGGAYWQGCR*PIPDWMPYLFTRPE
Trigger: CTCAGGGCGAGTGAAGAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCAGATTTCCGTAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
CDS CCA 90 bp AGATGTCCTGAGTGGATGGACAGACAGACAACCTTGACTGGCTCCTaGGAGCTGTCCCTGTTGTTGGGCTGCTTGCCTGGAGAAACAAGT +
Preference number: 5 (lower is better)
Translates to: RCPEWMDRQTTLTGS*ELSLLLGCLPGETS
Trigger: ACTTGTTTCTCCAGGCAAGCAGCCCAACAACAGGGACAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTCCATCCACTCAGGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339875.9
ENST00000505517.1
ENST00000510786.1
ENST00000511245.1
CDS-3UTR CAA 90 bp CACTGTACGTACATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCTGGGAGCTGTCCCTGTaGTTGGGCTGCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HCTYMKTRPPVKPMATTTWELSL*LGCLPG
Trigger: TCCAGGCAAGCAGCCCAACAACAGGGACAGCTCCCA...GGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATGTACGTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp GCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCACAACTGGAGCTGTCCCTGTTGTaGGGCTGCTTGCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: AILYKDHTVVGLQPAPQLELSLL*GCLPGE
Trigger: TTCTCCAGGCAAGCAGCCCAACAACAGGGACAGCTC...CAGTTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGGACAGACAGACAACCTaGACTGGCTCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRDRQTT*TGSWEL
Trigger: CAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTC...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCGACAGACAGACAACCTaGACTGGCTCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSDRQTT*TGSWEL
Trigger: CAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTC...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp CATGAAGACAAGACCTCCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCACACTTCCGGAGGGGTTaGAGCTTGGTCTCCATTATG +
Preference number: 5 (lower is better)
Translates to: HEDKTSCEANGYHNQFCPHFRRG*SLVSIM
Trigger: CATAATGGAGACCAAGCTCAAACCCCTCCGGAAGTG...TGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGGAGGTCTTGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGTGGTGGAGGGGCATATaGGCAGGGCTGCAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLWWRGI*AGLQVA
Trigger: GGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCA...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATACTCAGCGCTCTCCTTaGGTAATCGGTCCCCGTCCC +
Preference number: 5 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNTQRSP*VIGPRP
Trigger: GGGACGGGGACCGATTACCAAAGGAGAGCGCTGAGT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS GCA 90 bp GAACAGGGTTATTCACCTGGAGCCCTGCATCATTCATGTCCTTGCTaGCTTCTGGAACTCCCAGTATTTCAGTGCTGGAATCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: EQGYSPGALHHSCPC*LLELPVFQCWNLFL
Trigger: CAGAAACAGATTCCAGCACTGAAATACTGGGAGTTCCAGAAGGCAGCAAGGACATGAATGATGCAGGGCTCCAGGTGAATAACCCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCTGGGCAATTTTGTACAAAGATCACACGGTTGTAGGCCTTCAGCCTGCGCCATTATGAAGTCATACTaGCAGAGCTCACAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: CLGNFVQRSHGCRPSACAIMKSY*QSSQQR
Trigger: ACGCTGCTGTGAGCTCTGCAAGTATGACTTCATAAT...GGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTACAAAATTGCCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp CTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTCTTCAGTGAACAGCTATGGCTTGTCATTGCCTTGCTaGATTTCCTCCGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: LSLVVICSFSHSSVNSYGLSLPC*ISSAVR
Trigger: CCGGACAGCGGAGGAAATCAAGCAAGGCAATGACAA...GCCATAGCTGTTCACTGAAGAGTGGGAGAAACTACAGATGACCACAAGTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGCCCATCCTTTGTCAGTaGCGGGTGGAGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLPILCQ*RVERSS
Trigger: GGAGGAGCGCTCCACCCGCAACTGACAAAGGATGGG...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATGCATTCTCCCATCCTTaGTCAGTTGCGGGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNAFSHP*SVAGGA
Trigger: CGCTCCACCCGCAACTGACAAAGGATGGGAGAATGC...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS GCA 90 bp TCTGAACAGGGTTATTCACCTGGAGCCCTGCATCATTCATGTCCTTaGTGCCTTCTGGAACTCCCAGTATTTCAGTGCTGGAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: SEQGYSPGALHHSCP*CLLELPVFQCWNLF
Trigger: AAACAGATTCCAGCACTGAAATACTGGGAGTTCCAGAAGGCAGCAAGGACATGAATGATGCAGGGCTCCAGGTGAATAACCCTGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CCA 90 bp GACAGATTCTGCATACTTCTAAATTATCAGACCCATCGTCATAGGTaGCAGGAGGCTTCTGAACAGGGTTATTCACCTGGAGCCCTGCAT +
Preference number: 5 (lower is better)
Translates to: DRFCILLNYQTHRHR*QEASEQGYSPGALH
Trigger: ATGCAGGGCTCCAGGTGAATAACCCTGTTCAGAAGCCTCCTGCCACCTATGACGATGGGTCTGATAATTTAGAAGTATGCAGAATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGAACCCGACTCAGGGTaGAGCGCATCAGCGCTAAAC +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLEPDSG*SASALN
Trigger: GTTTAGCGCTGATGCGCTCAACCCTGAGTCGGGTTC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCGCCCAGGAGGGCGGTaGCAGGGAACCGAAATCGGA +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYRPGGR*QGTEIG
Trigger: TCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS TCA 90 bp ATATCTCTCAGAGGCTTTTCTCCTCCTCCTAGGTCTTTGTATTACTaGTTTCTTACCAGACTCCTTCCTAGCAGGGCTCAGCACCATGAC +
Preference number: 5 (lower is better)
Translates to: ISLRGFSPPPRSLYY*FLTRLLPSRAQHHD
Trigger: GTCATGGTGCTGAGCCCTGCTAGGAAGGAGTCTGGTAAGAAATCAGTAATACAAAGACCTAGGAGGAGGAGAAAAGCCTCTGAGAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511245.1
ENST00000514618.5
CDS-3UTR CAA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTTGTCATTGCCTTGCTaGATTTCCTCCGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNLSLPC*ISSAVR
Trigger: CCGGACAGCGGAGGAAATCAAGCAAGGCAATGACAA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TGGCTGAGGGCTAGAAAGATATTCTTCGGTGAAGAAACTCCCAACAGGTTCCATCAGATGGCAGTGAATTaGCACCTGTTTGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: WLRARKIFFGEETPNRFHQMAVN*HLFVVQ
Trigger: CTGTACCACAAACAGGTGCAAATTCACTGCCATCTG...ATGGAACCTGTTGGGAGTTTCTTCACCGAAGAATATCTTTCTAGCCCTCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATGGGAGCTGTCCCTGTaGTTGGGCTGCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAWELSL*LGCLPG
Trigger: TCCAGGCAAGCAGCCCAACAACAGGGACAGCTCCCA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACCCATCCTTTGTCAGTaGCGGGTGGAGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQPILCQ*RVERSS
Trigger: GGAGGAGCGCTCCACCCGCAACTGACAAAGGATGGG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS CCA 90 bp AAAACAAGTCTGCTTTGCAAATGGTCCCTCCCAAACCAATTCCTATaGATACTGTACCTTCCGGAGGGGTTTGAGCTTGGTCTCCATTAT +
Preference number: 5 (lower is better)
Translates to: KTSLLCKWSLPNQFL*ILYLPEGFELGLHY
Trigger: ATAATGGAGACCAAGCTCAAACCCCTCCGGAAGGTACAGTATCCATAGGAATTGGTTTGGGAGGGACCATTTGCAAAGCAGACTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505517.1
ENST00000512214.1
CDS-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACGAGCTGTCCCTGTTGTaGGGCTGCTTGCTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHELSLL*GCLLLK
Trigger: TTTCAAAAGCAAGCAGCCCAACAACAGGGACAGCTC...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTGGGAGCTGTCCCTGTaGTTGGGCTGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: KQHVAITNPQGKWISKKLWELSL*LGCLLL
Trigger: CAAAAGCAAGCAGCCCAACAACAGGGACAGCTCCCA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATGACAGACAGACAACCTaGACTGGCTCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNDRQTT*TGSWEL
Trigger: CAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTC...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGACAGACAGACAACCTaGACTGGCTCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICDRQTT*TGSWEL
Trigger: CAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAGACAGACAGACAACCTaGACTGGCTCCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKADRQTT*TGSWEL
Trigger: CAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTC...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCACTTCCGGAGGGGTTaGAGCTTGGTCTCCATTATG +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLHFRRG*SLVSIM
Trigger: CATAATGGAGACCAAGCTCAAACCCCTCCGGAAGTG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGCATTCAAGGACACCATaGTCATTGCCTTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRHSRTP*SLPCLI
Trigger: AATCAAGCAAGGCAATGACAATGGTGTCCTTGAATG...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp CCTGTGAAGCCAATGGCTACCACAACCAGTTTTGTCCAAAATGGCCATTCAAGGAGTGTCTGGGCAATTTaGTACAAAGATCACACGGTT +
Preference number: 5 (lower is better)
Translates to: PVKPMATTTSFVQNGHSRSVWAI*YKDHTV
Trigger: AACCGTGTGATCTTTGTACAAAATTGCCCAGACACT...CCTTGAATGGCCATTTTGGACAAAACTGGTTGTGGTAGCCATTGGCTTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCCCTCCACCTGGGGCTaGAGATTTGAAGGTGAAAGT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLPSTWG*RFEGES
Trigger: ACTTTCACCTTCAAATCTCAAGCCCCAGGTGGAGGG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGTTACTTGATCGACTaGCAGATCGCCCTGGGGATT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLCYLID*QIALGI
Trigger: AATCCCCAGGGCGATCTGCAAGTCGATCAAGTAACA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGAGCTGTCCCTGTTGTaGGGCTGCTTGCTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLELSLL*GCLLLK
Trigger: TTTCAAAAGCAAGCAGCCCAACAACAGGGACAGCTC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATGGGAGCTGTCCCTGTaGTTGGGCTGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAWELSL*LGCLLL
Trigger: CAAAAGCAAGCAGCCCAACAACAGGGACAGCTCCCA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTTGGGAGCTGTCCCTGTaGTTGGGCTGCTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICWELSL*LGCLLL
Trigger: CAAAAGCAAGCAGCCCAACAACAGGGACAGCTCCCA...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGTTGTCATTGCCTTGCTaGATTTCCTCCGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLLSLPC*ISSAVR
Trigger: CCGGACAGCGGAGGAAATCAAGCAAGGCAATGACAA...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CTTTCACTTGTGGTCATCTGTAGTTTCTCCCACTCTTCAGTGAACAGCTATGGCTTCTTCTCCAGTTTTTaGGCAGTGTCTGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: LSLVVICSFSHSSVNSYGFFSSF*AVSGQF
Trigger: AAATTGCCCAGACACTGCCAAAAAACTGGAGAAGAA...GCCATAGCTGTTCACTGAAGAGTGGGAGAAACTACAGATGACCACAAGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATCTGTGGCCTGCATTaGTGGCTGTTGTGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSICGLH*WLLCFY
Trigger: ATAGAAACACAACAGCCACAAATGCAGGCCACAGAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTCTGTAAGCAGCATGTaGCCATTACTAACCCACAGG +
Preference number: 5 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHSVSSM*PLLTHR
Trigger: CCTGTGGGTTAGTAATGGCAACATGCTGCTTACAGA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAAGAGCTGTCCCTGTTGTaGGGCTGCTTGCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQELSLL*GCLPGE
Trigger: TTCTCCAGGCAAGCAGCCCAACAACAGGGACAGCTC...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGCATTCTCCCATCCTTaGTCAGTTGCGGGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYAFSHP*SVAGGA
Trigger: CGCTCCACCCGCAACTGACAAAGGATGGGAGAATGC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGCATCATTCATGTCCTaGCTGCCTTCTGGAACTCCC +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLASFMS*LPSGTP
Trigger: GGGAGTTCCAGAAGGCAGCAAGGACATGAATGATGC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGTGTTCGCGTGTTGTTaGGAATTCTGTGAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLVFACC*EFCEGY
Trigger: GTAACCCTCACAGAATTCCAAACAACACGCGAACAC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTTGTTACTTGATCGACTaGCAGATCGCCCTGGGGATT +
Preference number: 5 (lower is better)
Translates to: KQHVAITNPQGKWISKKLCYLID*QIALGI
Trigger: AATCCCCAGGGCGATCTGCAAGTCGATCAAGTAACA...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTTGGGCTGCTTGCTTTaGAAATGTTACTTGATCGAC +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSLGCLL*KCYLID
Trigger: GTCGATCAAGTAACATTTCAAAAGCAAGCAGCCCAA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTCACTTCCGGAGGGGTTaGAGCTTGGTCTCCATTATG +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICHFRRG*SLVSIM
Trigger: CATAATGGAGACCAAGCTCAAACCCCTCCGGAAGTG...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCACTTCCGGAGGGGTTaGAGCTTGGTCTCCATTATG +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNHFRRG*SLVSIM
Trigger: CATAATGGAGACCAAGCTCAAACCCCTCCGGAAGTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATTGTCATTGCCTTGCTaGATTTCCTCCGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKALSLPC*ISSAVR
Trigger: CCGGACAGCGGAGGAAATCAAGCAAGGCAATGACAA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCAGATGGCAGTGAATTaGCACCTGTTTGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLQMAVN*HLFVVQ
Trigger: CTGTACCACAAACAGGTGCAAATTCACTGCCATCTG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCTGGGCTCCTGGGCATTaGGTCTGTTTGTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLWAPGH*VCLFFS
Trigger: GGAGAAAAACAAACAGACCAAATGCCCAGGAGCCCA...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCGCTGTTGTGTTTCTATaGGACAGCACTGTATTAGAG +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSAVVFL*DSTVLE
Trigger: CTCTAATACAGTGCTGTCCAATAGAAACACAACAGC...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATATCTGTGGCCTGCATTaGTGGCTGTTGTGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNICGLH*WLLCFY
Trigger: ATAGAAACACAACAGCCACAAATGCAGGCCACAGAT...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATCACAGCAGGACAGTaGAGTATATTCTCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSITAGQ*SIFSQS
Trigger: ACTCTGAGAGAATATACTCAACTGTCCTGCTGTGAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGTTGCTCTTTACCTTaGGATCCCAGATCAACGAGC +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLCCSLP*DPRSTS
Trigger: GCTCGTTGATCTGGGATCCAAAGGTAAAGAGCAACA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGAATTTCAGAGGACCCTaGAGTCAGAGAAGGGTTGCA +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLNFRGP*SQRRVA
Trigger: TGCAACCCTTCTCTGACTCAAGGGTCCTCTGAAATT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS GCA 90 bp CTGTGGAGATTTAAAGAGCAACTCTCACATTCAATCAGCTCTTGTTaGTCTTTACCTTTGGATCCCAGATCAACGAGCTCAATTCCGTTA +
Preference number: 5 (lower is better)
Translates to: LWRFKEQLSHSISSC*SLPLDPRSTSSIPL
Trigger: TAACGGAATTGAGCTCGTTGATCTGGGATCCAAAGGTAAAGAGCAACAAGAGCTGATTGAATGTGAGAGTTGCTCTTTAAATCTCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CCA 90 bp GTCAGAGAAGGGTTGCATTCTTGGTACCTTGTATGTTTTCCTCTGTaGAGATTTAAAGAGCAACTCTCACATTCAATCAGCTCTTGTTGC +
Preference number: 5 (lower is better)
Translates to: VREGLHSWYLVCFPL*RFKEQLSHSISSCC
Trigger: GCAACAAGAGCTGATTGAATGTGAGAGTTGCTCTTTAAATCTCCACAGAGGAAAACATACAAGGTACCAAGAATGCAACCCTTCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTGTTCGCGTGTTGTTaGGAATTCTGTGAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLVFACC*EFCEGY
Trigger: GTAACCCTCACAGAATTCCAAACAACACGCGAACAC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACCTTTTGAAATGTTACTaGATCGACTTGCAGATCGCC +
Preference number: 5 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHLLKCY*IDLQIA
Trigger: GGCGATCTGCAAGTCGATCAAGTAACATTTCAAAAG...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATCTGTTGTTGGGCTGCTaGCTTTTGAAATGTTACTTG +
Preference number: 5 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNLLLGC*LLKCYL
Trigger: CAAGTAACATTTCAAAAGCAAGCAGCCCAACAACAG...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGAGCTGTCCCTGTTGTaGGGCTGCTTGCTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICELSLL*GCLLLK
Trigger: TTTCAAAAGCAAGCAGCCCAACAACAGGGACAGCTC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGATTATGAAGTCATACTaGCAGAGCTCACAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLIMKSY*QSSQQR
Trigger: ACGCTGCTGTGAGCTCTGCAAGTATGACTTCATAAT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACTTCTTCTCCAGTTTTTaGGCAGTGTCTGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHFFSSF*AVSGQF
Trigger: AAATTGCCCAGACACTGCCAAAAAACTGGAGAAGAA...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTGGGCTCCTGGGCATTaGGTCTGTTTGTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNWAPGH*VCLFFS
Trigger: GGAGAAAAACAAACAGACCAAATGCCCAGGAGCCCA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCTGTGATACTCATGCTTaGGTTCTTATGGCCATCATT +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSCDTHA*VLMAII
Trigger: AATGATGGCCATAAGAACCAAAGCATGAGTATCACA...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCTTTGTTTGCTGGTGTCTGGATGTTTTTCCCCGGGAATATCTGTAAGCAGCATTAAGGTTAATCCCTaGGATATGGTGCCATGGTTA +
Preference number: 5 (lower is better)
Translates to: FLCLLVSGCFSPGISVSSIKVNP*DMVPWL
Trigger: TAACCATGGCACCATATCCAAGGGATTAACCTTAAT...GCTGCTTACAGATATTCCCGGGGAAAAACATCCAGACACCAGCAAACAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACATCCAAGACTTATTCTaGAGACAGTCCCGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHIQDLF*RQSRFR
Trigger: TCTAAAGCGGGACTGTCTCAAGAATAAGTCTTGGAT...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274056.11
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGAGCCCACCTGCACAATaGTTCATATCCTTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLSPPAQ*FISLLC
Trigger: GCAAAGCAAGGATATGAACAATTGTGCAGGTGGGCT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTATTGAATTTCTCCCATaGCTGGCAGTCTCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICIEFLP*LAVSRA
Trigger: AGCACGGGAGACTGCCAGCAATGGGAGAAATTCAAT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAGTGTTCGCGTGTTGTTaGGAATTCTGTGAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAVFACC*EFCEGY
Trigger: GTAACCCTCACAGAATTCCAAACAACACGCGAACAC...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGCATTCAAGGACACCATaGTCATTGCCTTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLHSRTP*SLPCLI
Trigger: AATCAAGCAAGGCAATGACAATGGTGTCCTTGAATG...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGAGTGTCTGGGCAATTTaGTACAAAGATCACACGGTT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLSVWAI*YKDHTV
Trigger: AACCGTGTGATCTTTGTACAAAATTGCCCAGACACT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGCTGTTGTGTTTCTATaGGACAGCACTGTATTAGAG +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLAVVFL*DSTVLE
Trigger: CTCTAATACAGTGCTGTCCAATAGAAACACAACAGC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CCAGTTTCAAAATGGGCTTTCTTTAGATGTGGAGGAAACACTGCAGCCCAAAATTGGGAAGTTAAATATTaGCATCTGTGGCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: PVSKWAFFRCGGNTAAQNWEVKY*HLWPAF
Trigger: AAATGCAGGCCACAGATGCAAATATTTAACTTCCCA...ATTTTGGGCTGCAGTGTTTCCTCCACATCTAAAGAAAGCCCATTTTGAAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp CTTAACATTTTCCCCGCATATATACATGACTACACACACGCCATACACACACACGAAATCAACATTTCTTaGTTTGCTGGTGTCTGGATG +
Preference number: 5 (lower is better)
Translates to: LNIFPAYIHDYTHAIHTHEINIS*FAGVWM
Trigger: CATCCAGACACCAGCAAACAAAGAAATGTTGATTTC...GTGTGTGTGTATGGCGTGTGTGTAGTCATGTATATATGCGGGGAAAATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTGCCCTGCAACGTATCTaGTTTAGGTTCGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: KQHVAITNPQGKWISKKLALQRI*FRFVQN
Trigger: ATTCTGTACGAACCTAAACAAGATACGTTGCAGGGC...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTCTCTCAGAGTTCTTTaGGGGTACATTTCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYSLRVL*GYISGG
Trigger: TCCGCCGGAAATGTACCCCAAAAGAACTCTGAGAGA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCCTGGGCTCTTCTTTTaGCCTGAATCCAATGACTCT +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNPGLFF*PESNDS
Trigger: AGAGTCATTGGATTCAGGCAAAAAGAAGAGCCCAGG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS TCA 90 bp GTCCTTGTTTGTATTGTTTACAAGCTGTTCTTCGGTGGCTTTGAGTaGGACACTAACTTTGTATCTGACTCACAGTCTTACCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VLVCIVYKLFFGGFE*DTNFVSDSQSYLSS
Trigger: AGAAGAAAGGTAAGACTGTGAGTCAGATACAAAGTTAGTGTCTCACTCAAAGCCACCGAAGAACAGCTTGTAAACAATACAAACAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGCTGTTGTTGGGCTGCTaGCTTTTGAAATGTTACTTG +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLLLLGC*LLKCYL
Trigger: CAAGTAACATTTCAAAAGCAAGCAGCCCAACAACAG...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATATTATGAAGTCATACTaGCAGAGCTCACAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNIMKSY*QSSQQR
Trigger: ACGCTGCTGTGAGCTCTGCAAGTATGACTTCATAAT...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTATTATGAAGTCATACTaGCAGAGCTCACAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICIMKSY*QSSQQR
Trigger: ACGCTGCTGTGAGCTCTGCAAGTATGACTTCATAAT...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTTTTCCTCCTTTCACTaGTGGTCATCTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLFSSFH*WSSVVS
Trigger: AGAAACTACAGATGACCACAAGTGAAAGGAGGAAAA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCCATTCAAGGACACCATaGTCATTGCCTTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLHSRTP*SLPCLI
Trigger: AATCAAGCAAGGCAATGACAATGGTGTCCTTGAATG...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGCATTCAAGGACACCATaGTCATTGCCTTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLHSRTP*SLPCLI
Trigger: AATCAAGCAAGGCAATGACAATGGTGTCCTTGAATG...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCTTCTTCTCCAGTTTTTaGGCAGTGTCTGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLFFSSF*AVSGQF
Trigger: AAATTGCCCAGACACTGCCAAAAAACTGGAGAAGAA...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCAGATGGCAGTGAATTaGCACCTGTTTGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYQMAVN*HLFVVQ
Trigger: CTGTACCACAAACAGGTGCAAATTCACTGCCATCTG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACAGATGGCAGTGAATTaGCACCTGTTTGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQQMAVN*HLFVVQ
Trigger: CTGTACCACAAACAGGTGCAAATTCACTGCCATCTG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AAGCAGCATGTTGCCATTACTAACCCACAGGGAAAATGGATTAGTAAAAAGCTTGCTGTTGTGTTTCTATaGGACAGCACTGTATTAGAG +
Preference number: 5 (lower is better)
Translates to: KQHVAITNPQGKWISKKLAVVFL*DSTVLE
Trigger: CTCTAATACAGTGCTGTCCAATAGAAACACAACAGC...AAGCTTTTTACTAATCCATTTTCCCTGTGGGTTAGTAATGGCAACATGCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAATCTGTGGCCTGCATTaGTGGCTGTTGTGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAICGLH*WLLCFY
Trigger: ATAGAAACACAACAGCCACAAATGCAGGCCACAGAT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGGGAAGTTAAATATTaGCATCTGTGGCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLWEVKY*HLWPAF
Trigger: AAATGCAGGCCACAGATGCAAATATTTAACTTCCCA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGGTAGGACATCTTTCTTaGACAGGCTACTGTATCTAT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLVGHLS*TGYCIY
Trigger: ATAGATACAGTAGCCTGTCAAAGAAAGATGTCCTAC...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGTGTGATACTCATGCTTaGGTTCTTATGGCCATCATT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLCDTHA*VLMAII
Trigger: AATGATGGCCATAAGAACCAAAGCATGAGTATCACA...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATCTGTAAGCAGCATGTaGCCATTACTAACCCACAGG +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQSVSSM*PLLTHR
Trigger: CCTGTGGGTTAGTAATGGCAACATGCTGCTTACAGA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AAGAACAAGCACACTGATAATTACAAAGTGCATCCATGTGATACCCAGATTTGTGCCCTGCAACGTATCTaGTTTAGGTTCGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: KNKHTDNYKVHPCDTQICALQRI*FRFVQN
Trigger: ATTCTGTACGAACCTAAACAAGATACGTTGCAGGGC...ACAAATCTGGGTATCACATGGATGCACTTTGTAATTATCAGTGTGCTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGAACATGCCTCAAAATTaGCATTCCGTAGAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLNMPQN*HSVEQF
Trigger: AAACTGCTCTACGGAATGCAAATTTTGAGGCATGTT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCCTTCAGGTTACACATaGCTGTATCTCAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNPSGYT*LYLRLL
Trigger: CAACAACCTGAGATACAGCAATGTGTAACCTGAAGG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp ATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTCTGACATTCAATCAGCTCTaGTTGCTCTTTACCTTTGGA +
Preference number: 5 (lower is better)
Translates to: ISYFTLRYYFMGSWAFGLTFNQL*LLFTFG
Trigger: TCCAAAGGTAAAGAGCAACAAGAGCTGATTGAATGT...CAGACCAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCTTTTGAAATGTTACTaGATCGACTTGCAGATCGCC +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNLLKCY*IDLQIA
Trigger: GGCGATCTGCAAGTCGATCAAGTAACATTTCAAAAG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATTGGGCTGCTTGCTTTaGAAATGTTACTTGATCGAC +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKALGCLL*KCYLID
Trigger: GTCGATCAAGTAACATTTCAAAAGCAAGCAGCCCAA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATATTATGAAGTCATACTaGCAGAGCTCACAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYIMKSY*QSSQQR
Trigger: ACGCTGCTGTGAGCTCTGCAAGTATGACTTCATAAT...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAAGTGTCTGGGCAATTTaGTACAAAGATCACACGGTT +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASVWAI*YKDHTV
Trigger: AACCGTGTGATCTTTGTACAAAATTGCCCAGACACT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTTCTTCTCCAGTTTTTaGGCAGTGTCTGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNFFSSF*AVSGQF
Trigger: AAATTGCCCAGACACTGCCAAAAAACTGGAGAAGAA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCTGGGAAGTTAAATATTaGCATCTGTGGCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLWEVKY*HLWPAF
Trigger: AAATGCAGGCCACAGATGCAAATATTTAACTTCCCA...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGTCATCATCTGTCAAGTaGACACCTCATATGGATGAA +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLSSSVK*TPHMDE
Trigger: TTCATCCATATGAGGTGTCAACTTGACAGATGATGA...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp CAAGACTATCTGGACTCAGTGTCAGCCACTACTAATATTTATACCATCTTTCTCGTAGGACATCTTTCTTaGACAGGCTACTGTATCTAT +
Preference number: 5 (lower is better)
Translates to: QDYLDSVSATTNIYTIFLVGHLS*TGYCIY
Trigger: ATAGATACAGTAGCCTGTCAAAGAAAGATGTCCTAC...GAGAAAGATGGTATAAATATTAGTAGTGGCTGACACTGAGTCCAGATAGTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGAACATGCCTCAAAATTaGCATTCCGTAGAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLNMPQN*HSVEQF
Trigger: AAACTGCTCTACGGAATGCAAATTTTGAGGCATGTT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCCTTCAGGTTACACATaGCTGTATCTCAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYPSGYT*LYLRLL
Trigger: CAACAACCTGAGATACAGCAATGTGTAACCTGAAGG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATGGCTGCTGGTCATGTaGCTTATAATGCAGAACAGA +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQWLLVM*LIMQNR
Trigger: TCTGTTCTGCATTATAAGCAACATGACCAGCAGCCA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339875.9
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAATCACAGCAGGACAGTaGAGTATATTCTCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAITAGQ*SIFSQS
Trigger: ACTCTGAGAGAATATACTCAACTGTCCTGCTGTGAT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGGTTCATATCCTTGCTTaGCCAAGCTCAGGTAAAATA +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLVHILA*PSSGKI
Trigger: TATTTTACCTGAGCTTGGCAAAGCAAGGATATGAAC...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATCAATTGTTCATATCCTaGCTTTGCCAAGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNQLFIS*LCQAQV
Trigger: TACCTGAGCTTGGCAAAGCAAGGATATGAACAATTG...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTTTTCTCCCTCTTATTaGTTCTTCTGCAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNFSPSY*FFCSML
Trigger: GAGCATGCTGCAGAAGAACAAATAAGAGGGAGAAAA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGATTTTTCCTAAGACTTaGCAAGAGCTGAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLIFPKT*QELRIS
Trigger: AGAGATCCTCAGCTCTTGCAAAGTCTTAGGAAAAAT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS GCA 90 bp AGCAATCAGATATGTGCTAGAATATTCTTATTTGCATTTCAACTCTaGTCATTCTGGAACTCGTTGTGTTTCTTTCCAGGCAATGTCCTA +
Preference number: 5 (lower is better)
Translates to: SNQICARIFLFAFQL*SFWNSLCFFPGNVL
Trigger: TAGGACATTGCCTGGAAAGAAACACAACGAGTTCCAGAATGAGCAGAGTTGAAATGCAAATAAGAATATTCTAGCACATATCTGATTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAACTTTTGAAATGTTACTaGATCGACTTGCAGATCGCC +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQLLKCY*IDLQIA
Trigger: GGCGATCTGCAAGTCGATCAAGTAACATTTCAAAAG...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTTGGGCTGCTTGCTTTaGAAATGTTACTTGATCGAC +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLGCLL*KCYLID
Trigger: GTCGATCAAGTAACATTTCAAAAGCAAGCAGCCCAA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCTGTTGTTGGGCTGCTaGCTTTTGAAATGTTACTTG +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYLLLGC*LLKCYL
Trigger: CAAGTAACATTTCAAAAGCAAGCAGCCCAACAACAG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATTTTCCTCCTTTCACTaGTGGTCATCTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAFSSFH*WSSVVS
Trigger: AGAAACTACAGATGACCACAAGTGAAAGGAGGAAAA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATTTTTCCTCCTTTCACTaGTGGTCATCTGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNFSSFH*WSSVVS
Trigger: AGAAACTACAGATGACCACAAGTGAAAGGAGGAAAA...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATCATTCAAGGACACCATaGTCATTGCCTTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYHSRTP*SLPCLI
Trigger: AATCAAGCAAGGCAATGACAATGGTGTCCTTGAATG...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATCATCATCTGTCAAGTaGACACCTCATATGGATGAA +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKASSSVK*TPHMDE
Trigger: TTCATCCATATGAGGTGTCAACTTGACAGATGATGA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATGTGATACTCATGCTTaGGTTCTTATGGCCATCATT +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKACDTHA*VLMAII
Trigger: AATGATGGCCATAAGAACCAAAGCATGAGTATCACA...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp TGTCAAAATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCAATTAAGGTTAATCCCTaGGATATGGTGCCATGGTTA +
Preference number: 5 (lower is better)
Translates to: CQNNQTPLNHTNLLAVKAIKVNP*DMVPWL
Trigger: TAACCATGGCACCATATCCAAGGGATTAACCTTAAT...TGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATTTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp GATTACTGCCTAAAAGCATTCATTGCCCCAGTAGTTCTTAATTGTCTTGGAAATGAAATCAACATTTCTTaGTTTGCTGGTGTCTGGATG +
Preference number: 5 (lower is better)
Translates to: DYCLKAFIAPVVLNCLGNEINIS*FAGVWM
Trigger: CATCCAGACACCAGCAAACAAAGAAATGTTGATTTC...ATTTCCAAGACAATTAAGAACTACTGGGGCAATGAATGCTTTTAGGCAGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274056.11
ENST00000503008.5
CDS-3UTR CAA 90 bp TTTCCATATCATACTTTACTTTACGCTATTACTTCATGGGCTCCTGGGCATTTGAAATTCTCGACTTCCTaGTTCTTCTCTTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: FPYHTLLYAITSWAPGHLKFSTS*FFSLFL
Trigger: CAGAAACAAAGAGAAGAACAAGGAAGTCGAGAATTT...CAAATGCCCAGGAGCCCATGAAGTAATAGCGTAAAGTAAAGTATGATATGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514618.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATTGGGAAGTTAAATATTaGCATCTGTGGCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYWEVKY*HLWPAF
Trigger: AAATGCAGGCCACAGATGCAAATATTTAACTTCCCA...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp ACCGTTAATCTAGCTCACTGCAATGTCATTCACACATCAGTTTTACATGAATATGTAGGACATCTTTCTTaGACAGGCTACTGTATCTAT +
Preference number: 5 (lower is better)
Translates to: TVNLAHCNVIHTSVLHEYVGHLS*TGYCIY
Trigger: ATAGATACAGTAGCCTGTCAAAGAAAGATGTCCTAC...ATATTCATGTAAAACTGATGTGTGAATGACATTGCAGTGAGCTAGATTAACGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000339875.9
ENST00000503008.5
ENST00000514618.5
CDS-3UTR CAA 90 bp AATAACCAGACTCCACTAAACCATACAAATCTGTTAGCTGTCAAAGCATATCAATCTGTTAGGCAAAAATaGTGGAAACCACAACTAAGG +
Preference number: 5 (lower is better)
Translates to: NNQTPLNHTNLLAVKAYQSVRQK*WKPQLR
Trigger: CCTTAGTTGTGGTTTCCACAATTTTTGCCTAACAGA...TTGATATGCTTTGACAGCTAACAGATTTGTATGGTTTAGTGGAGTCTGGTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274056.11
CDS CCA 72 bp GCTGGAGCCGCCTCCTCTCACCAGAGAGGCGCCTACTaGGCGAGCCCGCCGCCCGCAGGTTGGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: AGAASSHQRGAY*ASPPPAGWVAA
Trigger: TGCTGCCACCCAACCTGCGGGCGGCGGGCTCGCCCAGTAGGCGCCTCTCTGGTGAGAGGAGGCGGCTCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS CCA 72 bp GATCCGCCAGAAACGGCGCGCGCGCAGAGCGGGCGCTaGGGGCCAATAGTAGCAACTACCCCAGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: DPPETARAQSGR*GPIVATTPGCG
Trigger: CCCGCAGCCTGGGGTAGTTGCTACTATTGGCCCCCAGCGCCCGCTCTGCGCGCGCGCCGTTTCTGGCGGATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS CCA 72 bp CTAGTACCACGCCGGTGTAAACAGCGCGCCGCGCACTaGGGATCCGCCAGAAACGGCGCGCGCGCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: LVPRRCKQRAAH*GSARNGARAER
Trigger: CCGCTCTGCGCGCGCGCCGTTTCTGGCGGATCCCCAGTGCGCGGCGCGCTGTTTACACCGGCGTGGTACTAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS GCA 72 bp CCCCAGTGGACCCACCAGGCAAAGGCACCTGCTGCCTaGCCTCCAGGGCTGATGCTGTGCCAAGCCCCGCTC +
Preference number: 6 (lower is better)
Translates to: PQWTHQAKAPAA*PPGLMLCQAPL
Trigger: GAGCGGGGCTTGGCACAGCATCAGCCCTGGAGGGCAGGCAGCAGGTGCCTTTGCCTGGTGGGTCCACTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS TCA 72 bp TCATCGACTCCGCGCTTTCCGAGGGGTGCGGCTCCGTaGCTAGTACCACGCCGGTGTAAACAGCGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: SSTPRFPRGAAP*LVPRRCKQRAA
Trigger: CGCGGCGCGCTGTTTACACCGGCGTGGTACTAGTCACGGAGCCGCACCCCTCGGAAAGCGCGGAGTCGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000515471.5
CDS TCA 72 bp GGTCCCCGTCCCCTTCAAGCCCACACTAGGAGCGCGTaGGCCTGTGAAGTGGCTGTCATCGACTCCGCGCTT +
Preference number: 6 (lower is better)
Translates to: GPRPLQAHTRSA*ACEVAVIDSAL
Trigger: AAGCGCGGAGTCGATGACAGCCACTTCACAGGCTCACGCGCTCCTAGTGTGGGCTTGAAGGGGACGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS TCA 72 bp TCCCAGCTCTCAGTCCCGCTGGCCGCAGGAACACAATaGCATCTCTCGCCCAGGAGGGCGGTTGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: SQLSVPLAAGTQ*HLSPRRAVAGN
Trigger: GTTCCCTGCAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGCCAGCGGGACTGAGAGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CCA 72 bp TTCAAGCCCACACTAGGAGCGCGTGAGCCTGTGAAGTaGCTGTCATCGACTCCGCGCTTTCCGAGGGGTGCG +
Preference number: 6 (lower is better)
Translates to: FKPTLGAREPVK*LSSTPRFPRGA
Trigger: CGCACCCCTCGGAAAGCGCGGAGTCGATGACAGCCACTTCACAGGCTCACGCGCTCCTAGTGTGGGCTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CCA 72 bp CCTCCTGGCGTCTTAAGTCCCAGCTCTCAGTCCCGCTaGCCGCAGGAACACAATGACATCTCTCGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: PPGVLSPSSQSR*PQEHNDISRPG
Trigger: TCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGCCAGCGGGACTGAGAGCTGGGACTTAAGACGCCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CCA 72 bp TTTTGGGGTACATTTCCCGTGAGCGCAGGACCCTCCTaGCGTCTTAAGTCCCAGCTCTCAGTCCCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: FWGTFPVSAGPS*RLKSQLSVPLA
Trigger: GGCCAGCGGGACTGAGAGCTGGGACTTAAGACGCCAGGAGGGTCCTGCGCTCACGGGAAATGTACCCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000515471.5
CDS CAA 90 bp CCAAGACAAAGGCTGCCCTGTGTCTTCCGTACTCAGCGCTCTCCTTaGGTAATCGGTCCCCGTCCCCTTCAAGCCCACACTAGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: PRQRLPCVFRTQRSP*VIGPRPLQAHTRSA
Trigger: CGCGCTCCTAGTGTGGGCTTGAAGGGGACGGGGACCGATTACCAAAGGAGAGCGCTGAGTACGGAAGACACAGGGCAGCCTTTGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CAA 90 bp CGCTGGCCGCAGGAACACAATGACATCTCTCGCCCAGGAGGGCGGTaGCAGGGAACCGAAATCGGACACAACAGTTGCAGTGAACCCGAC +
Preference number: 6 (lower is better)
Translates to: RWPQEHNDISRPGGR*QGTEIGHNSCSEPD
Trigger: GTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCTGCGGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS GCA 72 bp GGGCGGTTGCAGGGAACCGAAATCGGACACAACAGTTaGAGTGAACCCGACTCAGGGTTGAGCGCATCAGCG +
Preference number: 6 (lower is better)
Translates to: GRLQGTEIGHNS*SEPDSGLSASA
Trigger: CGCTGATGCGCTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CAA 72 bp AGGCTGCCCTGTGTCTTCCGTACTCAGCGCTCTCCTTaGGTAATCGGTCCCCGTCCCCTTCAAGCCCACACT +
Preference number: 6 (lower is better)
Translates to: RLPCVFRTQRSP*VIGPRPLQAHT
Trigger: AGTGTGGGCTTGAAGGGGACGGGGACCGATTACCAAAGGAGAGCGCTGAGTACGGAAGACACAGGGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CCA 72 bp GATTTTGTAAAAGCATCCGTGAGCGCAGGACCCTCCTaGCGTCTTAAGTCCCAGCTCTCAGTCCCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: DFVKASVSAGPS*RLKSQLSVPLA
Trigger: GGCCAGCGGGACTGAGAGCTGGGACTTAAGACGCCAGGAGGGTCCTGCGCTCACGGATGCTTTTACAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510075.1
CDS TCA 72 bp GCCGGAGAGAAGGGGCTCCCAGTGAGGCTGATTGAATaGATGATGTTTGCAGTCACTTACCGGCGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: AGEKGLPVRLIE*MMFAVTYRRRV
Trigger: CACCCTCCGCCGGTAAGTGACTGCAAACATCATTCATTCAATCAGCCTCACTGGGAGCCCCTTCTCTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503008.5
CDS GCA 72 bp ATTGGCAGGGCTGCAGGTGGCCAATCCCTGATTGGATaGCTTATCTCTTCACTCGCCCTGAGTAGCCCACCT +
Preference number: 6 (lower is better)
Translates to: IGRAAGGQSLIG*LISSLALSSPP
Trigger: AGGTGGGCTACTCAGGGCGAGTGAAGAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
ENST00000515471.5
CDS CCA 72 bp GTGCTGGGATTACGGAAATCTGGTGGAGGGGCATATTaGCAGGGCTGCAGGTGGCCAATCCCTGATTGGATG +
Preference number: 6 (lower is better)
Translates to: VLGLRKSGGGAY*QGCRWPIPDWM
Trigger: CATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCAGATTTCCGTAATCCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
CDS CAA 90 bp AGGCGTCAGCCAAATCCCCTGAGATCTCGGGTGTTCGCGTGTTGTTaGGAATTCTGTGAGGGTTACGGGCTATCGCTTCACACCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RRQPNPLRSRVFACC*EFCEGYGLSLHTSP
Trigger: TGGGCTGGTGTGAAGCGATAGCCCGTAACCCTCACAGAATTCCAAACAACACGCGAACACCCGAGATCTCAGGGGATTTGGCTGACGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000503104.5
ENST00000507270.5
ENST00000514618.5
CDS CAA 90 bp GGAACCGAAATCGGACACAACAGTTGCAGTGAACCCGACTCAGGGTaGAGCGCATCAGCGCTAAACCCAAGACAAAGGCTGCCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GTEIGHNSCSEPDSG*SASALNPRQRLPCV
Trigger: GACACAGGGCAGCCTTTGTCTTGGGTTTAGCGCTGATGCGCTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS TCA 72 bp GAGATCTCGGGTGTTCGCGTGTTGTTTGGAATTCTGTaGGGGTTACGGGCTATCGCTTCACACCAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: EISGVRVLFGIL*GLRAIASHQPS
Trigger: GCTGGGCTGGTGTGAAGCGATAGCCCGTAACCCTCACAGAATTCCAAACAACACGCGAACACCCGAGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000503104.5
ENST00000507270.5
ENST00000514618.5
CDS GCA 72 bp AGGAACACAATGACATCTCTCGCCCAGGAGGGCGGTTaGAGGGAACCGAAATCGGACACAACAGTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: RNTMTSLAQEGG*REPKSDTTVAV
Trigger: CACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CAA 72 bp CAGGAACACAATGACATCTCTCGCCCAGGAGGGCGGTaGCAGGGAACCGAAATCGGACACAACAGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: QEHNDISRPGGR*QGTEIGHNSCS
Trigger: ACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAACCGCCCTCCTGGGCGAGAGATGTCATTGTGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS TCA 72 bp GTTGCAGGGAACCGAAATCGGACACAACAGTTGCAGTaGACCCGACTCAGGGTTGAGCGCATCAGCGCTAAA +
Preference number: 6 (lower is better)
Translates to: VAGNRNRTQQLQ*TRLRVERISAK
Trigger: TTTAGCGCTGATGCGCTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGATTTCGGTTCCCTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS GCA 72 bp TTACGGAAATCTGGTGGAGGGGCATATTGGCAGGGCTaGAGGTGGCCAATCCCTGATTGGATGCCTTATCTC +
Preference number: 6 (lower is better)
Translates to: LRKSGGGAYWQG*RWPIPDWMPYL
Trigger: GAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCAGATTTCCGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
CDS CAA 72 bp ATCGGACACAACAGTTGCAGTGAACCCGACTCAGGGTaGAGCGCATCAGCGCTAAACCCAAGACAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: IGHNSCSEPDSG*SASALNPRQRL
Trigger: CAGCCTTTGTCTTGGGTTTAGCGCTGATGCGCTCAACCCTGAGTCGGGTTCACTGCAACTGTTGTGTCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503008.5
ENST00000508725.5
ENST00000510075.1
ENST00000515471.5
CDS CCA 72 bp AAATCTGGTGGAGGGGCATATTGGCAGGGCTGCAGGTaGCCAATCCCTGATTGGATGCCTTATCTCTTCACT +
Preference number: 6 (lower is better)
Translates to: KSGGGAYWQGCR*PIPDWMPYLFT
Trigger: AGTGAAGAGATAAGGCATCCAATCAGGGATTGGCCACCTGCAGCCCTGCCAATATGCCCCTCCACCAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000510696.1
ENST00000514618.5
ENST00000515471.5
CDS CCA 72 bp TTTCTCCCACTCTTCAGTGAACAGCTATGGCACACGTaGAATCTGCACAGGTCTGTGGTCACTCTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: FLPLFSEQLWHT*NLHRSVVTLCA
Trigger: GGCACAGAGAGTGACCACAGACCTGTGCAGATTCCACGTGTGCCATAGCTGTTCACTGAAGAGTGGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510786.1
CDS CAA 72 bp CCAAATCCCCTGAGATCTCGGGTGTTCGCGTGTTGTTaGGAATTCTGTGAGGGTTACGGGCTATCGCTTCAC +
Preference number: 6 (lower is better)
Translates to: PNPLRSRVFACC*EFCEGYGLSLH
Trigger: GTGAAGCGATAGCCCGTAACCCTCACAGAATTCCAAACAACACGCGAACACCCGAGATCTCAGGGGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000503104.5
ENST00000507270.5
ENST00000514618.5
CDS GCA 72 bp GGTTATTCACCTGGAGCCCTGCATCATTCATGTCCTTaGTGCCTTCTGGAACTCCCAGTATTTCAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GYSPGALHHSCP*CLLELPVFQCW
Trigger: CCAGCACTGAAATACTGGGAGTTCCAGAAGGCAGCAAGGACATGAATGATGCAGGGCTCCAGGTGAATAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CCA 72 bp AGCAGGACAGTTGAGTATATTCTCTCAGAGTTCTTTTaGGGTACATTTCCCGTGAGCGCAGGACCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRTVEYILSEFF*GTFPVSAGPSW
Trigger: CCAGGAGGGTCCTGCGCTCACGGGAAATGTACCCCAAAAGAACTCTGAGAGAATATACTCAACTGTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503008.5
ENST00000515471.5
CDS CCA 72 bp CTGCTTTGCAAATGGTCCCTCCCAAACCAATTCCTATaGATACTGTACCTTCCGGAGGGGTTTGAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: LLCKWSLPNQFL*ILYLPEGFELG
Trigger: ACCAAGCTCAAACCCCTCCGGAAGGTACAGTATCCATAGGAATTGGTTTGGGAGGGACCATTTGCAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505517.1
ENST00000512214.1
CDS CAA 72 bp ACAACCTTGACTGGCTCCTGGGAGCTGTCCCTGTTGTaGGGCTGCTTGCTTTTGAAATGTTACTTGATCGAC +
Preference number: 6 (lower is better)
Translates to: TTLTGSWELSLL*GCLLLKCYLID
Trigger: GTCGATCAAGTAACATTTCAAAAGCAAGCAGCCCAACAACAGGGACAGCTCCCAGGAGCCAGTCAAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274056.11
ENST00000503008.5
ENST00000507270.5
ENST00000514618.5
CDS GCA 72 bp TATTCACCTGGAGCCCTGCATCATTCATGTCCTTGCTaGCTTCTGGAACTCCCAGTATTTCAGTGCTGGAAT +
Preference number: 6 (lower is better)
Translates to: YSPGALHHSCPC*LLELPVFQCWN
Trigger: ATTCCAGCACTGAAATACTGGGAGTTCCAGAAGGCAGCAAGGACATGAATGATGCAGGGCTCCAGGTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CAA 90 bp GGATGCCTTATCTCTTCACTCGCCCTGAGTAGCCCACCTGCACAATaGTTCATATCCTTGCTTTGCCAAGCTCAGGTAAAATACAGCAGT +
Preference number: 6 (lower is better)
Translates to: GCLISSLALSSPPAQ*FISLLCQAQVKYSS
Trigger: ACTGCTGTATTTTACCTGAGCTTGGCAAAGCAAGGATATGAACAATTGTGCAGGTGGGCTACTCAGGGCGAGTGAAGAGATAAGGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000514618.5
ENST00000515471.5
CDS GCA 72 bp GTGGAGTACAATGTGCCATTTAACTACTGCAGACAATaGTCAGCATCTGTCCAGCGGATGAAGCAAAGGACA +
Preference number: 6 (lower is better)
Translates to: VEYNVPFNYCRQ*SASVQRMKQRT
Trigger: TGTCCTTTGCTTCATCCGCTGGACAGATGCTGAGCATTGTCTGCAGTAGTTAAATGGCACATTGTACTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 72 bp ATCTCTTCACTCGCCCTGAGTAGCCCACCTGCACAATaGTTCATATCCTTGCTTTGCCAAGCTCAGGTAAAA +
Preference number: 6 (lower is better)
Translates to: ISSLALSSPPAQ*FISLLCQAQVK
Trigger: TTTTACCTGAGCTTGGCAAAGCAAGGATATGAACAATTGTGCAGGTGGGCTACTCAGGGCGAGTGAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503104.5
ENST00000505391.5
ENST00000508725.5
ENST00000514618.5
ENST00000515471.5
CDS CAA 72 bp TTCTTCTCTTTGTTTCTGCCCATTGAATTTCTCCCATaGCTGGCAGTCTCCCGTGCTGGGATTACGGAAATC +
Preference number: 6 (lower is better)
Translates to: FFSLFLPIEFLP*LAVSRAGITEI
Trigger: GATTTCCGTAATCCCAGCACGGGAGACTGCCAGCAATGGGAGAAATTCAATGGGCAGAAACAAAGAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503104.5
ENST00000510696.1
ENST00000514618.5
CDS CAA 72 bp CTGTGTTTCTTGAAGCCCTCACAGGGATGTCTCATTTaGCTCACCAACCAATCTGCCAGCTACAAGTTACCA +
Preference number: 6 (lower is better)
Translates to: LCFLKPSQGCLI*LTNQSASYKLP
Trigger: TGGTAACTTGTAGCTGGCAGATTGGTTGGTGAGCAAAATGAGACATCCCTGTGAGGGCTTCAAGAAACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505391.5
CDS CAA 90 bp AAAGAGCAACTCTCACATTCAATCAGCTCTTGTTGCTCTTTACCTTaGGATCCCAGATCAACGAGCTCAATTCCGTTAGGAGTGGAAGAC +
Preference number: 6 (lower is better)
Translates to: KEQLSHSISSCCSLP*DPRSTSSIPLGVED
Trigger: GTCTTCCACTCCTAACGGAATTGAGCTCGTTGATCTGGGATCCAAAGGTAAAGAGCAACAAGAGCTGATTGAATGTGAGAGTTGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CAA 72 bp ACCCTTGAGTCAGAGAAGGGTTGCATTCTTGGTACCTaGTATGTTTTCCTCTGTGGAGATTTAAAGAGCAAC +
Preference number: 6 (lower is better)
Translates to: TLESEKGCILGT*YVFLCGDLKSN
Trigger: GTTGCTCTTTAAATCTCCACAGAGGAAAACATACAAGGTACCAAGAATGCAACCCTTCTCTGACTCAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CAA 90 bp TTTCAGAGGACCCTTGAGTCAGAGAAGGGTTGCATTCTTGGTACCTaGTATGTTTTCCTCTGTGGAGATTTAAAGAGCAACTCTCACATT +
Preference number: 6 (lower is better)
Translates to: FQRTLESEKGCILGT*YVFLCGDLKSNSHI
Trigger: AATGTGAGAGTTGCTCTTTAAATCTCCACAGAGGAAAACATACAAGGTACCAAGAATGCAACCCTTCTCTGACTCAAGGGTCCTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CCA 72 bp AGCAGGACAGTTGAGTATATTCTCTCAGAGTTCTTTTaGGGTACATTTCCATATCAGAGGGTCTCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: SRTVEYILSEFF*GTFPYQRVSVF
Trigger: AAACACAGAGACCCTCTGATATGGAAATGTACCCCAAAAGAACTCTGAGAGAATATACTCAACTGTCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505391.5
CDS CCA 72 bp GGGTTGCATTCTTGGTACCTTGTATGTTTTCCTCTGTaGAGATTTAAAGAGCAACTCTCACATTCAATCAGC +
Preference number: 6 (lower is better)
Translates to: GLHSWYLVCFPL*RFKEQLSHSIS
Trigger: GCTGATTGAATGTGAGAGTTGCTCTTTAAATCTCCACAGAGGAAAACATACAAGGTACCAAGAATGCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512214.1
ENST00000514618.5
CDS CCA 72 bp AAAAAGCAACTCTGGGATGATTCATTATTTAAACTGTaGTCTTCATACTCTCCCTTGGAAACTGAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: KKQLWDDSLFKL*SSYSPLETEAA
Trigger: GGCTGCCTCAGTTTCCAAGGGAGAGTATGAAGACCACAGTTTAAATAATGAATCATCCCAGAGTTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 90 bp CTCTGGGATGATTCATTATTTAAACTGTGGTCTTCATACTCTCCCTaGGAAACTGAGGCAGCCATATATGTAAGGCTACAGTTAGGCAAA +
Preference number: 6 (lower is better)
Translates to: LWDDSLFKLWSSYSP*ETEAAIYVRLQLGK
Trigger: TTTGCCTAACTGTAGCCTTACATATATGGCTGCCTCAGTTTCCAAGGGAGAGTATGAAGACCACAGTTTAAATAATGAATCATCCCAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS TCA 72 bp TGTATTGTTTACAAGCTGTTCTTCGGTGGCTTTGAGTaGGACACTAACTTTGTATCTGACTCACAGTCTTAC +
Preference number: 6 (lower is better)
Translates to: CIVYKLFFGGFE*DTNFVSDSQSY
Trigger: GTAAGACTGTGAGTCAGATACAAAGTTAGTGTCTCACTCAAAGCCACCGAAGAACAGCTTGTAAACAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 90 bp TCATTGTCCTTGTTTGTATTGTTTACAAGCTGTTCTTCGGTGGCTTaGAGTGAGACACTAACTTTGTATCTGACTCACAGTCTTACCTTT +
Preference number: 6 (lower is better)
Translates to: SLSLFVLFTSCSSVA*SETLTLYLTHSLTF
Trigger: AAAGGTAAGACTGTGAGTCAGATACAAAGTTAGTGTCTCACTCAAAGCCACCGAAGAACAGCTTGTAAACAATACAAACAAGGACAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 90 bp TGCAATGGTCAGCCAGCAATCAGATATGTGCTAGAATATTCTTATTaGCATTTCAACTCTGCTCATTCTGGAACTCGTTGTGTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: CNGQPAIRYVLEYSY*HFNSAHSGTRCVSF
Trigger: GAAAGAAACACAACGAGTTCCAGAATGAGCAGAGTTGAAATGCAAATAAGAATATTCTAGCACATATCTGATTGCTGGCTGACCATTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 72 bp TTGTTTGTATTGTTTACAAGCTGTTCTTCGGTGGCTTaGAGTGAGACACTAACTTTGTATCTGACTCACAGT +
Preference number: 6 (lower is better)
Translates to: LFVLFTSCSSVA*SETLTLYLTHS
Trigger: ACTGTGAGTCAGATACAAAGTTAGTGTCTCACTCAAAGCCACCGAAGAACAGCTTGTAAACAATACAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 72 bp CAGCCAGCAATCAGATATGTGCTAGAATATTCTTATTaGCATTTCAACTCTGCTCATTCTGGAACTCGTTGT +
Preference number: 6 (lower is better)
Translates to: QPAIRYVLEYSY*HFNSAHSGTRC
Trigger: ACAACGAGTTCCAGAATGAGCAGAGTTGAAATGCAAATAAGAATATTCTAGCACATATCTGATTGCTGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 90 bp TTTGATGAGTTGATGTTGTTTAAGGCAATGTATCATGTAACCTTCTaGAGAACTGGCTTCCGTAAGCACAATGCTATCATAGTTCTCATC +
Preference number: 6 (lower is better)
Translates to: FDELMLFKAMYHVTF*RTGFRKHNAIIVLI
Trigger: GATGAGAACTATGATAGCATTGTGCTTACGGAAGCCAGTTCTCAAGAAGGTTACATGATACATTGCCTTAAACAACATCAACTCATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CCA 72 bp AGAATATTCTTATTTGCATTTCAACTCTGCTCATTCTaGAACTCGTTGTGTTTCTTTCCAGGCAATGTCCTA +
Preference number: 6 (lower is better)
Translates to: RIFLFAFQLCSF*NSLCFFPGNVL
Trigger: TAGGACATTGCCTGGAAAGAAACACAACGAGTTCCAGAATGAGCAGAGTTGAAATGCAAATAAGAATATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 72 bp TTGATGTTGTTTAAGGCAATGTATCATGTAACCTTCTaGAGAACTGGCTTCCGTAAGCACAATGCTATCATA +
Preference number: 6 (lower is better)
Translates to: LMLFKAMYHVTF*RTGFRKHNAII
Trigger: TATGATAGCATTGTGCTTACGGAAGCCAGTTCTCAAGAAGGTTACATGATACATTGCCTTAAACAACATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1
CDS CAA 72 bp GAAGTCCAGCTATCAAACATGAATTGTATAAGTTCATaGTCCTTGTTTGTATTGTTTACAAGCTGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: EVQLSNMNCISS*SLFVLFTSCSS
Trigger: CGAAGAACAGCTTGTAAACAATACAAACAAGGACAATGAACTTATACAATTCATGTTTGATAGCTGGACTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512214.1